F229266

General Info

Members Datasets Scaffolds Average Seq Length
158 102 155 461

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100001243|Ga0068856_10000124310
Length 472
Sequence MKKAGFEKYLALYLPWMLSLAFQADPVISYFIAWLGSFLIFYLTMSGWVKPLPDDRSVAEQLMRPIFLIQIIFAGYSCCTTIFYFFDVMGYVDFHKSTAFYLVNANKLELTAQCQRYYCLGHAAFATGLIFFMRYPIKKKYYIETERIANLLFAAALISLPLSIVFSRTPGLIQFAFQFNSLSFIAGTLALAFAIPLHKIWNTLICIILYVSNLYQALISGYKEPIIISILVLGIFLYPTYKRLVIVTFIPLLLALFIFLPTYNKIFRQNAWAEDVNAEEASQLALDAAFNKQTASSEGAPESNWDFLAYRLSEIDMFASFVKSTPDRIDFYGTRLLQQSAIAIVPRAFWPDKPITEDLVMERVYDADVVNRGSNVSAKPAFIVDAYLCGGTPTIFLSMLIYGAIAQLISLQAEKLFGGYVLGTALIFSGLFQILWRGLSFEFLINSVFWAYVSMIIIHRIFVATHILKKVS

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
3 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
4 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
9 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
50 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
74 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
75 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
89 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
90 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
91 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
92 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
93 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
94 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
95 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
96 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
97 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
98 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
99 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
100 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
101 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
102 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.47
Metatranscriptomes 0
Isolates 2.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.76
Nodule 0
Rhizoplane 0.63
Rhizosphere 77.22
Stem 0
Stem Tuber 0
Unclassified 11.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10002660 3300001989 Bacteria 6877
2 JGI24739J22299_10002668 3300001989 Bacteria 6871
3 JGI24737J22298_10000094 3300001990 Bacteria 26101
4 JGI24735J21928_10000003 3300002067 Bacteria 385983
5 JGI25162J39368_1003950 3300002737 Bacteria 3794
6 JGI25164J39214_1000727 3300002772 Bacteria 12325
7 JGI25165J46597_1000329 3300003214 Bacteria 56562
8 rootH1_10018616 3300003316 Bacteria 5902
9 rootH1_10023196 3300003316 Bacteria 5733
10 rootH1_10023196 3300003323 Bacteria 10231
11 rootH2_10002321 3300003320 Bacteria 110257
12 rootH2_10063779 3300003320 Bacteria 20382
13 rootH2_10266304 3300003320 Unclassified 3240
14 rootL2_10124699 3300003322 Bacteria 6812
15 rootH1_10170134 3300003323 Bacteria 15889
16 rootH1_10277817 3300003323 Bacteria 4031
17 rootH1_10330989 3300003323 Bacteria 3900
18 Ga0065714_10102464 3300005288 Bacteria 1622
19 Ga0070658_10000301 3300005327 Bacteria 42860
20 Ga0070676_10000362 3300005328 Bacteria 20809
21 Ga0068869_100095671 3300005334 Bacteria 2241
22 Ga0070660_100028987 3300005339 Bacteria 4145
23 Ga0070671_100001776 3300005355 Bacteria 16374
24 Ga0070673_100066837 3300005364 Bacteria 2873
25 Ga0070678_100003311 3300005456 Bacteria 8958
26 Ga0070662_100000273 3300005457 Bacteria 30505
27 Ga0070681_10014205 3300005458 Bacteria 7923
28 Ga0068867_100001115 3300005459 Bacteria 18389
29 Ga0068853_100005336 3300005539 Bacteria 10062
