F236167

General Info

Members Datasets Scaffolds Average Seq Length
161 101 161 999

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100046476|Ga0070670_1000464761
Length 1088
Sequence MKSSIRINKKSTAVSSLQALRWTLLSTFLIAPSPSWNIQSVHGSAAQNTKFKVLAKPLTKDNFIGLKQADIRIDDYLFLLIVQSVEGMKGAISRPPINRVLVLSFVVILLCHTVHAQSTASIEGQVIDQNGAILPSVEITVVSNNIGIMRVGATDDDGRYQIAALPVGSYRIEVRAEGFQTQIIERLNLEVGRTVKLNFQLRVGEVSQAVTVSTANDLVEHSNVSIDHVVDQRMVQETPLNGRYFLDLALRVPGSVTPPQGAFSAAPMRGLGSLAINTGGNREEMVNYQVNGITLNNLTFGSISFQPSINTIQEFKVDNSTFSAEYGQSGGAVVNLATRSGSNEFHGEVFEFLRNDALDARNFFESTSQHPAPFKRNQFGGNVGGPIISYEGLRQRQGLNLNSVVLSEAQRASVTDPVIAKLIEFIPRPNLVDSSGTPRFVGTDNAPVDVDQWTTDISYVLNEQDTLHGYYAVQRLDSREPIRTGNTIPGFGNNTNVLRQIFTLNETHIFGPNLVNEARMGFNRFSSTSDPNAQLNPADFGIRNGIDVPIGLPQINVAGGVLNLGGPAAQPSGRGDTTFVVADNASWLSGLHSLKFGGEYRQFLNNNFRQGTGSFNFPTVEAFLSGTANSFNLTLGSQSSSITQGALGFFVHDNYKARPNLTLDFGLRYEWNMTPSERYDRFIVFDPESASLIRIGSGIDAIYHENNKNFQPRVGFAWTPFGGGKTVLRAAYGIYVDQPMTSVVTPTSGNPPLAIPLTFAGSVRLDNAIDVAGPVSLAPQTVDHDFDNAYMQSWNLNVQHQFTPFVVMFGYIGSKGTHLITRRNLNQPVNGARPYPALSNSSPILPGAPLGNITQAESSGNSSYNALWVTARRRLTRNLQFDASYTWSKSLDYSSFSTRGIVIQNSYDLDADRGLSDFDARHRFVVTALYELPFHQNRLVDGWQLSAIVQSQSGNAFNVVTTNSTVNGIAGTLRPDVNGPINILGRVDGWFDTSVFTAVERLGNLGRNAVIGPTFNNTDFSITKTTKLAENLRIQLRAEFFDLFNHANFGQPNNVVGSPAFGLITNTRFPTGESGSSRQIQFAMRLMF

