F232389

General Info

Members Datasets Scaffolds Average Seq Length
159 126 146 583

Family's Representative Sequence

Representative Sequence 3300025972|Ga0207668_10094649|Ga0207668_100946491
Length 646
Sequence VTHVPVREAEITADGFRFFPVAIVPFSSFQYAFEAEWIDKFRSASSSQDDRAYECCSNDMPRLLSVNVGLPRDIAWKGRTVHTAIWKEPVRGRCQVGRLNLDGDRQGDVAGHGGEQRAVFAYQIESYRYWQEQLKRTDFVRGQFGENFTIEGLPDDAVCIGDRYRIGSALFEVTQPRVTCYRVGIRMNEPRMPALLTSSGRPGFYCRVLQPGEVGDGDEIVKEGEATERMTVAEINALLYSPDHPRDRLERALRIEALSPGWRSSFEALLQNQTISAGNGNAGLAPAAAAHPAPPGFRPLVVTAIDRESEAILSLTMQSRDSEPLPAPLPGQFVVVRLQPIAGGPPLFRSYSLSGLPSTTSYRISVKVEAKGAAGTYLRDHVRPGDTLDISAPRGSFILQSGERPLVLLSAGIGATPVLAMLHALAAAGSTRQVFWLHGARDRQHHPFAAEVRRLMPVLLHGRSYICYSRPGADDTISDDFDATGHLSRTVFEKVGIPREADVYVCGPTRFMTEMKEALATVGIAPPQIHLELFNGSESMTPGVVSGVARAPHLPADDADTGALVSFARSGIAAHWDASSYQSILELAEACDIPVRWSCRTGVCHNCESGLVSGEVVYGPEPLERPAEGNLLVCCSQPSRDVVIDL