30 Ga0068853_100045210 3300005539 Bacteria 3771
31 Ga0070672_100125041 3300005543 Bacteria 2109
32 Ga0070665_100000010 3300005548 Bacteria 529545
33 Ga0068855_100000098 3300005563 Bacteria 105977
34 Ga0068855_100027365 3300005563 Bacteria 6821
35 Ga0068855_100046014 3300005563 Bacteria 5159
36 Ga0068856_100001243 3300005614 Bacteria 26769
37 Ga0068852_100002461 3300005616 Bacteria 12747
38 Ga0075366_10000492 3300006195 Bacteria 18283
39 Ga0097621_100000011 3300006237 Bacteria 111116
40 Ga0068871_100000323 3300006358 Bacteria 33311
41 Ga0068865_100000128 3300006881 Bacteria 39251
42 Ga0105240_10000044 3300009093 Bacteria 250257
43 Ga0105240_10010258 3300009093 Bacteria 13188
44 Ga0105240_10011030 3300009093 Bacteria 12638
45 Ga0105240_10020984 3300009093 Bacteria 8695
46 Ga0105240_10093289 3300009093 Bacteria 3675
47 Ga0105240_10273200 3300009093 Bacteria 1945
48 Ga0105241_10000504 3300009174 Bacteria 29406
49 Ga0105241_10033364 3300009174 Bacteria 3864
50 Ga0105241_10108560 3300009174 Bacteria 2218
51 Ga0105242_10104114 3300009176 Bacteria 2409
52 Ga0105237_10000247 3300009545 Bacteria 76464
53 Ga0105237_10000456 3300009545 Bacteria 57925
54 Ga0105237_10001378 3300009545 Bacteria 32075
55 Ga0105237_10001487 3300009545 Bacteria 30881
56 Ga0105237_10007244 3300009545 Bacteria 12168
57 Ga0105238_10129090 3300009551 Bacteria 2506
58 Ga0105238_10275277 3300009551 Bacteria 1664
59 Ga0105239_10000015 3300010375 Bacteria 319892
60 Ga0105239_10006988 3300010375 Bacteria 13004
61 Ga0105239_10014678 3300010375 Bacteria 8687
62 Ga0157371_10016958 3300013102 Bacteria 5424
63 Ga0157369_10096760 3300013105 Bacteria 3149
64 Ga0157374_10000643 3300013296 Bacteria 30783
65 Ga0157374_10001351 3300013296 Bacteria 20892
66 Ga0157374_10007568 3300013296 Bacteria 9270
67 Ga0157378_10114705 3300013297 Bacteria 2475
68 Ga0163162_10004758 3300013306 Bacteria 13100
69 Ga0163162_10045575 3300013306 Bacteria 4393
70 Ga0163162_10046629 3300013306 Unclassified 4344
71 Ga0157372_10004998 3300013307 Bacteria 14089
72 Ga0157372_10032409 3300013307 Bacteria 5730
73 Ga0157375_10008900 3300013308 Bacteria 8787
74 Ga0157375_10060673 3300013308 Bacteria 3752
75 Ga0213872_10018071 3300021361 Bacteria 3253
76 Ga0207427_100167 3300025231 Bacteria 73496
77 Ga0209437_100034 3300025233 Bacteria 494007
78 Ga0209233_1000038 3300025261 Bacteria 548972
79 Ga0207647_10000641 3300025904 Bacteria 27308
80 Ga0207645_10001718 3300025907 Bacteria 17779
81 Ga0207705_10000336 3300025909 Bacteria 42484
82 Ga0207705_10147339 3300025909 Bacteria 1762
83 Ga0207654_10026036 3300025911 Bacteria 3163
84 Ga0207654_10089311 3300025911 Bacteria 1874
85 Ga0207695_10000013 3300025913 Bacteria 821265
86 Ga0207695_10006565 3300025913 Bacteria 15056
87 Ga0207695_10015478 3300025913 Bacteria 8976
88 Ga0207695_10042590 3300025913 Bacteria 4846
89 Ga0207695_10116394 3300025913 Bacteria 2647
90 Ga0207671_10000441 3300025914 Bacteria 57099
91 Ga0207671_10000938 3300025914 Bacteria 36375
92 Ga0207671_10024206 3300025914 Bacteria 4569
93 Ga0207657_10062474 3300025919 Bacteria 3188
94 Ga0207657_10178861 3300025919 Bacteria 1715
95 Ga0207644_10002985 3300025931 Bacteria 10883
96 Ga0207706_10000380 3300025933 Bacteria 48389
97 Ga0207704_10000019 3300025938 Bacteria 152734
98 Ga0207667_10000014 3300025949 Bacteria 421261
99 Ga0207667_10211351 3300025949 Bacteria 1989
100 Ga0207639_10017617 3300026041 Bacteria 5065
101 Ga0207702_10016172 3300026078 Bacteria 6178