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
86 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
87 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
88 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
89 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
90 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
91 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
92 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
93 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
94 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
95 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
96 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
98 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.38
Stem 0
Stem Tuber 0
Unclassified 0.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000015 3300002459 Bacteria 112804
2 Ga0065712_10010232 3300005290 Unclassified 4034
3 Ga0070690_100001684 3300005330 Bacteria 11642
4 Ga0070670_100046476 3300005331 Bacteria 3733
5 Ga0070682_100000128 3300005337 Bacteria 65176
6 Ga0070682_100001391 3300005337 Bacteria 13638
7 Ga0070682_100001505 3300005337 Bacteria 13062
8 Ga0070682_100003409 3300005337 Bacteria 8816
9 Ga0070689_100000729 3300005340 Bacteria 20093
10 Ga0070661_100005186 3300005344 Bacteria 8968
11 Ga0070692_10008695 3300005345 Unclassified 4540
12 Ga0070669_100008282 3300005353 Bacteria 7423
13 Ga0070659_100002568 3300005366 Bacteria 12912
14 Ga0070703_10000458 3300005406 Bacteria 16320
15 Ga0070705_100008012 3300005440 Bacteria 5223
16 Ga0070700_100005641 3300005441 Bacteria 6639
17 Ga0070700_100007087 3300005441 Bacteria 6028
18 Ga0070694_100004202 3300005444 Bacteria 8653
19 Ga0070694_100014057 3300005444 Bacteria 5007
20 Ga0070694_100026421 3300005444 Bacteria 3762
21 Ga0070708_100013373 3300005445 Bacteria 6717
22 Ga0070662_100022435 3300005457 Unclassified 4322
23 Ga0070681_10001621 3300005458 Bacteria 20048
24 Ga0068867_100035424 3300005459 Bacteria 3620
25 Ga0070706_100000193 3300005467 Bacteria 76590
26 Ga0070699_100032718 3300005518 Bacteria 4491
27 Ga0070679_100006454 3300005530 Bacteria 10927
28 Ga0070697_100020293 3300005536 Bacteria 5256
29 Ga0070697_100051372 3300005536 Bacteria 3349
30 Ga0070695_100000455 3300005545 Bacteria 21307
31 Ga0070696_100001202 3300005546 Bacteria 16791
32 Ga0070704_100011780 3300005549 Bacteria 5377
33 Ga0070664_100000254 3300005564 Bacteria 38403
34 Ga0068852_100018169 3300005616 Bacteria 5536
35 Ga0068859_100014444 3300005617 Bacteria 7925
36 Ga0068859_100020485 3300005617 Bacteria 6637
37 Ga0068864_100061703 3300005618 Unclassified 3247
38 Ga0068861_100006226 3300005719 Bacteria 8117
39 Ga0068861_100014706 3300005719 Bacteria 5496
40 Ga0068861_100044980 3300005719 Unclassified 3322
41 Ga0068851_10000462 3300005834 Bacteria 17895
42 Ga0068860_100012751 3300005843 Bacteria 8264
43 Ga0068862_100007256 3300005844 Bacteria 9200
44 Ga0068862_100021510 3300005844 Bacteria 5390
45 Ga0081455_10023103 3300005937 Bacteria 5792
46 Ga0097621_100012367 3300006237 Bacteria 6324
47 Ga0068871_100003113 3300006358 Bacteria 11384
48 Ga0075428_100011300 3300006844 Bacteria 9933
49 Ga0075430_100010378 3300006846 Bacteria 7888
50 Ga0075431_100004774 3300006847 Bacteria 13321
51 Ga0075429_100006045 3300006880 Bacteria 10470
52 Ga0075436_100021775 3300006914 Unclassified 4399
53 Ga0097620_100014444 3300006931 Bacteria 7925
54 Ga0097620_100020483 3300006931 Bacteria 6637
55 Ga0111539_10004234 3300009094 Bacteria 18802
56 Ga0111539_10008603 3300009094 Bacteria 12962
57 Ga0111539_10011139 3300009094 Bacteria 11313
58 Ga0111539_10013474 3300009094 Bacteria 10218
59 Ga0111539_10021659 3300009094 Bacteria 7906
60 Ga0105247_10000291 3300009101 Bacteria 45576
61 Ga0114129_10011569 3300009147 Bacteria 12564
62 Ga0114129_10023635 3300009147 Bacteria 8711
63 Ga0114129_10027461 3300009147 Bacteria 8058
64 Ga0114129_10033316 3300009147 Bacteria 7280
65 Ga0114129_10033441 3300009147 Bacteria 7267
66 Ga0105243_10000027 3300009148 Bacteria 191224
67 Ga0105242_10000056 3300009176 Bacteria 76052
68 Ga0105242_10001172 3300009176 Bacteria 20620
69 Ga0105248_10002017 3300009177 Bacteria 22533
70 Ga0105248_10038204 3300009177 Bacteria 5372
71 Ga0105248_10055998 3300009177 Bacteria 4423
72 Ga0105237_10000837 3300009545 Bacteria 42069
