F228621

General Info

Members Datasets Scaffolds Average Seq Length
158 112 143 685

Family's Representative Sequence

Representative Sequence 3300002067|JGI24735J21928_10014897|JGI24735J21928_100148971
Length 736
Sequence VIQLIQSDTHSRVDQCVFEICTSNLIATFIDQANQNTMPFLKPIKAAGLFFVASLFFANAMLAQTINQQGLNKKTGVIVTQKASTVELTWPIGGVEHGRVVFDLAKGNPLFKSIQLTSAGKYKEVSAGLDPQFILTIGKRDLISQNGWNIFFDRVPQKPFKAYNVDFDKGQASVKSDGSRTIVSIDGISSHNFSGHLEVTFYNGSPLFNVAAVIATQVDSTAILYDAGLISQNPKWNKISWAKTNDEFTGAASSATDSARAVEVKYRTIIGETGKGSLAVFPAPHQYFYPLDEAFNLKFTWYGNNYRKMLPGYGIGIRQDLYGDHRYVPWFNAPPGTQQRLNFFCMIGAGDGKALLEKIKPFTHGDKFIPLPGYKTMSSHFHNEYTTSVLLKNKPVEAEPEYVRVFKNLGVNIVHLAEFHGTGHPKGPDEQRLKELNTLFKECEKESHGNFLLLPGEEPNEFFGGHWLEFFPKPVYWVMSRKEGVPFVAEDSRYGKVYHISNKDEMLKLLQDENGLAWTAHARTKGSTGFPDAYKDEAFYKSDHFNGAAWKNIPADLSTERMGKRVFDLMDDMSNWGLKKKVLAESDIFSITQQNEMYAHVNVNYLKLNTLPDFKNGWQPVLDVLKSGNFFSTTGEILIPDFKVNGAQAGSTIKVGPTTKSTVDFTVKWTYPLNFAEIVSGDGHGVYRQRINLKNTTAFGAQTFHIPVXXXXKTWVRLEVWDAAVNGAFTQTVWVN

