F233371

General Info

Members Datasets Scaffolds Average Seq Length
159 120 318 394

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935409751|2935410482
Length 443
Sequence TLLDAGGARRAVDLAEAPTFAKPRHPLTSRVAYAAAHVVPKAHADNTPGQPAEIDWDATLAFRHHVWSWGLGVADAMDTAQRNMGLDAAATRELISRSAAEAASVGGRLVVGVNTDHVDDEQISLDQVIDAYKEQLHRTEDAGAGVVLMASRHLARAAQNADDYRRVYREVLAAAGGPVVLHWLGTAFDPSLAGYFGSDDTDAAAETLLQIIGYNGDKVQGVKMSLLDADAEIAVRRRLPESARMFTGDDFHYVGLIEGDEQGHSDALLGAFSCLAPNASAAIQALDRGDVAGYREILAPTEPLSQQVFAAPTYYYKTGVAFLSWLNGHQAAFQMVGGLHAARSLPHLSRIVELANASGALERPELAAARWHSLLTLNGVDVTAVTTTDAAGETDAAAETDAAAGAIAPAAPAGHAAHAAPATEDSASADAVDAASVDEEVHA

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
8 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
9 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
10 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
11 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
12 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
13 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
14 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
15 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
16 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
17 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
18 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
19 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
22 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
27 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
28 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
29 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
30 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
31 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
32 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
33 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
34 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
35 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
36 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
37 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
38 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
39 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
40 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
41 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
42 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
43 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
44 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
45 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
46 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
47 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
48 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
49 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
50 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
51 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
52 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
53 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
54 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
55 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
56 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
57 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
58 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
59 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
60 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
61 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
62 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
63 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
64 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
78 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
79 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
80 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
82 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
83 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
84 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
85 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
86 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
87 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
88 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
89 2643221549 Agromyces sp. Root1464 Isolate Unclassified
90 2643221616 Leifsonia sp. Root227 Isolate Unclassified
91 2643221619 Agromyces sp. Root81 Isolate Unclassified
92 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
93 2643221692 Nocardia sp. Root136 Isolate Unclassified
94 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
95 2751185800 Brucella pituitosa AA2 Isolate Unclassified
96 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
97 2773857759 Microbacterium sp. 1294 Isolate Unclassified
98 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
99 2808606372 Agromyces sp. 23-23 Isolate Unclassified
100 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
101 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
102 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
103 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
104 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
105 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
106 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
107 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
108 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
109 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
110 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
111 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
112 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
113 2928153084 Leifsonia sp. 563 Isolate Unclassified
