F229773

General Info

Members Datasets Scaffolds Average Seq Length
158 125 316 129

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10263834|Ga0213876_102638342
Length 142
Sequence LATGFRRVPTTLPRMATAPVTTPVSFTEEELAAVTFDSSGLVAAIVQEESTGEILMFAWMNRESLRKTLETGRTWFWSRSRQELWCKGESSGDRQYVRRAAYDCDMDALLFVVEQEGRGACHTGERSCFFREFGGGATPGAV

Samples

Sample ID Description Type Environment
1 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
9 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
32 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
60 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
66 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
67 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
72 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
73 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
74 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
75 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
76 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
77 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
78 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
79 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
87 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
109 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
110 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
111 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
112 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
113 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
114 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
118 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
119 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
120 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
121 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
122 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.37
Metatranscriptomes 0.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.39
Nodule 0
Rhizoplane 7.59
Rhizosphere 76.58
Stem 0
Stem Tuber 0
Unclassified 1.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213876_10263834 3300021384 Bacteria 915
2 Ga0070668_100683805 3300005347 Bacteria 904
3 Ga0070675_101125535 3300005354 Bacteria 722
4 Ga0070708_100018199 3300005445 Bacteria 5878
5 Ga0070708_100027679 3300005445 Bacteria 4867
6 Ga0070706_100501834 3300005467 Bacteria 1129
7 Ga0070707_100195909 3300005468 Bacteria 1970
8 Ga0070684_100161296 3300005535 Bacteria 2034
9 Ga0070697_101316452 3300005536 Bacteria 644
10 Ga0070697_101451916 3300005536 Bacteria 613
11 Ga0070695_101821557 3300005545 Bacteria 511
12 Ga0070665_100345426 3300005548 Bacteria 1493
13 Ga0070704_100138873 3300005549 Bacteria 1895
14 Ga0068855_100905187 3300005563 Bacteria 932
15 Ga0075365_10035410 3300006038 Bacteria 3229
16 Ga0075364_10023784 3300006051 Bacteria 3882
17 Ga0070712_100037661 3300006175 Bacteria 3299
18 Ga0070712_100105160 3300006175 Bacteria 2096
19 Ga0075362_10153207 3300006177 Bacteria 1107
20 Ga0075367_10209007 3300006178 Bacteria 1220
21 Ga0075367_10382174 3300006178 Bacteria 890
22 Ga0075370_10464880 3300006353 Bacteria 762
23 Ga0075370_10741489 3300006353 Bacteria 598
24 Ga0075428_100121588 3300006844 Bacteria 2843
25 Ga0075434_100267481 3300006871 Unclassified 1729
26 Ga0075434_100545559 3300006871 Bacteria 1179
27 Ga0075436_100516279 3300006914 Bacteria 875
28 Ga0111539_12161019 3300009094 Bacteria 646
29 Ga0111539_12981490 3300009094 Bacteria 547
30 Ga0105245_10019814 3300009098 Bacteria 5896
31 Ga0105245_11652867 3300009098 Bacteria 692
32 Ga0105247_10669880 3300009101 Bacteria 777
33 Ga0105243_13024227 3300009148 Bacteria 510
34 Ga0105241_11880213 3300009174 Bacteria 586
35 Ga0105237_10239039 3300009545 Bacteria 1817
36 Ga0105249_10950829 3300009553 Bacteria 927
37 Ga0163162_11749750 3300013306 Bacteria 710
38 Ga0163162_13186178 3300013306 Bacteria 526
39 Ga0157379_10496277 3300014968 Bacteria 1131
40 Ga0157379_12114057 3300014968 Bacteria 558
41 Ga0157376_10808796 3300014969 Bacteria 950
42 Ga0213876_10030203 3300021384 Bacteria 2858
43 Ga0213876_10524674 3300021384 Bacteria 630
44 Ga0224712_10135152 3300022467 Bacteria 1080
45 Ga0207692_10404231 3300025898 Bacteria 852
46 Ga0207684_10169878 3300025910 Bacteria 1880
47 Ga0207707_10045400 3300025912 Bacteria 3829
48 Ga0207695_10633510 3300025913 Bacteria 950
49 Ga0207693_10026682 3300025915 Bacteria 4571
