F236221
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 161 | 124 | 161 | 442 |
Family's Representative Sequence
| Representative Sequence | 3300005339|Ga0070660_100175830|Ga0070660_1001758301 |
| Length | 472 |
| Sequence | VLVLTFRLYAVEIKLLCSIFSRNASAVSLNEFAIRSKRTVTPDGLRNTVVVVRDGVIVDVSDPSRETSGIETIDVGNKVLMPGVIDPHVHINEPGRTDWEGFDTATKAAIAGGVTTLVDMPLNSSPVTTTALAFDDKLKATIGKLHTNCGFWGGVVPGNTSEIEKLIDKGVLGFKAFLTHSGIDEFPNTTEDDLRKTMPIIARHNLPLLVHCELTDNHQAVGNNRSYWPYLESRPRRWEDNAIGMMIRLCEEFNCRVHVVHLSSSDSIEQVARAKQKGLPLTVETGQHYLYFNAEQISDGQTQFKCAPPIREKENNERLWQALKDGIIDFVATDHSPATPDLKEIESGDFTKAWGGIASLQFALPVLWSAARQRDCGLNDVAKWLCENPAKLIGKQNSKGKIAKGFDADLIVWDGEKEFTVEEPMISHKHKVTPYLNETLSGVVEQTYLSGDKVFESGKFVQLNKGKIIRRD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 2 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 5 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 6 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 7 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 8 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 10 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 11 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 15 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 19 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 24 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 25 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 26 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 27 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 28 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 29 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 30 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 31 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 32 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 33 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 34 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 36 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 56 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 58 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 93 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 94 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 95 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 96 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 97 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 98 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 99 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 100 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 101 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 102 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 103 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 104 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 105 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 106 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 110 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 118 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 123 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 124 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.8 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 78.88 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.32 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH1_10008523 | 3300003316 | Bacteria | 3807 |