Samples

Sample ID Description Type Environment
1 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
2 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
3 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
4 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
5 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
6 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
7 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
8 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
9 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
10 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
11 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
12 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
68 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
69 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
70 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
71 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
81 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
82 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
85 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
86 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
87 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
88 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
89 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
90 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
95 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
100 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
101 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
102 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
103 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
115 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
116 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
120 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
125 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
126 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 91.82
Metatranscriptomes 0
Isolates 8.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.03
Nodule 1.89
Rhizoplane 6.92
Rhizosphere 72.96
Stem 0
Stem Tuber 0
Unclassified 13.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10029358 3300003322 Bacteria 15328
2 JGI25160J50197_1000043 3300003354 Bacteria 146498
3 Ga0065165_1001379 3300005262 Bacteria 26691
4 Ga0065165_1005526 3300005262 Bacteria 7061
5 Ga0065712_10079885 3300005290 Bacteria 3168
6 Ga0070683_100000936 3300005329 Bacteria 21719
7 Ga0070683_100128356 3300005329 Bacteria 2398
8 Ga0070680_100041982 3300005336 Bacteria 3710
9 Ga0070671_100002452 3300005355 Bacteria 14339
10 Ga0070674_100086959 3300005356 Bacteria 2246
11 Ga0070667_100039344 3300005367 Bacteria 3963
12 Ga0070663_100008336 3300005455 Bacteria 6368
13 Ga0070663_100076516 3300005455 Bacteria 2448
14 Ga0070706_100000280 3300005467 Bacteria 62151
15 Ga0070707_100006259 3300005468 Bacteria 11073
16 Ga0070697_100005005 3300005536 Bacteria 10177
17 Ga0070665_100052923 3300005548 Bacteria 4072
18 Ga0070665_100060206 3300005548 Bacteria 3806
19 Ga0068859_100000493 3300005617 Bacteria 38872
20 Ga0068866_10022051 3300005718 Bacteria 2943
21 Ga0068870_10002574 3300005840 Bacteria 7587
22 Ga0068858_100005786 3300005842 Bacteria 12077
23 Ga0068860_100017947 3300005843 Bacteria 6892
24 Ga0081540_1023412 3300005983 Bacteria 3612
25 Ga0068865_100030693 3300006881 Bacteria 3577
26 Ga0097620_100000493 3300006931 Bacteria 38872
27 Ga0105240_10006662 3300009093 Bacteria 16935
28 Ga0105240_10028795 3300009093 Bacteria 7247
29 Ga0105245_10015597 3300009098 Bacteria 6626
30 Ga0105247_10008387 3300009101 Bacteria 6299
31 Ga0105242_10021792 3300009176 Bacteria 5035
32 Ga0105248_10046476 3300009177 Bacteria 4865
33 Ga0105248_10091842 3300009177 Bacteria 3419
34 Ga0105248_10123484 3300009177 Bacteria 2921
35 Ga0105249_10015185 3300009553 Bacteria 6815
36 Ga0105239_10003616 3300010375 Bacteria 18900
37 Ga0157369_10068446 3300013105 Bacteria 3814
38 Ga0163162_10042081 3300013306 Bacteria 4571
39 Ga0163162_10062800 3300013306 Bacteria 3755
40 Ga0163162_10149789 3300013306 Bacteria 2450
41 Ga0157372_10080272 3300013307 Bacteria 3690
42 Ga0163163_10096370 3300014325 Bacteria 2978
43 Ga0157376_10018646 3300014969 Bacteria 5327
44 Ga0157376_10096402 3300014969 Bacteria 2574
45 Ga0209564_1003149 3300025295 Bacteria 11616
46 Ga0207426_1000014 3300025302 Bacteria 649413
47 Ga0207426_1001561 3300025302 Bacteria 18557
48 Ga0207710_10001318 3300025900 Bacteria 12528
49 Ga0207695_10051557 3300025913 Bacteria 4319
