F233732

General Info

Members Datasets Scaffolds Average Seq Length
160 101 320 265

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100053973|Ga0070683_1000539734
Length 302
Sequence MDCRPSPGANRRRVRYRLQTAPHLLIGASLAETCYHKASPLTGTIPNILARIVAKKREELDQVARSLDTWERAAELRIGDRRDFRAALAVRTPAIIAEVKKASPSKGILSHDFDPARIASQYERGGASALSVLTDESFFQGSLADLESARSAVTIPAIRKDFTIAPAHIVQAAAHGADAILLIAAILTEREIRDFREMAARYRMAALVEVHERRELDIAIAAGADMIGVNNRNLNTFEVTLQTSLALAEHMPATALLVSESGIHNAADIATLRAAGYSAFLVGEHLMKSGDPAAALRDLVAA

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
65 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
83 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
88 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
89 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
90 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
95 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
96 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.12
Rhizosphere 95
Stem 0
Stem Tuber 0
Unclassified 15.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100053973 3300005329 Bacteria 3725
2 Ga0065707_10125309 3300005295 Bacteria 2026
3 Ga0070658_10001145 3300005327 Bacteria 22609
4 Ga0070680_100000520 3300005336 Bacteria 26276
5 Ga0070680_100247468 3300005336 Bacteria 1507
6 Ga0070675_100180229 3300005354 Unclassified 1826
7 Ga0070671_100338102 3300005355 Bacteria 1284
8 Ga0070673_100170819 3300005364 Bacteria 1856
9 Ga0070659_100371042 3300005366 Unclassified 1204
10 Ga0070713_100065290 3300005436 Bacteria 3057
11 Ga0070701_10218088 3300005438 Unclassified 1136
12 Ga0070681_10033345 3300005458 Bacteria 5169
13 Ga0068867_100217927 3300005459 Bacteria 1536
14 Ga0070685_10272772 3300005466 Unclassified 1129
15 Ga0070706_100296696 3300005467 Bacteria 1508
16 Ga0070684_100091905 3300005535 Bacteria 2700
17 Ga0068853_100153781 3300005539 Bacteria 2072
18 Ga0068853_100754271 3300005539 Unclassified 930
19 Ga0070686_100156674 3300005544 Bacteria 1600
20 Ga0070665_100188858 3300005548 Bacteria 2061
21 Ga0070704_100303448 3300005549 Unclassified 1331
22 Ga0068855_100003670 3300005563 Bacteria 18771
23 Ga0068855_100025632 3300005563 Bacteria 7053
24 Ga0068855_100115970 3300005563 Bacteria 3070
25 Ga0068856_100723687 3300005614 Bacteria 1015
26 Ga0070702_100425974 3300005615 Unclassified 956
27 Ga0068852_100100254 3300005616 Bacteria 2612
28 Ga0068852_100648263 3300005616 Bacteria 1063
29 Ga0068851_10092506 3300005834 Bacteria 1594
30 Ga0068863_100895985 3300005841 Bacteria 887
31 Ga0068860_100352912 3300005843 Bacteria 1448
32 Ga0068860_100365452 3300005843 Bacteria 1422
33 Ga0070717_10062066 3300006028 Bacteria 3099
34 Ga0070717_10275817 3300006028 Bacteria 1490
35 Ga0070717_10364753 3300006028 Bacteria 1293
36 Ga0097621_100026163 3300006237 Bacteria 4574
37 Ga0097621_100146945 3300006237 Bacteria 2019
38 Ga0097621_100442211 3300006237 Bacteria 1170
39 Ga0075434_100407695 3300006871 Bacteria 1380
40 Ga0075434_100442633 3300006871 Bacteria 1321
41 Ga0075436_100016041 3300006914 Bacteria 5129
42 Ga0105240_10002573 3300009093 Bacteria 29074
43 Ga0105240_10004572 3300009093 Bacteria 20981
44 Ga0105240_10060128 3300009093 Bacteria 4738
45 Ga0105240_10186992 3300009093 Bacteria 2439
46 Ga0105240_10377695 3300009093 Unclassified 1601
47 Ga0105240_10643690 3300009093 Bacteria 1163
48 Ga0111539_10005820 3300009094 Bacteria 15939
49 Ga0105241_10257806 3300009174 Unclassified 1481
50 Ga0105242_10064505 3300009176 Bacteria 3020
51 Ga0105242_10066875 3300009176 Bacteria 2969
52 Ga0105248_10078071 3300009177 Bacteria 3723
53 Ga0105248_10120636 3300009177 Bacteria 2958
54 Ga0105248_10310308 3300009177 Bacteria 1776
55 Ga0105237_10150975 3300009545 Bacteria 2320
56 Ga0105238_10040612 3300009551 Bacteria 4713
57 Ga0105238_10333736 3300009551 Unclassified 1503
58 Ga0105238_10692530 3300009551 Unclassified 1031
59 Ga0099796_10063118 3300010159 Bacteria 1318
60 Ga0105239_10144325 3300010375 Bacteria 2654
61 Ga0105239_10226723 3300010375 Bacteria 2096
62 Ga0105239_10349135 3300010375 Bacteria 1670
63 Ga0157370_10000944 3300013104 Bacteria 36878
64 Ga0157369_10000788 3300013105 Bacteria 40686