| 2 | rootH1_10123162 | 3300003316 | Bacteria | 4474 |
| 3 | rootH2_10049053 | 3300003320 | Bacteria | 20003 |
| 4 | rootL2_10020271 | 3300003322 | Bacteria | 29229 |
| 5 | rootL2_10031421 | 3300003322 | Bacteria | 4859 |
| 6 | rootL2_10031422 | 3300003322 | Bacteria | 5189 |
| 7 | rootL2_10193717 | 3300003322 | Bacteria | 4669 |
| 8 | rootL2_10211419 | 3300003322 | Bacteria | 3190 |
| 9 | rootH1_10227494 | 3300003323 | Unclassified | 3076 |
| 10 | JGI25160J50197_1004298 | 3300003354 | Bacteria | 6176 |
| 11 | Ga0055528_1000995 | 3300003790 | Bacteria | 18812 |
| 12 | Ga0055530_10004890 | 3300003791 | Bacteria | 6662 |
| 13 | Ga0055531_10000102 | 3300003794 | Bacteria | 92703 |
| 14 | Ga0065165_1000053 | 3300005262 | Bacteria | 189081 |
| 15 | Ga0065712_10002016 | 3300005290 | Bacteria | 4959 |
| 16 | Ga0065715_10100168 | 3300005293 | Bacteria | 3322 |
| 17 | Ga0070683_100013411 | 3300005329 | Bacteria | 7147 |
| 18 | Ga0070683_100211303 | 3300005329 | Bacteria | 1843 |
| 19 | Ga0070670_100048161 | 3300005331 | Bacteria | 3668 |
| 20 | Ga0070670_100177804 | 3300005331 | Bacteria | 1847 |
| 21 | Ga0068869_100011818 | 3300005334 | Bacteria | 5742 |
| 22 | Ga0070666_10000143 | 3300005335 | Bacteria | 48999 |
| 23 | Ga0070660_100175830 | 3300005339 | Bacteria | 1731 |
| 24 | Ga0070668_100040159 | 3300005347 | Bacteria | 3580 |
| 25 | Ga0070688_100031109 | 3300005365 | Bacteria | 3208 |
| 26 | Ga0070688_100077199 | 3300005365 | Bacteria | 2145 |
| 27 | Ga0070659_100000092 | 3300005366 | Bacteria | 67270 |
| 28 | Ga0070659_100023528 | 3300005366 | Bacteria | 4715 |
| 29 | Ga0070667_100175089 | 3300005367 | Bacteria | 1896 |
| 30 | Ga0070684_100290892 | 3300005535 | Bacteria | 1498 |
| 31 | Ga0070672_100229503 | 3300005543 | Bacteria | 1559 |
| 32 | Ga0068855_100041804 | 3300005563 | Bacteria | 5432 |
| 33 | Ga0068855_100215212 | 3300005563 | Bacteria | 2157 |
| 34 | Ga0068857_100038552 | 3300005577 | Bacteria | 4232 |
| 35 | Ga0068852_100004042 | 3300005616 | Bacteria | 10314 |
| 36 | Ga0068859_100000099 | 3300005617 | Bacteria | 80240 |
| 37 | Ga0068866_10006344 | 3300005718 | Bacteria | 4921 |
| 38 | Ga0068863_100001311 | 3300005841 | Bacteria | 24817 |
| 39 | Ga0068863_100008066 | 3300005841 | Bacteria | 10282 |
| 40 | Ga0068858_100026108 | 3300005842 | Bacteria | 5431 |
| 41 | Ga0068860_100001298 | 3300005843 | Bacteria | 27144 |
| 42 | Ga0068860_100001849 | 3300005843 | Bacteria | 22535 |
| 43 | Ga0068860_100027277 | 3300005843 | Bacteria | 5503 |
| 44 | Ga0068860_100231640 | 3300005843 | Bacteria | 1795 |
| 45 | Ga0068862_100034537 | 3300005844 | Bacteria | 4279 |
| 46 | Ga0081539_10026842 | 3300005985 | Bacteria | 3661 |
| 47 | Ga0075366_10004863 | 3300006195 | Bacteria | 7249 |
| 48 | Ga0075366_10077510 | 3300006195 | Bacteria | 1984 |
| 49 | Ga0097621_100003043 | 3300006237 | Bacteria | 11509 |
| 50 | Ga0097621_100103803 | 3300006237 | Bacteria | 2395 |
| 51 | Ga0068871_100047912 | 3300006358 | Bacteria | 3448 |
| 52 | Ga0097620_100000099 | 3300006931 | Bacteria | 80240 |
| 53 | Ga0111539_10005613 | 3300009094 | Bacteria | 16226 |
| 54 | Ga0105247_10022893 | 3300009101 | Unclassified | 3763 |
| 55 | Ga0105241_10005420 | 3300009174 | Bacteria | 9431 |
| 56 | Ga0105241_10025021 | 3300009174 | Bacteria | 4436 |