50 Ga0207652_10015210 3300025921 Bacteria 6245
51 Ga0207687_10022986 3300025927 Bacteria 4152
52 Ga0207704_10000873 3300025938 Bacteria 13320
53 Ga0207711_10009762 3300025941 Bacteria 7985
54 Ga0207711_10194695 3300025941 Bacteria 1848
55 Ga0207661_10147821 3300025944 Bacteria 2029
56 Ga0207668_10094649 3300025972 Bacteria 2203
57 Ga0207703_10015494 3300026035 Bacteria 5943
58 Ga0207678_10078460 3300026067 Bacteria 2828
59 Ga0207675_100146581 3300026118 Bacteria 2245
60 Ga0268266_10140445 3300028379 Bacteria 2167
61 Ga0268264_10005537 3300028381 Bacteria 10708
62 Ga0268264_10099513 3300028381 Bacteria 2523
63 Ga0265340_10039697 3300031247 Bacteria 2320
64 Ga0307509_10000005 3300031507 Bacteria 435959
65 Ga0307406_10087797 3300031901 Bacteria 2085
66 Ga0307412_10000059 3300031911 Bacteria 138772
67 Ga0307416_100015419 3300032002 Bacteria 5280
68 Ga0307510_10054234 3300033180 Bacteria 4203
69 Ga0373954_0014318 3300035118 Bacteria 3536
70 Ga0373956_0000859 3300035119 Bacteria 12650
71 Ga0373955_0004373 3300035172 Bacteria 6251
72 Ga0373933_0000193 3300035724 Bacteria 40441
73 Ga0373937_0000407 3300036401 Bacteria 40117
74 Ga0373937_0014268 3300036401 Bacteria 7012
75 Ga0395900_0003215 3300037418 Bacteria 17688
76 Ga0395898_0003095 3300037466 Bacteria 18827
77 Ga0395898_0206304 3300037466 Bacteria 1875
78 Ga0436361_1036049 3300039447 Bacteria 4053
79 Ga0466967_0010548 3300045976 Bacteria 6939
80 Ga0495590_0013048 3300046457 Bacteria 3063
81 Ga0495629_0000097 3300046459 Bacteria 76355
82 Ga0495638_0016465 3300046460 Bacteria 4952
83 Ga0495651_0022210 3300046462 Bacteria 4933
84 Ga0495653_0000802 3300046463 Bacteria 24114
85 Ga0495650_0015265 3300046471 Bacteria 3947
86 Ga0495580_0002191 3300046472 Bacteria 17093
87 Ga0495580_0003314 3300046472 Bacteria 13773
88 Ga0495580_0067045 3300046472 Bacteria 2511
89 Ga0495605_0002773 3300046474 Bacteria 10680
90 Ga0495583_0009741 3300046506 Bacteria 5704
91 Ga0495608_0009785 3300046511 Bacteria 6690
92 Ga0495610_0000624 3300046512 Bacteria 35024
93 Ga0495616_0047424 3300046513 Bacteria 2164
94 Ga0495630_0012484 3300046517 Bacteria 6169
95 Ga0495648_0016575 3300046524 Bacteria 5306
96 Ga0495587_0002799 3300046536 Bacteria 11659
97 Ga0495657_0032478 3300046675 Bacteria 3642
98 Ga0495613_0071962 3300046689 Bacteria 2520
99 Ga0495624_0015985 3300046690 Bacteria 5049
100 Ga0495624_0030697 3300046690 Bacteria 3498
101 Ga0495589_0017318 3300046794 Bacteria 3699
102 Ga0495600_0016128 3300046809 Bacteria 4736
103 Ga0495604_0005149 3300047317 Bacteria 10354
104 Ga0495674_0009729 3300047319 Bacteria 9127
105 Ga0495674_0048878 3300047319 Bacteria 3740
106 Ga0495674_0110487 3300047319 Bacteria 2331
107 Ga0495674_0123379 3300047319 Bacteria 2187
108 Ga0495683_0016628 3300047323 Bacteria 3818
109 Ga0495683_0021987 3300047323 Bacteria 3282
110 Ga0495687_005901 3300047443 Bacteria 7662
111 Ga0495675_0026551 3300047444 Bacteria 3693
112 Ga0495679_000008 3300047446 Bacteria 367186
113 Ga0495684_0005370 3300047471 Bacteria 9980
114 Ga0495686_0000006 3300047472 Bacteria 770778
115 Ga0495602_0000566 3300048088 Bacteria 34427
116 Ga0495602_0098927 3300048088 Bacteria 2399
117 Ga0496100_0000122 3300048903 Bacteria 44143
118 Ga0496101_0000064 3300048904 Bacteria 124993
119 Ga0496102_0000219 3300048905 Bacteria 75760
120 Ga0496103_0000699 3300048906 Bacteria 24913
121 Ga0496104_0023306 3300048907 Bacteria 5691
122 Ga0496112_0000047 3300048915 Bacteria 84877
123 Ga0496112_0006186 3300048915 Bacteria 10471
124 Ga0496112_0081022 3300048915 Bacteria 3210
125 Ga0496113_0005832 3300048916 Bacteria 7728
126 Ga0496114_0006402 3300048917 Bacteria 9273
127 Ga0496117_0000134 3300048920 Bacteria 161270
128 Ga0496117_0006229 3300048920 Bacteria 12166
129 Ga0496118_0000139 3300048921 Bacteria 128723
130 Ga0496118_0002789 3300048921 Bacteria 22872
131 Ga0496118_0007662 3300048921 Bacteria 11365
132 Ga0496118_0023110 3300048921 Bacteria 5412
133 Ga0496118_0023634 3300048921 Bacteria 5331
134 Ga0496121_0000202 3300048924 Bacteria 131089
135 Ga0496121_0002321 3300048924 Bacteria 29473
136 Ga0496121_0003359 3300048924 Bacteria 22946
137 Ga0496121_0006481 3300048924 Bacteria 14504
138 Ga0496125_0015423 3300048928 Bacteria 7394
139 Ga0496126_0015353 3300048929 Bacteria 7704
140 Ga0495678_012123 3300049459 Bacteria 4094
141 Ga0495682_0014197 3300049460 Bacteria 3021
142 Ga0501048_0128271 3300049582 Bacteria 1794
143 Ga0501067_0046933 3300049583 Bacteria 2397
144 Ga0501070_0021644 3300049586 Bacteria 5392
145 Ga0500568_0002174 3300053139 Bacteria 11810
146 Ga0500622_0000622 3300053156 Bacteria 31963