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541278 Niastella sp. CF465 Isolate Unclassified
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
6 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
7 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
8 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
9 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
10 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
11 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
12 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
13 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
14 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
15 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
16 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
17 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
18 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
19 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
20 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
21 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
22 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
23 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
24 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
27 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
57 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
82 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
83 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
94 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
95 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
96 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
99 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
100 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
101 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
102 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
106 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
107 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
108 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
109 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
110 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
111 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
112 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.87
Metatranscriptomes 0
Isolates 10.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.19
Nodule 0
Rhizoplane 1.27
Rhizosphere 71.52
Stem 0
Stem Tuber 0
Unclassified 12.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_668967 2162886007 Bacteria 3130
2 JGI24739J22299_10007994 3300001989 Bacteria 3958
3 JGI24735J21928_10000019 3300002067 Bacteria 108890
4 JGI24735J21928_10014897 3300002067 Bacteria 2432
5 rootL2_10025920 3300003322 Bacteria 7631
6 rootL2_10027232 3300003322 Bacteria 9171
7 rootH1_10000149 3300003316 Bacteria 16615
8 rootH1_10000149 3300003323 Bacteria 69780
9 rootH1_10011604 3300003323 Bacteria 27204
10 rootH1_10126797 3300003323 Bacteria 6521
11 JGI25160J50197_1000603 3300003354 Bacteria 20112
12 JGI25160J50197_1001449 3300003354 Bacteria 11859
13 Ga0055528_1000179 3300003790 Bacteria 53605
14 Ga0055530_10000436 3300003791 Bacteria 37034
15 Ga0065165_1000280 3300005262 Bacteria 87088
16 Ga0065165_1000526 3300005262 Bacteria 58564
17 Ga0065714_10002537 3300005288 Bacteria 27651
18 Ga0065714_10002933 3300005288 Bacteria 54064
19 Ga0065704_10000227 3300005289 Bacteria 66518
20 Ga0065704_10071036 3300005289 Bacteria 13598
21 Ga0070680_100001016 3300005336 Bacteria 20025
22 Ga0070682_100001269 3300005337 Bacteria 14330
23 Ga0070691_10000387 3300005341 Bacteria 15992
24 Ga0070675_100092803 3300005354 Bacteria 2531
25 Ga0070674_100006505 3300005356 Bacteria 6824
26 Ga0070681_10014948 3300005458 Bacteria 7718
27 Ga0070679_100013098 3300005530 Bacteria 7941
28 Ga0068853_100003067 3300005539 Bacteria 12764
29 Ga0068853_100013223 3300005539 Bacteria 6735
30 Ga0070665_100000001 3300005548 Bacteria 1083363
31 Ga0068855_100027070 3300005563 Bacteria 6860
32 Ga0068855_100031919 3300005563 Bacteria 6287
33 Ga0068857_100022935 3300005577 Bacteria 5491
34 Ga0068860_100005461 3300005843 Bacteria 12886
35 Ga0068871_100015920 3300006358 Bacteria 5647
36 Ga0068865_100045692 3300006881 Bacteria 3003
37 Ga0105240_10000242 3300009093 Bacteria 108001
38 Ga0105240_10000283 3300009093 Bacteria 99553
39 Ga0105240_10000773 3300009093 Bacteria 58079
40 Ga0105240_10039497 3300009093 Bacteria 6042
41 Ga0105240_10043247 3300009093 Bacteria 5733
42 Ga0105240_10057230 3300009093 Bacteria 4873
43 Ga0105240_10145597 3300009093 Bacteria 2827
44 Ga0105241_10000357 3300009174 Bacteria 34720
45 Ga0105237_10001592 3300009545 Bacteria 29555
46 Ga0105237_10001852 3300009545 Bacteria 27137