| 57 | Ga0105242_10169425 | 3300009176 | Unclassified | 1918 |
| 58 | Ga0105237_10001023 | 3300009545 | Bacteria | 37620 |
| 59 | Ga0105249_10007133 | 3300009553 | Bacteria | 9755 |
| 60 | Ga0105249_10146447 | 3300009553 | Bacteria | 2270 |
| 61 | Ga0105239_10000140 | 3300010375 | Bacteria | 101896 |
| 62 | Ga0105246_10019874 | 3300011119 | Unclassified | 4302 |
| 63 | Ga0157373_10000087 | 3300013100 | Bacteria | 80308 |
| 64 | Ga0157371_10020932 | 3300013102 | Bacteria | 4809 |
| 65 | Ga0157370_10001782 | 3300013104 | Bacteria | 26543 |
| 66 | Ga0157370_10234653 | 3300013104 | Bacteria | 1697 |
| 67 | Ga0157374_10147090 | 3300013296 | Unclassified | 2289 |
| 68 | Ga0157378_10078267 | 3300013297 | Bacteria | 2982 |
| 69 | Ga0157378_10301325 | 3300013297 | Bacteria | 1551 |
| 70 | Ga0163162_10001451 | 3300013306 | Bacteria | 22074 |
| 71 | Ga0157375_10065878 | 3300013308 | Bacteria | 3613 |
| 72 | Ga0157380_10002002 | 3300014326 | Bacteria | 13580 |
| 73 | Ga0157380_10087725 | 3300014326 | Bacteria | 2558 |
| 74 | Ga0157380_10218827 | 3300014326 | Bacteria | 1702 |
| 75 | Ga0157377_10007840 | 3300014745 | Bacteria | 5177 |
| 76 | Ga0157376_10056286 | 3300014969 | Bacteria | 3285 |
| 77 | Ga0209026_1000505 | 3300025250 | Bacteria | 27798 |
| 78 | Ga0209673_1000034 | 3300025273 | Bacteria | 328788 |
| 79 | Ga0209564_1002598 | 3300025295 | Bacteria | 13858 |
| 80 | Ga0209564_1002679 | 3300025295 | Bacteria | 13506 |
| 81 | Ga0209758_1003706 | 3300025297 | Bacteria | 13553 |
| 82 | Ga0209758_1023881 | 3300025297 | Unclassified | 2747 |
| 83 | Ga0209050_1000673 | 3300025298 | Bacteria | 51628 |
| 84 | Ga0207426_1000821 | 3300025302 | Bacteria | 33275 |
| 85 | Ga0209257_1000004 | 3300025304 | Bacteria | 1678347 |
| 86 | Ga0209257_1003313 | 3300025304 | Bacteria | 13977 |
| 87 | Ga0207697_10022801 | 3300025315 | Bacteria | 2564 |
| 88 | Ga0207710_10011329 | 3300025900 | Bacteria | 3755 |
| 89 | Ga0207680_10000096 | 3300025903 | Bacteria | 40670 |
| 90 | Ga0207645_10040005 | 3300025907 | Bacteria | 3003 |
| 91 | Ga0207654_10000240 | 3300025911 | Bacteria | 33102 |
| 92 | Ga0207695_10142025 | 3300025913 | Bacteria | 2348 |
| 93 | Ga0207671_10001586 | 3300025914 | Bacteria | 25838 |
| 94 | Ga0207681_10015721 | 3300025923 | Bacteria | 4724 |
| 95 | Ga0207650_10125932 | 3300025925 | Bacteria | 2000 |
| 96 | Ga0207659_10074492 | 3300025926 | Bacteria | 2488 |
| 97 | Ga0207690_10000309 | 3300025932 | Bacteria | 33416 |
| 98 | Ga0207690_10119355 | 3300025932 | Bacteria | 1913 |
| 99 | Ga0207706_10031029 | 3300025933 | Bacteria | 4763 |
| 100 | Ga0207670_10061411 | 3300025936 | Bacteria | 2564 |
| 101 | Ga0207689_10001706 | 3300025942 | Bacteria | 20803 |
| 102 | Ga0207661_10008835 | 3300025944 | Bacteria | 7210 |
| 103 | Ga0207661_10180355 | 3300025944 | Bacteria | 1844 |
| 104 | Ga0207679_10013138 | 3300025945 | Bacteria | 5424 |
| 105 | Ga0207667_10046085 | 3300025949 | Bacteria | 4616 |
| 106 | Ga0207667_10181757 | 3300025949 | Bacteria | 2159 |
| 107 | Ga0207712_10001719 | 3300025961 | Bacteria | 14686 |
| 108 | Ga0207668_10012967 | 3300025972 | Bacteria | 5122 |
| 109 | Ga0207668_10049180 | 3300025972 | Bacteria | 2897 |
| 110 | Ga0207658_10094007 | 3300025986 | Unclassified | 2332 |
| 111 | Ga0207658_10245969 | 3300025986 | Bacteria | 1518 |
