F229285

General Info

Members Datasets Scaffolds Average Seq Length
158 113 316 622

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100012702|Ga0068861_1000127022
Length 681
Sequence VPTANPQSIAVGNCFGIPRAGSSLHSFGSLLTSNSIRRNLFWVPTALLVLLWFGLVNASPRVAGNQPAAKNLNHRQDNAPSVIKVEPPSWWAKHTINPVRLLVRGKNLQGARVRSSNPSLQTSAVLVNRSGTYLFVNVSINQGVRPGSYPLTLVTATGTATIPFTIEEPLKTNTHFQGITTADVIYLIMPDRFADGDQSNNIPPGAPPAATDRKNSRAYHGGDLRGVINRLPYLKELGVTALWLTPWYDNWNGVNQCDKPWCPNTYYHGYHAVDYYAVEDHFGDMTTLRELVEKAHGLGIKIIQDQVANHVGSQHPWVKDPPLDNWFHGTLAQHSLNKFRNSSLLSPHANQAEVRNTLDGWFSDDLPDMNQEEPEVARYEIQNSLWWLGMTGLDGVRQDTIQYMPRFFIRDLSNALQRQYPRMWMVGEVFERDAAQTAYFIGGRVGWDGIDTKLDSVFDFASWNTSLLVFTNKSPMRALRDQLKYDALYPDPQKITNLANNHDTTRFMSLDDATMEGAMMHVAYTLSLRGTPQIYYGEEIAMEGKGDPDNRRDFPGGFPGDTRNAFTSAGRTTREQKMFEWTRAWIRLRAEHPALRQGRLIDLFYDDDAYVFAREIQTETVIVAFNRDGAEKKLTLPLDAMGFRDGAELSPLIGTSVRSRVANGQAILNIPPKTAVVYIAR