47 Ga0105237_10012591 3300009545 Bacteria 8909
48 Ga0105237_10125748 3300009545 Unclassified 2558
49 Ga0105238_10000489 3300009551 Bacteria 41694
50 Ga0105238_10044148 3300009551 Unclassified 4508
51 Ga0105239_10000014 3300010375 Bacteria 325391
52 Ga0105239_10001445 3300010375 Bacteria 31648
53 Ga0105239_10002427 3300010375 Bacteria 23747
54 Ga0105239_10007505 3300010375 Bacteria 12508
55 Ga0157373_10007208 3300013100 Bacteria 8291
56 Ga0157373_10011096 3300013100 Bacteria 6630
57 Ga0157371_10000121 3300013102 Bacteria 118793
58 Ga0157371_10001084 3300013102 Bacteria 29465
59 Ga0157371_10003048 3300013102 Bacteria 15549
60 Ga0157371_10059645 3300013102 Bacteria 2705
61 Ga0157370_10000518 3300013104 Bacteria 48217
62 Ga0157370_10040448 3300013104 Bacteria 4501
63 Ga0157369_10014609 3300013105 Bacteria 8858
64 Ga0163162_10009432 3300013306 Bacteria 9491
65 Ga0157372_10000042 3300013307 Bacteria 157651
66 Ga0157372_10006849 3300013307 Bacteria 12126
67 Ga0157372_10008241 3300013307 Bacteria 11078
68 Ga0157380_10036605 3300014326 Bacteria 3798
69 Ga0182008_10000009 3300014497 Bacteria 331416
70 Ga0157376_10002262 3300014969 Bacteria 12994
71 Ga0182006_1000796 3300015261 Bacteria 21214
72 Ga0182005_1000203 3300015265 Bacteria 40192
73 Ga0163161_10000367 3300017792 Bacteria 37763
74 Ga0209436_101867 3300025208 Bacteria 6825
75 Ga0209673_1000014 3300025273 Bacteria 537082
76 Ga0209673_1000018 3300025273 Bacteria 458281
77 Ga0209564_1002814 3300025295 Bacteria 12917
78 Ga0209564_1003672 3300025295 Bacteria 10141
79 Ga0209758_1001144 3300025297 Bacteria 34032
80 Ga0209758_1001717 3300025297 Bacteria 24515
81 Ga0209050_1000481 3300025298 Bacteria 70155
82 Ga0207426_1000002 3300025302 Bacteria 1249660
83 Ga0207426_1000718 3300025302 Bacteria 38438
84 Ga0209257_1006782 3300025304 Bacteria 7209
85 Ga0207647_10002584 3300025904 Bacteria 13697
86 Ga0207654_10008818 3300025911 Bacteria 5116
87 Ga0207707_10000110 3300025912 Bacteria 82391
88 Ga0207695_10000066 3300025913 Bacteria 334103
89 Ga0207695_10003344 3300025913 Bacteria 22693
90 Ga0207695_10008818 3300025913 Bacteria 12561
91 Ga0207671_10005842 3300025914 Bacteria 11182
92 Ga0207671_10011178 3300025914 Bacteria 7329
93 Ga0207660_10002898 3300025917 Bacteria 11208
94 Ga0207652_10000265 3300025921 Bacteria 54617
95 Ga0207694_10059845 3300025924 Bacteria 2963
96 Ga0207667_10004551 3300025949 Bacteria 16994
97 Ga0207667_10047290 3300025949 Bacteria 4554
98 Ga0207639_10006744 3300026041 Bacteria 7813
99 Ga0207674_10010229 3300026116 Bacteria 10655
100 Ga0207698_10009885 3300026142 Bacteria 6101
101 Ga0268266_10000232 3300028379 Bacteria 95941
102 Ga0268264_10004109 3300028381 Bacteria 12453
103 Ga0307515_10000092 3300028794 Bacteria 212425
104 Ga0307515_10008111 3300028794 Bacteria 20574
105 Ga0316177_1080889 3300030731 Bacteria 5620
106 Ga0316183_1211687 3300030742 Bacteria 37631
107 Ga0316181_1220040 3300030744 Bacteria 23387
108 Ga0307412_10000181 3300031911 Bacteria 44202
109 Ga0307414_10000409 3300032004 Bacteria 23216
110 Ga0307414_10001110 3300032004 Bacteria 13736
111 Ga0395899_0000401 3300037312 Bacteria 50789
112 Ga0451807_2009447 3300041486 Unclassified 3175
113 Ga0466969_0009782 3300044656 Bacteria 5082
114 Ga0466961_0004150 3300044693 Bacteria 9046
115 Ga0495650_0000023 3300046471 Bacteria 527763
116 Ga0495585_0000263 3300046492 Bacteria 52564
117 Ga0495606_0000142 3300046507 Bacteria 123277
118 Ga0495606_0012392 3300046507 Bacteria 6840
119 Ga0495610_0003458 3300046512 Bacteria 12297
120 Ga0495616_0003532 3300046513 Bacteria 9994
121 Ga0495648_0018528 3300046524 Bacteria 4924
122 Ga0495633_0008204 3300046558 Bacteria 5913
123 Ga0495668_0000003 3300046616 Bacteria 695023
124 Ga0495611_0000099 3300046648 Bacteria 60428
125 Ga0495625_0001699 3300046660 Bacteria 25644
126 Ga0495625_0002280 3300046660 Bacteria 21065
127 Ga0495661_0002316 3300046665 Bacteria 14693
128 Ga0495649_0000778 3300046694 Bacteria 25653
129 Ga0495687_000001 3300047443 Bacteria 1215582
130 Ga0495687_002134 3300047443 Bacteria 16520
131 Ga0495686_0000718 3300047472 Bacteria 44415
132 Ga0496121_0000007 3300048924 Bacteria 942516
133 Ga0495678_020011 3300049459 Bacteria 2973
134 Ga0501207_001293 3300049654 Bacteria 3104
135 Ga0501242_001519 3300049674 Bacteria 2345
136 Ga0501257_003548 3300049686 Unclassified 3357
137 Ga0500635_0000871 3300053080 Bacteria 7350
138 Ga0500651_0000466 3300053093 Bacteria 21392
139 Ga0500652_004200 3300053131 Unclassified 4438
140 Ga0500622_0000007 3300053156 Bacteria 425621
141 Ga0500622_0000013 3300053156 Bacteria 371650
142 Ga0500622_0000358 3300053156 Bacteria 44392
143 Ga0500622_0017525 3300053156 Bacteria 3812

