F229945

General Info

Members Datasets Scaffolds Average Seq Length
158 122 316 201

Family's Representative Sequence

Representative Sequence 3300028558|Ga0265326_10000032|Ga0265326_1000003270
Length 219
Sequence VLRPRSPILLLAALGAFALVLLTGCGSSTKSGPCQTVDQPAPKGPQHLRAPTSTLDPSKTWTATVVTNCGTFAIQLDVARAPKTSASFASLTKKGFYDDLTFHRIAQGFVIQGGDPQGDGSGGPGYTIVETPPKNLHYTHGVVAMAKTATDPDGASGSQFFIVTAPDAGLPPQYALLGRVVQGLDVVDAIGALPLQQGATTDGPPAQPVVIQSVTLSSH

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
51 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
52 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
53 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
54 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
57 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
65 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
69 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
74 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
75 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
84 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
85 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
86 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
87 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
107 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
112 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
115 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
116 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
117 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
118 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
119 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.53
Nodule 0
Rhizoplane 9.49
Rhizosphere 86.08
Stem 0
Stem Tuber 0
Unclassified 2.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10000032 3300028558 Bacteria 94371
2 Ga0070683_100006210 3300005329 Bacteria 10018
3 Ga0070683_100024915 3300005329 Bacteria 5365
4 Ga0070683_100452023 3300005329 Bacteria 1226
5 Ga0070690_100178221 3300005330 Bacteria 1467
6 Ga0070682_100000075 3300005337 Bacteria 90547
7 Ga0068868_100001866 3300005338 Bacteria 14467
8 Ga0070689_100120602 3300005340 Bacteria 2094
9 Ga0070675_100000106 3300005354 Bacteria 49336
10 Ga0070674_100000005 3300005356 Bacteria 168443
11 Ga0070667_100087546 3300005367 Bacteria 2673
12 Ga0070714_100000091 3300005435 Bacteria 76316
13 Ga0070714_100000560 3300005435 Bacteria 26744
14 Ga0070713_100000010 3300005436 Bacteria 151790
15 Ga0070684_100071725 3300005535 Bacteria 3048
16 Ga0070672_100000001 3300005543 Bacteria 204624
17 Ga0070686_100162287 3300005544 Bacteria 1575
18 Ga0070686_100309315 3300005544 Bacteria 1175
19 Ga0070665_100005640 3300005548 Bacteria 12868
20 Ga0070664_100057440 3300005564 Bacteria 3308
21 Ga0068854_100000116 3300005578 Bacteria 54986
22 Ga0068864_100000031 3300005618 Bacteria 215331
23 Ga0068866_10000262 3300005718 Bacteria 24827
24 Ga0068863_100000022 3300005841 Bacteria 188278
25 Ga0070717_10000019 3300006028 Bacteria 178051
26 Ga0075363_100239896 3300006048 Bacteria 1042
27 Ga0070712_100008158 3300006175 Bacteria 6576
28 Ga0105243_10076453 3300009148 Bacteria 2720
29 Ga0157370_10148327 3300013104 Bacteria 2183
30 Ga0157378_10005546 3300013297 Bacteria 11048
31 Ga0157372_10000204 3300013307 Bacteria 65798
32 Ga0163163_10090187 3300014325 Bacteria 3079
33 Ga0157380_10001049 3300014326 Bacteria 17675
34 Ga0207642_10000354 3300025899 Bacteria 13777
35 Ga0207693_10017228 3300025915 Bacteria 5761
36 Ga0207693_10224112 3300025915 Bacteria 1477
37 Ga0207663_10005375 3300025916 Bacteria 6444
38 Ga0207659_10000013 3300025926 Bacteria 172742
39 Ga0207700_10000007 3300025928 Bacteria 345720
40 Ga0207700_10011893 3300025928 Bacteria 5579
41 Ga0207664_10000004 3300025929 Bacteria 493014
42 Ga0207664_10000814 3300025929 Bacteria 21180
43 Ga0207690_10002231 3300025932 Bacteria 11820
44 Ga0207709_10044467 3300025935 Bacteria 2683
45 Ga0207709_10139872 3300025935 Bacteria 1662
46 Ga0207670_10090593 3300025936 Bacteria 2161
47 Ga0207669_10000006 3300025937 Bacteria 176348
48 Ga0207691_10000529 3300025940 Bacteria 38127
49 Ga0207711_10926432 3300025941 Unclassified 810
50 Ga0207661_10000988 3300025944 Bacteria 18799
51 Ga0207661_10004648 3300025944 Bacteria 9616
52 Ga0207661_10064553 3300025944 Bacteria 2968
53 Ga0207679_10128113 3300025945 Unclassified 2032