50 Ga0207693_10305076 3300025915 Bacteria 1247
51 Ga0207687_10256404 3300025927 Bacteria 1393
52 Ga0207709_10799654 3300025935 Bacteria 761
53 Ga0207669_10062670 3300025937 Bacteria 2292
54 Ga0207665_10049883 3300025939 Bacteria 2814
55 Ga0207667_10639360 3300025949 Bacteria 1070
56 Ga0207712_10778404 3300025961 Bacteria 840
57 Ga0207648_11297680 3300026089 Bacteria 684
58 Ga0265326_10095770 3300028558 Bacteria 842
59 Ga0265338_10078897 3300028800 Bacteria 2774
60 Ga0265327_10035390 3300031251 Bacteria 2761
61 Ga0265314_10159040 3300031711 Bacteria 1377
62 Ga0265314_10217574 3300031711 Bacteria 1117
63 Ga0307406_10449519 3300031901 Bacteria 1033
64 Ga0307409_100159101 3300031995 Bacteria 1973
65 Ga0307416_101100708 3300032002 Bacteria 899
66 Ga0307411_10381988 3300032005 Bacteria 1159
67 Ga0307415_100324189 3300032126 Bacteria 1286
68 Ga0307415_100874429 3300032126 Bacteria 826
69 Ga0373946_0141785 3300035171 Bacteria 1115
70 Ga0373947_0151117 3300035725 Bacteria 1496
71 Ga0373937_1312315 3300036401 Bacteria 672
72 Ga0395899_0765306 3300037312 Bacteria 600
73 Ga0436365_0893290 3300039437 Bacteria 2519
74 Ga0436365_1159422 3300039437 Bacteria 2256
75 Ga0436365_1671870 3300039437 Bacteria 630
76 Ga0436365_1922914 3300039437 Bacteria 1838
77 Ga0436362_1227845 3300039453 Bacteria 529
78 Ga0439466_0098022 3300041411 Bacteria 916
79 Ga0466966_0016143 3300044684 Bacteria 4936
80 Ga0466966_0648020 3300044684 Bacteria 636
81 Ga0466961_0307944 3300044693 Bacteria 967
82 Ga0466959_0315314 3300045049 Bacteria 1070
83 Ga0451576_1513632 3300045051 Bacteria 697
84 Ga0495629_0116158 3300046459 Bacteria 1865
85 Ga0495653_0929027 3300046463 Bacteria 517
86 Ga0495580_0323167 3300046472 Bacteria 1049
87 Ga0495618_0621896 3300046514 Bacteria 641
88 Ga0495628_0501700 3300046516 Unclassified 876
89 Ga0495630_0421495 3300046517 Bacteria 1023
90 Ga0495652_0290910 3300046529 Bacteria 1192
91 Ga0495640_0183980 3300046533 Bacteria 1331
92 Ga0495635_0379092 3300046663 Bacteria 941
93 Ga0495613_0330461 3300046689 Bacteria 1051
94 Ga0495672_0036562 3300047320 Bacteria 3014
95 Ga0495676_0350405 3300047321 Bacteria 987
96 Ga0495676_0507474 3300047321 Bacteria 791
97 Ga0495680_0626909 3300047322 Bacteria 717
98 Ga0495684_1012886 3300047471 Bacteria 527
99 Ga0496100_0011054 3300048903 Bacteria 5123
100 Ga0496102_0018207 3300048905 Bacteria 6166
101 Ga0496102_0228380 3300048905 Bacteria 1755
102 Ga0496103_0119358 3300048906 Bacteria 1679
103 Ga0496108_0092181 3300048911 Bacteria 2576
104 Ga0496109_0311641 3300048912 Bacteria 1485
105 Ga0496110_0260001 3300048913 Bacteria 1580
106 Ga0496110_0782537 3300048913 Bacteria 858
107 Ga0496112_0251073 3300048915 Bacteria 1720
108 Ga0496114_0104660 3300048917 Bacteria 2420
109 Ga0496115_0047545 3300048918 Bacteria 3431
110 Ga0496115_0386722 3300048918 Bacteria 1137
111 Ga0501031_0518093 3300049568 Bacteria 769
112 Ga0501031_1024252 3300049568 Bacteria 527
113 Ga0501032_0104409 3300049569 Bacteria 1877
114 Ga0501033_0112177 3300049570 Bacteria 1984
115 Ga0501034_0612442 3300049571 Bacteria 993
116 Ga0501036_0947805 3300049572 Bacteria 705
117 Ga0501037_0004464 3300049573 Bacteria 10164
118 Ga0501038_0061117 3300049574 Bacteria 3223
119 Ga0501043_0145106 3300049579 Bacteria 1859
120 Ga0501046_0303007 3300049580 Bacteria 1167
121 Ga0501047_0581769 3300049581 Bacteria 942
122 Ga0501047_1017584 3300049581 Bacteria 642
123 Ga0501048_0169786 3300049582 Bacteria 1545
124 Ga0501068_0022864 3300049584 Bacteria 3660
125 Ga0501068_0175053 3300049584 Bacteria 1355
126 Ga0501070_0041573 3300049586 Bacteria 3829
127 Ga0501071_0560559 3300049587 Bacteria 878
128 Ga0501073_0598165 3300049589 Bacteria 762
129 Ga0501074_0152877 3300049590 Bacteria 1649
130 Ga0501080_0025366 3300049742 Bacteria 5501
131 Ga0501080_1050158 3300049742 Bacteria 705
132 Ga0501083_0446135 3300049744 Bacteria 842
133 Ga0501035_0192412 3300049822 Bacteria 1753
134 Ga0501044_0011816 3300049823 Bacteria 9460
135 Ga0501045_0097184 3300049824 Bacteria 2179
136 nmdc:mga03n38_84927_c1 3300050490 Bacteria 1495
137 nmdc:mga00v17_26855_c1 3300050491 Bacteria 3358
138 nmdc:mga0yw44_28430_c1 3300050492 Bacteria 3215
139 nmdc:mga0yw44_295808_c1 3300050492 Bacteria 1084
140 nmdc:mga06z11_177937_c1 3300050494 Bacteria 1225
141 nmdc:mga06z11_457862_c1 3300050494 Bacteria 771
142 nmdc:mga06z11_735102_c1 3300050494 Bacteria 601
143 nmdc:mga04h51_340264_c1 3300050495 Bacteria 618