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046794 Ga0495589_0017318 Ga0495589_0017318_2018_3601 509
2 3300005467 Ga0070706_100000280 Ga0070706_10000028016 517
3 3300005468 Ga0070707_100006259 Ga0070707_10000625911 517
4 3300005536 Ga0070697_100005005 Ga0070697_1000050053 517
5 iso_pu_bacteria 2562617112 2563057765 524
6 iso_pu_bacteria 2711768613 2713473536 524
7 3300039447 Ga0436361_1036049 Ga0436361_1036049_545_2125 526
8 3300026118 Ga0207675_100146581 Ga0207675_1001465812 533
9 3300031247 Ga0265340_10039697 Ga0265340_100396973 537
10 3300013105 Ga0157369_10068446 Ga0157369_100684464 548
11 3300037466 Ga0395898_0206304 Ga0395898_0206304_138_1784 548
12 3300049582 Ga0501048_0128271 Ga0501048_0128271_138_1784 548
13 3300053156 Ga0500622_0000622 Ga0500622_0000622_595_2346 553
14 3300005718 Ga0068866_10022051 Ga0068866_100220512 564
15 3300036401 Ga0373937_0014268 Ga0373937_0014268_3336_5099 567
16 3300010375 Ga0105239_10003616 Ga0105239_100036169 571
17 3300025302 Ga0207426_1001561 Ga0207426_10015619 571
18 3300005262 Ga0065165_1005526 Ga0065165_10055266 572
19 3300009098 Ga0105245_10015597 Ga0105245_100155976 573
20 3300009176 Ga0105242_10021792 Ga0105242_100217923 573
21 3300009177 Ga0105248_10046476 Ga0105248_100464762 573
22 3300013306 Ga0163162_10042081 Ga0163162_100420814 573
23 3300025927 Ga0207687_10022986 Ga0207687_100229863 573
24 3300025938 Ga0207704_10000873 Ga0207704_100008732 573
25 3300025941 Ga0207711_10194695 Ga0207711_101946951 573
26 3300028379 Ga0268266_10140445 Ga0268266_101404451 573
27 3300031911 Ga0307412_10000059 Ga0307412_1000005928 573
28 3300046512 Ga0495610_0000624 Ga0495610_0000624_9805_11592 573
29 3300009093 Ga0105240_10028795 Ga0105240_100287953 574
30 3300049583 Ga0501067_0046933 Ga0501067_0046933_457_2220 574
31 3300009093 Ga0105240_10006662 Ga0105240_1000666213 575
32 3300025913 Ga0207695_10051557 Ga0207695_100515573 575
33 3300037418 Ga0395900_0003215 Ga0395900_0003215_8443_10197 575
34 3300037466 Ga0395898_0003095 Ga0395898_0003095_15305_17059 575
35 3300048920 Ga0496117_0006229 Ga0496117_0006229_9314_11059 575
36 3300048921 Ga0496118_0002789 Ga0496118_0002789_14819_16564 575
37 3300013307 Ga0157372_10080272 Ga0157372_100802723 576
38 3300053139 Ga0500568_0002174 Ga0500568_0002174_7243_9042 576
39 3300005548 Ga0070665_100052923 Ga0070665_1000529234 577
40 3300031507 Ga0307509_10000005 Ga0307509_10000005202 581
41 iso_pu_bacteria 2904690495 2904697475 581
42 iso_pu_bacteria 2908756301 2908762069 582
43 iso_pu_bacteria 2738541296 2738821052 583
44 iso_pu_bacteria 2738541298 2738833534 583
45 iso_pu_bacteria 2738541306 2738876941 583
46 iso_pu_bacteria 2738543002 2739186690 583
47 iso_pu_bacteria 2738543008 2739223534 583
48 iso_pu_bacteria 2921643360 2921644071 583
49 iso_pu_bacteria 2945934425 2945939345 583
50 iso_pu_bacteria 2990703756 2990706688 583
51 iso_pu_bacteria 641736151 642424614 583
52 3300005329 Ga0070683_100128356 Ga0070683_1001283561 584
53 3300005355 Ga0070671_100002452 Ga0070671_1000024528 584
54 3300005367 Ga0070667_100039344 Ga0070667_1000393443 584
55 3300005548 Ga0070665_100060206 Ga0070665_1000602062 584
56 3300005617 Ga0068859_100000493 Ga0068859_10000049331 584
