F235080

General Info

Members Datasets Scaffolds Average Seq Length
160 75 160 303

Family's Representative Sequence

Representative Sequence 3300035695|Ga0373927_0274954|Ga0373927_0274954_19_1071
Length 350
Sequence LAGAISNLKIVRRLGITYAAGEPRREVGMNLKRRAFLLFVTLMAGAAMPAWAQTATPAAGPANGGAFSGIWSHPSFPGFEPPASGPGPVVNKSRRPQADFNGRVLPAKNDVLVSNPAQLVGDYTNPILKPQAAEVVKKKGEMELSGMVSPTPTIQCWPEPVPYIFNGVAMQMLQQPSKIIFLYPNDHQVRYVRMNVPHRAPVTPSWYGDSVGHNEDDTLVIDTVGVKIGPFAMVDFYGTPYTQALHLVERYRLLDYEAAKEGLERDSRENLRPATGADAGSAPDYSYRGKHLQLQFTVEDEGVFTMPWSATITYRRAAEAWREVVCAENTRELAIAGRATAVPTANRPDF

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
10 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
17 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
23 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
24 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
25 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
26 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
33 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
34 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
37 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
38 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
39 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
40 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
41 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
42 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
43 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
44 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
45 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
46 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
47 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
48 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
54 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
55 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
56 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
57 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
58 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
61 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
62 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
63 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
66 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
67 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
70 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
71 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
72 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
73 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
74 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
75 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.62
Nodule 0
Rhizoplane 2.5
Rhizosphere 86.25
Stem 0
Stem Tuber 0
Unclassified 10.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100248961 3300005331 Bacteria 1548
2 Ga0070689_100040978 3300005340 Bacteria 3553
3 Ga0070689_100232813 3300005340 Unclassified 1515
4 Ga0070688_100164823 3300005365 Unclassified 1525
5 Ga0070713_100145066 3300005436 Unclassified 2106
6 Ga0070713_100257093 3300005436 Unclassified 1595
7 Ga0070710_10103401 3300005437 Bacteria 1700