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10000283 Ga0105240_1000028377 611
2 3300009545 Ga0105237_10012591 Ga0105237_100125913 611
3 3300009551 Ga0105238_10000489 Ga0105238_1000048917 611
4 3300025913 Ga0207695_10003344 Ga0207695_100033444 611
5 3300025924 Ga0207694_10059845 Ga0207694_100598453 611
6 3300005548 Ga0070665_100000001 Ga0070665_100000001201 614
7 3300028379 Ga0268266_10000232 Ga0268266_1000023251 614
8 3300046524 Ga0495648_0018528 Ga0495648_0018528_803_2755 615
9 3300009545 Ga0105237_10001592 Ga0105237_100015929 621
10 3300047443 Ga0495687_000001 Ga0495687_000001_1000439_1002373 644
11 3300009093 Ga0105240_10043247 Ga0105240_100432474 645
12 3300009545 Ga0105237_10001852 Ga0105237_100018529 645
13 3300010375 Ga0105239_10002427 Ga0105239_100024272 645
14 3300025914 Ga0207671_10011178 Ga0207671_100111783 645
15 3300005563 Ga0068855_100027070 Ga0068855_1000270705 646
16 3300009093 Ga0105240_10039497 Ga0105240_100394973 646
17 3300009545 Ga0105237_10125748 Ga0105237_101257482 652
18 3300046648 Ga0495611_0000099 Ga0495611_0000099_32550_34544 656
19 3300026116 Ga0207674_10010229 Ga0207674_100102297 658
20 3300005843 Ga0068860_100005461 Ga0068860_1000054615 659
21 3300009551 Ga0105238_10044148 Ga0105238_100441483 659
22 3300013307 Ga0157372_10006849 Ga0157372_100068497 659
23 3300025949 Ga0207667_10004551 Ga0207667_100045519 659
24 3300028381 Ga0268264_10004109 Ga0268264_100041097 659
25 3300005262 Ga0065165_1000526 Ga0065165_10005267 667
26 3300005577 Ga0068857_100022935 Ga0068857_1000229353 668
27 3300025914 Ga0207671_10005842 Ga0207671_100058426 668
28 iso_pu_bacteria 2821136567 2821137737 668
29 iso_pu_bacteria 2904467357 2904467522 668
30 3300026142 Ga0207698_10009885 Ga0207698_100098855 669
31 iso_pu_bacteria 2818991442 2819574412 670
32 iso_pu_bacteria 2896109856 2896109956 671
33 3300005539 Ga0068853_100013223 Ga0068853_1000132231 673
34 3300015265 Ga0182005_1000203 Ga0182005_100020323 674
35 3300025208 Ga0209436_101867 Ga0209436_1018671 674
36 3300003323 rootH1_10126797 rootH1_101267972 675
37 3300005289 Ga0065704_10071036 Ga0065704_100710367 675
38 3300009093 Ga0105240_10000773 Ga0105240_1000077315 675
39 3300009174 Ga0105241_10000357 Ga0105241_1000035717 675
40 3300013104 Ga0157370_10000518 Ga0157370_1000051824 675
41 3300013105 Ga0157369_10014609 Ga0157369_100146094 676
42 3300013307 Ga0157372_10000042 Ga0157372_1000004218 676
43 3300037312 Ga0395899_0000401 Ga0395899_0000401_18494_20524 676
44 3300010375 Ga0105239_10007505 Ga0105239_100075056 677
45 3300009093 Ga0105240_10145597 Ga0105240_101455972 678
46 iso_pu_bacteria 2738541278 2738730603 679
47 3300032004 Ga0307414_10000409 Ga0307414_1000040914 680
48 3300041486 Ga0451807_2009447 Ga0451807_2009447_120_2195 680
49 3300010375 Ga0105239_10001445 Ga0105239_1000144520 681
50 3300014497 Ga0182008_10000009 Ga0182008_1000000983 682
51 3300003323 rootH1_10000149 rootH1_1000014953 683
52 iso_pu_bacteria 2896085136 2896089552 683
53 3300048924 Ga0496121_0000007 Ga0496121_0000007_153883_156024 684
54 iso_pu_bacteria 2929921140 2929926907 685
55 3300009093 Ga0105240_10000242 Ga0105240_1000024245 687
56 3300025913 Ga0207695_10000066 Ga0207695_10000066229 687
57 3300044656 Ga0466969_0009782 Ga0466969_0009782_791_2893 687
58 3300044693 Ga0466961_0004150 Ga0466961_0004150_2693_4795 687
59 iso_pu_bacteria 2945997725 2945999559 687
60 3300013100 Ga0157373_10011096 Ga0157373_100110963 688
61 3300003322 rootL2_10027232 rootL2_100272323 689
62 3300005336 Ga0070680_100001016 Ga0070680_1000010169 689
63 3300005337 Ga0070682_100001269 Ga0070682_10000126912 689
64 3300005341 Ga0070691_10000387 Ga0070691_100003873 689
65 3300005458 Ga0070681_10014948 Ga0070681_100149485 689
66 3300005530 Ga0070679_100013098 Ga0070679_1000130985 689
67 3300005539 Ga0068853_100003067 Ga0068853_1000030677 689
68 3300025911 Ga0207654_10008818 Ga0207654_100088182 689
69 3300025912 Ga0207707_10000110 Ga0207707_1000011015 689
70 3300025913 Ga0207695_10008818 Ga0207695_100088187 689
71 3300025917 Ga0207660_10002898 Ga0207660_100028985 689
72 3300025921 Ga0207652_10000265 Ga0207652_100002659 689
73 3300026041 Ga0207639_10006744 Ga0207639_100067447 689
74 3300046492 Ga0495585_0000263 Ga0495585_0000263_444_2513 689
75 3300053131 Ga0500652_004200 Ga0500652_004200_476_2545 689
76 3300053156 Ga0500622_0000358 Ga0500622_0000358_18241_20310 689
77 3300001989 JGI24739J22299_10007994 JGI24739J22299_100079943 690
78 3300003354 JGI25160J50197_1000603 JGI25160J50197_10006035 690
79 3300003790 Ga0055528_1000179 Ga0055528_100017916 690
80 3300003791 Ga0055530_10000436 Ga0055530_100004369 690