114 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
115 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
116 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
117 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
118 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
119 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
120 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.84
Metatranscriptomes 3.14
Isolates 22.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.77
Nodule 0
Rhizoplane 12.58
Rhizosphere 54.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10005093 3300001979 Bacteria 5581
2 Ga0006562J51391_1126961 3300003578 Bacteria 2757
3 Ga0006562J51391_1126962 3300003578 Bacteria 2760
4 Ga0070658_10043068 3300005327 Bacteria 3647
5 Ga0070682_100074163 3300005337 Bacteria 2185
6 Ga0070678_100097894 3300005456 Bacteria 2267
7 Ga0068855_100014006 3300005563 Bacteria 9668
8 Ga0081540_1008149 3300005983 Bacteria 7350
9 Ga0105240_10119268 3300009093 Bacteria 3178
10 Ga0105245_10396017 3300009098 Bacteria 1379
11 Ga0157369_10039398 3300013105 Bacteria 5164
12 Ga0171463_1004 3300013249 Bacteria 437207
13 Ga0157372_10267711 3300013307 Bacteria 1985
14 Ga0157380_10013865 3300014326 Bacteria 5887
15 Ga0182005_1000033 3300015265 Bacteria 184761
16 Ga0183363_1222 3300015690 Bacteria 10730
17 Ga0206356_10110270 3300020070 Bacteria 1771
18 Ga0206354_10230446 3300020081 Bacteria 7117
19 Ga0206353_10764648 3300020082 Bacteria 4838
20 Ga0209563_101225 3300025230 Bacteria 7144
21 Ga0209677_100764 3300025253 Bacteria 16304
22 Ga0207426_1008683 3300025302 Bacteria 4077
23 Ga0207647_10045938 3300025904 Bacteria 2723
24 Ga0207695_10115806 3300025913 Bacteria 2654
25 Ga0207667_10031491 3300025949 Bacteria 5725
26 Ga0207683_10177981 3300026121 Bacteria 1928
27 Ga0265319_1014966 3300028563 Bacteria 3024
28 Ga0307405_10141887 3300031731 Bacteria 1677
29 Ga0307406_10000095 3300031901 Bacteria 50122
30 Ga0307406_10094048 3300031901 Bacteria 2025
31 Ga0307407_10052389 3300031903 Bacteria 2344
32 Ga0395899_0002933 3300037312 Bacteria 13691
33 Ga0395898_0058536 3300037466 Bacteria 3751
34 Ga0439465_0013905 3300041413 Bacteria 2506
35 Ga0466972_0013787 3300044658 Bacteria 4057
36 Ga0466972_0059911 3300044658 Bacteria 1827
37 Ga0466965_0004768 3300044683 Bacteria 6046
38 Ga0466965_0069615 3300044683 Bacteria 1768
39 Ga0466961_0020276 3300044693 Bacteria 4277
40 Ga0466959_0023035 3300045049 Bacteria 4606
41 Ga0495629_0065143 3300046459 Bacteria 2544
42 Ga0495662_0039731 3300046476 Bacteria 2273
43 Ga0495608_0049399 3300046511 Bacteria 2793
44 Ga0495600_0179585 3300046809 Bacteria 1364
45 Ga0495674_0233725 3300047319 Bacteria 1517
46 Ga0496100_0009923 3300048903 Bacteria 5370
47 Ga0496101_0001069 3300048904 Bacteria 16209
48 Ga0496102_0042298 3300048905 Bacteria 4129
49 Ga0496102_0204127 3300048905 Bacteria 1863
50 Ga0496104_0000304 3300048907 Bacteria 43780
51 Ga0496105_0005361 3300048908 Bacteria 9722
52 Ga0496105_0057548 3300048908 Bacteria 3210
53 Ga0496105_0175174 3300048908 Bacteria 1757
54 Ga0496106_0003806 3300048909 Bacteria 11241
55 Ga0496107_0002712 3300048910 Bacteria 11610
56 Ga0496108_0003436 3300048911 Bacteria 12700
57 Ga0496109_0013906 3300048912 Bacteria 6997
58 Ga0496110_0013175 3300048913 Bacteria 6827
59 Ga0496111_0001068 3300048914 Bacteria 15097
60 Ga0496114_0007675 3300048917 Bacteria 8530
61 Ga0496114_0012637 3300048917 Bacteria 6763
62 Ga0496114_0029423 3300048917 Bacteria 4515
63 Ga0496114_0070662 3300048917 Bacteria 2933
64 Ga0496114_0216811 3300048917 Bacteria 1679
65 Ga0496114_0294433 3300048917 Bacteria 1432
66 Ga0496116_0018778 3300048919 Bacteria 5313
67 Ga0496117_0004262 3300048920 Bacteria 15955
68 Ga0496117_0008359 3300048920 Bacteria 9842
69 Ga0496117_0131235 3300048920 Bacteria 1518
70 Ga0496118_0006040 3300048921 Bacteria 13486
71 Ga0496118_0007212 3300048921 Bacteria 11871
72 Ga0496119_0005423 3300048922 Bacteria 12233
73 Ga0496119_0018612 3300048922 Bacteria 5160
74 Ga0496120_0000326 3300048923 Bacteria 79061
75 Ga0496122_0000443 3300048925 Bacteria 86652
76 Ga0496122_0002145 3300048925 Bacteria 28996
77 Ga0496123_0000003 3300048926 Bacteria 866556
78 Ga0496123_0002851 3300048926 Bacteria 20410
79 Ga0496123_0054501 3300048926 Bacteria 2632
80 Ga0496124_0015269 3300048927 Bacteria 7369
81 Ga0496124_0021773 3300048927 Bacteria 5898
82 Ga0496125_0012036 3300048928 Bacteria 8612
83 Ga0496125_0057450 3300048928 Bacteria 3151
84 Ga0496125_0097423 3300048928 Bacteria 2179
85 Ga0496125_0133945 3300048928 Bacteria 1737
86 Ga0496126_0010404 3300048929 Bacteria 9755
87 Ga0496126_0055116 3300048929 Bacteria 3598
88 Ga0496126_0098865 3300048929 Bacteria 2556
89 Ga0496126_0144865 3300048929 Bacteria 2041
90 Ga0501032_0012340 3300049569 Bacteria 6108
91 Ga0501033_0018586 3300049570 Bacteria 5253
92 Ga0501033_0019141 3300049570 Bacteria 5176
93 Ga0501034_0037341 3300049571 Bacteria 4918
94 Ga0501034_0047541 3300049571 Bacteria 4332
95 Ga0501034_0061258 3300049571 Bacteria 3779
96 Ga0501034_0147186 3300049571 Bacteria 2332
97 Ga0501036_0014661 3300049572 Bacteria 6531
98 Ga0501037_0126730 3300049573 Bacteria 1832
99 Ga0501038_0094915 3300049574 Bacteria 2492
100 Ga0501039_0097786 3300049575 Bacteria 2289
101 Ga0501040_0373151 3300049576 Bacteria 1023
102 Ga0501042_0001044 3300049578 Bacteria 15794
103 Ga0501043_0106653 3300049579 Bacteria 2200
104 Ga0501046_0009451 3300049580 Bacteria 8427
105 Ga0501046_0011979 3300049580 Bacteria 7398
106 Ga0501046_0026717 3300049580 Bacteria 4714
107 Ga0501047_0013174 3300049581 Bacteria 7831