73 Ga0105238_10001162 3300009551 Bacteria 26555
74 Ga0105238_10023363 3300009551 Bacteria 6302
75 Ga0105249_10001330 3300009553 Bacteria 21636
76 Ga0105249_10002944 3300009553 Bacteria 14690
77 Ga0105249_10037906 3300009553 Bacteria 4375
78 Ga0105249_10055678 3300009553 Bacteria 3619
79 Ga0157373_10008017 3300013100 Bacteria 7851
80 Ga0157374_10038222 3300013296 Bacteria 4411
81 Ga0157378_10001855 3300013297 Bacteria 18973
82 Ga0157378_10020128 3300013297 Bacteria 5868
83 Ga0157378_10024806 3300013297 Bacteria 5280
84 Ga0157378_10025176 3300013297 Bacteria 5243
85 Ga0163162_10001025 3300013306 Bacteria 25955
86 Ga0163162_10014542 3300013306 Bacteria 7690
87 Ga0163162_10046412 3300013306 Bacteria 4354
88 Ga0157372_10008512 3300013307 Bacteria 10892
89 Ga0163163_10000142 3300014325 Bacteria 74753
90 Ga0163163_10005898 3300014325 Bacteria 10662
91 Ga0163163_10009460 3300014325 Bacteria 8702
92 Ga0163163_10012129 3300014325 Bacteria 7841
93 Ga0157380_10004133 3300014326 Bacteria 10029
94 Ga0157380_10010823 3300014326 Bacteria 6578
95 Ga0207653_10000356 3300025885 Bacteria 22472
96 Ga0207710_10000546 3300025900 Bacteria 22630
97 Ga0207647_10004898 3300025904 Bacteria 9880
98 Ga0207643_10000986 3300025908 Bacteria 17038
99 Ga0207684_10000251 3300025910 Bacteria 80339
100 Ga0207707_10015640 3300025912 Bacteria 6610
101 Ga0207695_10069547 3300025913 Bacteria 3602
102 Ga0207671_10001913 3300025914 Bacteria 23118
103 Ga0207671_10009528 3300025914 Bacteria 8107
104 Ga0207652_10017344 3300025921 Bacteria 5892
105 Ga0207681_10005282 3300025923 Bacteria 7935
106 Ga0207681_10006986 3300025923 Bacteria 6928
107 Ga0207694_10000994 3300025924 Bacteria 24824
108 Ga0207694_10009843 3300025924 Bacteria 7220
109 Ga0207650_10000017 3300025925 Bacteria 354674
110 Ga0207706_10008193 3300025933 Bacteria 9639
111 Ga0207686_10000008 3300025934 Bacteria 245575
112 Ga0207686_10000291 3300025934 Bacteria 37159
113 Ga0207709_10000025 3300025935 Bacteria 364795
114 Ga0207670_10000352 3300025936 Bacteria 27297
115 Ga0207711_10024945 3300025941 Bacteria 5014
116 Ga0207711_10038954 3300025941 Bacteria 4042
117 Ga0207712_10007080 3300025961 Bacteria 7073
118 Ga0207703_10034842 3300026035 Bacteria 3997
119 Ga0207703_10049608 3300026035 Bacteria 3394
120 Ga0207708_10000741 3300026075 Bacteria 24495
121 Ga0207708_10003028 3300026075 Bacteria 12394
122 Ga0207708_10009612 3300026075 Bacteria 7169
123 Ga0207708_10018845 3300026075 Bacteria 5198
124 Ga0207708_10025650 3300026075 Unclassified 4460
125 Ga0207708_10026780 3300026075 Bacteria 4365
126 Ga0207708_10034074 3300026075 Bacteria 3872
127 Ga0207676_10002401 3300026095 Bacteria 13362
128 Ga0207674_10001237 3300026116 Bacteria 33330
129 Ga0207674_10032172 3300026116 Bacteria 5502
130 Ga0207674_10078162 3300026116 Unclassified 3314
131 Ga0207675_100011772 3300026118 Bacteria 8177
132 Ga0207675_100022403 3300026118 Bacteria 5884
133 Ga0207428_10003107 3300027907 Bacteria 16314
134 Ga0207428_10009150 3300027907 Bacteria 8898
135 Ga0268265_10020672 3300028380 Bacteria 4599
136 Ga0436365_1468983 3300039437 Bacteria 43990
137 Ga0495663_0000071 3300046525 Bacteria 46734
138 Ga0495598_0000066 3300046537 Bacteria 17154
139 Ga0495621_0000107 3300046539 Bacteria 17174
140 Ga0501290_001918 3300049513 Bacteria 2742
141 Ga0501296_000369 3300049519 Bacteria 4507
142 Ga0501298_000063 3300049521 Bacteria 11368
143 Ga0501299_000965 3300049522 Bacteria 3570
144 Ga0501076_0017045 3300049592 Bacteria 5516
145 Ga0501207_000262 3300049654 Bacteria 5449
146 Ga0501225_0000783 3300049705 Bacteria 9940
147 Ga0501225_0006151 3300049705 Bacteria 3507
148 Ga0501234_000643 3300049707 Bacteria 5386
149 Ga0501045_0004180 3300049824 Bacteria 9972
150 Ga0501226_000609 3300049853 Unclassified 4905
151 nmdc:mga09592_3694_c1 3300050508 Bacteria 12333
152 nmdc:mga06r32_23778_c1 3300050510 Bacteria 5676
153 nmdc:mga08y16_116783_c1 3300050511 Bacteria 2778
154 nmdc:mga08y16_2458_c1 3300050511 Bacteria 19017
155 nmdc:mga08y16_25151_c1 3300050511 Bacteria 6280
156 nmdc:mga08y16_31142_c1 3300050511 Bacteria 5613
157 nmdc:mga08y16_45221_c1 3300050511 Bacteria 4613
158 nmdc:mga08y16_46352_c1 3300050511 Bacteria 4551
159 nmdc:mga08y16_48050_c1 3300050511 Bacteria 4466
160 nmdc:mga08y16_49516_c1 3300050511 Bacteria 4397
161 Ga0501082_0005469 3300060353 Bacteria 11030

