F230937

General Info

Members Datasets Scaffolds Average Seq Length
158 122 316 482

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995463766|2995468747
Length 543
Sequence DHQADEADAPVGDAASGSPAPEGPSHASEVADDAAAHRRPQPRLPVPPPEDTVVVPADEDPVAAVGSELFGGPPGRRALLGVGWWSAARMLAVLTIVIFALGMIQKVPCYDSGWFFGATAQYDHACYSDIPHLFSLRGFNLPGNIPYVDKIPGSTDPSMQYLEYPVLTGVFMWAAAALTPGTGAEMYREQMFWLVNAGMLMICAVVAVVAVSRTHRRRPWDALLFALAPVLALDSTINWDLLAVALTAVGMALWSRRYPVWAGVLLGLATAAKLYPVFLLGPLLLLCLRAGRMQEFWRAFAGAAVAWLVVDIPFMVANFSGWATFYTFSESRGVDFGSFWLILSQNGWLNVSTGTVNALTAVLLGLCCLGIAWLALGAQRRPRFAQLAFLVIAAFVLTNKVYSPQYVLWLVPLAVLARPRWRDFLIWQSCEVLYFLGIWYYLAYTSSTVQKGLPMDWYHAAVAVHIMGTLFMCVMIVRDILLPSWDPVRADGSDDPSGGVLDGAGDVFTLSGVKVQPAAVERRSTSPAGPTSFAAGTAADPGA