108 Ga0501047_0035662 3300049581 Bacteria 4805
109 Ga0501047_0037639 3300049581 Bacteria 4678
110 Ga0501047_0164920 3300049581 Bacteria 2086
111 Ga0501048_0033270 3300049582 Bacteria 3725
112 Ga0501070_0000470 3300049586 Bacteria 36645
113 Ga0501070_0002051 3300049586 Bacteria 17708
114 Ga0501073_0018443 3300049589 Bacteria 5044
115 Ga0501083_0000162 3300049744 Bacteria 43696
116 Ga0501035_0006877 3300049822 Bacteria 10625
117 Ga0501044_0017584 3300049823 Bacteria 7669
118 Ga0501044_0032217 3300049823 Bacteria 5511
119 Ga0501044_0083220 3300049823 Bacteria 3236
120 Ga0501044_0321320 3300049823 Bacteria 1472
121 Ga0500635_0000078 3300053080 Bacteria 63528
122 Ga0500573_0031520 3300053140 Bacteria 3059
123 Ga0500616_0023580 3300053153 Bacteria 3427
124 Ga0501084_0098900 3300054114 Bacteria 2450
125 2935410482 2935409751 Bacteria 4179611
126 2511392197 2511231027 Bacteria 5013807
127 2623590257 2622736626 Bacteria 7181580
128 2643766199 2643221549 Bacteria 4042819
129 2644097633 2643221616 Bacteria 4066575
130 2644110544 2643221619 Bacteria 4158469
131 2644178915 2643221631 Bacteria 8168043
132 2644516402 2643221692 Bacteria 7282860
133 2723641055 2721755702 Bacteria 4373124
134 2753360479 2751185800 Bacteria 5467370
135 2758642918 2758568016 Bacteria 5645291
136 2774382140 2773857759 Bacteria 2963774
137 2808883841 2808606368 Bacteria 3174172
138 2808903215 2808606372 Bacteria 4649509
139 2812324764 2811994872 Bacteria 4121241
140 2835191811 2835188231 Bacteria 3476928
141 2839986538 2839986021 Bacteria 3685650
142 2840766635 2840764183 Bacteria 6358399
143 2842875113 2842871566 Bacteria 4827117
144 2844845197 2844841374 Bacteria 3917147
145 2857722499 2857720070 Bacteria 3189373
146 2857732067 2857729791 Bacteria 4040535
147 2870625218 2870622029 Bacteria 3643329
148 2895662618 2895660088 Bacteria 3782833
149 2915650579 2915650412 Bacteria 4288180
150 2919443776 2919443155 Bacteria 4072969
151 2919527050 2919523602 Bacteria 3788128
152 2928154745 2928153084 Bacteria 4020257
153 2928522487 2928521798 Bacteria 4960112
154 2939659972 2939657138 Bacteria 3740283
155 2954014118 2954011201 Bacteria 4762601
156 2964327866 2964326757 Bacteria 3290868
157 2977252329 2977251589 Bacteria 2952848
158 3003935493 3003930520 Bacteria 5667563
159 8046355541 8046352972 Bacteria 3613806
160 JGI24740J21852_10005093
161 Ga0006562J51391_1126961
162 Ga0006562J51391_1126962
163 Ga0070658_10043068
164 Ga0070682_100074163
165 Ga0070678_100097894
166 Ga0068855_100014006
167 Ga0081540_1008149
168 Ga0105240_10119268
169 Ga0105245_10396017
170 Ga0157369_10039398
171 Ga0171463_1004
172 Ga0157372_10267711
173 Ga0157380_10013865
174 Ga0182005_1000033
175 Ga0183363_1222
176 Ga0206356_10110270
177 Ga0206354_10230446
178 Ga0206353_10764648
179 Ga0209563_101225
180 Ga0209677_100764
181 Ga0207426_1008683
182 Ga0207647_10045938
183 Ga0207695_10115806
184 Ga0207667_10031491
185 Ga0207683_10177981
186 Ga0265319_1014966
187 Ga0307405_10141887
188 Ga0307406_10000095
189 Ga0307406_10094048
190 Ga0307407_10052389
191 Ga0395899_0002933
192 Ga0395898_0058536
193 Ga0439465_0013905
194 Ga0466972_0013787
195 Ga0466972_0059911
196 Ga0466965_0004768
197 Ga0466965_0069615
198 Ga0466961_0020276
199 Ga0466959_0023035
200 Ga0495629_0065143
201 Ga0495662_0039731
202 Ga0495608_0049399
203 Ga0495600_0179585
204 Ga0495674_0233725
205 Ga0496100_0009923
206 Ga0496101_0001069
207 Ga0496102_0042298
208 Ga0496102_0204127
209 Ga0496104_0000304
210 Ga0496105_0005361
211 Ga0496105_0057548
212 Ga0496105_0175174
213 Ga0496106_0003806
214 Ga0496107_0002712
215 Ga0496108_0003436
216 Ga0496109_0013906
217 Ga0496110_0013175
218 Ga0496111_0001068
219 Ga0496114_0007675
220 Ga0496114_0012637
221 Ga0496114_0029423
222 Ga0496114_0070662
223 Ga0496114_0216811
224 Ga0496114_0294433
225 Ga0496116_0018778
226 Ga0496117_0004262
227 Ga0496117_0008359
228 Ga0496117_0131235
229 Ga0496118_0006040
230 Ga0496118_0007212
231 Ga0496119_0005423
232 Ga0496119_0018612
233 Ga0496120_0000326
234 Ga0496122_0000443
235 Ga0496122_0002145
236 Ga0496123_0000003
237 Ga0496123_0002851
238 Ga0496123_0054501
239 Ga0496124_0015269
240 Ga0496124_0021773
241 Ga0496125_0012036
242 Ga0496125_0057450
243 Ga0496125_0097423
244 Ga0496125_0133945
245 Ga0496126_0010404
246 Ga0496126_0055116
247 Ga0496126_0098865
248 Ga0496126_0144865
249 Ga0501032_0012340
250 Ga0501033_0018586
251 Ga0501033_0019141
252 Ga0501034_0037341
253 Ga0501034_0047541
254 Ga0501034_0061258
255 Ga0501034_0147186
256 Ga0501036_0014661
257 Ga0501037_0126730
258 Ga0501038_0094915
259 Ga0501039_0097786
260 Ga0501040_0373151
261 Ga0501042_0001044
262 Ga0501043_0106653
263 Ga0501046_0009451
264 Ga0501046_0011979
265 Ga0501046_0026717
266 Ga0501047_0013174
267 Ga0501047_0035662
268 Ga0501047_0037639
269 Ga0501047_0164920
270 Ga0501048_0033270
271 Ga0501070_0000470
272 Ga0501070_0002051
273 Ga0501073_0018443
274 Ga0501083_0000162
275 Ga0501035_0006877
276 Ga0501044_0017584
277 Ga0501044_0032217
278 Ga0501044_0083220
279 Ga0501044_0321320
280 Ga0500635_0000078
281 Ga0500573_0031520
282 Ga0500616_0023580
283 Ga0501084_0098900
284 2935410482
285 2511392197
286 2623590257
287 2643766199
288 2644097633
289 2644110544
290 2644178915
291 2644516402
292 2723641055
293 2753360479
294 2758642918
295 2774382140
296 2808883841
297 2808903215
298 2812324764
299 2835191811
300 2839986538
301 2840766635
302 2842875113
303 2844845197
304 2857722499
305 2857732067
306 2870625218
307 2895662618
308 2915650579
309 2919443776
310 2919527050
311 2928154745
312 2928522487
313 2939659972
314 2954014118
315 2964327866
316 2977252329
317 3003935493
318 8046355541