65 Ga0163162_10346138 3300013306 Bacteria 1619
66 Ga0163162_10955803 3300013306 Bacteria 968
67 Ga0157372_10081911 3300013307 Bacteria 3653
68 Ga0157372_10193656 3300013307 Bacteria 2355
69 Ga0157372_10331630 3300013307 Bacteria 1772
70 Ga0157375_10295238 3300013308 Bacteria 1784
71 Ga0213876_10070044 3300021384 Bacteria 1853
72 Ga0207645_10318661 3300025907 Unclassified 1037
73 Ga0207705_10001298 3300025909 Bacteria 20062
74 Ga0207684_10260980 3300025910 Bacteria 1495
75 Ga0207707_10016050 3300025912 Bacteria 6530
76 Ga0207695_10003231 3300025913 Bacteria 23190
77 Ga0207695_10005920 3300025913 Bacteria 16026
78 Ga0207695_10113296 3300025913 Bacteria 2688
79 Ga0207671_10108169 3300025914 Unclassified 2113
80 Ga0207657_10551566 3300025919 Bacteria 901
81 Ga0207694_10051343 3300025924 Bacteria 3196
82 Ga0207700_10040476 3300025928 Bacteria 3402
83 Ga0207664_10109339 3300025929 Bacteria 2297
84 Ga0207686_10035378 3300025934 Bacteria 2997
85 Ga0207711_10085932 3300025941 Bacteria 2757
86 Ga0207661_10037415 3300025944 Bacteria 3795
87 Ga0207667_10020550 3300025949 Bacteria 7338
88 Ga0207667_10021819 3300025949 Bacteria 7087
89 Ga0207667_10175352 3300025949 Bacteria 2203
90 Ga0207677_10157946 3300026023 Bacteria 1758
91 Ga0207639_10271904 3300026041 Bacteria 1487
92 Ga0207698_10054427 3300026142 Unclassified 3079
93 Ga0207698_10258745 3300026142 Unclassified 1598
94 Ga0268264_10274553 3300028381 Bacteria 1576
95 Ga0265323_10000947 3300028653 Bacteria 15239
96 Ga0265330_10072160 3300031235 Bacteria 1493
97 Ga0265325_10072897 3300031241 Unclassified 1720
98 Ga0265316_10013302 3300031344 Bacteria 7316
99 Ga0265316_10034778 3300031344 Bacteria 4091
100 Ga0265316_10042213 3300031344 Bacteria 3646
101 Ga0265316_10062794 3300031344 Bacteria 2882
102 Ga0265316_10335503 3300031344 Bacteria 1096
103 Ga0265314_10006229 3300031711 Bacteria 10593
104 Ga0265314_10277171 3300031711 Unclassified 950
105 Ga0265342_10032349 3300031712 Bacteria 3226
106 Ga0265342_10077062 3300031712 Bacteria 1932
107 Ga0373927_0003780 3300035695 Bacteria 10741
108 Ga0373927_0117420 3300035695 Bacteria 1735
109 Ga0373927_0170780 3300035695 Bacteria 1425
110 Ga0373937_0175290 3300036401 Bacteria 2013
111 Ga0373937_0263750 3300036401 Bacteria 1625
112 Ga0373937_0962487 3300036401 Bacteria 802
113 Ga0316584_0391903 3300036712 Bacteria 991
114 Ga0373925_0058006 3300037068 Bacteria 2902
115 Ga0436364_0000960 3300037853 Bacteria 1645
116 Ga0436364_1052798 3300037853 Bacteria 5465
117 Ga0451577_0332917 3300042876 Bacteria 1377
118 Ga0466959_0136479 3300045049 Bacteria 1736
119 Ga0451576_0019930 3300045051 Bacteria 7311
120 Ga0451576_0481842 3300045051 Bacteria 1303
121 Ga0495592_0177347 3300046454 Bacteria 1454
122 Ga0495580_0000159 3300046472 Bacteria 49542
123 Ga0495580_0030681 3300046472 Bacteria 3890
124 Ga0495580_0075524 3300046472 Bacteria 2351
125 Ga0495580_0162394 3300046472 Unclassified 1546
126 Ga0495666_0051506 3300046526 Bacteria 1978
127 Ga0495652_0053649 3300046529 Bacteria 3435
128 Ga0495665_0029867 3300046531 Bacteria 2919
129 Ga0495665_0218668 3300046531 Bacteria 985
130 Ga0495640_0168470 3300046533 Unclassified 1400
131 Ga0495587_0038091 3300046536 Unclassified 2884
132 Ga0495645_0013953 3300046543 Bacteria 5694
133 Ga0495645_0022283 3300046543 Bacteria 4582
134 Ga0495645_0030545 3300046543 Unclassified 3924
135 Ga0495667_0170307 3300046559 Unclassified 1399
136 Ga0495599_0055032 3300046678 Bacteria 2492
137 Ga0495599_0257934 3300046678 Bacteria 1060
138 Ga0495623_0003756 3300046679 Bacteria 10014
139 Ga0495623_0071591 3300046679 Bacteria 2157
140 Ga0495623_0080462 3300046679 Bacteria 2017
141 Ga0495600_0032965 3300046809 Bacteria 3362
142 Ga0495600_0220536 3300046809 Unclassified 1213
143 Ga0495581_0103226 3300047315 Bacteria 1657
144 Ga0495604_0043856 3300047317 Bacteria 3498
145 Ga0495604_0056351 3300047317 Bacteria 3026
146 Ga0495604_0063133 3300047317 Unclassified 2826
147 Ga0495675_0173629 3300047444 Unclassified 1323
148 Ga0495684_0000741 3300047471 Bacteria 26335
149 Ga0495684_0079801 3300047471 Bacteria 2484
150 Ga0495602_0119942 3300048088 Bacteria 2118