144 nmdc:mga07m45_771392_c1 3300050496 Bacteria 552
145 nmdc:mga0n895_135897_c1 3300050512 Bacteria 2485
146 nmdc:mga0n895_696961_c1 3300050512 Bacteria 1012
147 nmdc:mga0rr50_410962_c1 3300050513 Bacteria 1144
148 nmdc:mga08x19_339491_c1 3300050514 Bacteria 1047
149 nmdc:mga08x19_453705_c1 3300050514 Bacteria 902
150 nmdc:mga08x19_644792_c1 3300050514 Bacteria 751
151 Ga0495601_0300736 3300053077 Bacteria 1045
152 Ga0495612_0061322 3300053078 Bacteria 1558
153 Ga0495595_0120103 3300053084 Bacteria 1280
154 Ga0500568_0000081 3300053139 Bacteria 92418
155 Ga0500616_0018660 3300053153 Bacteria 3919
156 Ga0501084_1656330 3300054114 Bacteria 535
157 Ga0501082_0650008 3300060353 Bacteria 923
158 Ga0466962_0122280 3300061719 Bacteria 1256
159 Ga0213876_10263834
160 Ga0070668_100683805
161 Ga0070675_101125535
162 Ga0070708_100018199
163 Ga0070708_100027679
164 Ga0070706_100501834
165 Ga0070707_100195909
166 Ga0070684_100161296
167 Ga0070697_101316452
168 Ga0070697_101451916
169 Ga0070695_101821557
170 Ga0070665_100345426
171 Ga0070704_100138873
172 Ga0068855_100905187
173 Ga0075365_10035410
174 Ga0075364_10023784
175 Ga0070712_100037661
176 Ga0070712_100105160
177 Ga0075362_10153207
178 Ga0075367_10209007
179 Ga0075367_10382174
180 Ga0075370_10464880
181 Ga0075370_10741489
182 Ga0075428_100121588
183 Ga0075434_100267481
184 Ga0075434_100545559
185 Ga0075436_100516279
186 Ga0111539_12161019
187 Ga0111539_12981490
188 Ga0105245_10019814
189 Ga0105245_11652867
190 Ga0105247_10669880
191 Ga0105243_13024227
192 Ga0105241_11880213
193 Ga0105237_10239039
194 Ga0105249_10950829
195 Ga0163162_11749750
196 Ga0163162_13186178
197 Ga0157379_10496277
198 Ga0157379_12114057
199 Ga0157376_10808796
200 Ga0213876_10030203
201 Ga0213876_10524674
202 Ga0224712_10135152
203 Ga0207692_10404231
204 Ga0207684_10169878
205 Ga0207707_10045400
206 Ga0207695_10633510
207 Ga0207693_10026682
208 Ga0207693_10305076
209 Ga0207687_10256404
210 Ga0207709_10799654
211 Ga0207669_10062670
212 Ga0207665_10049883
213 Ga0207667_10639360
214 Ga0207712_10778404
215 Ga0207648_11297680
216 Ga0265326_10095770
217 Ga0265338_10078897
218 Ga0265327_10035390
219 Ga0265314_10159040
220 Ga0265314_10217574
221 Ga0307406_10449519
222 Ga0307409_100159101
223 Ga0307416_101100708
224 Ga0307411_10381988
225 Ga0307415_100324189
226 Ga0307415_100874429
227 Ga0373946_0141785
228 Ga0373947_0151117
229 Ga0373937_1312315
230 Ga0395899_0765306
231 Ga0436365_0893290
232 Ga0436365_1159422
233 Ga0436365_1671870
234 Ga0436365_1922914
235 Ga0436362_1227845
236 Ga0439466_0098022
237 Ga0466966_0016143
238 Ga0466966_0648020
239 Ga0466961_0307944
240 Ga0466959_0315314
241 Ga0451576_1513632
242 Ga0495629_0116158
243 Ga0495653_0929027
244 Ga0495580_0323167
245 Ga0495618_0621896
246 Ga0495628_0501700
247 Ga0495630_0421495
248 Ga0495652_0290910
249 Ga0495640_0183980
250 Ga0495635_0379092
251 Ga0495613_0330461
252 Ga0495672_0036562
253 Ga0495676_0350405
254 Ga0495676_0507474
255 Ga0495680_0626909
256 Ga0495684_1012886
257 Ga0496100_0011054
258 Ga0496102_0018207
259 Ga0496102_0228380
260 Ga0496103_0119358
261 Ga0496108_0092181
262 Ga0496109_0311641
263 Ga0496110_0260001
264 Ga0496110_0782537
265 Ga0496112_0251073
266 Ga0496114_0104660
267 Ga0496115_0047545
268 Ga0496115_0386722
269 Ga0501031_0518093
270 Ga0501031_1024252
271 Ga0501032_0104409
272 Ga0501033_0112177
273 Ga0501034_0612442
274 Ga0501036_0947805
275 Ga0501037_0004464
276 Ga0501038_0061117
277 Ga0501043_0145106
278 Ga0501046_0303007
279 Ga0501047_0581769
280 Ga0501047_1017584
281 Ga0501048_0169786
282 Ga0501068_0022864
283 Ga0501068_0175053
284 Ga0501070_0041573
285 Ga0501071_0560559
286 Ga0501073_0598165
287 Ga0501074_0152877
288 Ga0501080_0025366
289 Ga0501080_1050158
290 Ga0501083_0446135
291 Ga0501035_0192412
292 Ga0501044_0011816
293 Ga0501045_0097184
294 nmdc:mga03n38_84927_c1
295 nmdc:mga00v17_26855_c1
296 nmdc:mga0yw44_28430_c1
297 nmdc:mga0yw44_295808_c1
298 nmdc:mga06z11_177937_c1
299 nmdc:mga06z11_457862_c1
300 nmdc:mga06z11_735102_c1
301 nmdc:mga04h51_340264_c1
302 nmdc:mga07m45_771392_c1
303 nmdc:mga0n895_135897_c1
304 nmdc:mga0n895_696961_c1
305 nmdc:mga0rr50_410962_c1
306 nmdc:mga08x19_339491_c1
307 nmdc:mga08x19_453705_c1
308 nmdc:mga08x19_644792_c1
309 Ga0495601_0300736
310 Ga0495612_0061322
311 Ga0495595_0120103
312 Ga0500568_0000081
313 Ga0500616_0018660
314 Ga0501084_1656330
315 Ga0501082_0650008
316 Ga0466962_0122280