8 Ga0070710_10172976 3300005437 Bacteria 1347
9 Ga0070678_100066433 3300005456 Bacteria 2681
10 Ga0070678_100386695 3300005456 Unclassified 1212
11 Ga0070681_10150281 3300005458 Bacteria 2256
12 Ga0070679_100086332 3300005530 Bacteria 3125
13 Ga0070696_100074872 3300005546 Bacteria 2388
14 Ga0081540_1029577 3300005983 Unclassified 3048
15 Ga0070717_10111745 3300006028 Bacteria 2332
16 Ga0070712_100249378 3300006175 Unclassified 1418
17 Ga0070712_100332276 3300006175 Unclassified 1239
18 Ga0075367_10025723 3300006178 Bacteria 3331
19 Ga0097621_100110942 3300006237 Unclassified 2317
20 Ga0075430_100212768 3300006846 Unclassified 1604
21 Ga0099794_10009199 3300007265 Bacteria 4140
22 Ga0099794_10015992 3300007265 Bacteria 3320
23 Ga0099794_10037159 3300007265 Bacteria 2305
24 Ga0099795_10006777 3300007788 Bacteria 3146
25 Ga0099795_10081943 3300007788 Unclassified 1236
26 Ga0099795_10104696 3300007788 Bacteria 1114
27 Ga0099795_10115141 3300007788 Bacteria 1070
28 Ga0111539_10041576 3300009094 Bacteria 5525
29 Ga0111539_10113434 3300009094 Bacteria 3179
30 Ga0111539_10636162 3300009094 Unclassified 1242
31 Ga0114129_10911263 3300009147 Bacteria 1113
32 Ga0105242_10107392 3300009176 Bacteria 2374
33 Ga0105242_10278493 3300009176 Bacteria 1518
34 Ga0105242_10290615 3300009176 Bacteria 1488
35 Ga0105242_10578959 3300009176 Unclassified 1081
36 Ga0105248_10462824 3300009177 Bacteria 1430
37 Ga0099796_10027052 3300010159 Bacteria 1828
38 Ga0099796_10031025 3300010159 Unclassified 1740
39 Ga0099796_10067838 3300010159 Unclassified 1280
40 Ga0099796_10093576 3300010159 Unclassified 1120
41 Ga0105246_10186269 3300011119 Unclassified 1603
42 Ga0213874_10042759 3300021377 Unclassified 1362
43 Ga0213875_10085579 3300021388 Bacteria 1471
44 Ga0213875_10106786 3300021388 Unclassified 1307
45 Ga0207693_10213344 3300025915 Bacteria 1517
46 Ga0207652_10112176 3300025921 Bacteria 2419
47 Ga0207659_10349881 3300025926 Unclassified 1226
48 Ga0207700_10131804 3300025928 Unclassified 2042
49 Ga0207670_10210159 3300025936 Bacteria 1484
50 Ga0207670_10281415 3300025936 Unclassified 1296
51 Ga0209588_1011684 3300027671 Bacteria 2656
52 Ga0209588_1011726 3300027671 Bacteria 2651
53 Ga0207428_10050476 3300027907 Bacteria 3328
54 Ga0265337_1000425 3300028556 Bacteria 22414
55 Ga0265337_1001788 3300028556 Bacteria 10364
56 Ga0265334_10000790 3300028573 Bacteria 15826
57 Ga0265334_10002615 3300028573 Bacteria 8393
58 Ga0265338_10004201 3300028800 Bacteria 19644
59 Ga0265338_10012325 3300028800 Bacteria 9754
60 Ga0265338_10027395 3300028800 Bacteria 5718
61 Ga0265316_10067088 3300031344 Bacteria 2775
62 Ga0265314_10113885 3300031711 Bacteria 1714
63 Ga0373951_0030467 3300035091 Unclassified 1270
64 Ga0373936_0241685 3300035113 Unclassified 805
65 Ga0373945_0078358 3300035116 Bacteria 1262
66 Ga0373954_0114403 3300035118 Unclassified 1307
67 Ga0373954_0158271 3300035118 Unclassified 1108
68 Ga0373943_0011827 3300035170 Bacteria 3926
69 Ga0373955_0039888 3300035172 Bacteria 2509
70 Ga0373955_0046346 3300035172 Bacteria 2350
71 Ga0373931_0008870 3300035691 Bacteria 4788
72 Ga0373931_0013550 3300035691 Bacteria 3972
73 Ga0373931_0014265 3300035691 Bacteria 3881
