F236518
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 161 | 143 | 142 | 738 |
Family's Representative Sequence
| Representative Sequence | 3300005577|Ga0068857_100001382|Ga0068857_10000138211 |
| Length | 779 |
| Sequence | MSETSKCPFHNGALSNNGMTNRDWWPKQLKLEILHQHSSKSNPMGEDFNYAKEFNSLDYAALKKDLAALMTDSQPWWPADFGHYGPLFIRMAWHSAGTYRTLDGRGGGGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGRKISWADLMILTGNVALETMGFKTFGFGGGREDTWEPDQDVYWGSEPVWLGGDIRYAHGSEGVEKSGGVTVSDDDANGNTHGRNLQKPLGATQMGLIYVNPEGPDGNPDPAKAAHDIRETFGRMAMNDEETVALIAGGHSFGKTHGAAPTSHVAPEPESAGLEEQGLGWRNSFGTGRGGDTITSGLEVTWTTTPTKWSNNFFENLFKYEWELTKSPAGAQQWVAKGANATIPDAHDPSKKRLPTMLTTDIALRVDPIYEKISRRFLANPAQFADAFARAWFKLTHRDMGPRARYLGPEVPAEELIWQDPIPAVAHKLIDDKDIATLKKKVLASGLTISQLVSTAWASASTFRGSDKRGGANGARIRLSPQKDWAVNQPAQLVKVLNTLEGIRSEFNVAQTGGKKVSLADLIVLAGCAAIEQAARDAGHEVPVPFTPGRTDASQEQTDVESFAFLEPMADGFRNYLKYKSTIPAEHLLIDKAQLLTLAAPEMTVLIGGLRVLNANEGQSQNGVFTKQPGKLTNDFFANLLDMATEWKPMSSDASLFEGRDRSTGAIKWTATRVDLVFGSDSRLRALAEVYGSSDAQKKFVHDFVAAWGKVMNLDRFDLADRGANAFATSGRVSRPGVAPASTPISAQP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2510065045 | Paraburkholderia sprentiae WSM5005 | Isolate | Nodule |
| 2 | 2512047030 | Paraburkholderia tuberum STM678 | Isolate | Nodule |
| 3 | 2515154122 | Paraburkholderia atlantica JPY251 | Isolate | Nodule |
| 4 | 2718217991 | Paraburkholderia sprentiae WSM5005 | Isolate | Nodule |
| 5 | 2818991440 | Luteibacter yeojuensis 583 | Isolate | Unclassified |
| 6 | 2842324504 | Paraburkholderia fungorum SEMIA 4007 | Isolate | Nodule |
| 7 | 2842348783 | Paraburkholderia fungorum SEMIA 4013 | Isolate | Nodule |
| 8 | 2842454564 | Paraburkholderia fungorum SEMIA 4056 | Isolate | Nodule |
| 9 | 2881412998 | Achromobacter aloeverae AVA-1 | Isolate | Unclassified |
| 10 | 2883087390 | Paraburkholderia guartelaensis CNPSo 3008 | Isolate | Unclassified |
| 11 | 2885270888 | Paraburkholderia sp. UYCPa14C | Isolate | Unclassified |
| 12 | 2894414249 | Luteimonas sp. LNNU 24178 | Isolate | Rhizosphere |
| 13 | 2901300506 | Cupriavidus sp. UYMSc13B | Isolate | Unclassified |
| 14 | 2902682994 | Paraburkholderia atlantica CNPSo 3155 | Isolate | Unclassified |
| 15 | 2904463128 | Luteibacter yeojuensis 3191 | Isolate | Unclassified |
| 16 | 2912963787 | Pseudomonas sp. R32 | Isolate | Rhizosphere |
| 17 | 2939651529 | Pseudomonas sp. 2835 | Isolate | Rhizosphere |
| 18 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 19 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 20 | 3300002771 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB | Metagenome | Endosphere |
| 21 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 22 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 23 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 24 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 25 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 26 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 27 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 28 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 29 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 30 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 31 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 32 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 33 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 39 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 40 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 41 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 44 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 45 