Samples

Sample ID Description Type Environment
1 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
94 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
95 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
96 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
100 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
101 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
102 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
103 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
104 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
105 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
106 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
107 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.27
Rhizosphere 96.2
Stem 0
Stem Tuber 0
Unclassified 15.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068861_100012702 3300005719 Bacteria 5877
2 CNAas_1000280 3300000532 Bacteria 4902
3 LJQas_1000004 3300000549 Bacteria 34891
4 JGI25406J46586_10000597 3300003203 Bacteria 17002
5 Ga0065704_10078584 3300005289 Bacteria 4388
6 Ga0065712_10000119 3300005290 Bacteria 137052
7 Ga0065712_10003473 3300005290 Bacteria 6677
8 Ga0065715_10006462 3300005293 Bacteria 3378
9 Ga0065715_10094794 3300005293 Unclassified 4240
10 Ga0065707_10089395 3300005295 Bacteria 4377
11 Ga0070670_100000071 3300005331 Bacteria 102454
12 Ga0070670_100035667 3300005331 Bacteria 4281
13 Ga0068869_100034131 3300005334 Bacteria 3597
14 Ga0070680_100002058 3300005336 Bacteria 14834
15 Ga0070682_100000145 3300005337 Bacteria 56593
16 Ga0070682_100028500 3300005337 Unclassified 3359
17 Ga0070689_100055225 3300005340 Unclassified 3077
18 Ga0070669_100000581 3300005353 Bacteria 27178
19 Ga0070703_10004911 3300005406 Bacteria 3733
20 Ga0070705_100009823 3300005440 Unclassified 4771
21 Ga0070700_100000099 3300005441 Bacteria 56217
22 Ga0070700_100006235 3300005441 Bacteria 6360
23 Ga0070700_100034568 3300005441 Bacteria 3053
24 Ga0070694_100007544 3300005444 Bacteria 6640
25 Ga0070694_100042266 3300005444 Bacteria 3044
26 Ga0070694_100043754 3300005444 Bacteria 2995
27 Ga0070694_100096043 3300005444 Bacteria 2088
28 Ga0070708_100000228 3300005445 Bacteria 41976
29 Ga0070681_10000048 3300005458 Bacteria 82548
30 Ga0070706_100000015 3300005467 Bacteria 188425
31 Ga0070698_100004135 3300005471 Bacteria 15960
32 Ga0070699_100001285 3300005518 Bacteria 23135
33 Ga0070699_100007646 3300005518 Bacteria 9396
34 Ga0070679_100000079 3300005530 Bacteria 72586
35 Ga0070697_100000366 3300005536 Bacteria 35335
36 Ga0070697_100016692 3300005536 Bacteria 5775
37 Ga0070672_100065755 3300005543 Bacteria 2869
38 Ga0070686_100022045 3300005544 Unclassified 3791
39 Ga0070696_100010270 3300005546 Bacteria 6266
40 Ga0070696_100026045 3300005546 Bacteria 3978
41 Ga0070693_100023174 3300005547 Bacteria 3314
42 Ga0070665_100061461 3300005548 Bacteria 3766
43 Ga0068854_100099776 3300005578 Bacteria 2175
44 Ga0068856_100049251 3300005614 Bacteria 4152
45 Ga0070702_100018594 3300005615 Unclassified 3607
46 Ga0068859_100003360 3300005617 Bacteria 16279
47 Ga0068859_100012969 3300005617 Bacteria 8374
48 Ga0068859_100060020 3300005617 Bacteria 3832
49 Ga0068859_100066684 3300005617 Bacteria 3634
50 Ga0068859_100078542 3300005617 Bacteria 3341
51 Ga0068861_100011619 3300005719 Bacteria 6125
52 Ga0068851_10004948 3300005834 Bacteria 6034
53 Ga0068863_100089546 3300005841 Bacteria 2918
54 Ga0068858_100089482 3300005842 Bacteria 2864
55 Ga0068862_100048054 3300005844 Bacteria 3642
56 Ga0068862_100094279 3300005844 Unclassified 2611
57 Ga0081539_10001369 3300005985 Bacteria 42259
58 Ga0097621_100006197 3300006237 Bacteria 8480
59 Ga0068871_100003645 3300006358 Bacteria 10581
60 Ga0075433_10024516 3300006852 Bacteria 5092
61 Ga0075436_100000006 3300006914 Bacteria 306066
62 Ga0097620_100003361 3300006931 Bacteria 16279
63 Ga0097620_100012969 3300006931 Bacteria 8374
64 Ga0097620_100060019 3300006931 Bacteria 3832
65 Ga0097620_100066684 3300006931 Bacteria 3634
66 Ga0097620_100078539 3300006931 Bacteria 3341
67 Ga0075435_100002065 3300007076 Bacteria 13165