74 Ga0373931_0022968 3300035691 Unclassified 3144
75 Ga0373931_0087093 3300035691 Bacteria 1734
76 Ga0373931_0104480 3300035691 Unclassified 1598
77 Ga0373935_0003590 3300035692 Bacteria 9045
78 Ga0373935_0047103 3300035692 Bacteria 2725
79 Ga0373935_0097758 3300035692 Bacteria 1931
80 Ga0373935_0135461 3300035692 Bacteria 1659
81 Ga0373935_0172381 3300035692 Bacteria 1481
82 Ga0373935_0271241 3300035692 Bacteria 1192
83 Ga0373927_0012795 3300035695 Bacteria 5581
84 Ga0373927_0020589 3300035695 Unclassified 4325
85 Ga0373927_0064146 3300035695 Bacteria 2376
86 Ga0373927_0146908 3300035695 Bacteria 1544
87 Ga0373927_0274954 3300035695 Bacteria 1108
88 Ga0373927_0334179 3300035695 Unclassified 998
89 Ga0373933_0060882 3300035724 Unclassified 2277
90 Ga0373933_0071923 3300035724 Bacteria 2106
91 Ga0373947_0056137 3300035725 Bacteria 2379
92 Ga0373937_0009230 3300036401 Bacteria 8563
93 Ga0373937_0010202 3300036401 Bacteria 8198
94 Ga0373937_0014601 3300036401 Bacteria 6935
95 Ga0373937_0018295 3300036401 Bacteria 6255
96 Ga0373937_0028170 3300036401 Bacteria 5082
97 Ga0373937_0072899 3300036401 Bacteria 3167
98 Ga0373937_0093633 3300036401 Bacteria 2786
99 Ga0373937_0207884 3300036401 Bacteria 1841
100 Ga0373937_0331085 3300036401 Bacteria 1441
101 Ga0373937_0538618 3300036401 Unclassified 1109
102 Ga0373925_0043444 3300037068 Bacteria 3336
103 Ga0373925_0240101 3300037068 Bacteria 1451
104 Ga0373925_0245000 3300037068 Bacteria 1436
105 Ga0373925_0296131 3300037068 Unclassified 1306
106 Ga0373925_0473169 3300037068 Unclassified 1027
107 Ga0436364_0217370 3300037853 Bacteria 1699
108 Ga0436364_0301688 3300037853 Bacteria 2975
109 Ga0436364_0413834 3300037853 Bacteria 1313
110 Ga0436364_0482555 3300037853 Bacteria 1284
111 Ga0436364_1002594 3300037853 Bacteria 2474
112 Ga0436364_1068593 3300037853 Bacteria 2320
113 Ga0436364_1161830 3300037853 Bacteria 1874
114 Ga0436365_0449328 3300039437 Bacteria 1641
115 Ga0436360_1175317 3300039438 Bacteria 1354
116 Ga0436363_0089350 3300039450 Bacteria 5504
117 Ga0436363_0089464 3300039450 Bacteria 2367
118 Ga0436363_0174826 3300039450 Bacteria 2616
119 Ga0436363_0405408 3300039450 Bacteria 1245
120 Ga0436363_0488668 3300039450 Unclassified 1105
121 Ga0436363_0577553 3300039450 Bacteria 3962
122 Ga0495603_0192617 3300046455 Bacteria 1179
123 Ga0495580_0322576 3300046472 Unclassified 1050
124 Ga0495582_0062505 3300046473 Bacteria 2057
125 Ga0495582_0070636 3300046473 Unclassified 1932
126 Ga0495664_0089752 3300046477 Bacteria 1848
127 Ga0495664_0181316 3300046477 Unclassified 1277
128 Ga0495630_0345872 3300046517 Unclassified 1138
129 Ga0495665_0016915 3300046531 Bacteria 3924
130 Ga0495665_0201804 3300046531 Unclassified 1031
131 Ga0495640_0007904 3300046533 Bacteria 8362
132 Ga0495640_0051747 3300046533 Bacteria 2822
133 Ga0495640_0088645 3300046533 Bacteria 2045
134 Ga0495640_0145791 3300046533 Bacteria 1523
135 Ga0495640_0150181 3300046533 Unclassified 1497
136 Ga0495586_0014709 3300046535 Unclassified 4158
137 Ga0495634_0103006 3300046642 Bacteria 1843
138 Ga0495613_0251332 3300046689 Unclassified 1234
139 Ga0495624_0114224 3300046690 Bacteria 1660
140 Ga0495624_0174731 3300046690 Bacteria 1310