| 112 | Ga0207677_10042619 | 3300026023 | Bacteria | 3011 |
| 113 | Ga0207708_10058399 | 3300026075 | Bacteria | 2943 |
| 114 | Ga0207702_10106985 | 3300026078 | Bacteria | 2479 |
| 115 | Ga0207641_10000998 | 3300026088 | Bacteria | 28957 |
| 116 | Ga0207641_10013301 | 3300026088 | Bacteria | 6751 |
| 117 | Ga0207648_10000937 | 3300026089 | Bacteria | 32934 |
| 118 | Ga0207674_10004099 | 3300026116 | Bacteria | 17649 |
| 119 | Ga0207674_10013652 | 3300026116 | Bacteria | 8996 |
| 120 | Ga0207675_100000507 | 3300026118 | Bacteria | 37845 |
| 121 | Ga0207698_10006965 | 3300026142 | Bacteria | 7073 |
| 122 | Ga0268265_10062058 | 3300028380 | Bacteria | 2870 |
| 123 | Ga0268264_10001066 | 3300028381 | Bacteria | 27233 |
| 124 | Ga0268264_10007607 | 3300028381 | Bacteria | 9032 |
| 125 | Ga0268264_10057434 | 3300028381 | Bacteria | 3255 |
| 126 | Ga0268264_10147071 | 3300028381 | Bacteria | 2108 |
| 127 | Ga0307515_10000024 | 3300028794 | Bacteria | 393119 |
| 128 | Ga0307511_10000651 | 3300030521 | Bacteria | 37072 |
| 129 | Ga0265327_10007307 | 3300031251 | Bacteria | 8564 |
| 130 | Ga0307509_10080204 | 3300031507 | Unclassified | 3376 |
| 131 | Ga0307408_100001197 | 3300031548 | Bacteria | 19594 |
| 132 | Ga0307408_100002615 | 3300031548 | Bacteria | 12534 |
| 133 | Ga0307518_10123116 | 3300031838 | Bacteria | 1832 |
| 134 | Ga0307409_100199994 | 3300031995 | Bacteria | 1787 |
| 135 | Ga0307414_10092038 | 3300032004 | Bacteria | 2256 |
| 136 | Ga0439445_0007039 | 3300042004 | Bacteria | 2600 |
| 137 | Ga0439449_0009902 | 3300042007 | Bacteria | 3605 |
| 138 | Ga0439449_0011163 | 3300042007 | Unclassified | 3383 |
| 139 | Ga0466969_0001622 | 3300044656 | Bacteria | 12048 |
| 140 | Ga0466968_0006985 | 3300044735 | Unclassified | 4278 |
| 141 | Ga0466957_0000530 | 3300044842 | Bacteria | 19237 |
| 142 | Ga0466959_0000002 | 3300045049 | Bacteria | 362671 |
| 143 | Ga0495633_0000017 | 3300046558 | Bacteria | 249973 |
| 144 | Ga0495672_0011343 | 3300047320 | Bacteria | 6295 |
| 145 | Ga0495686_0011419 | 3300047472 | Bacteria | 6258 |
| 146 | Ga0496126_0032961 | 3300048929 | Bacteria | 4876 |
| 147 | Ga0501032_0005292 | 3300049569 | Bacteria | 9596 |
| 148 | Ga0501033_0000610 | 3300049570 | Bacteria | 33102 |
| 149 | Ga0501034_0000172 | 3300049571 | Bacteria | 120544 |
| 150 | Ga0501037_0008961 | 3300049573 | Bacteria | 7330 |
| 151 | Ga0501039_0000906 | 3300049575 | Bacteria | 21601 |
| 152 | Ga0501043_0004436 | 3300049579 | Bacteria | 11402 |
| 153 | Ga0501047_0071556 | 3300049581 | Bacteria | 3338 |
| 154 | Ga0501241_000791 | 3300049758 | Bacteria | 6704 |
| 155 | Ga0501035_0002297 | 3300049822 | Bacteria | 18882 |
| 156 | Ga0501044_0001010 | 3300049823 | Bacteria | 33787 |
| 157 | Ga0501045_0001691 | 3300049824 | Bacteria | 14854 |
| 158 | nmdc:mga08y16_11997_c1 | 3300050511 | Bacteria | 9100 |
| 159 | Ga0500568_0000088 | 3300053139 | Bacteria | 89215 |
| 160 | Ga0500622_0001731 | 3300053156 | Bacteria | 16871 |
| 161 | Ga0500611_000003 | 3300053727 | Bacteria | 333431 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005335 | Ga0070666_10000143 | Ga0070666_1000014327 | 406 |
| 2 | 3300005347 | Ga0070668_100040159 | Ga0070668_1000401591 | 406 |
| 3 | 3300005616 | Ga0068852_100004042 | Ga0068852_1000040428 | 406 |