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026116 Ga0207674_10078162 Ga0207674_100781621 810
2 3300005719 Ga0068861_100014706 Ga0068861_1000147062 820
3 3300049513 Ga0501290_001918 Ga0501290_001918_32_2623 862
4 3300049519 Ga0501296_000369 Ga0501296_000369_1852_4443 862
5 3300026035 Ga0207703_10049608 Ga0207703_100496082 873
6 3300050508 nmdc:mga09592_3694_c1 nmdc:mga09592_3694_c1_9666_12308 878
7 3300050510 nmdc:mga06r32_23778_c1 nmdc:mga06r32_23778_c1_26_2668 878
8 3300050511 nmdc:mga08y16_45221_c1 nmdc:mga08y16_45221_c1_13_2757 893
9 3300050511 nmdc:mga08y16_116783_c1 nmdc:mga08y16_116783_c1_12_2753 913
10 3300009551 Ga0105238_10001162 Ga0105238_1000116216 924
11 3300009094 Ga0111539_10011139 Ga0111539_100111399 937
12 3300050511 nmdc:mga08y16_46352_c1 nmdc:mga08y16_46352_c1_1125_4199 939
13 3300005340 Ga0070689_100000729 Ga0070689_10000072910 943
14 3300013306 Ga0163162_10014542 Ga0163162_100145423 947
15 3300013297 Ga0157378_10024806 Ga0157378_100248061 950
16 3300014326 Ga0157380_10010823 Ga0157380_100108232 950
17 3300005457 Ga0070662_100022435 Ga0070662_1000224352 953
18 3300005549 Ga0070704_100011780 Ga0070704_1000117802 953
19 3300005844 Ga0068862_100007256 Ga0068862_1000072561 953
20 3300027907 Ga0207428_10003107 Ga0207428_100031075 953
21 3300009148 Ga0105243_10000027 Ga0105243_100000276 954
22 3300009176 Ga0105242_10000056 Ga0105242_100000566 954
23 3300009177 Ga0105248_10055998 Ga0105248_100559982 959
24 3300049592 Ga0501076_0017045 Ga0501076_0017045_2128_5268 959
25 3300049824 Ga0501045_0004180 Ga0501045_0004180_3269_6409 959
26 3300060353 Ga0501082_0005469 Ga0501082_0005469_1202_4342 959
27 3300049654 Ga0501207_000262 Ga0501207_000262_1787_4672 960
28 3300049705 Ga0501225_0000783 Ga0501225_0000783_6333_9218 960
29 3300049853 Ga0501226_000609 Ga0501226_000609_1074_3959 960
30 3300009094 Ga0111539_10008603 Ga0111539_100086032 961
31 3300050511 nmdc:mga08y16_2458_c1 nmdc:mga08y16_2458_c1_4849_7770 961
32 3300005467 Ga0070706_100000193 Ga0070706_10000019325 969
33 3300025910 Ga0207684_10000251 Ga0207684_1000025135 969
34 3300039437 Ga0436365_1468983 Ga0436365_1468983_35244_38429 971
35 3300009101 Ga0105247_10000291 Ga0105247_1000029117 972
36 3300025900 Ga0207710_10000546 Ga0207710_1000054618 972
37 3300009147 Ga0114129_10023635 Ga0114129_100236353 974
38 3300050511 nmdc:mga08y16_31142_c1 nmdc:mga08y16_31142_c1_2212_5199 975
39 3300009147 Ga0114129_10027461 Ga0114129_100274612 977
40 3300005618 Ga0068864_100061703 Ga0068864_1000617031 978
41 3300025908 Ga0207643_10000986 Ga0207643_100009866 978
42 3300026095 Ga0207676_10002401 Ga0207676_100024012 978
43 3300026116 Ga0207674_10032172 Ga0207674_100321723 979
44 3300005337 Ga0070682_100001505 Ga0070682_10000150510 982
45 3300005834 Ga0068851_10000462 Ga0068851_100004626 982
46 3300009147 Ga0114129_10033316 Ga0114129_100333164 982
47 3300009545 Ga0105237_10000837 Ga0105237_1000083712 982
48 3300009553 Ga0105249_10055678 Ga0105249_100556782 982
49 3300025914 Ga0207671_10001913 Ga0207671_1000191319 982
50 3300025913 Ga0207695_10069547 Ga0207695_100695472 983
51 3300025933 Ga0207706_10008193 Ga0207706_100081934 983
52 3300026075 Ga0207708_10026780 Ga0207708_100267802 983
53 3300009551 Ga0105238_10023363 Ga0105238_100233632 984