141 Ga0495624_0204233 3300046690 Bacteria 1200
142 Ga0495674_0058569 3300047319 Unclassified 3367
143 Ga0495674_0059391 3300047319 Bacteria 3340
144 Ga0495674_0280771 3300047319 Unclassified 1364
145 Ga0495674_0281452 3300047319 Unclassified 1362
146 Ga0495674_0288299 3300047319 Bacteria 1343
147 Ga0495674_0309622 3300047319 Unclassified 1289
148 Ga0495674_0389981 3300047319 Bacteria 1125
149 Ga0496100_0048222 3300048903 Bacteria 2749
150 Ga0496105_0242012 3300048908 Bacteria 1464
151 Ga0496110_0101311 3300048913 Bacteria 2582
152 Ga0496115_0096727 3300048918 Unclassified 2418
153 nmdc:mga05p37_650877_c1 3300050507 Bacteria 1180
154 nmdc:mga0qj67_246035_c1 3300050509 Unclassified 1451
155 nmdc:mga08y16_117905_c1 3300050511 Bacteria 2763
156 nmdc:mga08y16_229727_c1 3300050511 Bacteria 1919
157 nmdc:mga08y16_287247_c1 3300050511 Bacteria 1696
158 nmdc:mga08y16_94118_c1 3300050511 Unclassified 3121
159 nmdc:mga0n895_32245_c1 3300050512 Bacteria 5028
160 nmdc:mga0a205_51955_c1 3300050515 Bacteria 3956

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035113 Ga0373936_0241685 Ga0373936_0241685_76_786 230
2 3300046531 Ga0495665_0201804 Ga0495665_0201804_77_787 230
3 3300046689 Ga0495613_0251332 Ga0495613_0251332_167_877 230
4 3300046477 Ga0495664_0181316 Ga0495664_0181316_303_1091 236
5 3300035172 Ga0373955_0046346 Ga0373955_0046346_342_1274 244
6 3300009176 Ga0105242_10578959 Ga0105242_105789591 255
7 3300035692 Ga0373935_0097758 Ga0373935_0097758_845_1831 257
8 3300035692 Ga0373935_0047103 Ga0373935_0047103_1392_2372 260
9 3300036401 Ga0373937_0014601 Ga0373937_0014601_5367_6347 260
10 3300046455 Ga0495603_0192617 Ga0495603_0192617_10_939 263
11 3300046473 Ga0495582_0062505 Ga0495582_0062505_221_1150 263
12 3300047319 Ga0495674_0288299 Ga0495674_0288299_282_1211 263
13 3300007265 Ga0099794_10015992 Ga0099794_100159922 267
14 3300035695 Ga0373927_0064146 Ga0373927_0064146_1362_2330 268
15 3300005437 Ga0070710_10103401 Ga0070710_101034012 269
16 3300007788 Ga0099795_10115141 Ga0099795_101151411 269
17 3300035692 Ga0373935_0003590 Ga0373935_0003590_6968_7888 269
18 3300036401 Ga0373937_0018295 Ga0373937_0018295_1076_1930 269
19 3300037068 Ga0373925_0043444 Ga0373925_0043444_2254_3174 269
20 3300046533 Ga0495640_0007904 Ga0495640_0007904_2714_3634 269
21 3300046642 Ga0495634_0103006 Ga0495634_0103006_206_1126 269
22 3300035118 Ga0373954_0114403 Ga0373954_0114403_333_1196 270
23 3300035172 Ga0373955_0039888 Ga0373955_0039888_874_1737 270
24 3300035695 Ga0373927_0334179 Ga0373927_0334179_83_973 270
25 3300035724 Ga0373933_0060882 Ga0373933_0060882_914_1777 270
26 3300036401 Ga0373937_0207884 Ga0373937_0207884_817_1680 270
27 3300037853 Ga0436364_0217370 Ga0436364_0217370_698_1639 270
28 3300039450 Ga0436363_0089464 Ga0436363_0089464_127_1107 270
29 3300046533 Ga0495640_0088645 Ga0495640_0088645_41_913 270
30 3300046690 Ga0495624_0204233 Ga0495624_0204233_70_1020 270
31 3300047319 Ga0495674_0280771 Ga0495674_0280771_388_1272 270
32 3300048918 Ga0496115_0096727 Ga0496115_0096727_165_1061 270
33 3300010159 Ga0099796_10031025 Ga0099796_100310251 271
34 3300039450 Ga0436363_0089350 Ga0436363_0089350_1405_2298 271