102 Ga0207648_10000061 3300026089 Bacteria 101034
103 Ga0207683_10004385 3300026121 Bacteria 12193
104 Ga0207698_10035474 3300026142 Bacteria 3649
105 Ga0268266_10000032 3300028379 Bacteria 395079
106 Ga0307517_10084060 3300028786 Unclassified 2683
107 Ga0307515_10000643 3300028794 Bacteria 80674
108 Ga0307515_10004205 3300028794 Bacteria 29953
109 Ga0307515_10056309 3300028794 Bacteria 5718
110 Ga0307509_10139953 3300031507 Bacteria 2358
111 Ga0307507_10000502 3300033179 Bacteria 82354
112 Ga0307510_10013998 3300033180 Bacteria 9496
113 Ga0373941_0001850 3300035115 Bacteria 4566
114 Ga0395900_0000541 3300037418 Bacteria 52877
115 Ga0395900_0004918 3300037418 Bacteria 14068
116 Ga0395900_0047362 3300037418 Bacteria 4426
117 Ga0395900_0085855 3300037418 Bacteria 3234
118 Ga0395905_0000462 3300037471 Bacteria 56533
119 Ga0395905_0000977 3300037471 Bacteria 36694
120 Ga0395901_0025888 3300038443 Bacteria 6025
121 Ga0395901_0064679 3300038443 Bacteria 3807
122 Ga0395901_0224178 3300038443 Bacteria 1964
123 Ga0495638_0066380 3300046460 Bacteria 2218
124 Ga0495650_0000107 3300046471 Bacteria 200864
125 Ga0495585_0000014 3300046492 Bacteria 187513
126 Ga0495585_0005171 3300046492 Bacteria 8282
127 Ga0495606_0000110 3300046507 Bacteria 139007
128 Ga0495606_0085126 3300046507 Bacteria 1956
129 Ga0495610_0009361 3300046512 Bacteria 6199
130 Ga0495648_0050375 3300046524 Bacteria 2545
131 Ga0495633_0000026 3300046558 Bacteria 204722
132 Ga0495668_0000122 3300046616 Bacteria 115217
133 Ga0495668_0028708 3300046616 Bacteria 3146
134 Ga0495625_0000021 3300046660 Bacteria 282133
135 Ga0495625_0000771 3300046660 Bacteria 44564
136 Ga0495625_0001221 3300046660 Bacteria 32622
137 Ga0495625_0022754 3300046660 Bacteria 4798
138 Ga0495661_0034152 3300046665 Bacteria 3201
139 Ga0495649_0000009 3300046694 Bacteria 451725
140 Ga0495660_0038252 3300046810 Bacteria 2668
141 Ga0495687_006261 3300047443 Bacteria 7341
142 Ga0495677_0018332 3300047445 Bacteria 2538
143 Ga0495673_0072230 3300047469 Bacteria 1449
144 Ga0495686_0028828 3300047472 Bacteria 3614
145 Ga0495626_0072890 3300048091 Bacteria 1539
146 nmdc:mga0k408_22_c2 3300050493 Bacteria 93033
147 nmdc:mga0k408_367_c1 3300050493 Bacteria 19252
148 Ga0500608_002014 3300053122 Bacteria 7284
149 Ga0500608_011369 3300053122 Bacteria 3862
150 Ga0500618_000010 3300053125 Bacteria 203909
151 Ga0500618_014091 3300053125 Bacteria 2051
152 Ga0500642_0004644 3300053130 Unclassified 4329
153 Ga0500622_0000509 3300053156 Bacteria 36122
154 Ga0500624_000224 3300053157 Bacteria 20851
155 Ga0500634_0041412 3300053161 Bacteria 2501

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047469 Ga0495673_0072230 Ga0495673_0072230_152_1303 383
2 3300025931 Ga0207644_10002985 Ga0207644_1000298510 401
3 3300021361 Ga0213872_10018071 Ga0213872_100180713 406
4 3300046507 Ga0495606_0085126 Ga0495606_0085126_11_1246 411
5 3300037418 Ga0395900_0085855 Ga0395900_0085855_715_1983 422
6 3300037471 Ga0395905_0000977 Ga0395905_0000977_34203_35471 422
7 3300038443 Ga0395901_0064679 Ga0395901_0064679_2223_3491 422
8 3300009093 Ga0105240_10020984 Ga0105240_100209846 433
9 3300009545 Ga0105237_10007244 Ga0105237_1000724412 433
10 3300010375 Ga0105239_10014678 Ga0105239_100146788 433
11 3300025913 Ga0207695_10015478 Ga0207695_100154788 433
12 3300053122 Ga0500608_002014 Ga0500608_002014_1276_2598 433
13 3300009093 Ga0105240_10273200 Ga0105240_102732002 437