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
7 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
8 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
9 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
10 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
11 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
12 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
13 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
14 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
16 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
17 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
18 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
19 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
20 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
21 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
22 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
23 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
24 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
25 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
26 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
27 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
28 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
29 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
30 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
31 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
32 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
33 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
34 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
35 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
36 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
37 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
38 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
39 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
40 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
41 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
42 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
45 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
46 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
47 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
48 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
49 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
50 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
51 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
52 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
53 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
54 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
55 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
62 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
65 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
66 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
67 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
70 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
71 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
72 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
73 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
74 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
75 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
76 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
77 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
78 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
93 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
94 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
95 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
96 2643221548 Streptomyces sp. Root55 Isolate Unclassified
97 2643221578 Streptomyces sp. Root63 Isolate Unclassified
98 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
99 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
100 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
101 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
102 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
103 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
104 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
105 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
106 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
107 2867369537 Streptomyces sp. Z26 Isolate Unclassified
108 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
109 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
110 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
111 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
112 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
113 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
114 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
115 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
116 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
117 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
118 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
119 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
120 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
121 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
122 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.75
Metatranscriptomes 1.9
Isolates 18.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.43
Nodule 0.63
Rhizoplane 0.63
Rhizosphere 77.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10008631 3300001990 Bacteria 3408
2 Ga0006562J51391_1022325 3300003578 Bacteria 2565
3 Ga0006562J51391_1297823 3300003578 Bacteria 2229
4 Ga0006562J51391_1297824 3300003578 Bacteria 2229
5 Ga0081455_10015051 3300005937 Bacteria 7533
6 Ga0075368_10014005 3300006042 Bacteria 2954
7 Ga0075363_100005991 3300006048 Bacteria 5482
8 Ga0075432_10000278 3300006058 Bacteria 14230
9 Ga0075367_10000116 3300006178 Bacteria 22957
10 Ga0099826_10078753 3300006948 Bacteria 2062
11 Ga0105246_10003847 3300011119 Bacteria 9104
12 Ga0157372_10057774 3300013307 Bacteria 4337
13 Ga0183367_1008 3300015688 Bacteria 490626
14 Ga0209148_1001568 3300025254 Bacteria 10917
15 Ga0207426_1005156 3300025302 Bacteria 6082
16 Ga0207709_10006342 3300025935 Bacteria 6639
17 Ga0307515_10051277 3300028794 Bacteria 6158
18 Ga0307512_10016261 3300030522 Bacteria 6871
19 Ga0307513_10136830 3300031456 Bacteria 2383
20 Ga0307408_100037644 3300031548 Bacteria 3408
21 Ga0307408_100077351 3300031548 Bacteria 2477
22 Ga0307408_100096468 3300031548 Bacteria 2243
23 Ga0307508_10010953 3300031616 Bacteria 8292
24 Ga0307508_10021437 3300031616 Bacteria 5875
25 Ga0307514_10004638 3300031649 Bacteria 12601
26 Ga0316576_10032731 3300031727 Bacteria 3696
27 Ga0316578_10034663 3300031728 Bacteria 2899
28 Ga0307516_10022262 3300031730 Bacteria 6510
29 Ga0307405_10005711 3300031731 Bacteria 6038
30 Ga0307405_10007584 3300031731 Bacteria 5439
31 Ga0307405_10018296 3300031731 Bacteria 3861
32 Ga0307413_10015985 3300031824 Bacteria 3861
33 Ga0307518_10097352 3300031838 Bacteria 2110
34 Ga0307518_10106833 3300031838 Bacteria 1998
35 Ga0307410_10002829 3300031852 Bacteria 8526
36 Ga0307410_10055412 3300031852 Bacteria 2691
37 Ga0307410_10129026 3300031852 Bacteria 1855
38 Ga0307406_10044427 3300031901 Bacteria 2784
39 Ga0307406_10106533 3300031901 Bacteria 1920
40 Ga0307407_10005724 3300031903 Bacteria 5429
41 Ga0307407_10023551 3300031903 Bacteria 3214
42 Ga0307409_100009872 3300031995 Bacteria 5892
43 Ga0307409_100009936 3300031995 Bacteria 5877
44 Ga0307409_100180246 3300031995 Bacteria 1869
45 Ga0307416_100039480 3300032002 Bacteria 3655
46 Ga0307416_100060164 3300032002 Bacteria 3091
47 Ga0307416_100072339 3300032002 Bacteria 2869
48 Ga0307416_100165870 3300032002 Bacteria 2048
49 Ga0307411_10015230 3300032005 Bacteria 4312
50 Ga0307411_10018676 3300032005 Bacteria 3985
51 Ga0307411_10021014 3300032005 Bacteria 3809
52 Ga0307415_100068699 3300032126 Bacteria 2481
53 Ga0307507_10054947 3300033179 Bacteria 3782
54 Ga0307510_10047101 3300033180 Bacteria 4624
55 Ga0316574_0012653 3300035398 Bacteria 4832
56 Ga0395898_0018056 3300037466 Bacteria 7196
57 Ga0395905_0070565 3300037471 Bacteria 3274
58 Ga0439438_006372 3300041405 Bacteria 4177
59 Ga0439439_0007173 3300041406 Bacteria 2599
60 Ga0439433_0000222 3300041999 Bacteria 9354
61 Ga0439433_0003360 3300041999 Bacteria 3430
62 Ga0439442_000476 3300042002 Bacteria 9130
63 Ga0439442_004035 3300042002 Bacteria 2911
64 Ga0439449_0002022 3300042007 Bacteria 7985
65 Ga0439449_0011127 3300042007 Bacteria 3391
66 Ga0439449_0014362 3300042007 Bacteria 2977
67 Ga0439452_002217 3300042010 Bacteria 7313
68 Ga0439455_0001023 3300042012 Bacteria 4410
69 Ga0439457_000742 3300042014 Bacteria 9725
70 Ga0439462_0002847 3300042015 Bacteria 4089
71 Ga0450920_000629 3300042122 Bacteria 5617
72 Ga0450923_005087 3300042125 Bacteria 2106
73 Ga0450907_010387 3300042146 Bacteria 1545
74 Ga0439446_0002632 3300042156 Bacteria 4332
75 Ga0450908_002108 3300042184 Bacteria 3893
76 Ga0450909_000874 3300042185 Bacteria 4109
77 Ga0439434_0000311 3300042435 Bacteria 13804
78 Ga0450918_001320 3300042531 Bacteria 4988
79 Ga0466969_0002452 3300044656 Bacteria 9893
80 Ga0466961_0007070 3300044693 Bacteria 7141
81 Ga0466961_0007997 3300044693 Bacteria 6741
82 Ga0466963_0048842 3300044694 Bacteria 2797
83 Ga0466959_0006874 3300045049 Bacteria 7936
84 Ga0466967_0010073 3300045976 Bacteria 7065
85 Ga0495592_0006868 3300046454 Bacteria 8497
86 Ga0495603_0035685 3300046455 Bacteria 2986
87 Ga0495629_0001004 3300046459 Bacteria 22632
88 Ga0495629_0003872 3300046459 Bacteria 11281
89 Ga0495580_0005297 3300046472 Bacteria 10709
90 Ga0495585_0023353 3300046492 Bacteria 3549
91 Ga0495643_0021470 3300046522 Bacteria 3703
92 Ga0495588_0071102 3300046674 Bacteria 1809
93 Ga0495613_0020358 3300046689 Bacteria 4946
94 Ga0495604_0003204 3300047317 Bacteria 13077
95 Ga0495636_0048985 3300047318 Bacteria 1766
96 Ga0495672_0052580 3300047320 Bacteria 2392
97 Ga0495676_0009594 3300047321 Bacteria 8811
98 Ga0495676_0041091 3300047321 Bacteria 3809
99 Ga0495676_0166028 3300047321 Bacteria 1557
100 Ga0495675_0008391 3300047444 Bacteria 6397
101 Ga0495675_0117341 3300047444 Bacteria 1659
102 Ga0495677_0009393 3300047445 Bacteria 3612
103 Ga0495685_001828 3300047447 Bacteria 6567
104 Ga0495684_0085780 3300047471 Bacteria 2387
105 Ga0495686_0096993 3300047472 Bacteria 1783
106 Ga0495614_0001645 3300048089 Bacteria 9740
107 Ga0501032_0004548 3300049569 Bacteria 10436
108 Ga0501032_0084987 3300049569 Bacteria 2104
109 Ga0501033_0008883 3300049570 Bacteria 7762
110 Ga0501034_0012059 3300049571 Bacteria 8935
111 Ga0501034_0025491 3300049571 Bacteria 6021
112 Ga0501037_0008215 3300049573 Bacteria 7652
113 Ga0501038_0045032 3300049574 Bacteria 3831
114 Ga0501038_0153057 3300049574 Bacteria 1879