35 3300006028 Ga0070717_10111745 Ga0070717_101117453 272
36 3300035691 Ga0373931_0104480 Ga0373931_0104480_628_1515 272
37 3300035695 Ga0373927_0012795 Ga0373927_0012795_722_1690 272
38 3300035695 Ga0373927_0020589 Ga0373927_0020589_2968_3915 272
39 3300005436 Ga0070713_100257093 Ga0070713_1002570931 273
40 3300035695 Ga0373927_0274954 Ga0373927_0274954_19_1071 273
41 3300037068 Ga0373925_0240101 Ga0373925_0240101_283_1233 273
42 3300039437 Ga0436365_0449328 Ga0436365_0449328_371_1291 273
43 3300047319 Ga0495674_0281452 Ga0495674_0281452_274_1224 273
44 3300050511 nmdc:mga08y16_94118_c1 nmdc:mga08y16_94118_c1_159_1055 273
45 3300021388 Ga0213875_10085579 Ga0213875_100855792 274
46 3300036401 Ga0373937_0028170 Ga0373937_0028170_791_1681 274
47 3300037853 Ga0436364_1002594 Ga0436364_1002594_516_1433 274
48 3300039450 Ga0436363_0405408 Ga0436363_0405408_39_974 274
49 3300039450 Ga0436363_0488668 Ga0436363_0488668_49_1017 274
50 3300005340 Ga0070689_100232813 Ga0070689_1002328132 275
51 3300005436 Ga0070713_100145066 Ga0070713_1001450662 275
52 3300005983 Ga0081540_1029577 Ga0081540_10295771 275
53 3300006178 Ga0075367_10025723 Ga0075367_100257233 275
54 3300009094 Ga0111539_10041576 Ga0111539_100415764 275
55 3300009094 Ga0111539_10113434 Ga0111539_101134341 275
56 3300009147 Ga0114129_10911263 Ga0114129_109112632 275
57 3300009176 Ga0105242_10107392 Ga0105242_101073923 275
58 3300021388 Ga0213875_10106786 Ga0213875_101067861 275
59 3300025928 Ga0207700_10131804 Ga0207700_101318042 275
60 3300025936 Ga0207670_10281415 Ga0207670_102814151 275
61 3300027907 Ga0207428_10050476 Ga0207428_100504762 275
62 3300028573 Ga0265334_10002615 Ga0265334_100026157 275
63 3300028800 Ga0265338_10004201 Ga0265338_1000420115 275
64 3300035091 Ga0373951_0030467 Ga0373951_0030467_184_1164 275
65 3300035170 Ga0373943_0011827 Ga0373943_0011827_1313_2254 275
66 3300035691 Ga0373931_0008870 Ga0373931_0008870_1480_2460 275
67 3300035692 Ga0373935_0135461 Ga0373935_0135461_213_1154 275
68 3300035695 Ga0373927_0146908 Ga0373927_0146908_293_1234 275
69 3300037068 Ga0373925_0245000 Ga0373925_0245000_479_1420 275
70 3300037853 Ga0436364_0413834 Ga0436364_0413834_249_1151 275
71 3300037853 Ga0436364_1068593 Ga0436364_1068593_201_1145 275
72 3300046517 Ga0495630_0345872 Ga0495630_0345872_187_1089 275
73 3300050507 nmdc:mga05p37_650877_c1 nmdc:mga05p37_650877_c1_239_1168 275
74 3300050511 nmdc:mga08y16_117905_c1 nmdc:mga08y16_117905_c1_894_1787 275
75 3300050512 nmdc:mga0n895_32245_c1 nmdc:mga0n895_32245_c1_3901_4830 275
76 3300050515 nmdc:mga0a205_51955_c1 nmdc:mga0a205_51955_c1_2913_3842 275
77 3300005546 Ga0070696_100074872 Ga0070696_1000748722 276
78 3300006175 Ga0070712_100249378 Ga0070712_1002493782 276
79 3300006175 Ga0070712_100332276 Ga0070712_1003322762 276
80 3300006846 Ga0075430_100212768 Ga0075430_1002127682 276
81 3300007265 Ga0099794_10009199 Ga0099794_100091992 276
82 3300007265 Ga0099794_10037159 Ga0099794_100371592 276
83 3300007788 Ga0099795_10006777 Ga0099795_100067772 276
84 3300007788 Ga0099795_10104696 Ga0099795_101046961 276
85 3300009094 Ga0111539_10636162 Ga0111539_106361622 276