81 3300005262 Ga0065165_1000280 Ga0065165_100028017 690
82 3300025273 Ga0209673_1000014 Ga0209673_1000014243 690
83 3300025273 Ga0209673_1000018 Ga0209673_1000018191 690
84 3300025295 Ga0209564_1002814 Ga0209564_10028144 690
85 3300025295 Ga0209564_1003672 Ga0209564_10036724 690
86 3300025297 Ga0209758_1001144 Ga0209758_100114413 690
87 3300025297 Ga0209758_1001717 Ga0209758_100171712 690
88 3300025298 Ga0209050_1000481 Ga0209050_100048132 690
89 3300025302 Ga0207426_1000718 Ga0207426_100071827 690
90 3300025304 Ga0209257_1006782 Ga0209257_10067822 690
91 3300053156 Ga0500622_0000007 Ga0500622_0000007_766_2838 690
92 3300005354 Ga0070675_100092803 Ga0070675_1000928031 691
93 3300014326 Ga0157380_10036605 Ga0157380_100366053 691
94 3300015261 Ga0182006_1000796 Ga0182006_10007969 691
95 3300017792 Ga0163161_10000367 Ga0163161_1000036716 691
96 3300049654 Ga0501207_001293 Ga0501207_001293_938_3013 691
97 3300049674 Ga0501242_001519 Ga0501242_001519_199_2274 691
98 3300049686 Ga0501257_003548 Ga0501257_003548_412_2487 691
99 3300053156 Ga0500622_0017525 Ga0500622_0017525_457_2532 691
100 3300002067 JGI24735J21928_10014897 JGI24735J21928_100148971 692
101 3300013102 Ga0157371_10000121 Ga0157371_1000012110 692
102 3300013307 Ga0157372_10008241 Ga0157372_100082412 692
103 3300025904 Ga0207647_10002584 Ga0207647_1000258414 692
104 3300032004 Ga0307414_10001110 Ga0307414_100011101 692
105 3300053156 Ga0500622_0000013 Ga0500622_0000013_368847_370964 692
106 iso_pu_bacteria 2599185184 2599481523 692
107 iso_pu_bacteria 2928078545 2928082755 692
108 iso_pu_bacteria 2928147474 2928149788 692
109 iso_pu_bacteria 2932082852 2932086558 692
110 3300003323 rootH1_10011604 rootH1_1001160419 693
111 3300003354 JGI25160J50197_1001449 JGI25160J50197_10014494 693
112 3300006358 Ga0068871_100015920 Ga0068871_1000159202 693
113 3300006881 Ga0068865_100045692 Ga0068865_1000456921 693
114 3300014969 Ga0157376_10002262 Ga0157376_100022622 693
115 3300025302 Ga0207426_1000002 Ga0207426_100000287 693
116 3300028794 Ga0307515_10000092 Ga0307515_10000092164 693
117 3300047443 Ga0495687_002134 Ga0495687_002134_2538_4625 693
118 iso_pu_bacteria 2738541284 2738762877 693
119 iso_pu_bacteria 2775506987 2776614439 693
120 3300002067 JGI24735J21928_10000019 JGI24735J21928_1000001922 694
121 3300003322 rootL2_10025920 rootL2_100259204 694
122 3300005563 Ga0068855_100031919 Ga0068855_1000319196 694
123 3300010375 Ga0105239_10000014 Ga0105239_10000014150 694
124 3300013102 Ga0157371_10059645 Ga0157371_100596452 694
125 3300013306 Ga0163162_10009432 Ga0163162_100094329 694
126 3300025949 Ga0207667_10047290 Ga0207667_100472903 694
127 3300028794 Ga0307515_10008111 Ga0307515_100081119 694
128 3300046471 Ga0495650_0000023 Ga0495650_0000023_189177_191267 694
129 3300046507 Ga0495606_0000142 Ga0495606_0000142_96844_98934 694
130 3300046512 Ga0495610_0003458 Ga0495610_0003458_1482_3572 694
131 3300046513 Ga0495616_0003532 Ga0495616_0003532_7735_9825 694
132 3300046558 Ga0495633_0008204 Ga0495633_0008204_1374_3464 694
133 3300046616 Ga0495668_0000003 Ga0495668_0000003_257382_259487 694
134 3300046660 Ga0495625_0001699 Ga0495625_0001699_23374_25464 694
135 3300046660 Ga0495625_0002280 Ga0495625_0002280_16902_19004 694
136 3300046665 Ga0495661_0002316 Ga0495661_0002316_281_2371 694
137 3300046694 Ga0495649_0000778 Ga0495649_0000778_23383_25473 694
138 3300047472 Ga0495686_0000718 Ga0495686_0000718_34213_36309 694
139 3300049459 Ga0495678_020011 Ga0495678_020011_478_2583 694
140 iso_pu_bacteria 2919437846 2919440818 694
141 3300005356 Ga0070674_100006505 Ga0070674_1000065053 695
142 3300009093 Ga0105240_10057230 Ga0105240_100572304 695
143 3300013100 Ga0157373_10007208 Ga0157373_100072085 695
144 3300053080 Ga0500635_0000871 Ga0500635_0000871_1324_3459 695
145 iso_pu_bacteria 2842903701 2842904670 695
146 3300030731 Ga0316177_1080889 Ga0316177_10808892 696
147 3300030742 Ga0316183_1211687 Ga0316183_12116877 696
148 3300030744 Ga0316181_1220040 Ga0316181_122004012 696
149 3300046507 Ga0495606_0012392 Ga0495606_0012392_2664_4769 696
150 2162886007 SwRhRL2b_contig_668967 SwRhRL2b_0691.00000130 697
151 3300005288 Ga0065714_10002537 Ga0065714_100025379 697
152 3300005288 Ga0065714_10002933 Ga0065714_1000293349 697
153 3300005289 Ga0065704_10000227 Ga0065704_1000022743 697
154 3300013102 Ga0157371_10001084 Ga0157371_1000108410 697
155 3300013102 Ga0157371_10003048 Ga0157371_1000304812 697
156 3300013104 Ga0157370_10040448 Ga0157370_100404483 697
157 3300031911 Ga0307412_10000181 Ga0307412_1000018129 697
158 3300053093 Ga0500651_0000466 Ga0500651_0000466_1965_4058 697