| 4 | 3300005841 | Ga0068863_100001311 | Ga0068863_10000131115 | 406 |
| 5 | 3300006237 | Ga0097621_100103803 | Ga0097621_1001038032 | 406 |
| 6 | 3300009101 | Ga0105247_10022893 | Ga0105247_100228932 | 406 |
| 7 | 3300009174 | Ga0105241_10005420 | Ga0105241_100054204 | 406 |
| 8 | 3300009545 | Ga0105237_10001023 | Ga0105237_1000102311 | 406 |
| 9 | 3300009553 | Ga0105249_10146447 | Ga0105249_101464472 | 406 |
| 10 | 3300011119 | Ga0105246_10019874 | Ga0105246_100198743 | 406 |
| 11 | 3300013296 | Ga0157374_10147090 | Ga0157374_101470901 | 406 |
| 12 | 3300013306 | Ga0163162_10001451 | Ga0163162_1000145113 | 406 |
| 13 | 3300025900 | Ga0207710_10011329 | Ga0207710_100113292 | 406 |
| 14 | 3300025903 | Ga0207680_10000096 | Ga0207680_1000009617 | 406 |
| 15 | 3300025972 | Ga0207668_10012967 | Ga0207668_100129673 | 406 |
| 16 | 3300025986 | Ga0207658_10094007 | Ga0207658_100940072 | 406 |
| 17 | 3300026023 | Ga0207677_10042619 | Ga0207677_100426192 | 406 |
| 18 | 3300026088 | Ga0207641_10000998 | Ga0207641_1000099827 | 406 |
| 19 | 3300026142 | Ga0207698_10006965 | Ga0207698_100069657 | 406 |
| 20 | 3300006195 | Ga0075366_10077510 | Ga0075366_100775102 | 424 |
| 21 | 3300047472 | Ga0495686_0011419 | Ga0495686_0011419_1167_2498 | 424 |
| 22 | 3300006195 | Ga0075366_10004863 | Ga0075366_100048632 | 425 |
| 23 | 3300013297 | Ga0157378_10078267 | Ga0157378_100782673 | 426 |
| 24 | 3300006237 | Ga0097621_100003043 | Ga0097621_1000030439 | 427 |
| 25 | 3300006358 | Ga0068871_100047912 | Ga0068871_1000479122 | 427 |
| 26 | 3300014969 | Ga0157376_10056286 | Ga0157376_100562862 | 427 |
| 27 | 3300005563 | Ga0068855_100041804 | Ga0068855_1000418047 | 428 |
| 28 | 3300005577 | Ga0068857_100038552 | Ga0068857_1000385523 | 428 |
| 29 | 3300009174 | Ga0105241_10025021 | Ga0105241_100250212 | 428 |
| 30 | 3300025949 | Ga0207667_10046085 | Ga0207667_100460852 | 428 |
| 31 | 3300026078 | Ga0207702_10106985 | Ga0207702_101069852 | 428 |
| 32 | 3300026116 | Ga0207674_10013652 | Ga0207674_1001365211 | 428 |
| 33 | 3300003322 | rootL2_10031421 | rootL2_100314213 | 431 |
| 34 | 3300003322 | rootL2_10031422 | rootL2_100314223 | 431 |
| 35 | 3300005366 | Ga0070659_100023528 | Ga0070659_1000235284 | 433 |
| 36 | 3300025932 | Ga0207690_10119355 | Ga0207690_101193552 | 433 |
| 37 | 3300005841 | Ga0068863_100008066 | Ga0068863_1000080666 | 435 |
| 38 | 3300026088 | Ga0207641_10013301 | Ga0207641_100133018 | 435 |
| 39 | 3300005331 | Ga0070670_100048161 | Ga0070670_1000481613 | 436 |
| 40 | 3300014326 | Ga0157380_10218827 | Ga0157380_102188272 | 437 |
| 41 | 3300042004 | Ga0439445_0007039 | Ga0439445_0007039_535_1893 | 439 |
| 42 | 3300042007 | Ga0439449_0009902 | Ga0439449_0009902_91_1449 | 439 |
| 43 | 3300013104 | Ga0157370_10001782 | Ga0157370_1000178215 | 441 |
| 44 | 3300005985 | Ga0081539_10026842 | Ga0081539_100268422 | 442 |
| 45 | 3300003316 | rootH1_10123162 | rootH1_101231622 | 443 |
| 46 | 3300003322 | rootL2_10193717 | rootL2_101937172 | 443 |
| 47 | 3300005329 | Ga0070683_100013411 | Ga0070683_1000134114 | 443 |
| 48 | 3300005535 | Ga0070684_100290892 | Ga0070684_1002908921 | 443 |
| 49 | 3300025944 | Ga0207661_10008835 | Ga0207661_100088355 | 443 |
| 50 | 3300025945 | Ga0207679_10013138 | Ga0207679_100131384 | 443 |
| 51 | 3300031507 | Ga0307509_10080204 | Ga0307509_100802043 | 443 |