86 3300009176 Ga0105242_10278493 Ga0105242_102784932 276
87 3300009176 Ga0105242_10290615 Ga0105242_102906152 276
88 3300010159 Ga0099796_10067838 Ga0099796_100678382 276
89 3300010159 Ga0099796_10093576 Ga0099796_100935761 276
90 3300021377 Ga0213874_10042759 Ga0213874_100427591 276
91 3300025915 Ga0207693_10213344 Ga0207693_102133442 276
92 3300027671 Ga0209588_1011684 Ga0209588_10116843 276
93 3300027671 Ga0209588_1011726 Ga0209588_10117264 276
94 3300028556 Ga0265337_1001788 Ga0265337_10017885 276
95 3300028800 Ga0265338_10027395 Ga0265338_100273955 276
96 3300031344 Ga0265316_10067088 Ga0265316_100670882 276
97 3300031711 Ga0265314_10113885 Ga0265314_101138852 276
98 3300035116 Ga0373945_0078358 Ga0373945_0078358_72_1010 276
99 3300035691 Ga0373931_0013550 Ga0373931_0013550_2654_3550 276
100 3300035691 Ga0373931_0022968 Ga0373931_0022968_1020_1907 276
101 3300035692 Ga0373935_0172381 Ga0373935_0172381_360_1271 276
102 3300035692 Ga0373935_0271241 Ga0373935_0271241_57_995 276
103 3300037068 Ga0373925_0296131 Ga0373925_0296131_109_1053 276
104 3300037068 Ga0373925_0473169 Ga0373925_0473169_43_996 276
105 3300037853 Ga0436364_0301688 Ga0436364_0301688_748_1728 276
106 3300039438 Ga0436360_1175317 Ga0436360_1175317_271_1269 276
107 3300039450 Ga0436363_0174826 Ga0436363_0174826_1515_2462 276
108 3300046473 Ga0495582_0070636 Ga0495582_0070636_73_960 276
109 3300046477 Ga0495664_0089752 Ga0495664_0089752_228_1202 276
110 3300046533 Ga0495640_0051747 Ga0495640_0051747_819_1793 276
111 3300046533 Ga0495640_0145791 Ga0495640_0145791_76_963 276
112 3300046533 Ga0495640_0150181 Ga0495640_0150181_507_1451 276
113 3300046535 Ga0495586_0014709 Ga0495586_0014709_2347_3264 276
114 3300046690 Ga0495624_0114224 Ga0495624_0114224_336_1253 276
115 3300047319 Ga0495674_0059391 Ga0495674_0059391_2329_3225 276
116 3300047319 Ga0495674_0309622 Ga0495674_0309622_187_1179 276
117 3300047319 Ga0495674_0389981 Ga0495674_0389981_68_955 276
118 3300048903 Ga0496100_0048222 Ga0496100_0048222_997_1953 276
119 3300048913 Ga0496110_0101311 Ga0496110_0101311_457_1413 276
120 3300050509 nmdc:mga0qj67_246035_c1 nmdc:mga0qj67_246035_c1_37_990 276
121 3300050511 nmdc:mga08y16_229727_c1 nmdc:mga08y16_229727_c1_918_1829 276
122 3300050511 nmdc:mga08y16_287247_c1 nmdc:mga08y16_287247_c1_624_1526 276
123 3300006237 Ga0097621_100110942 Ga0097621_1001109422 277
124 3300010159 Ga0099796_10027052 Ga0099796_100270521 277
125 3300035725 Ga0373947_0056137 Ga0373947_0056137_47_1030 277
126 3300036401 Ga0373937_0093633 Ga0373937_0093633_1333_2301 277
127 3300037853 Ga0436364_0482555 Ga0436364_0482555_221_1234 277
128 3300037853 Ga0436364_1161830 Ga0436364_1161830_736_1716 277
129 3300039450 Ga0436363_0577553 Ga0436363_0577553_143_1144 277
130 3300046690 Ga0495624_0174731 Ga0495624_0174731_263_1246 277
131 3300048908 Ga0496105_0242012 Ga0496105_0242012_107_1072 277
132 3300009177 Ga0105248_10462824 Ga0105248_104628242 278
133 3300035691 Ga0373931_0087093 Ga0373931_0087093_350_1237 278
134 3300005340 Ga0070689_100040978 Ga0070689_1000409783 280
135 3300005365 Ga0070688_100164823 Ga0070688_1001648232 280
136 3300005456 Ga0070678_100066433 Ga0070678_1000664332 280