Structural Annotation

Top 5 Hits

ID Description Score Start End
2a3k-assembly1.cif.gz_A crystal structure of the human protein tyrosine phosphatase, ptpn7 (heptp, hematopoietic protein tyrosine phosphatase) 0.6663 134 163
6z2o-assembly1.cif.gz_A crystal structure of wild type ogpa from akkermansia muciniphila in p 21 21 21 0.6574 596 694
1nep-assembly1.cif.gz_A crystal structure analysis of the bovine npc2 (niemann-pick c2) protein 0.6478 597 697
6z2d-assembly1.cif.gz_A crystal structure of wild type ogpa from akkermansia muciniphila in p 41 21 2 0.6373 596 694
3qv0-assembly1.cif.gz_A crystal structure of saccharomyces cerevisiae mam33 0.6298 34 86
ID Description Score Start End Superfamily
af_Q9BKX7_420_708_3.90.190.10 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.6868 134 163 3.90.190.10
af_Q5SSL4_485_627_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.6726 618 682 2.60.40.150
5aa7B00 Mainly Beta;Distorted Sandwich;Coagulation Factor XIII; Chain A, domain 1;chitin-binding protein cbp21 0.6719 612 696 2.70.50.50
af_B0R0B4_933_1058_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.6645 619 682 2.60.40.150
af_A0A0G2JTR4_468_610_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.6594 618 682 2.60.40.150
ID Description Score Start End GO Terms
AF-A0A519ZDM5-F1-model_v4 Uncharacterized protein 0.9907 586 697
AF-A0A519X4W7-F1-model_v4 Uncharacterized protein 0.9822 362 697
AF-A0A519X4W7-F1-model_v4 Uncharacterized protein 0.9793 362 697
AF-A0A519W1M4-F1-model_v4 Uncharacterized protein 0.9742 502 697
AF-A0A2D9XGE4-F1-model_v4 Uncharacterized protein 0.9736 411 696

Feature Viewer

pLDDT pTM Quality
87.04 0.88 High
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Predicted Structure (AlphaFold2)

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