54 3300006846 Ga0075430_100010378 Ga0075430_1000103783 985
55 3300009176 Ga0105242_10001172 Ga0105242_100011725 985
56 3300025934 Ga0207686_10000291 Ga0207686_100002914 985
57 3300025934 Ga0207686_10000008 Ga0207686_100000086 986
58 3300027907 Ga0207428_10009150 Ga0207428_100091501 987
59 3300050511 nmdc:mga08y16_25151_c1 nmdc:mga08y16_25151_c1_293_3265 988
60 3300005444 Ga0070694_100014057 Ga0070694_1000140572 989
61 3300005545 Ga0070695_100000455 Ga0070695_1000004558 989
62 3300005546 Ga0070696_100001202 Ga0070696_1000012028 989
63 3300013100 Ga0157373_10008017 Ga0157373_100080174 991
64 3300014325 Ga0163163_10000142 Ga0163163_1000014225 991
65 3300009094 Ga0111539_10021659 Ga0111539_100216592 995
66 3300026075 Ga0207708_10034074 Ga0207708_100340743 996
67 3300046525 Ga0495663_0000071 Ga0495663_0000071_7485_10502 996
68 3300046537 Ga0495598_0000066 Ga0495598_0000066_12470_15487 996
69 3300046539 Ga0495621_0000107 Ga0495621_0000107_9287_12304 996
70 3300006914 Ga0075436_100021775 Ga0075436_1000217752 997
71 3300025941 Ga0207711_10024945 Ga0207711_100249452 997
72 3300005353 Ga0070669_100008282 Ga0070669_1000082823 998
73 3300005459 Ga0068867_100035424 Ga0068867_1000354242 998
74 3300005617 Ga0068859_100014444 Ga0068859_1000144442 998
75 3300006931 Ga0097620_100014444 Ga0097620_1000144442 998
76 3300009553 Ga0105249_10002944 Ga0105249_100029448 998
77 3300025923 Ga0207681_10005282 Ga0207681_100052823 998
78 3300026075 Ga0207708_10000741 Ga0207708_1000074111 998
79 3300028380 Ga0268265_10020672 Ga0268265_100206722 998
80 3300005290 Ga0065712_10010232 Ga0065712_100102322 999
81 3300005345 Ga0070692_10008695 Ga0070692_100086952 1000
82 3300005406 Ga0070703_10000458 Ga0070703_100004585 1000
83 3300005441 Ga0070700_100005641 Ga0070700_1000056414 1000
84 3300005441 Ga0070700_100007087 Ga0070700_1000070872 1000
85 3300005444 Ga0070694_100004202 Ga0070694_1000042023 1000
86 3300005444 Ga0070694_100026421 Ga0070694_1000264211 1000
87 3300005844 Ga0068862_100021510 Ga0068862_1000215102 1000
88 3300006237 Ga0097621_100012367 Ga0097621_1000123673 1000
89 3300006847 Ga0075431_100004774 Ga0075431_1000047749 1000
90 3300006880 Ga0075429_100006045 Ga0075429_1000060455 1000
91 3300009553 Ga0105249_10037906 Ga0105249_100379062 1000
92 3300013306 Ga0163162_10046412 Ga0163162_100464122 1000
93 3300014326 Ga0157380_10004133 Ga0157380_100041335 1000
94 3300025885 Ga0207653_10000356 Ga0207653_100003565 1000
95 3300025935 Ga0207709_10000025 Ga0207709_10000025136 1000
96 3300026075 Ga0207708_10009612 Ga0207708_100096122 1000
97 3300026075 Ga0207708_10018845 Ga0207708_100188452 1000
98 3300026118 Ga0207675_100022403 Ga0207675_1000224033 1000
99 3300005331 Ga0070670_100046476 Ga0070670_1000464761 1001
100 3300005344 Ga0070661_100005186 Ga0070661_1000051864 1001
101 3300005366 Ga0070659_100002568 Ga0070659_1000025689 1001
102 3300005458 Ga0070681_10001621 Ga0070681_100016219 1001
103 3300005530 Ga0070679_100006454 Ga0070679_1000064548 1001
104 3300005564 Ga0070664_100000254 Ga0070664_10000025422 1001
105 3300009177 Ga0105248_10002017 Ga0105248_100020175 1001
106 3300009177 Ga0105248_10038204 Ga0105248_100382042 1001
107 3300013296 Ga0157374_10038222 Ga0157374_100382222 1001
108 3300013297 Ga0157378_10001855 Ga0157378_100018558 1001