14 3300047443 Ga0495687_006261 Ga0495687_006261_746_2122 442
15 3300003323 rootH1_10170134 rootH1_101701342 443
16 3300025913 Ga0207695_10116394 Ga0207695_101163942 443
17 3300002737 JGI25162J39368_1003950 JGI25162J39368_10039503 444
18 3300003320 rootH2_10266304 rootH2_102663042 444
19 3300025919 Ga0207657_10178861 Ga0207657_101788612 446
20 3300037418 Ga0395900_0000541 Ga0395900_0000541_32149_33564 452
21 3300046507 Ga0495606_0000110 Ga0495606_0000110_98156_99562 452
22 3300003316 rootH1_10018616 rootH1_100186164 457
23 3300009093 Ga0105240_10000044 Ga0105240_10000044123 457
24 3300025913 Ga0207695_10000013 Ga0207695_10000013597 457
25 3300047472 Ga0495686_0028828 Ga0495686_0028828_1706_3121 457
26 3300005328 Ga0070676_10000362 Ga0070676_1000036212 458
27 3300005334 Ga0068869_100095671 Ga0068869_1000956712 458
28 3300005364 Ga0070673_100066837 Ga0070673_1000668373 458
29 3300005456 Ga0070678_100003311 Ga0070678_1000033115 458
30 3300005459 Ga0068867_100001115 Ga0068867_10000111518 458
31 3300005539 Ga0068853_100005336 Ga0068853_10000533612 458
32 3300005543 Ga0070672_100125041 Ga0070672_1001250412 458
33 3300005616 Ga0068852_100002461 Ga0068852_10000246114 458
34 3300006237 Ga0097621_100000011 Ga0097621_10000001186 458
35 3300006358 Ga0068871_100000323 Ga0068871_10000032318 458
36 3300006881 Ga0068865_100000128 Ga0068865_10000012811 458
37 3300009174 Ga0105241_10000504 Ga0105241_100005049 458
38 3300009176 Ga0105242_10104114 Ga0105242_101041142 458
39 3300009545 Ga0105237_10000456 Ga0105237_1000045623 458
40 3300009551 Ga0105238_10129090 Ga0105238_101290902 458
41 3300010375 Ga0105239_10006988 Ga0105239_1000698812 458
42 3300013296 Ga0157374_10000643 Ga0157374_1000064322 458
43 3300013297 Ga0157378_10114705 Ga0157378_101147052 458
44 3300013308 Ga0157375_10060673 Ga0157375_100606733 458
45 3300025907 Ga0207645_10001718 Ga0207645_100017187 458
46 3300025914 Ga0207671_10024206 Ga0207671_100242063 458
47 3300025938 Ga0207704_10000019 Ga0207704_1000001960 458
48 3300026089 Ga0207648_10000061 Ga0207648_1000006133 458
49 3300026121 Ga0207683_10004385 Ga0207683_100043855 458
50 3300026142 Ga0207698_10035474 Ga0207698_100354741 458
51 3300037418 Ga0395900_0004918 Ga0395900_0004918_1927_3327 458
52 3300037471 Ga0395905_0000462 Ga0395905_0000462_4383_5783 458
53 3300038443 Ga0395901_0025888 Ga0395901_0025888_914_2314 458
54 3300005563 Ga0068855_100000098 Ga0068855_10000009840 459
55 3300025949 Ga0207667_10000014 Ga0207667_10000014145 459
56 3300005548 Ga0070665_100000010 Ga0070665_100000010376 460
57 3300009545 Ga0105237_10000247 Ga0105237_1000024724 460
58 3300009545 Ga0105237_10001487 Ga0105237_1000148727 460
59 3300013308 Ga0157375_10008900 Ga0157375_100089006 460
60 3300025914 Ga0207671_10000441 Ga0207671_1000044134 460
61 3300026041 Ga0207639_10017617 Ga0207639_100176172 460
62 3300028379 Ga0268266_10000032 Ga0268266_10000032200 460
63 3300031507 Ga0307509_10139953 Ga0307509_101399532 460
64 3300005355 Ga0070671_100001776 Ga0070671_10000177613 462
65 3300028786 Ga0307517_10084060 Ga0307517_100840602 462
66 3300013306 Ga0163162_10045575 Ga0163162_100455752 464
67 3300002772 JGI25164J39214_1000727 JGI25164J39214_100072711 465
68 3300003214 JGI25165J46597_1000329 JGI25165J46597_100032939 465
69 3300005327 Ga0070658_10000301 Ga0070658_100003017 465
70 3300009093 Ga0105240_10011030 Ga0105240_1001103012 465
71 3300025231 Ga0207427_100167 Ga0207427_10016723 465
72 3300025233 Ga0209437_100034 Ga0209437_100034437 465