115 Ga0501043_0007108 3300049579 Bacteria 8906
116 Ga0501043_0028743 3300049579 Bacteria 4364
117 Ga0501046_0008620 3300049580 Bacteria 8867
118 Ga0501047_0013751 3300049581 Bacteria 7685
119 Ga0501047_0071154 3300049581 Bacteria 3348
120 Ga0501047_0102163 3300049581 Bacteria 2746
121 Ga0501048_0007892 3300049582 Bacteria 8062
122 Ga0501257_015526 3300049686 Bacteria 1760
123 Ga0501080_0069961 3300049742 Bacteria 3264
124 Ga0501035_0007232 3300049822 Bacteria 10385
125 Ga0501044_0032227 3300049823 Bacteria 5510
126 Ga0501044_0032365 3300049823 Bacteria 5498
127 Ga0501044_0082159 3300049823 Bacteria 3260
128 nmdc:mga06z11_215_c1 3300050494 Bacteria 23038
129 Ga0500573_0003164 3300053140 Bacteria 8450
130 2995468747 2995463766 Bacteria 8577691
131 2585298458 2582581312 Bacteria 7308206
132 2643763149 2643221548 Bacteria 8053412
133 2643900162 2643221578 Bacteria 9213798
134 2644018204 2643221601 Bacteria 7493239
135 2644174242 2643221631 Bacteria 8168043
136 2644405614 2643221673 Bacteria 9196637
137 2768642437 2767802112 Bacteria 6465194
138 2793975382 2791355406 Bacteria 11364898
139 2819697317 2818991463 Bacteria 7948711
140 2819741595 2818991472 Bacteria 10089953
141 2862709127 2862705112 Bacteria 6563286
142 2867347522 2867346516 Bacteria 7608576
143 2867372459 2867369537 Bacteria 6501581
144 2875395168 2875391855 Bacteria 7600475
145 2919053876 2919051321 Bacteria 4210889
146 2935390792 2935390628 Bacteria 7043367
147 2954744659 2954740390 Bacteria 10229294
148 2966602115 2966598605 Bacteria 7676064
149 2990049921 2990044586 Bacteria 6603797
150 2990090626 2990088156 Bacteria 6657676
151 3006488484 3006486233 Bacteria 8157040
152 8008486002 8008485437 Bacteria 7198341
153 8025525318 8025524527 Bacteria 7197316
154 8047897575 8047893842 Bacteria 11723082
155 8048127838 8048127548 Bacteria 11053136
156 8048361295 8048356638 Bacteria 11044339
157 8048374562 8048369669 Bacteria 11666822
158 8048383660 8048379754 Bacteria 11877923
159 JGI24737J22298_10008631
160 Ga0006562J51391_1022325
161 Ga0006562J51391_1297823
162 Ga0006562J51391_1297824
163 Ga0081455_10015051
164 Ga0075368_10014005
165 Ga0075363_100005991
166 Ga0075432_10000278
167 Ga0075367_10000116
168 Ga0099826_10078753
169 Ga0105246_10003847
170 Ga0157372_10057774
171 Ga0183367_1008
172 Ga0209148_1001568
173 Ga0207426_1005156
174 Ga0207709_10006342
175 Ga0307515_10051277
176 Ga0307512_10016261
177 Ga0307513_10136830
178 Ga0307408_100037644
179 Ga0307408_100077351
180 Ga0307408_100096468
181 Ga0307508_10010953
182 Ga0307508_10021437
183 Ga0307514_10004638
184 Ga0316576_10032731
185 Ga0316578_10034663
186 Ga0307516_10022262
187 Ga0307405_10005711
188 Ga0307405_10007584
189 Ga0307405_10018296
190 Ga0307413_10015985
191 Ga0307518_10097352
192 Ga0307518_10106833
193 Ga0307410_10002829
194 Ga0307410_10055412
195 Ga0307410_10129026
196 Ga0307406_10044427
197 Ga0307406_10106533
198 Ga0307407_10005724
199 Ga0307407_10023551
200 Ga0307409_100009872
201 Ga0307409_100009936
202 Ga0307409_100180246
203 Ga0307416_100039480
204 Ga0307416_100060164
205 Ga0307416_100072339
206 Ga0307416_100165870
207 Ga0307411_10015230
208 Ga0307411_10018676
209 Ga0307411_10021014
210 Ga0307415_100068699
211 Ga0307507_10054947
212 Ga0307510_10047101
213 Ga0316574_0012653
214 Ga0395898_0018056
215 Ga0395905_0070565
216 Ga0439438_006372
217 Ga0439439_0007173
218 Ga0439433_0000222
219 Ga0439433_0003360
220 Ga0439442_000476
221 Ga0439442_004035
222 Ga0439449_0002022
223 Ga0439449_0011127
224 Ga0439449_0014362
225 Ga0439452_002217
226 Ga0439455_0001023
227 Ga0439457_000742
228 Ga0439462_0002847
229 Ga0450920_000629
230 Ga0450923_005087
231 Ga0450907_010387
232 Ga0439446_0002632
233 Ga0450908_002108
234 Ga0450909_000874
235 Ga0439434_0000311
236 Ga0450918_001320
237 Ga0466969_0002452
238 Ga0466961_0007070
239 Ga0466961_0007997
240 Ga0466963_0048842
241 Ga0466959_0006874
242 Ga0466967_0010073
243 Ga0495592_0006868
244 Ga0495603_0035685
245 Ga0495629_0001004
246 Ga0495629_0003872
247 Ga0495580_0005297
248 Ga0495585_0023353
249 Ga0495643_0021470
250 Ga0495588_0071102
251 Ga0495613_0020358
252 Ga0495604_0003204
253 Ga0495636_0048985
254 Ga0495672_0052580
255 Ga0495676_0009594
256 Ga0495676_0041091
257 Ga0495676_0166028
258 Ga0495675_0008391
259 Ga0495675_0117341
260 Ga0495677_0009393
261 Ga0495685_001828
262 Ga0495684_0085780
263 Ga0495686_0096993
264 Ga0495614_0001645
265 Ga0501032_0004548
266 Ga0501032_0084987
267 Ga0501033_0008883
268 Ga0501034_0012059
269 Ga0501034_0025491
270 Ga0501037_0008215
271 Ga0501038_0045032
272 Ga0501038_0153057
273 Ga0501043_0007108
274 Ga0501043_0028743
275 Ga0501046_0008620
276 Ga0501047_0013751
277 Ga0501047_0071154
278 Ga0501047_0102163
279 Ga0501048_0007892
280 Ga0501257_015526
281 Ga0501080_0069961
282 Ga0501035_0007232
283 Ga0501044_0032227
284 Ga0501044_0032365
285 Ga0501044_0082159
286 nmdc:mga06z11_215_c1
287 Ga0500573_0003164
288 2995468747
289 2585298458
290 2643763149
291 2643900162
292 2644018204
293 2644174242
294 2644405614
295 2768642437
296 2793975382
297 2819697317
298 2819741595
299 2862709127
300 2867347522
301 2867372459
302 2875395168
303 2919053876
304 2935390792
305 2954744659
306 2966602115
307 2990049921
308 2990090626
309 3006488484
310 8008486002
311 8025525318
312 8047897575
313 8048127838
314 8048361295
315 8048374562
316 8048383660