137 3300005458 Ga0070681_10150281 Ga0070681_101502812 280
138 3300005530 Ga0070679_100086332 Ga0070679_1000863324 280
139 3300025921 Ga0207652_10112176 Ga0207652_101121762 280
140 3300025926 Ga0207659_10349881 Ga0207659_103498811 280
141 3300025936 Ga0207670_10210159 Ga0207670_102101592 280
142 3300035691 Ga0373931_0014265 Ga0373931_0014265_1938_2831 280
143 3300036401 Ga0373937_0538618 Ga0373937_0538618_24_941 285
144 3300047319 Ga0495674_0058569 Ga0495674_0058569_460_1368 285
145 3300005331 Ga0070670_100248961 Ga0070670_1002489611 286
146 3300005437 Ga0070710_10172976 Ga0070710_101729762 286
147 3300005456 Ga0070678_100386695 Ga0070678_1003866952 286
148 3300007788 Ga0099795_10081943 Ga0099795_100819431 286
149 3300011119 Ga0105246_10186269 Ga0105246_101862692 286
150 3300028556 Ga0265337_1000425 Ga0265337_10004257 286
151 3300028573 Ga0265334_10000790 Ga0265334_1000079012 286
152 3300028800 Ga0265338_10012325 Ga0265338_100123253 286
153 3300035118 Ga0373954_0158271 Ga0373954_0158271_187_1092 286
154 3300035724 Ga0373933_0071923 Ga0373933_0071923_172_1077 286
155 3300036401 Ga0373937_0009230 Ga0373937_0009230_1509_2414 286
156 3300036401 Ga0373937_0010202 Ga0373937_0010202_1351_2256 286
157 3300036401 Ga0373937_0072899 Ga0373937_0072899_1608_2498 286
158 3300036401 Ga0373937_0331085 Ga0373937_0331085_460_1359 286
159 3300046472 Ga0495580_0322576 Ga0495580_0322576_30_962 286
160 3300046531 Ga0495665_0016915 Ga0495665_0016915_2033_2944 286

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ppt-assembly1.cif.gz_A rep1-nxsq fatty acid transporter 0.6998 104 244
6e5l-assembly1.cif.gz_A crystal structure of human cellular retinol binding protein 1 in complex with abnormal-cannabidiol (abn-cbd) 0.6627 104 244
1wzn-assembly1.cif.gz_A crystal structure of the sam-dependent methyltransferase from pyrococcus horikoshii ot3 0.6622 175 245
5bvs-assembly2.cif.gz_B linoleate-bound pfabp4 0.6613 104 244
5n4q-assembly1.cif.gz_A human myelin protein p2, mutant t51p 0.6441 104 244
ID Description Score Start End Superfamily
4oqeB02 Mainly Beta;Single Sheet;S-adenosyl-L-methionine-dependent methyltransferases;CAC2371-like domains 0.7636 176 244 2.20.130.10
3pp6A00 Mainly Beta;Beta Barrel;Lipocalin;Calycin beta-barrel core domain 0.6207 104 244 2.40.128.20
af_A0A0R4IRM6_1_128_2.40.128.20 Mainly Beta;Beta Barrel;Lipocalin;Calycin beta-barrel core domain 0.5858 104 244 2.40.128.20
4lktA00 Mainly Beta;Beta Barrel;Lipocalin;Calycin beta-barrel core domain 0.5849 104 242 2.40.128.20
af_O01814_1_136_2.40.128.20 Mainly Beta;Beta Barrel;Lipocalin;Calycin beta-barrel core domain 0.5836 104 244 2.40.128.20
ID Description Score Start End GO Terms
AF-A0A2V8I653-F1-model_v4 Uncharacterized protein 0.9118 105 245
AF-A0A3D0MC71-F1-model_v4 Uncharacterized protein 0.9048 105 162
AF-A0A2V8JU23-F1-model_v4 Uncharacterized protein 0.9013 105 248
AF-X2LBH7-F1-model_v4 Uncharacterized protein 0.8984 1 286
AF-A0A2V8MPA9-F1-model_v4 Uncharacterized protein 0.8939 104 245

Feature Viewer

pLDDT pTM Quality
85.79 0.84 High
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Predicted Structure (AlphaFold2)

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