73 3300025261 Ga0209233_1000038 Ga0209233_1000038437 465
74 3300025909 Ga0207705_10000336 Ga0207705_1000033636 465
75 3300025913 Ga0207695_10006565 Ga0207695_1000656513 465
76 3300037418 Ga0395900_0047362 Ga0395900_0047362_1252_2649 465
77 3300038443 Ga0395901_0224178 Ga0395901_0224178_431_1828 465
78 iso_pu_bacteria 2599185184 2599479626 465
79 iso_pu_bacteria 2928078545 2928083822 465
80 iso_pu_bacteria 2928147474 2928152263 465
81 iso_pu_bacteria 2932082852 2932084821 465
82 3300005458 Ga0070681_10014205 Ga0070681_100142053 467
83 3300025909 Ga0207705_10147339 Ga0207705_101473391 467
84 3300028794 Ga0307515_10056309 Ga0307515_100563092 467
85 3300003320 rootH2_10063779 rootH2_1006377913 468
86 3300003322 rootL2_10124699 rootL2_101246994 468
87 3300003323 rootH1_10277817 rootH1_102778174 468
88 3300005288 Ga0065714_10102464 Ga0065714_101024641 468
89 3300005339 Ga0070660_100028987 Ga0070660_1000289872 468
90 3300005457 Ga0070662_100000273 Ga0070662_1000002736 468
91 3300005539 Ga0068853_100045210 Ga0068853_1000452103 468
92 3300005563 Ga0068855_100027365 Ga0068855_1000273652 468
93 3300005614 Ga0068856_100001243 Ga0068856_10000124310 468
94 3300006195 Ga0075366_10000492 Ga0075366_1000049218 468
95 3300009174 Ga0105241_10033364 Ga0105241_100333642 468
96 3300009174 Ga0105241_10108560 Ga0105241_101085602 468
97 3300009545 Ga0105237_10001378 Ga0105237_1000137815 468
98 3300013296 Ga0157374_10001351 Ga0157374_100013516 468
99 3300013307 Ga0157372_10032409 Ga0157372_100324092 468
100 3300025911 Ga0207654_10026036 Ga0207654_100260362 468
101 3300025911 Ga0207654_10089311 Ga0207654_100893111 468
102 3300025914 Ga0207671_10000938 Ga0207671_1000093825 468
103 3300025919 Ga0207657_10062474 Ga0207657_100624742 468
104 3300025933 Ga0207706_10000380 Ga0207706_1000038032 468
105 3300026078 Ga0207702_10016172 Ga0207702_100161725 468
106 3300028794 Ga0307515_10000643 Ga0307515_1000064348 468
107 3300028794 Ga0307515_10004205 Ga0307515_1000420515 468
108 3300033179 Ga0307507_10000502 Ga0307507_1000050222 468
109 3300046492 Ga0495585_0005171 Ga0495585_0005171_566_1975 468
110 3300046558 Ga0495633_0000026 Ga0495633_0000026_193201_194610 468
111 3300046616 Ga0495668_0000122 Ga0495668_0000122_63559_64968 468
112 3300046660 Ga0495625_0000771 Ga0495625_0000771_27843_29252 468
113 3300046660 Ga0495625_0001221 Ga0495625_0001221_18831_20240 468
114 3300046660 Ga0495625_0022754 Ga0495625_0022754_1883_3292 468
115 3300047445 Ga0495677_0018332 Ga0495677_0018332_970_2379 468
116 3300048091 Ga0495626_0072890 Ga0495626_0072890_85_1494 468
117 3300050493 nmdc:mga0k408_22_c2 nmdc:mga0k408_22_c2_672_2081 468
118 3300053122 Ga0500608_011369 Ga0500608_011369_2396_3805 468
119 3300053125 Ga0500618_000010 Ga0500618_000010_173682_175091 468
120 3300053156 Ga0500622_0000509 Ga0500622_0000509_7438_8844 468
121 3300053157 Ga0500624_000224 Ga0500624_000224_11696_13102 468
122 3300053161 Ga0500634_0041412 Ga0500634_0041412_674_2080 468
123 3300001989 JGI24739J22299_10002660 JGI24739J22299_100026605 469
124 3300001989 JGI24739J22299_10002668 JGI24739J22299_100026683 469
125 3300001990 JGI24737J22298_10000094 JGI24737J22298_1000009422 469
126 3300002067 JGI24735J21928_10000003 JGI24735J21928_10000003139 469
127 3300003316 rootH1_10023196 rootH1_100231964 469
128 3300003320 rootH2_10002321 rootH2_1000232112 469
129 3300003323 rootH1_10330989 rootH1_103309894 469
130 3300005563 Ga0068855_100046014 Ga0068855_1000460142 469