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01502

PRA-CH

Phosphoribosyl-AMP cyclohydrolase

56

130

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bgn-assembly3.cif.gz_F crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway 0.9127 14 118
7bgn-assembly1.cif.gz_B crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway 0.912 14 117
7bgn-assembly2.cif.gz_C crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway 0.9105 14 117
7bgn-assembly3.cif.gz_E crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway 0.9096 14 120
7bgn-assembly2.cif.gz_D crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway 0.9065 14 117
ID Description Score Start End Superfamily
af_C6TGF5_46_140_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.9282 14 105 3.10.20.810
1zpsA01 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.9174 26 106 3.10.20.810
af_C6TGF5_46_140_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.8912 14 105 3.10.20.810
af_O59667_194_289_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.8727 16 106 3.10.20.810
af_P9WMM7_1_97_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.8651 4 106 3.10.20.810
ID Description Score Start End GO Terms
AF-A0A6B1EFR4-F1-model_v4 Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19) 0.9245 1 118 GO:0000105
GO:0000287
GO:0004635
GO:0005737
GO:0008270
AF-A0A0J0V0J3-F1-model_v4 Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19) 0.9238 1 119 GO:0000105
GO:0000287
GO:0004635
GO:0005737
GO:0008270
AF-A0A0G3V168-F1-model_v4 Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19) 0.9235 4 127 GO:0000105
GO:0000287
GO:0004635
GO:0005737
GO:0008270
AF-A0A6L6DW35-F1-model_v4 Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19) 0.9225 9 119 GO:0000105
GO:0000287
GO:0004635
GO:0005737
GO:0008270
AF-A0A6J6ZZZ6-F1-model_v4 Histidine biosynthesis bifunctional protein HisIE (EC 3.5.4.19) 0.922 1 119 GO:0000105
GO:0004635
GO:0005737

Map