| 52 | 3300031838 | Ga0307518_10123116 | Ga0307518_101231162 | 443 |
| 53 | 3300053727 | Ga0500611_000003 | Ga0500611_000003_32087_33499 | 443 |
| 54 | 3300005290 | Ga0065712_10002016 | Ga0065712_100020163 | 444 |
| 55 | 3300005293 | Ga0065715_10100168 | Ga0065715_101001682 | 444 |
| 56 | 3300005334 | Ga0068869_100011818 | Ga0068869_1000118181 | 444 |
| 57 | 3300005339 | Ga0070660_100175830 | Ga0070660_1001758301 | 444 |
| 58 | 3300005365 | Ga0070688_100031109 | Ga0070688_1000311092 | 444 |
| 59 | 3300005365 | Ga0070688_100077199 | Ga0070688_1000771992 | 444 |
| 60 | 3300005366 | Ga0070659_100000092 | Ga0070659_10000009220 | 444 |
| 61 | 3300005367 | Ga0070667_100175089 | Ga0070667_1001750892 | 444 |
| 62 | 3300005543 | Ga0070672_100229503 | Ga0070672_1002295031 | 444 |
| 63 | 3300005617 | Ga0068859_100000099 | Ga0068859_10000009956 | 444 |
| 64 | 3300005718 | Ga0068866_10006344 | Ga0068866_100063445 | 444 |
| 65 | 3300005842 | Ga0068858_100026108 | Ga0068858_1000261086 | 444 |
| 66 | 3300005843 | Ga0068860_100001298 | Ga0068860_1000012984 | 444 |
| 67 | 3300005843 | Ga0068860_100001849 | Ga0068860_10000184910 | 444 |
| 68 | 3300005843 | Ga0068860_100027277 | Ga0068860_1000272773 | 444 |
| 69 | 3300005844 | Ga0068862_100034537 | Ga0068862_1000345372 | 444 |
| 70 | 3300006931 | Ga0097620_100000099 | Ga0097620_10000009956 | 444 |
| 71 | 3300009094 | Ga0111539_10005613 | Ga0111539_1000561311 | 444 |
| 72 | 3300009176 | Ga0105242_10169425 | Ga0105242_101694252 | 444 |
| 73 | 3300009553 | Ga0105249_10007133 | Ga0105249_100071337 | 444 |
| 74 | 3300013297 | Ga0157378_10301325 | Ga0157378_103013251 | 444 |
| 75 | 3300013308 | Ga0157375_10065878 | Ga0157375_100658783 | 444 |
| 76 | 3300014326 | Ga0157380_10002002 | Ga0157380_100020026 | 444 |
| 77 | 3300014745 | Ga0157377_10007840 | Ga0157377_100078404 | 444 |
| 78 | 3300025315 | Ga0207697_10022801 | Ga0207697_100228012 | 444 |
| 79 | 3300025907 | Ga0207645_10040005 | Ga0207645_100400053 | 444 |
| 80 | 3300025911 | Ga0207654_10000240 | Ga0207654_100002403 | 444 |
| 81 | 3300025914 | Ga0207671_10001586 | Ga0207671_1000158611 | 444 |
| 82 | 3300025923 | Ga0207681_10015721 | Ga0207681_100157214 | 444 |
| 83 | 3300025932 | Ga0207690_10000309 | Ga0207690_1000030923 | 444 |
| 84 | 3300025933 | Ga0207706_10031029 | Ga0207706_100310293 | 444 |
| 85 | 3300025936 | Ga0207670_10061411 | Ga0207670_100614112 | 444 |
| 86 | 3300025942 | Ga0207689_10001706 | Ga0207689_1000170623 | 444 |
| 87 | 3300025961 | Ga0207712_10001719 | Ga0207712_100017192 | 444 |
| 88 | 3300025972 | Ga0207668_10049180 | Ga0207668_100491802 | 444 |
| 89 | 3300025986 | Ga0207658_10245969 | Ga0207658_102459692 | 444 |
| 90 | 3300026075 | Ga0207708_10058399 | Ga0207708_100583992 | 444 |
| 91 | 3300026089 | Ga0207648_10000937 | Ga0207648_100009375 | 444 |
| 92 | 3300026116 | Ga0207674_10004099 | Ga0207674_1000409910 | 444 |
| 93 | 3300026118 | Ga0207675_100000507 | Ga0207675_10000050731 | 444 |
| 94 | 3300028380 | Ga0268265_10062058 | Ga0268265_100620582 | 444 |
| 95 | 3300028381 | Ga0268264_10001066 | Ga0268264_100010664 | 444 |
| 96 | 3300028381 | Ga0268264_10007607 | Ga0268264_100076078 | 444 |
| 97 | 3300028381 | Ga0268264_10147071 | Ga0268264_101470711 | 444 |
| 98 | 3300028794 | Ga0307515_10000024 | Ga0307515_10000024234 | 444 |