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09594

GT87

Glycosyltransferase family 87

160

398

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sni-assembly1.cif.gz_X cryo-em structure of nanodisc reconstituted yeast alg6 in complex with 6ag9 fab 0.6436 90 423
8imy-assembly1.cif.gz_U cryo-em structure of gpi-t (inactive mutant) with gpi and proulbp2, a proprotein substrate 0.4807 50 433
6sni-assembly1.cif.gz_X cryo-em structure of nanodisc reconstituted yeast alg6 in complex with 6ag9 fab 0.4771 90 423
8imy-assembly1.cif.gz_U cryo-em structure of gpi-t (inactive mutant) with gpi and proulbp2, a proprotein substrate 0.4456 50 433
5f15-assembly1.cif.gz_A crystal structure of arnt from cupriavidus metallidurans bound to undecaprenyl phosphate 0.4152 93 440
ID Description Score Start End Superfamily
af_A0A096RDL4_20_236_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.2594 162 440 1.25.40.10
af_A0A096RDL4_20_236_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.2492 162 440 1.25.40.10
af_P56627_21_270_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.2407 189 431 1.20.1080.10
af_O14520_32_278_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.2363 189 431 1.20.1080.10
af_P56627_21_270_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.2261 189 431 1.20.1080.10
ID Description Score Start End GO Terms
AF-A0A6I2Y343-F1-model_v4 DUF2029 domain-containing protein 0.9428 175 458 GO:0005886
GO:0016758
AF-A0A2S8MJ60-F1-model_v4 deleted 0.9279 189 346
AF-A0A353ZP39-F1-model_v4 DUF2029 domain-containing protein 0.927 170 464 GO:0005886
GO:0016758
AF-A0A4Y8ZDF2-F1-model_v4 deleted 0.9268 246 439
AF-A0A1J7C7K2-F1-model_v4 DUF2029 domain-containing protein 0.925 17 458 GO:0005886
GO:0016758

Map