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 46 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 47 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 48 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 49 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 50 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 58 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 59 | 3300025207 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 65 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 66 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 68 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 70 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 72 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 73 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 75 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 76 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 77 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 93 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 94 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 95 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 96 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 97 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 98 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 99 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 100 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 101 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 102 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 103 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 104 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 105 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 106 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 107 | 3300042013 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 | Metagenome | Rhizosphere |
| 108 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 109 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 126 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 127 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 128 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 129 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 130 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 131 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 132 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 133 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 134 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 136 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 138 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 139 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 142 | 8055431914 | Allorhizobium sonneratiae BGMRC 0089 | Isolate | Unclassified |
| 143 | 8055878733 | Pseudomonas palmensis BBB001 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.96 |
| Metatranscriptomes | 1.24 |
| Isolates | 11.8 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 24.84 |
| Nodule | 4.35 |
| Rhizoplane | 3.11 |
| Rhizosphere | 55.28 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.42 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25162J39368_1000028 | 3300002737 | Bacteria | 221876 |
| 2 | JGI25157J39369_1000537 | 3300002741 | Bacteria | 22779 |
| 3 | JGI25163J39215_1000446 | 3300002771 | Bacteria | 12623 |
| 4 | JGI25164J39214_1000012 | 3300002772 | Bacteria | 255140 |
| 5 | JGI25151J46595_10002389 | 3300003187 | Bacteria | 11371 |
| 6 | JGI25151J46595_10003778 | 3300003187 | Bacteria | 8214 |
| 7 | JGI25165J46597_1000048 | 3300003214 | Bacteria | 254392 |