54 Ga0207640_10000134 3300025981 Bacteria 54961
55 Ga0207677_10352427 3300026023 Bacteria 1234
56 Ga0207641_10000016 3300026088 Bacteria 307363
57 Ga0207676_10000031 3300026095 Bacteria 215877
58 Ga0207683_10028825 3300026121 Bacteria 4803
59 Ga0207683_10892863 3300026121 Bacteria 825
60 Ga0268266_10004992 3300028379 Bacteria 12539
61 Ga0268266_10085692 3300028379 Bacteria 2753
62 Ga0265337_1000372 3300028556 Bacteria 24062
63 Ga0265326_10000092 3300028558 Bacteria 46613
64 Ga0265319_1000870 3300028563 Bacteria 19199
65 Ga0265334_10000002 3300028573 Bacteria 325014
66 Ga0265323_10092940 3300028653 Bacteria 1006
67 Ga0265322_10000029 3300028654 Bacteria 82867
68 Ga0265338_10007460 3300028800 Bacteria 13562
69 Ga0265338_10140837 3300028800 Bacteria 1889
70 Ga0265324_10000423 3300029957 Bacteria 30311
71 Ga0265324_10001186 3300029957 Bacteria 15526
72 Ga0265328_10003646 3300031239 Bacteria 6787
73 Ga0265320_10000011 3300031240 Bacteria 249534
74 Ga0265331_10003716 3300031250 Bacteria 9705
75 Ga0265327_10000015 3300031251 Bacteria 496677
76 Ga0265327_10088546 3300031251 Bacteria 1514
77 Ga0265316_10015977 3300031344 Bacteria 6533
78 Ga0265314_10000361 3300031711 Bacteria 63269
79 Ga0265314_10100606 3300031711 Bacteria 1859
80 Ga0307416_100149706 3300032002 Bacteria 2138
81 Ga0373954_0027410 3300035118 Bacteria 2615
82 Ga0451847_0133290 3300041503 Bacteria 1037
83 Ga0466961_0036203 3300044693 Bacteria 3168
84 Ga0466963_0006811 3300044694 Bacteria 6797
85 Ga0466970_0101513 3300044765 Bacteria 1567
86 Ga0466957_0234307 3300044842 Bacteria 1216
87 Ga0466967_0071393 3300045976 Bacteria 3109
88 Ga0466967_0077970 3300045976 Bacteria 2984
89 Ga0495603_0000596 3300046455 Bacteria 20312
90 Ga0495629_0000411 3300046459 Bacteria 35904
91 Ga0495629_0429197 3300046459 Bacteria 896
92 Ga0495641_0038734 3300046461 Bacteria 2226
93 Ga0495653_0033576 3300046463 Bacteria 4064
94 Ga0495606_0000586 3300046507 Bacteria 57795
95 Ga0495608_0000007 3300046511 Bacteria 313495
96 Ga0495610_0050207 3300046512 Bacteria 2038
97 Ga0495628_0139949 3300046516 Bacteria 1847
98 Ga0495628_0275215 3300046516 Bacteria 1251
99 Ga0495628_0288270 3300046516 Bacteria 1217
100 Ga0495630_0000075 3300046517 Bacteria 77378
101 Ga0495630_0000176 3300046517 Bacteria 49731
102 Ga0495630_0006550 3300046517 Bacteria 8295
103 Ga0495652_0167752 3300046529 Bacteria 1697
104 Ga0495667_0000020 3300046559 Bacteria 180876
105 Ga0495635_0000076 3300046663 Bacteria 61665
106 Ga0495635_0016189 3300046663 Bacteria 5205
107 Ga0495588_0000187 3300046674 Bacteria 67620
108 Ga0495657_0000001 3300046675 Bacteria 445641
109 Ga0495657_0009230 3300046675 Bacteria 7484
110 Ga0495647_0000081 3300046681 Bacteria 23561
111 Ga0495658_0002140 3300046683 Bacteria 10004
112 Ga0495658_0457964 3300046683 Bacteria 815
113 Ga0495613_0000041 3300046689 Bacteria 130784
114 Ga0495624_0000027 3300046690 Bacteria 93611
115 Ga0495600_0001753 3300046809 Bacteria 12131
116 Ga0495600_0083354 3300046809 Bacteria 2087
117 Ga0495676_0000805 3300047321 Bacteria 26189
118 Ga0495680_0015596 3300047322 Bacteria 6552
119 Ga0495680_0086739 3300047322 Bacteria 2355
120 Ga0495675_0000055 3300047444 Bacteria 77878
121 Ga0495684_0173668 3300047471 Bacteria 1601
122 Ga0495593_0097469 3300047673 Bacteria 1510
123 Ga0496100_0000001 3300048903 Bacteria 530179
124 Ga0496101_0000004 3300048904 Bacteria 331599
125 Ga0496104_0000387 3300048907 Bacteria 38531
126 Ga0496104_0068705 3300048907 Bacteria 3367
127 Ga0496105_0001994 3300048908 Bacteria 14717
128 Ga0496105_0178690 3300048908 Bacteria 1738
129 Ga0496106_0000076 3300048909 Bacteria 79088
130 Ga0496106_0000461 3300048909 Bacteria 29143
131 Ga0496107_0000005 3300048910 Bacteria 281747
132 Ga0496108_0001157 3300048911 Bacteria 20581
133 Ga0496108_0111703 3300048911 Bacteria 2338
134 Ga0496109_0000261 3300048912 Bacteria 50812
135 Ga0496111_0142941 3300048914 Bacteria 1773
136 Ga0496113_0000027 3300048916 Bacteria 63463
137 Ga0496115_0030357 3300048918 Bacteria 4251
138 Ga0496119_0287538 3300048922 Bacteria 815
139 Ga0496124_0226031 3300048927 Bacteria 1403
140 Ga0501042_0089160 3300049578 Bacteria 2213
141 Ga0501075_0043668 3300049591 Bacteria 3362
142 Ga0501076_0225009 3300049592 Bacteria 1533
143 Ga0501045_0050277 3300049824 Bacteria 3041