57 3300005842 Ga0068858_100005786 Ga0068858_1000057868 584
58 3300006931 Ga0097620_100000493 Ga0097620_10000049331 584
59 3300009101 Ga0105247_10008387 Ga0105247_100083873 584
60 3300009177 Ga0105248_10091842 Ga0105248_100918422 584
61 3300009553 Ga0105249_10015185 Ga0105249_100151855 584
62 3300013306 Ga0163162_10062800 Ga0163162_100628002 584
63 3300025900 Ga0207710_10001318 Ga0207710_100013183 584
64 3300025944 Ga0207661_10147821 Ga0207661_101478212 584
65 3300026035 Ga0207703_10015494 Ga0207703_100154943 584
66 3300028381 Ga0268264_10099513 Ga0268264_100995132 584
67 3300033180 Ga0307510_10054234 Ga0307510_100542343 584
68 3300048915 Ga0496112_0081022 Ga0496112_0081022_501_2255 584
69 3300048924 Ga0496121_0003359 Ga0496121_0003359_4390_6174 584
70 3300048928 Ga0496125_0015423 Ga0496125_0015423_3834_5618 584
71 3300005329 Ga0070683_100000936 Ga0070683_10000093610 585
72 3300005356 Ga0070674_100086959 Ga0070674_1000869592 585
73 3300005840 Ga0068870_10002574 Ga0068870_100025745 585
74 3300045976 Ga0466967_0010548 Ga0466967_0010548_4210_5967 585
75 3300048915 Ga0496112_0000047 Ga0496112_0000047_31003_32760 585
76 3300048924 Ga0496121_0002321 Ga0496121_0002321_17447_19204 585
77 3300048929 Ga0496126_0015353 Ga0496126_0015353_155_1912 585
78 3300005455 Ga0070663_100008336 Ga0070663_1000083362 586
79 3300005983 Ga0081540_1023412 Ga0081540_10234123 586
80 3300006881 Ga0068865_100030693 Ga0068865_1000306933 586
81 3300013306 Ga0163162_10149789 Ga0163162_101497892 586
82 3300014969 Ga0157376_10018646 Ga0157376_100186464 586
83 3300025921 Ga0207652_10015210 Ga0207652_100152104 586
84 3300049586 Ga0501070_0021644 Ga0501070_0021644_3511_5271 586
85 3300003322 rootL2_10029358 rootL2_100293585 587
86 3300003354 JGI25160J50197_1000043 JGI25160J50197_100004366 587
87 3300005262 Ga0065165_1001379 Ga0065165_10013791 587
88 3300005290 Ga0065712_10079885 Ga0065712_100798852 587
89 3300005336 Ga0070680_100041982 Ga0070680_1000419822 587
90 3300005455 Ga0070663_100076516 Ga0070663_1000765162 587
91 3300005843 Ga0068860_100017947 Ga0068860_1000179474 587
92 3300009177 Ga0105248_10123484 Ga0105248_101234842 587
93 3300014325 Ga0163163_10096370 Ga0163163_100963701 587
94 3300014969 Ga0157376_10096402 Ga0157376_100964022 587
95 3300025295 Ga0209564_1003149 Ga0209564_10031494 587
96 3300025302 Ga0207426_1000014 Ga0207426_1000014165 587
97 3300025941 Ga0207711_10009762 Ga0207711_100097624 587
98 3300025972 Ga0207668_10094649 Ga0207668_100946491 587
99 3300026067 Ga0207678_10078460 Ga0207678_100784602 587
100 3300028381 Ga0268264_10005537 Ga0268264_100055375 587
101 3300031901 Ga0307406_10087797 Ga0307406_100877971 587
102 3300032002 Ga0307416_100015419 Ga0307416_1000154193 587
103 3300035118 Ga0373954_0014318 Ga0373954_0014318_147_1961 587
104 3300035119 Ga0373956_0000859 Ga0373956_0000859_8428_10242 587
105 3300035172 Ga0373955_0004373 Ga0373955_0004373_1944_3758 587
106 3300035724 Ga0373933_0000193 Ga0373933_0000193_13213_15027 587
107 3300036401 Ga0373937_0000407 Ga0373937_0000407_20696_22510 587
108 3300046457 Ga0495590_0013048 Ga0495590_0013048_1262_3025 587
109 3300046459 Ga0495629_0000097 Ga0495629_0000097_73834_75597 587
110 3300046460 Ga0495638_0016465 Ga0495638_0016465_1781_3544 587