| 8 | Ga0055538_1000768 | 3300003751 | Bacteria | 9108 |
| 9 | Ga0055535_1000027 | 3300003761 | Bacteria | 202056 |
| 10 | Ga0055542_1000034 | 3300003762 | Bacteria | 231972 |
| 11 | Ga0055529_1000056 | 3300003763 | Bacteria | 196316 |
| 12 | Ga0055526_1000233 | 3300003771 | Bacteria | 46692 |
| 13 | Ga0055526_1008731 | 3300003771 | Bacteria | 4998 |
| 14 | Ga0055526_1011844 | 3300003771 | Bacteria | 3873 |
| 15 | Ga0055537_1004273 | 3300003773 | Bacteria | 4123 |
| 16 | Ga0055524_1005316 | 3300003775 | Bacteria | 5778 |
| 17 | Ga0055536_1000219 | 3300003781 | Bacteria | 46718 |
| 18 | Ga0055534_1001153 | 3300003784 | Bacteria | 11154 |
| 19 | Ga0055534_1002094 | 3300003784 | Bacteria | 7167 |
| 20 | Ga0070658_10001434 | 3300005327 | Bacteria | 20321 |
| 21 | Ga0070670_100057215 | 3300005331 | Bacteria | 3348 |
| 22 | Ga0070661_100000770 | 3300005344 | Bacteria | 23126 |
| 23 | Ga0070659_100010111 | 3300005366 | Bacteria | 6947 |
| 24 | Ga0070708_100027278 | 3300005445 | Bacteria | 4899 |
| 25 | Ga0068867_100000096 | 3300005459 | Bacteria | 56353 |
| 26 | Ga0070706_100022489 | 3300005467 | Bacteria | 5802 |
| 27 | Ga0070698_100006990 | 3300005471 | Bacteria | 12218 |
| 28 | Ga0070698_100013709 | 3300005471 | Bacteria | 8580 |
| 29 | Ga0070665_100000607 | 3300005548 | Bacteria | 49361 |
| 30 | Ga0070664_100000150 | 3300005564 | Bacteria | 48330 |
| 31 | Ga0068857_100001382 | 3300005577 | Bacteria | 19137 |
| 32 | Ga0068862_100044593 | 3300005844 | Bacteria | 3783 |
| 33 | Ga0081455_10004276 | 3300005937 | Bacteria | 16079 |
| 34 | Ga0081540_1001169 | 3300005983 | Bacteria | 23052 |
| 35 | Ga0081540_1007921 | 3300005983 | Bacteria | 7497 |
| 36 | Ga0075365_10013507 | 3300006038 | Bacteria | 4888 |
| 37 | Ga0075364_10015275 | 3300006051 | Bacteria | 4760 |
| 38 | Ga0075432_10007180 | 3300006058 | Bacteria | 3794 |
| 39 | Ga0105240_10000034 | 3300009093 | Bacteria | 278179 |
| 40 | Ga0105240_10000109 | 3300009093 | Bacteria | 171078 |
| 41 | Ga0114129_10109616 | 3300009147 | Bacteria | 3811 |
| 42 | Ga0105243_10002151 | 3300009148 | Bacteria | 16642 |
| 43 | Ga0105237_10031349 | 3300009545 | Bacteria | 5392 |
| 44 | Ga0105239_10067254 | 3300010375 | Bacteria | 3936 |
| 45 | Ga0157374_10003677 | 3300013296 | Bacteria | 12890 |
| 46 | Ga0157377_10000128 | 3300014745 | Bacteria | 48965 |
| 47 | Ga0206349_1625972 | 3300020075 | Bacteria | 2767 |
| 48 | Ga0206354_10481930 | 3300020081 | Bacteria | 2880 |
| 49 | Ga0209760_100424 | 3300025207 | Bacteria | 10089 |
| 50 | Ga0209784_100016 | 3300025224 | Bacteria | 481036 |
| 51 | Ga0207427_100019 | 3300025231 | Bacteria | 513977 |
| 52 | Ga0209437_100054 | 3300025233 | Bacteria | 366715 |
| 53 | Ga0209258_100039 | 3300025242 | Bacteria | 386366 |
| 54 | Ga0209646_1000269 | 3300025246 | Bacteria | 48883 |
| 55 | Ga0209026_1000012 | 3300025250 | Bacteria | 480426 |
| 56 | Ga0209148_1000001 | 3300025254 | Bacteria | 2545271 |
| 57 | Ga0209759_1001389 | 3300025256 | Bacteria | 13914 |
| 58 | Ga0209233_1000002 | 3300025261 | Bacteria | 2501366 |
| 59 | Ga0209565_1000021 | 3300025263 | Bacteria | 406281 |
| 60 | Ga0209455_1000039 | 3300025272 | Bacteria | 437734 |
| 61 | Ga0209673_1000826 | 3300025273 | Bacteria | 40756 |
| 62 | Ga0209675_1000040 | 3300025291 | Bacteria | 247535 |
| 63 | Ga0209675_1000908 | 3300025291 | Bacteria | 18924 |
| 64 | Ga0209676_1000014 | 3300025292 | Bacteria | 793514 |
| 65 | Ga0209025_1000092 | 3300025294 | Bacteria | 247020 |
| 66 | Ga0209025_1016722 | 3300025294 | Bacteria | 4298 |
| 67 | Ga0209564_1000159 | 3300025295 | Bacteria | 164319 |
