F225009

General Info

Members Datasets Scaffolds Average Seq Length
156 113 312 480

Family's Representative Sequence

Representative Sequence 3300025923|Ga0207681_10055541|Ga0207681_100555412
Length 541
Sequence LSSRVYDFALAAASGVLLALSFPKFGHPSLAWVALAPLLVALTPPARLSSRDRSLRRALLLGLFTGIIYFTGTLYWITLVMAVYGGLQQWVAVLVNAALIAYLALFPAVFAIVMRRLVLAYGPRALAAAPAVWVATELGRTHVFTGFPWVLLGYSQTTVLPVAQFASIFGVYGVSMLVASVSAALAMVMADGAPEGPPRVRARPERSDVGRPFRAATAIRFAPIVIVLVVLAGIAAWGARRASAAAWTREGEAIRVGLIQGNIDQAVKRNESHANAIFQGYISKTREALQRGAEFVIWPESSTPFMFGEDVDASSQIRMLARQAQVPILVGSDQVERGPGASFKYYNSAFLVRADGTSGTAYRKMHLVPFGEYVPLKRLLFFAAPLVEAVSDFSAGEEAVLLPVGNHMVSTAICYEVVYPDLVRQFVVGGSEMLTTITNDAWFGATSAPYQHFAQASMRAIENGRFLVRAANTGISGIVDPYGHVLARTGLFEPAVVVGDARFLRDATLYSRTGDVFAYACTALTALLLVSAMRSGRIRRI