151 Ga0495602_0238505 3300048088 Bacteria 1362
152 Ga0495602_0247382 3300048088 Bacteria 1331
153 Ga0496103_0112078 3300048906 Bacteria 1733
154 Ga0496106_0151673 3300048909 Bacteria 1829
155 Ga0496106_0250318 3300048909 Bacteria 1416
156 Ga0496107_0019968 3300048910 Bacteria 4731
157 Ga0496112_0289315 3300048915 Bacteria 1585
158 Ga0501046_0173093 3300049580 Bacteria 1619
159 nmdc:mga08x19_783_c1 3300050514 Bacteria 20265
160 Ga0530510_0021052 3300061734 Bacteria 4639
161 Ga0070683_100053973
162 Ga0065707_10125309
163 Ga0070658_10001145
164 Ga0070680_100000520
165 Ga0070680_100247468
166 Ga0070675_100180229
167 Ga0070671_100338102
168 Ga0070673_100170819
169 Ga0070659_100371042
170 Ga0070713_100065290
171 Ga0070701_10218088
172 Ga0070681_10033345
173 Ga0068867_100217927
174 Ga0070685_10272772
175 Ga0070706_100296696
176 Ga0070684_100091905
177 Ga0068853_100153781
178 Ga0068853_100754271
179 Ga0070686_100156674
180 Ga0070665_100188858
181 Ga0070704_100303448
182 Ga0068855_100003670
183 Ga0068855_100025632
184 Ga0068855_100115970
185 Ga0068856_100723687
186 Ga0070702_100425974
187 Ga0068852_100100254
188 Ga0068852_100648263
189 Ga0068851_10092506
190 Ga0068863_100895985
191 Ga0068860_100352912
192 Ga0068860_100365452
193 Ga0070717_10062066
194 Ga0070717_10275817
195 Ga0070717_10364753
196 Ga0097621_100026163
197 Ga0097621_100146945
198 Ga0097621_100442211
199 Ga0075434_100407695
200 Ga0075434_100442633
201 Ga0075436_100016041
202 Ga0105240_10002573
203 Ga0105240_10004572
204 Ga0105240_10060128
205 Ga0105240_10186992
206 Ga0105240_10377695
207 Ga0105240_10643690
208 Ga0111539_10005820
209 Ga0105241_10257806
210 Ga0105242_10064505
211 Ga0105242_10066875
212 Ga0105248_10078071
213 Ga0105248_10120636
214 Ga0105248_10310308
215 Ga0105237_10150975
216 Ga0105238_10040612
217 Ga0105238_10333736
218 Ga0105238_10692530
219 Ga0099796_10063118
220 Ga0105239_10144325
221 Ga0105239_10226723
222 Ga0105239_10349135
223 Ga0157370_10000944
224 Ga0157369_10000788
225 Ga0163162_10346138
226 Ga0163162_10955803
227 Ga0157372_10081911
228 Ga0157372_10193656
229 Ga0157372_10331630
230 Ga0157375_10295238
231 Ga0213876_10070044
232 Ga0207645_10318661
233 Ga0207705_10001298
234 Ga0207684_10260980
235 Ga0207707_10016050
236 Ga0207695_10003231
237 Ga0207695_10005920
238 Ga0207695_10113296
239 Ga0207671_10108169
240 Ga0207657_10551566
241 Ga0207694_10051343
242 Ga0207700_10040476
243 Ga0207664_10109339
244 Ga0207686_10035378
245 Ga0207711_10085932
246 Ga0207661_10037415
247 Ga0207667_10020550
248 Ga0207667_10021819
249 Ga0207667_10175352
250 Ga0207677_10157946
251 Ga0207639_10271904
252 Ga0207698_10054427
253 Ga0207698_10258745
254 Ga0268264_10274553
255 Ga0265323_10000947
256 Ga0265330_10072160
257 Ga0265325_10072897
258 Ga0265316_10013302
259 Ga0265316_10034778
260 Ga0265316_10042213
261 Ga0265316_10062794
262 Ga0265316_10335503
263 Ga0265314_10006229
264 Ga0265314_10277171
265 Ga0265342_10032349
266 Ga0265342_10077062
267 Ga0373927_0003780
268 Ga0373927_0117420
269 Ga0373927_0170780
270 Ga0373937_0175290
271 Ga0373937_0263750
272 Ga0373937_0962487
273 Ga0316584_0391903
274 Ga0373925_0058006
275 Ga0436364_0000960
276 Ga0436364_1052798
277 Ga0451577_0332917
278 Ga0466959_0136479
279 Ga0451576_0019930
280 Ga0451576_0481842
281 Ga0495592_0177347
282 Ga0495580_0000159
283 Ga0495580_0030681
284 Ga0495580_0075524
285 Ga0495580_0162394
286 Ga0495666_0051506
287 Ga0495652_0053649
288 Ga0495665_0029867
289 Ga0495665_0218668
290 Ga0495640_0168470
291 Ga0495587_0038091
292 Ga0495645_0013953
293 Ga0495645_0022283
294 Ga0495645_0030545
295 Ga0495667_0170307
296 Ga0495599_0055032
297 Ga0495599_0257934
298 Ga0495623_0003756
299 Ga0495623_0071591
300 Ga0495623_0080462
301 Ga0495600_0032965
302 Ga0495600_0220536
303 Ga0495581_0103226
304 Ga0495604_0043856
305 Ga0495604_0056351
306 Ga0495604_0063133
307 Ga0495675_0173629
308 Ga0495684_0000741
309 Ga0495684_0079801
310 Ga0495602_0119942
311 Ga0495602_0238505
312 Ga0495602_0247382
313 Ga0496103_0112078
314 Ga0496106_0151673
315 Ga0496106_0250318
316 Ga0496107_0019968
317 Ga0496112_0289315
318 Ga0501046_0173093
319 nmdc:mga08x19_783_c1
320 Ga0530510_0021052