| 68 | Ga0209564_1000615 | 3300025295 | Bacteria | 54694 |
| 69 | Ga0209564_1001196 | 3300025295 | Bacteria | 29715 |
| 70 | Ga0209256_1000816 | 3300025299 | Bacteria | 39817 |
| 71 | Ga0207697_10022695 | 3300025315 | Bacteria | 2570 |
| 72 | Ga0207705_10023529 | 3300025909 | Bacteria | 4394 |
| 73 | Ga0207695_10000195 | 3300025913 | Bacteria | 171154 |
| 74 | Ga0207671_10003941 | 3300025914 | Bacteria | 14466 |
| 75 | Ga0207693_10008754 | 3300025915 | Bacteria | 8273 |
| 76 | Ga0207649_10000584 | 3300025920 | Bacteria | 24923 |
| 77 | Ga0207690_10038472 | 3300025932 | Bacteria | 3114 |
| 78 | Ga0207679_10000108 | 3300025945 | Bacteria | 68212 |
| 79 | Ga0207703_10006603 | 3300026035 | Bacteria | 9256 |
| 80 | Ga0207641_10016117 | 3300026088 | Bacteria | 6121 |
| 81 | Ga0207648_10000445 | 3300026089 | Bacteria | 45738 |
| 82 | Ga0207674_10009444 | 3300026116 | Bacteria | 11145 |
| 83 | Ga0209371_1000044 | 3300027312 | Bacteria | 327086 |
| 84 | Ga0268266_10002427 | 3300028379 | Bacteria | 20055 |
| 85 | Ga0268266_10023355 | 3300028379 | Bacteria | 5265 |
| 86 | Ga0268265_10029199 | 3300028380 | Bacteria | 3956 |
| 87 | Ga0265338_10000444 | 3300028800 | Bacteria | 73701 |
| 88 | Ga0265338_10008636 | 3300028800 | Bacteria | 12322 |
| 89 | Ga0268256_1000046 | 3300030500 | Bacteria | 327003 |
| 90 | Ga0265328_10001549 | 3300031239 | Bacteria | 10603 |
| 91 | Ga0265320_10001588 | 3300031240 | Bacteria | 16333 |
| 92 | Ga0265329_10012022 | 3300031242 | Bacteria | 3127 |
| 93 | Ga0265316_10035048 | 3300031344 | Bacteria | 4073 |
| 94 | Ga0307509_10000021 | 3300031507 | Bacteria | 250589 |
| 95 | Ga0307509_10000109 | 3300031507 | Bacteria | 117520 |
| 96 | Ga0265314_10002008 | 3300031711 | Bacteria | 21601 |
| 97 | Ga0265314_10007680 | 3300031711 | Bacteria | 9324 |
| 98 | Ga0316583_10000257 | 3300032133 | Bacteria | 14430 |
| 99 | Ga0316574_0008144 | 3300035398 | Bacteria | 5800 |
| 100 | Ga0373937_0011569 | 3300036401 | Bacteria | 7745 |
| 101 | Ga0316584_0029744 | 3300036712 | Bacteria | 4033 |
| 102 | Ga0395905_0096963 | 3300037471 | Bacteria | 2768 |
| 103 | Ga0436364_0188054 | 3300037853 | Bacteria | 3399 |
| 104 | Ga0400487_43483 | 3300039110 | Bacteria | 9135 |
| 105 | Ga0439456_000029 | 3300042013 | Bacteria | 53842 |
| 106 | Ga0451577_0000002 | 3300042876 | Bacteria | 1731375 |
| 107 | Ga0451577_0001385 | 3300042876 | Bacteria | 32460 |
| 108 | Ga0495592_0002129 | 3300046454 | Bacteria | 13955 |
| 109 | Ga0495603_0000855 | 3300046455 | Bacteria | 17436 |
| 110 | Ga0495629_0002544 | 3300046459 | Bacteria | 13985 |
| 111 | Ga0495650_0001481 | 3300046471 | Bacteria | 22487 |
| 112 | Ga0495580_0003876 | 3300046472 | Bacteria | 12664 |
| 113 | Ga0495582_0015047 | 3300046473 | Bacteria | 4254 |
| 114 | Ga0495630_0030485 | 3300046517 | Bacteria | 4012 |
| 115 | Ga0495643_0001027 | 3300046522 | Bacteria | 28449 |
| 116 | Ga0495642_0002014 | 3300046528 | Bacteria | 8473 |
| 117 | Ga0495586_0000157 | 3300046535 | Bacteria | 43987 |
| 118 | Ga0495586_0036997 | 3300046535 | Bacteria | 2620 |
| 119 | Ga0495645_0001018 | 3300046543 | Bacteria | 19074 |
| 120 | Ga0495634_0017075 | 3300046642 | Bacteria | 5185 |
| 121 | Ga0495625_0000116 | 3300046660 | Bacteria | 122740 |
| 122 | Ga0495581_0036811 | 3300047315 | Bacteria | 2831 |
| 123 | Ga0495674_0012664 | 3300047319 | Bacteria | 7949 |
| 124 | Ga0495687_003859 | 3300047443 | Bacteria | 10542 |
| 125 | Ga0496101_0113208 | 3300048904 | Bacteria | 2044 |
| 126 | Ga0496102_0014683 | 3300048905 | Bacteria | 6807 |
| 127 | Ga0496108_0011731 | 3300048911 | Bacteria | 7127 |