68 Ga0105240_10070845 3300009093 Bacteria 4312
69 Ga0111539_10005719 3300009094 Bacteria 16078
70 Ga0105247_10007545 3300009101 Bacteria 6663
71 Ga0105247_10032821 3300009101 Unclassified 3155
72 Ga0105247_10068302 3300009101 Unclassified 2216
73 Ga0114129_10022996 3300009147 Bacteria 8843
74 Ga0114129_10067313 3300009147 Unclassified 4995
75 Ga0114129_10256078 3300009147 Unclassified 2348
76 Ga0114129_10298299 3300009147 Unclassified 2149
77 Ga0105243_10002355 3300009148 Bacteria 15818
78 Ga0105248_10027714 3300009177 Bacteria 6308
79 Ga0105248_10092179 3300009177 Bacteria 3412
80 Ga0105237_10000649 3300009545 Bacteria 48499
81 Ga0105249_10005471 3300009553 Bacteria 10966
82 Ga0105249_10034556 3300009553 Unclassified 4583
83 Ga0105239_10070643 3300010375 Bacteria 3836
84 Ga0157373_10001084 3300013100 Bacteria 20972
85 Ga0157378_10046713 3300013297 Bacteria 3848
86 Ga0157375_10189921 3300013308 Bacteria 2209
87 Ga0163163_10000696 3300014325 Bacteria 28562
88 Ga0163163_10037619 3300014325 Bacteria 4709
89 Ga0157380_10000250 3300014326 Bacteria 32403
90 Ga0157380_10004970 3300014326 Bacteria 9264
91 Ga0157380_10020456 3300014326 Unclassified 4947
92 Ga0157377_10099748 3300014745 Bacteria 1728
93 Ga0213876_10000031 3300021384 Bacteria 213087
94 Ga0213876_10000295 3300021384 Bacteria 45211
95 Ga0207656_10012305 3300025321 Bacteria 3251
96 Ga0207653_10002043 3300025885 Bacteria 6434
97 Ga0207710_10004302 3300025900 Bacteria 6233
98 Ga0207684_10000083 3300025910 Bacteria 176092
99 Ga0207684_10004609 3300025910 Bacteria 12942
100 Ga0207707_10000015 3300025912 Bacteria 259670
101 Ga0207671_10037843 3300025914 Bacteria 3577
102 Ga0207660_10005504 3300025917 Bacteria 8226
103 Ga0207652_10002603 3300025921 Bacteria 15145
104 Ga0207646_10006528 3300025922 Bacteria 12041
105 Ga0207681_10001163 3300025923 Bacteria 16986
106 Ga0207681_10010896 3300025923 Bacteria 5584
107 Ga0207681_10011061 3300025923 Bacteria 5542
108 Ga0207694_10014713 3300025924 Bacteria 5899
109 Ga0207650_10000006 3300025925 Bacteria 544730
110 Ga0207644_10020558 3300025931 Unclassified 4489
111 Ga0207665_10027243 3300025939 Bacteria 3776
112 Ga0207711_10025057 3300025941 Bacteria 5004
113 Ga0207711_10056286 3300025941 Unclassified 3379
114 Ga0207689_10043657 3300025942 Bacteria 3706
115 Ga0207640_10060320 3300025981 Bacteria 2507
116 Ga0207708_10000037 3300026075 Bacteria 137489
117 Ga0207708_10005260 3300026075 Bacteria 9529
118 Ga0207641_10076583 3300026088 Unclassified 2892
119 Ga0207676_10001850 3300026095 Bacteria 15489
120 Ga0207676_10117779 3300026095 Unclassified 2234
121 Ga0207674_10039976 3300026116 Bacteria 4860
122 Ga0207675_100009026 3300026118 Bacteria 9354
123 Ga0207675_100028325 3300026118 Bacteria 5216
124 Ga0207675_100055755 3300026118 Bacteria 3688
125 Ga0207675_100078206 3300026118 Unclassified 3099
126 Ga0207428_10003354 3300027907 Bacteria 15564
127 Ga0268265_10019928 3300028380 Unclassified 4672
128 Ga0268265_10056644 3300028380 Bacteria 2983
129 Ga0268264_10022404 3300028381 Bacteria 5159
130 Ga0307405_10008625 3300031731 Bacteria 5180
131 Ga0307407_10023612 3300031903 Unclassified 3211
132 Ga0307415_100022045 3300032126 Bacteria 3925
133 Ga0373951_0003742 3300035091 Bacteria 3669
134 Ga0395900_0001406 3300037418 Bacteria 28805
135 Ga0436365_0882969 3300039437 Bacteria 184313
136 Ga0436365_1601972 3300039437 Bacteria 65837
137 Ga0495663_0000699 3300046525 Bacteria 11530
138 Ga0495598_0000152 3300046537 Bacteria 11830
139 Ga0495621_0000280 3300046539 Bacteria 12303
140 Ga0495672_0000500 3300047320 Bacteria 45343
141 Ga0496102_0036221 3300048905 Bacteria 4445
142 Ga0496112_0196653 3300048915 Bacteria 1977
143 Ga0501292_001951 3300049515 Bacteria 2604
144 Ga0501296_000420 3300049519 Bacteria 4154
145 Ga0501202_000857 3300049652 Unclassified 4619
146 Ga0501202_005996 3300049652 Bacteria 2163
147 Ga0501217_006135 3300049661 Unclassified 2541
148 Ga0501224_004523 3300049664 Bacteria 1976
149 Ga0501235_008516 3300049669 Unclassified 2239
150 Ga0501249_009501 3300049679 Unclassified 2024
151 Ga0501225_0000940 3300049705 Bacteria 9087