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00218

IGPS

Indole-3-glycerol phosphate synthase

49

299

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6y88-assembly8.cif.gz_H igps (indole-3-glycerol phosphate synthase) from pseudomonas aeruginosa in complex with substrate inhibitor rcdrp 0.9587 7 256
6y88-assembly7.cif.gz_G igps (indole-3-glycerol phosphate synthase) from pseudomonas aeruginosa in complex with substrate inhibitor rcdrp 0.955 23 255
5k7j-assembly1.cif.gz_A structure of designed zinc binding protein ze2 bound to zn2+ 0.9378 34 256
1i4n-assembly2.cif.gz_B crystal structure of indoleglycerol phosphate synthase from thermotoga maritima 0.9328 10 254
3t40-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis indole glycerol phosphate synthase (igps) complex with n-2-carboxyphenyl glycine (cpg) 0.9308 7 260
ID Description Score Start End Superfamily
af_P00937_209_484_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9554 4 256 3.20.20.70
af_B4FS35_106_381_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9366 7 256 3.20.20.70
1i4nB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9328 10 254 3.20.20.70
3t40A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9308 7 260 3.20.20.70
3tsmB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9277 9 254 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A1Q7GY99-F1-model_v4 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) 0.9944 51 255 GO:0000162
GO:0004425
GO:0004640
GO:0006568
AF-A0A143PRP9-F1-model_v4 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) 0.9941 39 256 GO:0000162
GO:0004425
GO:0004640
GO:0006568
AF-A0A2E4M2X7-F1-model_v4 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) 0.9908 51 256 GO:0000162
GO:0004425
GO:0004640
GO:0006568
AF-A1VYK3-F1-model_v4 Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48) 0.99 48 254 GO:0000162
GO:0004425
GO:0004640
GO:0006568
AF-A0A382JET2-F1-model_v4 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) 0.9899 55 257 GO:0000162
GO:0004425
GO:0004640

Map