| 99 | 3300050511 | nmdc:mga08y16_11997_c1 | nmdc:mga08y16_11997_c1_5266_6630 | 444 |
| 100 | 3300053156 | Ga0500622_0001731 | Ga0500622_0001731_13338_14672 | 444 |
| 101 | 3300003320 | rootH2_10049053 | rootH2_1004905319 | 445 |
| 102 | 3300003322 | rootL2_10020271 | rootL2_100202715 | 445 |
| 103 | 3300003323 | rootH1_10227494 | rootH1_102274942 | 445 |
| 104 | 3300005329 | Ga0070683_100211303 | Ga0070683_1002113032 | 445 |
| 105 | 3300005843 | Ga0068860_100231640 | Ga0068860_1002316402 | 445 |
| 106 | 3300013100 | Ga0157373_10000087 | Ga0157373_1000008724 | 445 |
| 107 | 3300025250 | Ga0209026_1000505 | Ga0209026_100050512 | 445 |
| 108 | 3300025944 | Ga0207661_10180355 | Ga0207661_101803552 | 445 |
| 109 | 3300028381 | Ga0268264_10057434 | Ga0268264_100574342 | 445 |
| 110 | 3300042007 | Ga0439449_0011163 | Ga0439449_0011163_1742_3079 | 445 |
| 111 | 3300044656 | Ga0466969_0001622 | Ga0466969_0001622_553_1914 | 445 |
| 112 | 3300044735 | Ga0466968_0006985 | Ga0466968_0006985_387_1766 | 445 |
| 113 | 3300045049 | Ga0466959_0000002 | Ga0466959_0000002_182810_184171 | 445 |
| 114 | 3300005331 | Ga0070670_100177804 | Ga0070670_1001778042 | 446 |
| 115 | 3300005563 | Ga0068855_100215212 | Ga0068855_1002152122 | 446 |
| 116 | 3300010375 | Ga0105239_10000140 | Ga0105239_1000014058 | 446 |
| 117 | 3300013104 | Ga0157370_10234653 | Ga0157370_102346532 | 446 |
| 118 | 3300014326 | Ga0157380_10087725 | Ga0157380_100877252 | 446 |
| 119 | 3300025913 | Ga0207695_10142025 | Ga0207695_101420252 | 446 |
| 120 | 3300025925 | Ga0207650_10125932 | Ga0207650_101259322 | 446 |
| 121 | 3300025926 | Ga0207659_10074492 | Ga0207659_100744922 | 446 |
| 122 | 3300025949 | Ga0207667_10181757 | Ga0207667_101817572 | 446 |
| 123 | 3300031548 | Ga0307408_100001197 | Ga0307408_10000119710 | 446 |
| 124 | 3300031548 | Ga0307408_100002615 | Ga0307408_1000026159 | 446 |
| 125 | 3300031995 | Ga0307409_100199994 | Ga0307409_1001999942 | 446 |
| 126 | 3300032004 | Ga0307414_10092038 | Ga0307414_100920381 | 446 |
| 127 | 3300044842 | Ga0466957_0000530 | Ga0466957_0000530_12551_13906 | 446 |
| 128 | 3300047320 | Ga0495672_0011343 | Ga0495672_0011343_1315_2664 | 446 |
| 129 | 3300049569 | Ga0501032_0005292 | Ga0501032_0005292_2037_3386 | 446 |
| 130 | 3300049570 | Ga0501033_0000610 | Ga0501033_0000610_21765_23114 | 446 |
| 131 | 3300049571 | Ga0501034_0000172 | Ga0501034_0000172_69125_70474 | 446 |
| 132 | 3300049573 | Ga0501037_0008961 | Ga0501037_0008961_450_1799 | 446 |
| 133 | 3300049575 | Ga0501039_0000906 | Ga0501039_0000906_12751_14100 | 446 |
| 134 | 3300049579 | Ga0501043_0004436 | Ga0501043_0004436_8808_10157 | 446 |
| 135 | 3300049581 | Ga0501047_0071556 | Ga0501047_0071556_1072_2421 | 446 |
| 136 | 3300049758 | Ga0501241_000791 | Ga0501241_000791_4872_6215 | 446 |
| 137 | 3300049822 | Ga0501035_0002297 | Ga0501035_0002297_9729_11078 | 446 |
| 138 | 3300049823 | Ga0501044_0001010 | Ga0501044_0001010_22811_24160 | 446 |
| 139 | 3300049824 | Ga0501045_0001691 | Ga0501045_0001691_3202_4551 | 446 |
| 140 | 3300003794 | Ga0055531_10000102 | Ga0055531_1000010212 | 447 |
| 141 | 3300025304 | Ga0209257_1000004 | Ga0209257_10000041337 | 447 |
| 142 | 3300031251 | Ga0265327_10007307 | Ga0265327_100073073 | 447 |
| 143 | 3300046558 | Ga0495633_0000017 | Ga0495633_0000017_6795_8138 | 447 |