109 3300013297 Ga0157378_10025176 Ga0157378_100251762 1001
110 3300013306 Ga0163162_10001025 Ga0163162_1000102512 1001
111 3300014325 Ga0163163_10012129 Ga0163163_100121294 1001
112 3300025912 Ga0207707_10015640 Ga0207707_100156402 1001
113 3300025921 Ga0207652_10017344 Ga0207652_100173442 1001
114 3300025941 Ga0207711_10038954 Ga0207711_100389542 1001
115 3300026116 Ga0207674_10001237 Ga0207674_100012372 1001
116 3300005617 Ga0068859_100020485 Ga0068859_1000204852 1002
117 3300005719 Ga0068861_100044980 Ga0068861_1000449802 1002
118 3300005937 Ga0081455_10023103 Ga0081455_100231032 1002
119 3300006931 Ga0097620_100020483 Ga0097620_1000204832 1002
120 3300026075 Ga0207708_10025650 Ga0207708_100256502 1002
121 3300050511 nmdc:mga08y16_49516_c1 nmdc:mga08y16_49516_c1_215_3238 1002
122 3300005337 Ga0070682_100000128 Ga0070682_1000001287 1003
123 3300005330 Ga0070690_100001684 Ga0070690_1000016846 1005
124 3300005337 Ga0070682_100001391 Ga0070682_1000013913 1006
125 3300005445 Ga0070708_100013373 Ga0070708_1000133732 1006
126 3300005518 Ga0070699_100032718 Ga0070699_1000327181 1006
127 3300005536 Ga0070697_100020293 Ga0070697_1000202931 1006
128 3300005843 Ga0068860_100012751 Ga0068860_1000127512 1006
129 3300006358 Ga0068871_100003113 Ga0068871_1000031137 1006
130 3300009147 Ga0114129_10033441 Ga0114129_100334412 1006
131 3300025904 Ga0207647_10004898 Ga0207647_100048982 1006
132 3300025924 Ga0207694_10009843 Ga0207694_100098432 1006
133 3300014325 Ga0163163_10005898 Ga0163163_100058985 1007
134 3300005337 Ga0070682_100003409 Ga0070682_1000034092 1008
135 3300005440 Ga0070705_100008012 Ga0070705_1000080122 1008
136 3300005616 Ga0068852_100018169 Ga0068852_1000181692 1008
137 3300009094 Ga0111539_10004234 Ga0111539_1000423412 1008
138 3300014325 Ga0163163_10009460 Ga0163163_100094606 1008
139 3300025914 Ga0207671_10009528 Ga0207671_100095284 1008
140 3300025936 Ga0207670_10000352 Ga0207670_100003524 1008
141 3300049521 Ga0501298_000063 Ga0501298_000063_5691_8720 1008
142 3300049522 Ga0501299_000965 Ga0501299_000965_27_3056 1008
143 3300049705 Ga0501225_0006151 Ga0501225_0006151_426_3455 1008
144 3300049707 Ga0501234_000643 Ga0501234_000643_1221_4250 1008
145 3300050511 nmdc:mga08y16_48050_c1 nmdc:mga08y16_48050_c1_1065_4091 1008
146 3300002459 JGI24751J29686_10000015 JGI24751J29686_1000001552 1009
147 3300005536 Ga0070697_100051372 Ga0070697_1000513721 1009
148 3300005719 Ga0068861_100006226 Ga0068861_1000062263 1009
149 3300006844 Ga0075428_100011300 Ga0075428_1000113002 1009
150 3300009094 Ga0111539_10013474 Ga0111539_100134742 1009
151 3300009147 Ga0114129_10011569 Ga0114129_100115694 1009
152 3300009553 Ga0105249_10001330 Ga0105249_100013305 1009
153 3300013297 Ga0157378_10020128 Ga0157378_100201282 1009
154 3300013307 Ga0157372_10008512 Ga0157372_100085123 1009
155 3300025923 Ga0207681_10006986 Ga0207681_100069864 1009
156 3300025924 Ga0207694_10000994 Ga0207694_1000099414 1009
157 3300025925 Ga0207650_10000017 Ga0207650_1000001757 1009
158 3300025961 Ga0207712_10007080 Ga0207712_100070803 1009
159 3300026035 Ga0207703_10034842 Ga0207703_100348422 1009
160 3300026075 Ga0207708_10003028 Ga0207708_100030284 1009
161 3300026118 Ga0207675_100011772 Ga0207675_1000117723 1009