111 3300046462 Ga0495651_0022210 Ga0495651_0022210_217_2031 587
112 3300046463 Ga0495653_0000802 Ga0495653_0000802_208_1971 587
113 3300046471 Ga0495650_0015265 Ga0495650_0015265_1953_3716 587
114 3300046472 Ga0495580_0002191 Ga0495580_0002191_564_2327 587
115 3300046472 Ga0495580_0003314 Ga0495580_0003314_755_2518 587
116 3300046472 Ga0495580_0067045 Ga0495580_0067045_268_2031 587
117 3300046474 Ga0495605_0002773 Ga0495605_0002773_4863_6626 587
118 3300046506 Ga0495583_0009741 Ga0495583_0009741_2205_3968 587
119 3300046511 Ga0495608_0009785 Ga0495608_0009785_1272_3086 587
120 3300046513 Ga0495616_0047424 Ga0495616_0047424_116_1879 587
121 3300046517 Ga0495630_0012484 Ga0495630_0012484_557_2320 587
122 3300046524 Ga0495648_0016575 Ga0495648_0016575_2547_4310 587
123 3300046536 Ga0495587_0002799 Ga0495587_0002799_9036_10850 587
124 3300046675 Ga0495657_0032478 Ga0495657_0032478_184_1998 587
125 3300046689 Ga0495613_0071962 Ga0495613_0071962_175_1938 587
126 3300046690 Ga0495624_0015985 Ga0495624_0015985_776_2539 587
127 3300046690 Ga0495624_0030697 Ga0495624_0030697_1230_2993 587
128 3300046809 Ga0495600_0016128 Ga0495600_0016128_321_2135 587
129 3300047317 Ga0495604_0005149 Ga0495604_0005149_2646_4460 587
130 3300047319 Ga0495674_0009729 Ga0495674_0009729_5684_7447 587
131 3300047319 Ga0495674_0048878 Ga0495674_0048878_297_2060 587
132 3300047319 Ga0495674_0110487 Ga0495674_0110487_184_1947 587
133 3300047319 Ga0495674_0123379 Ga0495674_0123379_315_2078 587
134 3300047323 Ga0495683_0016628 Ga0495683_0016628_2030_3793 587
135 3300047323 Ga0495683_0021987 Ga0495683_0021987_226_1989 587
136 3300047443 Ga0495687_005901 Ga0495687_005901_2590_4353 587
137 3300047444 Ga0495675_0026551 Ga0495675_0026551_642_2405 587
138 3300047446 Ga0495679_000008 Ga0495679_000008_232022_233785 587
139 3300047471 Ga0495684_0005370 Ga0495684_0005370_4301_6115 587
140 3300047472 Ga0495686_0000006 Ga0495686_0000006_689220_690986 587
141 3300048088 Ga0495602_0000566 Ga0495602_0000566_6759_8573 587
142 3300048088 Ga0495602_0098927 Ga0495602_0098927_255_2018 587
143 3300048903 Ga0496100_0000122 Ga0496100_0000122_1480_3246 587
144 3300048904 Ga0496101_0000064 Ga0496101_0000064_89802_91568 587
145 3300048905 Ga0496102_0000219 Ga0496102_0000219_33594_35360 587
146 3300048906 Ga0496103_0000699 Ga0496103_0000699_10918_12684 587
147 3300048907 Ga0496104_0023306 Ga0496104_0023306_1394_3160 587
148 3300048915 Ga0496112_0006186 Ga0496112_0006186_8616_10379 587
149 3300048916 Ga0496113_0005832 Ga0496113_0005832_5832_7595 587
150 3300048917 Ga0496114_0006402 Ga0496114_0006402_123_1901 587
151 3300048920 Ga0496117_0000134 Ga0496117_0000134_125475_127241 587
152 3300048921 Ga0496118_0000139 Ga0496118_0000139_1473_3239 587
153 3300048921 Ga0496118_0007662 Ga0496118_0007662_727_2490 587
154 3300048921 Ga0496118_0023110 Ga0496118_0023110_2107_3870 587
155 3300048921 Ga0496118_0023634 Ga0496118_0023634_335_2098 587
156 3300048924 Ga0496121_0000202 Ga0496121_0000202_107193_108959 587
157 3300048924 Ga0496121_0006481 Ga0496121_0006481_9766_11529 587
158 3300049459 Ga0495678_012123 Ga0495678_012123_1114_2877 587
159 3300049460 Ga0495682_0014197 Ga0495682_0014197_695_2458 587