| 144 | 3300048929 | Ga0496126_0032961 | Ga0496126_0032961_797_2143 | 447 |
| 145 | 3300053139 | Ga0500568_0000088 | Ga0500568_0000088_81272_82639 | 447 |
| 146 | 3300003316 | rootH1_10008523 | rootH1_100085232 | 448 |
| 147 | 3300003322 | rootL2_10211419 | rootL2_102114192 | 448 |
| 148 | 3300003354 | JGI25160J50197_1004298 | JGI25160J50197_10042983 | 448 |
| 149 | 3300003790 | Ga0055528_1000995 | Ga0055528_100099510 | 448 |
| 150 | 3300003791 | Ga0055530_10004890 | Ga0055530_100048903 | 448 |
| 151 | 3300005262 | Ga0065165_1000053 | Ga0065165_1000053153 | 448 |
| 152 | 3300013102 | Ga0157371_10020932 | Ga0157371_100209322 | 448 |
| 153 | 3300025273 | Ga0209673_1000034 | Ga0209673_100003444 | 448 |
| 154 | 3300025295 | Ga0209564_1002598 | Ga0209564_10025983 | 448 |
| 155 | 3300025295 | Ga0209564_1002679 | Ga0209564_10026793 | 448 |
| 156 | 3300025297 | Ga0209758_1003706 | Ga0209758_100370610 | 448 |
| 157 | 3300025297 | Ga0209758_1023881 | Ga0209758_10238813 | 448 |
| 158 | 3300025298 | Ga0209050_1000673 | Ga0209050_10006736 | 448 |
| 159 | 3300025302 | Ga0207426_1000821 | Ga0207426_100082127 | 448 |
| 160 | 3300025304 | Ga0209257_1003313 | Ga0209257_100331311 | 448 |
| 161 | 3300030521 | Ga0307511_10000651 | Ga0307511_1000065126 | 448 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3hm7-assembly1.cif.gz_B | crystal structure of allantoinase from bacillus halodurans c-125 | 0.9371 | 4 | 430 |
| 3e74-assembly1.cif.gz_D | crystal structure of e. coli allantoinase with iron ions at the metal center | 0.9349 | 2 | 444 |
| 3e74-assembly1.cif.gz_B | crystal structure of e. coli allantoinase with iron ions at the metal center | 0.9337 | 2 | 444 |
| 3e74-assembly1.cif.gz_C | crystal structure of e. coli allantoinase with iron ions at the metal center | 0.9324 | 2 | 444 |
| 8hfd-assembly1.cif.gz_A | crystal structure of allantoinase from e. coli bl21 | 0.9313 | 2 | 444 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q5A7L5_309_569_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9771 | 195 | 430 | 3.20.20.140 |
| af_F1RB68_4_438_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9701 | 1 | 430 | 3.20.20.140 |
| af_Q54SV3_1_453_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9604 | 2 | 431 | 3.20.20.140 |
| af_F1RB68_4_438_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.957 | 1 | 430 | 3.20.20.140 |
| af_P32375_65_377_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9522 | 55 | 365 | 3.20.20.140 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2S9GBA9-F1-model_v4 | Allantoinase | 0.9867 | 224 | 306 |
GO:0004038
GO:0005737 GO:0006145 |
| AF-B0D0J9-F1-model_v4 | allantoinase (EC 3.5.2.5) | 0.98 | 58 | 443 |
GO:0000256
GO:0004038 GO:0005737 GO:0006145 GO:0008270 GO:0050897 |
| AF-A0A553MN19-F1-model_v4 | allantoinase (EC 3.5.2.5) | 0.9771 | 53 | 444 |
GO:0000256
GO:0004038 GO:0005737 GO:0006145 GO:0008270 GO:0050897 |
| AF-A0A6I5CQV1-F1-model_v4 | allantoinase (EC 3.5.2.5) | 0.9766 | 82 | 447 |
GO:0000256
GO:0004038 GO:0005737 GO:0006145 GO:0008270 GO:0050897 |
| AF-A0A444UDI8-F1-model_v4 | allantoinase (EC 3.5.2.5) | 0.9756 | 44 | 396 |
GO:0000256
GO:0004038 GO:0005737 GO:0006145 GO:0008270 GO:0050897 |
Predicted Structure (AlphaFold2)
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