144 nmdc:mga0yw44_508849_c1 3300050492 Unclassified 817
145 nmdc:mga0qj67_245893_c1 3300050509 Unclassified 1451
146 Ga0495601_0000043 3300053077 Bacteria 77025
147 Ga0495601_0000535 3300053077 Bacteria 20089
148 Ga0495601_0027536 3300053077 Bacteria 3514
149 Ga0495612_0007813 3300053078 Bacteria 4363
150 Ga0495595_0000002 3300053084 Bacteria 445641
151 Ga0495595_0152410 3300053084 Bacteria 1138
152 Ga0495619_0000494 3300053085 Bacteria 26437
153 Ga0495619_0000827 3300053085 Bacteria 20290
154 Ga0500566_0013791 3300053094 Bacteria 4755
155 Ga0500641_0006256 3300053096 Bacteria 4224
156 Ga0501084_0052600 3300054114 Bacteria 3407
157 Ga0501082_0146026 3300060353 Bacteria 2053
158 Ga0530510_0009983 3300061734 Bacteria 6661
159 Ga0265326_10000032
160 Ga0070683_100006210
161 Ga0070683_100024915
162 Ga0070683_100452023
163 Ga0070690_100178221
164 Ga0070682_100000075
165 Ga0068868_100001866
166 Ga0070689_100120602
167 Ga0070675_100000106
168 Ga0070674_100000005
169 Ga0070667_100087546
170 Ga0070714_100000091
171 Ga0070714_100000560
172 Ga0070713_100000010
173 Ga0070684_100071725
174 Ga0070672_100000001
175 Ga0070686_100162287
176 Ga0070686_100309315
177 Ga0070665_100005640
178 Ga0070664_100057440
179 Ga0068854_100000116
180 Ga0068864_100000031
181 Ga0068866_10000262
182 Ga0068863_100000022
183 Ga0070717_10000019
184 Ga0075363_100239896
185 Ga0070712_100008158
186 Ga0105243_10076453
187 Ga0157370_10148327
188 Ga0157378_10005546
189 Ga0157372_10000204
190 Ga0163163_10090187
191 Ga0157380_10001049
192 Ga0207642_10000354
193 Ga0207693_10017228
194 Ga0207693_10224112
195 Ga0207663_10005375
196 Ga0207659_10000013
197 Ga0207700_10000007
198 Ga0207700_10011893
199 Ga0207664_10000004
200 Ga0207664_10000814
201 Ga0207690_10002231
202 Ga0207709_10044467
203 Ga0207709_10139872
204 Ga0207670_10090593
205 Ga0207669_10000006
206 Ga0207691_10000529
207 Ga0207711_10926432
208 Ga0207661_10000988
209 Ga0207661_10004648
210 Ga0207661_10064553
211 Ga0207679_10128113
212 Ga0207640_10000134
213 Ga0207677_10352427
214 Ga0207641_10000016
215 Ga0207676_10000031
216 Ga0207683_10028825
217 Ga0207683_10892863
218 Ga0268266_10004992
219 Ga0268266_10085692
220 Ga0265337_1000372
221 Ga0265326_10000092
222 Ga0265319_1000870
223 Ga0265334_10000002
224 Ga0265323_10092940
225 Ga0265322_10000029
226 Ga0265338_10007460
227 Ga0265338_10140837
228 Ga0265324_10000423
229 Ga0265324_10001186
230 Ga0265328_10003646
231 Ga0265320_10000011
232 Ga0265331_10003716
233 Ga0265327_10000015
234 Ga0265327_10088546
235 Ga0265316_10015977
236 Ga0265314_10000361
237 Ga0265314_10100606
238 Ga0307416_100149706
239 Ga0373954_0027410
240 Ga0451847_0133290
241 Ga0466961_0036203
242 Ga0466963_0006811
243 Ga0466970_0101513
244 Ga0466957_0234307
245 Ga0466967_0071393
246 Ga0466967_0077970
247 Ga0495603_0000596
248 Ga0495629_0000411
249 Ga0495629_0429197
250 Ga0495641_0038734
251 Ga0495653_0033576
252 Ga0495606_0000586
253 Ga0495608_0000007
254 Ga0495610_0050207
255 Ga0495628_0139949
256 Ga0495628_0275215
257 Ga0495628_0288270
258 Ga0495630_0000075
259 Ga0495630_0000176
260 Ga0495630_0006550
261 Ga0495652_0167752
262 Ga0495667_0000020
263 Ga0495635_0000076
264 Ga0495635_0016189
265 Ga0495588_0000187
266 Ga0495657_0000001
267 Ga0495657_0009230
268 Ga0495647_0000081
269 Ga0495658_0002140
270 Ga0495658_0457964
271 Ga0495613_0000041
272 Ga0495624_0000027
273 Ga0495600_0001753
274 Ga0495600_0083354
275 Ga0495676_0000805
276 Ga0495680_0015596
277 Ga0495680_0086739
278 Ga0495675_0000055
279 Ga0495684_0173668
280 Ga0495593_0097469
281 Ga0496100_0000001
282 Ga0496101_0000004
283 Ga0496104_0000387
284 Ga0496104_0068705
285 Ga0496105_0001994
286 Ga0496105_0178690
287 Ga0496106_0000076
288 Ga0496106_0000461
289 Ga0496107_0000005
290 Ga0496108_0001157
291 Ga0496108_0111703
292 Ga0496109_0000261
293 Ga0496111_0142941
294 Ga0496113_0000027
295 Ga0496115_0030357
296 Ga0496119_0287538
297 Ga0496124_0226031
298 Ga0501042_0089160
299 Ga0501075_0043668
300 Ga0501076_0225009
301 Ga0501045_0050277
302 nmdc:mga0yw44_508849_c1
303 nmdc:mga0qj67_245893_c1
304 Ga0495601_0000043
305 Ga0495601_0000535
306 Ga0495601_0027536
307 Ga0495612_0007813
308 Ga0495595_0000002
309 Ga0495595_0152410
310 Ga0495619_0000494
311 Ga0495619_0000827
312 Ga0500566_0013791
313 Ga0500641_0006256
314 Ga0501084_0052600
315 Ga0501082_0146026
316 Ga0530510_0009983