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03473

MOSC

MOSC domain

108

221

0.98

PF03475

YiiM_3-alpha

YiiM-like, 3-alpha helix domain

230

273

0.97

PF00175

NAD_binding_1

Oxidoreductase NAD-binding domain

408

517

0.91

PF00111

Fer2

2Fe-2S iron-sulfur cluster binding domain

570

639

0.81

PF00970

FAD_binding_6

Oxidoreductase FAD-binding domain

299

398

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8762 236 475
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8658 236 475
5yhh-assembly1.cif.gz_A crystal structure of yiim from geobacillus stearothermophilus 0.8474 1 211
6o0a-assembly1.cif.gz_A crystal structure of flavohemoglobin from malassezia yamatoensis with bound fad and heme determined by iron sad phasing 0.8471 233 473
1o65-assembly1.cif.gz_A crystal structure of an hypothetical protein 0.8419 1 219
ID Description Score Start End Superfamily
1gvhA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.954 237 340 2.40.30.10
af_Q9URY5_176_283_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.944 236 339 2.40.30.10
af_Q59MV6_163_265_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9429 236 337 2.40.30.10
af_P76254_2_105_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9314 238 336 2.40.30.10
1gvhA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.928 237 340 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A1X7MBN9-F1-model_v4 deleted 0.9382 236 386
AF-A0A0S3UD83-F1-model_v4 MOSC domain-containing protein 0.9282 99 211 GO:0003824
GO:0030151
GO:0030170
AF-A0A3N5U138-F1-model_v4 MOSC domain-containing protein 0.9158 93 211 GO:0003824
GO:0030151
GO:0030170
AF-A0A7X6VSP0-F1-model_v4 FAD-binding FR-type domain-containing protein 0.9148 236 379 GO:0016491
AF-A0A376U9S5-F1-model_v4 Putative oxidoreductase (EC 1.-.-.-) 0.9114 235 336 GO:0016491
GO:0051537

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pLDDT pTM Quality
70.56 0.51 Medium
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Predicted Structure (AlphaFold2)

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