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06187

DUF993

Protein of unknown function (DUF993)

1

380

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dnh-assembly1.cif.gz_A crystal structure of hypothetical protein smc04132 from sinorhizobium meliloti 1021 0.9649 12 394
4dnh-assembly1.cif.gz_A crystal structure of hypothetical protein smc04132 from sinorhizobium meliloti 1021 0.9551 12 394
4pfm-assembly1.cif.gz_B shewanella benthica dhdps with lysine and pyruvate 0.8618 42 372
4icn-assembly1.cif.gz_B dihydrodipicolinate synthase from shewanella benthica 0.8605 39 372
1dhp-assembly1.cif.gz_A dihydrodipicolinate synthase 0.8555 42 375
ID Description Score Start End Superfamily
4dnhA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9584 12 388 3.20.20.70
4dnhA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9483 12 388 3.20.20.70
af_P75682_5_302_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8321 39 374 3.20.20.70
6nvaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8286 43 375 3.20.20.70
af_P75682_5_302_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.827 39 374 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A526URZ2-F1-model_v4 Dihydrodipicolinate synthase family protein 1.002 308 375
AF-A0A4R7M1W5-F1-model_v4 Uncharacterized protein DUF993 1.001 315 394
AF-A0A436JX64-F1-model_v4 deleted 0.9996 286 394
AF-A0A2V6UMI6-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9958 293 394
AF-A0A2N4XXX9-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9958 303 394

Map