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00160

Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

62

216

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xyh-assembly1.cif.gz_A crystal structure of recombinant human cyclophilin j 0.9272 43 195
5xjc-assembly1.cif.gz_S cryo-em structure of the human spliceosome just prior to exon ligation at 3.6 angstrom 0.9261 40 191
2qer-assembly1.cif.gz_A crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 in the presence of dipeptide ala-pro 0.9256 43 195
7abi-assembly1.cif.gz_t human pre-bact-2 spliceosome 0.925 43 195
1zkc-assembly2.cif.gz_B crystal structure of the cyclophiln_ring domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 0.9246 38 195
ID Description Score Start End Superfamily
af_A0A0R4J2Z8_2_164_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9294 39 193 2.40.100.10
1xyhA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9272 43 195 2.40.100.10
af_P52012_262_474_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9248 38 193 2.40.100.10
af_I1MI74_1_173_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9174 43 190 2.40.100.10
af_Q2FZU9_3_197_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.904 39 193 2.40.100.10
ID Description Score Start End GO Terms
AF-A0A537YPD5-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9924 16 195 GO:0016020
GO:0140839
GO:0140840
AF-A0A537XJ29-F1-model_v4 peptidylprolyl isomerase (EC 5.2.1.8) 0.9886 47 195 GO:0003755
AF-A0A538C9F6-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.981 36 193 GO:0140839
GO:0140840
AF-A0A1Q7UEB9-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9765 35 193 GO:0006457
GO:0140839
GO:0140840
AF-A0A538A7Z8-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9733 16 195 GO:0006457
GO:0140839
GO:0140840

Map