| 128 | Ga0496112_0151485 | 3300048915 | Bacteria | 2286 |
| 129 | Ga0496115_0011865 | 3300048918 | Bacteria | 6545 |
| 130 | Ga0496117_0003425 | 3300048920 | Bacteria | 18450 |
| 131 | Ga0496118_0004471 | 3300048921 | Bacteria | 16574 |
| 132 | Ga0496121_0000598 | 3300048924 | Bacteria | 67841 |
| 133 | Ga0496126_0000596 | 3300048929 | Bacteria | 68201 |
| 134 | Ga0501031_0000017 | 3300049568 | Bacteria | 106972 |
| 135 | Ga0501031_0072323 | 3300049568 | Bacteria | 2245 |
| 136 | Ga0501033_0024307 | 3300049570 | Bacteria | 4571 |
| 137 | Ga0501034_0178032 | 3300049571 | Bacteria | 2092 |
| 138 | Ga0501198_000034 | 3300049649 | Bacteria | 54395 |
| 139 | Ga0501222_000035 | 3300049662 | Bacteria | 53956 |
| 140 | Ga0501035_0004009 | 3300049822 | Bacteria | 14049 |
| 141 | Ga0501044_0000275 | 3300049823 | Bacteria | 65642 |
| 142 | nmdc:mga03683_8907_c1 | 3300050489 | Bacteria | 3548 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300048915 | Ga0496112_0151485 | Ga0496112_0151485_456_2264 | 597 |
| 2 | 3300050489 | nmdc:mga03683_8907_c1 | nmdc:mga03683_8907_c1_24_1934 | 626 |
| 3 | 3300049571 | Ga0501034_0178032 | Ga0501034_0178032_34_2031 | 649 |
| 4 | 3300048904 | Ga0496101_0113208 | Ga0496101_0113208_26_2017 | 653 |
| 5 | 3300037853 | Ga0436364_0188054 | Ga0436364_0188054_166_2220 | 681 |
| 6 | 3300005327 | Ga0070658_10001434 | Ga0070658_100014346 | 696 |
| 7 | 3300025909 | Ga0207705_10023529 | Ga0207705_100235293 | 696 |
| 8 | 3300028379 | Ga0268266_10023355 | Ga0268266_100233553 | 698 |
| 9 | 3300005844 | Ga0068862_100044593 | Ga0068862_1000445931 | 699 |
| 10 | 3300028380 | Ga0268265_10029199 | Ga0268265_100291991 | 699 |
| 11 | 3300009545 | Ga0105237_10031349 | Ga0105237_100313492 | 711 |
| 12 | 3300005445 | Ga0070708_100027278 | Ga0070708_1000272783 | 714 |
| 13 | 3300006038 | Ga0075365_10013507 | Ga0075365_100135072 | 714 |
| 14 | 3300006051 | Ga0075364_10015275 | Ga0075364_100152752 | 714 |
| 15 | 3300006058 | Ga0075432_10007180 | Ga0075432_100071803 | 714 |
| 16 | 3300025273 | Ga0209673_1000826 | Ga0209673_100082653 | 714 |
| 17 | 3300028800 | Ga0265338_10008636 | Ga0265338_100086367 | 714 |
| 18 | 3300031239 | Ga0265328_10001549 | Ga0265328_100015492 | 714 |
| 19 | 3300031240 | Ga0265320_10001588 | Ga0265320_100015889 | 714 |
| 20 | 3300031242 | Ga0265329_10012022 | Ga0265329_100120221 | 714 |
| 21 | 3300031711 | Ga0265314_10002008 | Ga0265314_1000200810 | 714 |
| 22 | 3300031711 | Ga0265314_10007680 | Ga0265314_100076803 | 714 |
| 23 | 3300035398 | Ga0316574_0008144 | Ga0316574_0008144_3150_5336 | 714 |
| 24 | 3300036712 | Ga0316584_0029744 | Ga0316584_0029744_411_2597 | 714 |
| 25 | 3300046473 | Ga0495582_0015047 | Ga0495582_0015047_1955_4138 | 714 |
| 26 | 3300046517 | Ga0495630_0030485 | Ga0495630_0030485_655_2838 | 714 |
| 27 | 3300046535 | Ga0495586_0000157 | Ga0495586_0000157_1460_3643 | 714 |
| 28 | 3300046642 | Ga0495634_0017075 | Ga0495634_0017075_128_2311 | 714 |
| 29 | 3300046660 | Ga0495625_0000116 | Ga0495625_0000116_993_3170 | 714 |
| 30 | 3300047319 | Ga0495674_0012664 | Ga0495674_0012664_1631_3814 | 714 |
| 31 | 3300031507 | Ga0307509_10000021 | Ga0307509_1000002126 | 715 |
| 32 | 3300005331 | Ga0070670_100057215 | Ga0070670_1000572152 | 716 |
| 33 | 3300039110 | Ga0400487_43483 | Ga0400487_43483_1371_3536 | 716 |
| 34 | 3300048918 | Ga0496115_0011865 | Ga0496115_0011865_1710_3881 | 716 |
| 35 | 3300005983 | Ga0081540_1007921 | Ga0081540_10079217 | 719 |
| 36 | 3300042876 | Ga0451577_0000002 | Ga0451577_0000002_1413371_1415584 | 720 |