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

121

202

0.98

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

122

212

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.918 35 117
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8862 35 117
4v4c-assembly3.cif.gz_F crystal structure of pyrogallol-phloroglucinol transhydroxylase from pelobacter acidigallici 0.8545 31 115
3hgi-assembly1.cif.gz_A crystal structure of catechol 1,2-dioxygenase from the gram-positive rhodococcus opacus 1cp 0.8356 30 117
3th1-assembly1.cif.gz_A-2 crystal structure of chlorocatechol 1,2-dioxygenase from pseudomonas putida 0.8342 30 115
ID Description Score Start End Superfamily
af_E7FFQ7_314_405_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9261 35 117 2.60.40.1120
af_Q9JHW1_1212_1304_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9253 35 116 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9061 35 117 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8851 35 117 2.60.40.1120
af_I1NH52_350_429_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8714 35 117 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A7W3LTH8-F1-model_v4 EmrB/QacA subfamily drug resistance transporter 0.9309 32 114 GO:0005886
GO:0005975
GO:0022857
AF-A0A355UVY8-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.903 30 127
AF-A0A3D6EHI3-F1-model_v4 TonB-dependent receptor 0.8818 30 128
AF-A0A2V8TH66-F1-model_v4 TonB-dependent receptor plug domain-containing protein 0.8792 141 886 GO:0009279
GO:0015344
AF-A0A7V9CJH6-F1-model_v4 TonB-dependent receptor 0.8754 53 740 GO:0009279
GO:0015344

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pLDDT pTM Quality
74.55 0.79 High
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Predicted Structure (AlphaFold2)

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