152 Ga0501273_001054 3300049770 Bacteria 2496
153 nmdc:mga05p37_94315_c1 3300050507 Bacteria 3688
154 nmdc:mga08y16_60958_c1 3300050511 Bacteria 3939
155 nmdc:mga0n895_140358_c1 3300050512 Bacteria 2444
156 nmdc:mga0rr50_697_c1 3300050513 Bacteria 18007
157 nmdc:mga08x19_13_c1 3300050514 Bacteria 366166
158 nmdc:mga0a205_140500_c1 3300050515 Bacteria 2315
159 Ga0068861_100012702
160 CNAas_1000280
161 LJQas_1000004
162 JGI25406J46586_10000597
163 Ga0065704_10078584
164 Ga0065712_10000119
165 Ga0065712_10003473
166 Ga0065715_10006462
167 Ga0065715_10094794
168 Ga0065707_10089395
169 Ga0070670_100000071
170 Ga0070670_100035667
171 Ga0068869_100034131
172 Ga0070680_100002058
173 Ga0070682_100000145
174 Ga0070682_100028500
175 Ga0070689_100055225
176 Ga0070669_100000581
177 Ga0070703_10004911
178 Ga0070705_100009823
179 Ga0070700_100000099
180 Ga0070700_100006235
181 Ga0070700_100034568
182 Ga0070694_100007544
183 Ga0070694_100042266
184 Ga0070694_100043754
185 Ga0070694_100096043
186 Ga0070708_100000228
187 Ga0070681_10000048
188 Ga0070706_100000015
189 Ga0070698_100004135
190 Ga0070699_100001285
191 Ga0070699_100007646
192 Ga0070679_100000079
193 Ga0070697_100000366
194 Ga0070697_100016692
195 Ga0070672_100065755
196 Ga0070686_100022045
197 Ga0070696_100010270
198 Ga0070696_100026045
199 Ga0070693_100023174
200 Ga0070665_100061461
201 Ga0068854_100099776
202 Ga0068856_100049251
203 Ga0070702_100018594
204 Ga0068859_100003360
205 Ga0068859_100012969
206 Ga0068859_100060020
207 Ga0068859_100066684
208 Ga0068859_100078542
209 Ga0068861_100011619
210 Ga0068851_10004948
211 Ga0068863_100089546
212 Ga0068858_100089482
213 Ga0068862_100048054
214 Ga0068862_100094279
215 Ga0081539_10001369
216 Ga0097621_100006197
217 Ga0068871_100003645
218 Ga0075433_10024516
219 Ga0075436_100000006
220 Ga0097620_100003361
221 Ga0097620_100012969
222 Ga0097620_100060019
223 Ga0097620_100066684
224 Ga0097620_100078539
225 Ga0075435_100002065
226 Ga0105240_10070845
227 Ga0111539_10005719
228 Ga0105247_10007545
229 Ga0105247_10032821
230 Ga0105247_10068302
231 Ga0114129_10022996
232 Ga0114129_10067313
233 Ga0114129_10256078
234 Ga0114129_10298299
235 Ga0105243_10002355
236 Ga0105248_10027714
237 Ga0105248_10092179
238 Ga0105237_10000649
239 Ga0105249_10005471
240 Ga0105249_10034556
241 Ga0105239_10070643
242 Ga0157373_10001084
243 Ga0157378_10046713
244 Ga0157375_10189921
245 Ga0163163_10000696
246 Ga0163163_10037619
247 Ga0157380_10000250
248 Ga0157380_10004970
249 Ga0157380_10020456
250 Ga0157377_10099748
251 Ga0213876_10000031
252 Ga0213876_10000295
253 Ga0207656_10012305
254 Ga0207653_10002043
255 Ga0207710_10004302
256 Ga0207684_10000083
257 Ga0207684_10004609
258 Ga0207707_10000015
259 Ga0207671_10037843
260 Ga0207660_10005504
261 Ga0207652_10002603
262 Ga0207646_10006528
263 Ga0207681_10001163
264 Ga0207681_10010896
265 Ga0207681_10011061
266 Ga0207694_10014713
267 Ga0207650_10000006
268 Ga0207644_10020558
269 Ga0207665_10027243
270 Ga0207711_10025057
271 Ga0207711_10056286
272 Ga0207689_10043657
273 Ga0207640_10060320
274 Ga0207708_10000037
275 Ga0207708_10005260
276 Ga0207641_10076583
277 Ga0207676_10001850
278 Ga0207676_10117779
279 Ga0207674_10039976
280 Ga0207675_100009026
281 Ga0207675_100028325
282 Ga0207675_100055755
283 Ga0207675_100078206
284 Ga0207428_10003354
285 Ga0268265_10019928
286 Ga0268265_10056644
287 Ga0268264_10022404
288 Ga0307405_10008625
289 Ga0307407_10023612
290 Ga0307415_100022045
291 Ga0373951_0003742
292 Ga0395900_0001406
293 Ga0436365_0882969
294 Ga0436365_1601972
295 Ga0495663_0000699
296 Ga0495598_0000152
297 Ga0495621_0000280
298 Ga0495672_0000500
299 Ga0496102_0036221
300 Ga0496112_0196653
301 Ga0501292_001951
302 Ga0501296_000420
303 Ga0501202_000857
304 Ga0501202_005996
305 Ga0501217_006135
306 Ga0501224_004523
307 Ga0501235_008516
308 Ga0501249_009501
309 Ga0501225_0000940
310 Ga0501273_001054
311 nmdc:mga05p37_94315_c1
312 nmdc:mga08y16_60958_c1
313 nmdc:mga0n895_140358_c1
314 nmdc:mga0rr50_697_c1
315 nmdc:mga08x19_13_c1
316 nmdc:mga0a205_140500_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09087