| 37 | 3300049568 | Ga0501031_0072323 | Ga0501031_0072323_26_2203 | 720 |
| 38 | 3300005471 | Ga0070698_100013709 | Ga0070698_1000137093 | 721 |
| 39 | 3300049568 | Ga0501031_0000017 | Ga0501031_0000017_41451_43628 | 721 |
| 40 | 3300049570 | Ga0501033_0024307 | Ga0501033_0024307_467_2644 | 721 |
| 41 | 3300049822 | Ga0501035_0004009 | Ga0501035_0004009_4505_6682 | 721 |
| 42 | 3300049823 | Ga0501044_0000275 | Ga0501044_0000275_54285_56462 | 721 |
| 43 | 3300032133 | Ga0316583_10000257 | Ga0316583_100002571 | 722 |
| 44 | 3300005344 | Ga0070661_100000770 | Ga0070661_1000007706 | 723 |
| 45 | 3300005366 | Ga0070659_100010111 | Ga0070659_1000101114 | 723 |
| 46 | 3300005459 | Ga0068867_100000096 | Ga0068867_10000009633 | 723 |
| 47 | 3300005564 | Ga0070664_100000150 | Ga0070664_10000015030 | 723 |
| 48 | 3300005937 | Ga0081455_10004276 | Ga0081455_100042767 | 723 |
| 49 | 3300009148 | Ga0105243_10002151 | Ga0105243_100021514 | 723 |
| 50 | 3300014745 | Ga0157377_10000128 | Ga0157377_1000012819 | 723 |
| 51 | 3300020075 | Ga0206349_1625972 | Ga0206349_16259722 | 723 |
| 52 | 3300020081 | Ga0206354_10481930 | Ga0206354_104819301 | 723 |
| 53 | 3300025920 | Ga0207649_10000584 | Ga0207649_1000058415 | 723 |
| 54 | 3300025932 | Ga0207690_10038472 | Ga0207690_100384722 | 723 |
| 55 | 3300025945 | Ga0207679_10000108 | Ga0207679_1000010837 | 723 |
| 56 | 3300026089 | Ga0207648_10000445 | Ga0207648_1000044519 | 723 |
| 57 | 3300036401 | Ga0373937_0011569 | Ga0373937_0011569_4207_6408 | 723 |
| 58 | 3300037471 | Ga0395905_0096963 | Ga0395905_0096963_479_2689 | 723 |
| 59 | 3300049649 | Ga0501198_000034 | Ga0501198_000034_17842_20052 | 723 |
| 60 | 3300049662 | Ga0501222_000035 | Ga0501222_000035_33924_36134 | 723 |
| 61 | iso_pu_bacteria | 2901300506 | 2901300684 | 723 |
| 62 | iso_pu_bacteria | 8055431914 | 8055435302 | 723 |
| 63 | 3300009093 | Ga0105240_10000109 | Ga0105240_10000109133 | 724 |
| 64 | 3300010375 | Ga0105239_10067254 | Ga0105239_100672543 | 724 |
| 65 | 3300025913 | Ga0207695_10000195 | Ga0207695_10000195134 | 724 |
| 66 | 3300042876 | Ga0451577_0001385 | Ga0451577_0001385_3981_6272 | 727 |
| 67 | 3300026035 | Ga0207703_10006603 | Ga0207703_100066034 | 735 |
| 68 | 3300031507 | Ga0307509_10000109 | Ga0307509_1000010990 | 735 |
| 69 | 3300005548 | Ga0070665_100000607 | Ga0070665_1000006076 | 736 |
| 70 | 3300028379 | Ga0268266_10002427 | Ga0268266_100024276 | 736 |
| 71 | 3300046522 | Ga0495643_0001027 | Ga0495643_0001027_5367_7646 | 736 |
| 72 | 3300025315 | Ga0207697_10022695 | Ga0207697_100226951 | 737 |
| 73 | 3300025914 | Ga0207671_10003941 | Ga0207671_1000394111 | 737 |
| 74 | 3300027312 | Ga0209371_1000044 | Ga0209371_1000044275 | 737 |
| 75 | 3300030500 | Ga0268256_1000046 | Ga0268256_1000046275 | 737 |
| 76 | 3300048911 | Ga0496108_0011731 | Ga0496108_0011731_818_3070 | 737 |
| 77 | iso_pu_bacteria | 2818991440 | 2819566635 | 739 |
| 78 | iso_pu_bacteria | 2904463128 | 2904467314 | 739 |
| 79 | 3300046455 | Ga0495603_0000855 | Ga0495603_0000855_6240_8495 | 741 |
| 80 | 3300046459 | Ga0495629_0002544 | Ga0495629_0002544_5469_7724 | 741 |
| 81 | 3300046471 | Ga0495650_0001481 | Ga0495650_0001481_13851_16106 | 741 |
| 82 | 3300046472 | Ga0495580_0003876 | Ga0495580_0003876_8407_10662 | 741 |
| 83 | 3300046528 | Ga0495642_0002014 | Ga0495642_0002014_43_2298 | 741 |
| 84 | 3300046535 | Ga0495586_0036997 | Ga0495586_0036997_43_2298 | 741 |
| 85 | 3300046543 | Ga0495645_0001018 | Ga0495645_0001018_6243_8498 | 741 |
| 86 | 3300047315 | Ga0495581_0036811 | Ga0495581_0036811_540_2795 | 741 |
| 87 | 3300003775 | Ga0055524_1005316 | Ga0055524_10053162 | 742 |