131 3300009093 Ga0105240_10010258 Ga0105240_100102582 469
132 3300009093 Ga0105240_10093289 Ga0105240_100932891 469
133 3300009551 Ga0105238_10275277 Ga0105238_102752772 469
134 3300010375 Ga0105239_10000015 Ga0105239_10000015272 469
135 3300013102 Ga0157371_10016958 Ga0157371_100169583 469
136 3300013105 Ga0157369_10096760 Ga0157369_100967603 469
137 3300013296 Ga0157374_10007568 Ga0157374_100075682 469
138 3300013306 Ga0163162_10004758 Ga0163162_100047589 469
139 3300013306 Ga0163162_10046629 Ga0163162_100466293 469
140 3300013307 Ga0157372_10004998 Ga0157372_1000499813 469
141 3300025904 Ga0207647_10000641 Ga0207647_100006418 469
142 3300025913 Ga0207695_10042590 Ga0207695_100425902 469
143 3300025949 Ga0207667_10211351 Ga0207667_102113512 469
144 3300033180 Ga0307510_10013998 Ga0307510_100139985 469
145 3300035115 Ga0373941_0001850 Ga0373941_0001850_762_2177 469
146 3300046460 Ga0495638_0066380 Ga0495638_0066380_418_1827 469
147 3300046471 Ga0495650_0000107 Ga0495650_0000107_96000_97409 469
148 3300046492 Ga0495585_0000014 Ga0495585_0000014_45705_47114 469
149 3300046512 Ga0495610_0009361 Ga0495610_0009361_4486_5895 469
150 3300046524 Ga0495648_0050375 Ga0495648_0050375_550_1962 469
151 3300046616 Ga0495668_0028708 Ga0495668_0028708_712_2121 469
152 3300046660 Ga0495625_0000021 Ga0495625_0000021_129497_130906 469
153 3300046665 Ga0495661_0034152 Ga0495661_0034152_130_1539 469
154 3300046694 Ga0495649_0000009 Ga0495649_0000009_328620_330029 469
155 3300046810 Ga0495660_0038252 Ga0495660_0038252_1035_2447 469
156 3300050493 nmdc:mga0k408_367_c1 nmdc:mga0k408_367_c1_12176_13588 469
157 3300053125 Ga0500618_014091 Ga0500618_014091_383_1795 469
158 3300053130 Ga0500642_0004644 Ga0500642_0004644_2695_4104 469

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gpn-assembly1.cif.gz_Ag architecture of mammalian respirasome 0.3033 316 461
5gup-assembly1.cif.gz_V cryo-em structure of mammalian respiratory supercomplex i1iii2iv1 0.2967 312 461
5gpn-assembly1.cif.gz_Ag architecture of mammalian respirasome 0.29 316 461
5gup-assembly1.cif.gz_V cryo-em structure of mammalian respiratory supercomplex i1iii2iv1 0.2746 312 461
7f4d-assembly1.cif.gz_R cryo-em structure of alpha-msh-bound melanocortin-1 receptor in complex with gs protein and nb35 0.2582 141 439
ID Description Score Start End Superfamily
af_Q54WU1_157_354_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.456 9 123 1.20.120.1770
af_Q54U56_114_443_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3431 141 398 1.25.40.10
af_A4I968_239_390_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3396 153 289 1.25.40.10
af_A4I968_239_390_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3067 153 289 1.25.40.10
af_Q54WU1_157_354_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3061 9 123 1.20.120.1770
ID Description Score Start End GO Terms
AF-A0A7X0CLD4-F1-model_v4 Oligosaccharide repeat unit polymerase 0.9645 65 467 GO:0016020
AF-A0A7X0CLD4-F1-model_v4 Oligosaccharide repeat unit polymerase 0.9599 65 467 GO:0016020
AF-A6EBN7-F1-model_v4 Transmembrane protein 0.9578 16 467 GO:0016020
AF-A0A3C1BI67-F1-model_v4 CHASE2 domain-containing protein 0.9507 299 467 GO:0016020
AF-A0A7K1YDY0-F1-model_v4 O-antigen polysaccharide polymerase Wzy 0.9493 1 467 GO:0016020

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Predicted Structure (AlphaFold2)

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