Cyc-maltodext_N

Cyclomaltodextrinase, N-terminal

84

168

0.94

PF22026

Alpha-amylase_C_2

Alpha-amylase C-terminal domain

598

678

0.87

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

222

548

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4e2o-assembly1.cif.gz_A crystal structure of alpha-amylase from geobacillus thermoleovorans, gta, complexed with acarbose 0.9186 152 645
5a2c-assembly1.cif.gz_A crystal structure of anoxybacillus alpha-amylase provides insights into a new glycosyl hydrolase subclass 0.9173 152 644
3edf-assembly1.cif.gz_B structural base for cyclodextrin hydrolysis 0.9087 53 645
3ede-assembly1.cif.gz_B structural base for cyclodextrin hydrolysis 0.9083 53 645
1h3g-assembly2.cif.gz_B cyclomaltodextrinase from flavobacterium sp. no. 92: from dna sequence to protein structure 0.9051 53 645
ID Description Score Start End Superfamily
2wc7A02 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9039 556 643 2.60.40.1180
4e2oA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9033 152 555 3.20.20.80
1ji1A03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.8972 556 642 2.60.40.1180
3edeA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8946 148 562 3.20.20.80
4e2oA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8864 152 555 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A2V8NBP4-F1-model_v4 Alpha-amylase 0.9867 248 642 GO:0005975
AF-A0A7V9KM79-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9778 344 643 GO:0005975
AF-A0A7W0G3K6-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9769 394 645 GO:0005975
AF-A0A7W1HEZ2-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9722 286 645 GO:0005975
AF-A0A2V9AYV8-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9709 332 526 GO:0005975

Map