| 88 | 3300005467 | Ga0070706_100022489 | Ga0070706_1000224894 | 744 |
| 89 | 3300005471 | Ga0070698_100006990 | Ga0070698_1000069907 | 744 |
| 90 | 3300013296 | Ga0157374_10003677 | Ga0157374_100036772 | 744 |
| 91 | 3300031344 | Ga0265316_10035048 | Ga0265316_100350482 | 744 |
| 92 | iso_pu_bacteria | 2512047030 | 2512345866 | 744 |
| 93 | iso_pu_bacteria | 2515154122 | 2515685181 | 744 |
| 94 | iso_pu_bacteria | 2885270888 | 2885274211 | 744 |
| 95 | iso_pu_bacteria | 2902682994 | 2902689896 | 744 |
| 96 | 3300005577 | Ga0068857_100001382 | Ga0068857_10000138211 | 745 |
| 97 | 3300005983 | Ga0081540_1001169 | Ga0081540_100116919 | 745 |
| 98 | 3300009147 | Ga0114129_10109616 | Ga0114129_101096162 | 745 |
| 99 | 3300025915 | Ga0207693_10008754 | Ga0207693_100087543 | 745 |
| 100 | 3300026088 | Ga0207641_10016117 | Ga0207641_100161174 | 745 |
| 101 | 3300026116 | Ga0207674_10009444 | Ga0207674_100094447 | 745 |
| 102 | iso_pu_bacteria | 2881412998 | 2881414533 | 745 |
| 103 | iso_pu_bacteria | 2894414249 | 2894414645 | 745 |
| 104 | iso_pu_bacteria | 2510065045 | 2510251211 | 746 |
| 105 | iso_pu_bacteria | 2718217991 | 2719640329 | 746 |
| 106 | iso_pu_bacteria | 2842324504 | 2842327272 | 746 |
| 107 | iso_pu_bacteria | 2842348783 | 2842352121 | 746 |
| 108 | iso_pu_bacteria | 2842454564 | 2842458361 | 746 |
| 109 | iso_pu_bacteria | 2883087390 | 2883090085 | 746 |
| 110 | iso_pu_bacteria | 2912963787 | 2912965910 | 746 |
| 111 | iso_pu_bacteria | 2939651529 | 2939653618 | 746 |
| 112 | iso_pu_bacteria | 8055878733 | 8055883675 | 746 |
| 113 | 3300003187 | JGI25151J46595_10002389 | JGI25151J46595_100023892 | 749 |
| 114 | 3300003187 | JGI25151J46595_10003778 | JGI25151J46595_100037783 | 749 |
| 115 | 3300003771 | Ga0055526_1000233 | Ga0055526_10002331 | 749 |
| 116 | 3300003771 | Ga0055526_1008731 | Ga0055526_10087312 | 749 |
| 117 | 3300003771 | Ga0055526_1011844 | Ga0055526_10118444 | 749 |
| 118 | 3300003773 | Ga0055537_1004273 | Ga0055537_10042733 | 749 |
| 119 | 3300003781 | Ga0055536_1000219 | Ga0055536_100021917 | 749 |
| 120 | 3300003784 | Ga0055534_1001153 | Ga0055534_10011532 | 749 |
| 121 | 3300003784 | Ga0055534_1002094 | Ga0055534_10020944 | 749 |
| 122 | 3300025263 | Ga0209565_1000021 | Ga0209565_100002115 | 749 |
| 123 | 3300025291 | Ga0209675_1000040 | Ga0209675_1000040103 | 749 |
| 124 | 3300025291 | Ga0209675_1000908 | Ga0209675_10009088 | 749 |
| 125 | 3300025292 | Ga0209676_1000014 | Ga0209676_1000014551 | 749 |
| 126 | 3300025294 | Ga0209025_1000092 | Ga0209025_1000092103 | 749 |
| 127 | 3300025294 | Ga0209025_1016722 | Ga0209025_10167223 | 749 |
| 128 | 3300025295 | Ga0209564_1000159 | Ga0209564_100015943 | 749 |
| 129 | 3300025295 | Ga0209564_1000615 | Ga0209564_10006156 | 749 |
| 130 | 3300025295 | Ga0209564_1001196 | Ga0209564_100119623 | 749 |
| 131 | 3300025299 | Ga0209256_1000816 | Ga0209256_100081610 | 749 |
| 132 | 3300028800 | Ga0265338_10000444 | Ga0265338_1000044412 | 749 |
| 133 | 3300048924 | Ga0496121_0000598 | Ga0496121_0000598_62500_64758 | 749 |
| 134 | 3300048929 | Ga0496126_0000596 | Ga0496126_0000596_62339_64597 | 749 |
| 135 | 3300002737 | JGI25162J39368_1000028 | JGI25162J39368_1000028167 | 750 |
| 136 | 3300002741 | JGI25157J39369_1000537 | JGI25157J39369_10005378 | 750 |
| 137 | 3300002771 | JGI25163J39215_1000446 | JGI25163J39215_100044611 | 750 |
| 138 | 3300002772 | JGI25164J39214_1000012 | JGI25164J39214_1000012183 | 750 |
| 139 | 3300003214 | JGI25165J46597_1000048 | JGI25165J46597_100004866 | 750 |
| 140 | 3300003751 | Ga0055538_1000768 | Ga0055538_10007684 | 750 |
| 141 | 3300003761 | Ga0055535_1000027 | Ga0055535_100002754 | 750 |
| 142 | 3300003762 | Ga0055542_1000034 | Ga0055542_1000034166 | 750 |
| 143 | 3300003763 | Ga0055529_1000056 | Ga0055529_1000056131 | 750 |
| 144 | 3300009093 | Ga0105240_10000034 | Ga0105240_1000003429 | 750 |
| 145 | 3300025207 | Ga0209760_100424 | Ga0209760_1004247 | 750 |
| 146 | 3300025224 | Ga0209784_100016 | Ga0209784_10001668 | 750 |
| 147 | 3300025231 | Ga0207427_100019 | Ga0207427_100019345 | 750 |
| 148 | 3300025233 | Ga0209437_100054 | Ga0209437_100054166 | 750 |
| 149 | 3300025242 | Ga0209258_100039 | Ga0209258_10003968 | 750 |
| 150 | 3300025246 | Ga0209646_1000269 | Ga0209646_100026935 | 750 |
| 151 | 3300025250 | Ga0209026_1000012 | Ga0209026_1000012417 | 750 |
| 152 | 3300025254 | Ga0209148_1000001 | Ga0209148_10000011338 | 750 |
| 153 | 3300025256 | Ga0209759_1001389 | Ga0209759_10013896 | 750 |
| 154 | 3300025261 | Ga0209233_1000002 | Ga0209233_1000002892 | 750 |
| 155 | 3300025272 | Ga0209455_1000039 | Ga0209455_100003968 | 750 |
| 156 | 3300042013 | Ga0439456_000029 | Ga0439456_000029_210_2480 | 750 |
| 157 | 3300046454 | Ga0495592_0002129 | Ga0495592_0002129_3569_5839 | 750 |
| 158 | 3300047443 | Ga0495687_003859 | Ga0495687_003859_3162_5417 | 750 |
| 159 | 3300048905 | Ga0496102_0014683 | Ga0496102_0014683_755_3025 | 750 |
| 160 | 3300048920 | Ga0496117_0003425 | Ga0496117_0003425_5187_7457 | 750 |
| 161 | 3300048921 | Ga0496118_0004471 | Ga0496118_0004471_1013_3283 | 750 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1u2j-assembly3.cif.gz_C | crystal structure of the c-terminal domain from the catalase-peroxidase katg of escherichia coli (p21 21 21) | 0.9146 | 445 | 747 |
| 1u2j-assembly3.cif.gz_C | crystal structure of the c-terminal domain from the catalase-peroxidase katg of escherichia coli (p21 21 21) | 0.9117 | 445 | 747 |
| 7a7c-assembly1.cif.gz_A | cryo-em structure of w107r after heme uptake (1heme molecule) katg from m. tuberculosis | 0.8957 | 22 | 746 |
| 7aa3-assembly1.cif.gz_B | t275p after heme uptake from m. tuberculosis | 0.8954 | 27 | 746 |
| 5kqk-assembly1.cif.gz_A | crystal structure of the q233e/n240d variant of the catalase-peroxidase from b. pseudomallei | 0.895 | 16 | 747 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3wnuA04 | Mainly Alpha;Orthogonal Bundle;Peroxidase; domain 2;Peroxidase, domain 2 | 0.9706 | 602 | 722 | 1.10.420.10 |
| 3wnuA04 | Mainly Alpha;Orthogonal Bundle;Peroxidase; domain 2;Peroxidase, domain 2 | 0.9551 | 602 | 722 | 1.10.420.10 |
| 5jhzA04 | Mainly Alpha;Orthogonal Bundle;Peroxidase; domain 2;Peroxidase, domain 2 | 0.9432 | 602 | 721 | 1.10.420.10 |
| 3uw8A02 | Mainly Alpha;Orthogonal Bundle;Peroxidase; domain 2;Peroxidase, domain 2 | 0.9167 | 255 | 419 | 1.10.420.10 |
| 5jhzA04 | Mainly Alpha;Orthogonal Bundle;Peroxidase; domain 2;Peroxidase, domain 2 | 0.9066 | 602 | 721 | 1.10.420.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3B8IVK0-F1-model_v4 | Catalase-peroxidase | 0.9845 | 651 | 747 |
GO:0004096
GO:0005829 GO:0020037 GO:0042744 GO:0070301 |
| AF-A0A258UIU2-F1-model_v4 | Uncharacterized protein | 0.9841 | 653 | 746 |
GO:0004096
GO:0005829 GO:0020037 GO:0042744 GO:0070301 |
| AF-A0A7Z7LAQ8-F1-model_v4 | deleted | 0.9837 | 619 | 736 |
|
| AF-A0A3D4M2M5-F1-model_v4 | deleted | 0.9832 | 664 | 746 |
|
| AF-A0A2G6DP50-F1-model_v4 | Catalase-peroxidase | 0.9828 | 652 | 747 |
GO:0004096
GO:0005829 GO:0020037 GO:0042744 GO:0070301 |
Predicted Structure (AlphaFold2)
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