Samples

Sample ID Description Type Environment
1 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
89 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.77
Rhizosphere 94.23
Stem 0
Stem Tuber 0
Unclassified 5.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207681_10055541 3300025923 Bacteria 2698
2 Ga0070676_10048151 3300005328 Bacteria 2492
3 Ga0070666_10008194 3300005335 Bacteria 6477
4 Ga0070666_10062129 3300005335 Bacteria 2529
5 Ga0070660_100025437 3300005339 Bacteria 4400
6 Ga0070660_100045408 3300005339 Bacteria 3363
7 Ga0070689_100044343 3300005340 Bacteria 3421
8 Ga0070691_10008986 3300005341 Bacteria 4570
9 Ga0070687_100010555 3300005343 Unclassified 4001
10 Ga0070661_100028217 3300005344 Bacteria 4047
11 Ga0070669_100016495 3300005353 Bacteria 5270
12 Ga0070674_100000436 3300005356 Bacteria 21015
13 Ga0070674_100032908 3300005356 Bacteria 3446
14 Ga0070673_100096280 3300005364 Bacteria 2429
15 Ga0070688_100024711 3300005365 Bacteria 3550
16 Ga0070667_100099994 3300005367 Bacteria 2504
17 Ga0070703_10022736 3300005406 Bacteria 1842
18 Ga0070714_100012482 3300005435 Bacteria 6784
19 Ga0070713_100063698 3300005436 Unclassified 3093
20 Ga0070701_10005458 3300005438 Bacteria 5256
21 Ga0070705_100026804 3300005440 Bacteria 3140
22 Ga0070662_100040662 3300005457 Bacteria 3312
23 Ga0070681_10023998 3300005458 Bacteria 6140
24 Ga0068867_100007694 3300005459 Bacteria 7622
25 Ga0070698_100093419 3300005471 Bacteria 2988
26 Ga0070679_100055942 3300005530 Bacteria 3930
27 Ga0070695_100004230 3300005545 Bacteria 8399
28 Ga0070665_100005699 3300005548 Bacteria 12790
29 Ga0070704_100022694 3300005549 Bacteria 4087
30 Ga0070704_100035475 3300005549 Bacteria 3390
31 Ga0068855_100128809 3300005563 Bacteria 2891
32 Ga0070664_100235871 3300005564 Bacteria 1641
33 Ga0068854_100033732 3300005578 Bacteria 3570
34 Ga0070702_100019418 3300005615 Bacteria 3544
35 Ga0068861_100002889 3300005719 Bacteria 11319
36 Ga0068861_100011289 3300005719 Bacteria 6203
37 Ga0068861_100143761 3300005719 Bacteria 1950
38 Ga0068858_100011864 3300005842 Bacteria 8211
39 Ga0068858_100062925 3300005842 Bacteria 3432
40 Ga0068860_100061968 3300005843 Bacteria 3554
41 Ga0068860_100131943 3300005843 Bacteria 2398
42 Ga0068862_100023874 3300005844 Bacteria 5126
43 Ga0081455_10136184 3300005937 Bacteria 1913
44 Ga0081539_10014297 3300005985 Bacteria 5884
45 Ga0097621_100001505 3300006237 Bacteria 15948
46 Ga0097621_100019360 3300006237 Bacteria 5222
47 Ga0097621_100037079 3300006237 Bacteria 3903
48 Ga0068871_100000536 3300006358 Bacteria 25860
49 Ga0068871_100011069 3300006358 Bacteria 6611
50 Ga0068871_100039221 3300006358 Bacteria 3789
51 Ga0075434_100023484 3300006871 Bacteria 6011
52 Ga0075434_100063738 3300006871 Bacteria 3669
53 Ga0068865_100055104 3300006881 Bacteria 2765
54 Ga0068865_100136404 3300006881 Bacteria 1845
55 Ga0075436_100115160 3300006914 Bacteria 1878
56 Ga0075435_100097209 3300007076 Bacteria 2436
57 Ga0105240_10089339 3300009093 Bacteria 3768
58 Ga0111539_10011957 3300009094 Bacteria 10883
59 Ga0111539_10048353 3300009094 Bacteria 5078
60 Ga0105245_10084746 3300009098 Bacteria 2904
61 Ga0105247_10014457 3300009101 Bacteria 4734
62 Ga0105247_10084764 3300009101 Bacteria 2003
63 Ga0114129_10000192 3300009147 Bacteria 68551
64 Ga0114129_10017742 3300009147 Bacteria 10135
65 Ga0105243_10014967 3300009148 Bacteria 5872
66 Ga0105243_10032420 3300009148 Bacteria 4037
67 Ga0105243_10071234 3300009148 Bacteria 2810
68 Ga0105242_10019339 3300009176 Bacteria 5335
69 Ga0105242_10062594 3300009176 Bacteria 3062
70 Ga0105248_10005231 3300009177 Bacteria 14296
71 Ga0105248_10096124 3300009177 Bacteria 3336
72 Ga0105248_10318623 3300009177 Bacteria 1751
73 Ga0105249_10040204 3300009553 Bacteria 4247
74 Ga0163162_10048331 3300013306 Bacteria 4262
75 Ga0157375_10028107 3300013308 Bacteria 5266
76 Ga0157380_10051667 3300014326 Bacteria 3252
77 Ga0157379_10055436 3300014968 Bacteria 3541
78 Ga0157376_10059873 3300014969 Bacteria 3195
79 Ga0163161_10045027 3300017792 Bacteria 3180
80 Ga0207680_10038379 3300025903 Bacteria 2772
81 Ga0207645_10004943 3300025907 Bacteria 9772
82 Ga0207645_10019245 3300025907 Bacteria 4478
83 Ga0207695_10091578 3300025913 Bacteria 3054
84 Ga0207662_10017470 3300025918 Unclassified 4059
85 Ga0207657_10008780 3300025919 Bacteria 10228
86 Ga0207652_10069853 3300025921 Unclassified 3049
87 Ga0207681_10022410 3300025923 Bacteria 4028
88 Ga0207681_10023837 3300025923 Bacteria 3920
89 Ga0207681_10062273 3300025923 Bacteria 2568
90 Ga0207659_10021745 3300025926 Bacteria 4264
91 Ga0207659_10025840 3300025926 Bacteria 3953
92 Ga0207700_10014619 3300025928 Bacteria 5149
93 Ga0207706_10054346 3300025933 Bacteria 3534
94 Ga0207709_10013248 3300025935 Bacteria 4548
95 Ga0207669_10026035 3300025937 Bacteria 3174
96 Ga0207711_10087974 3300025941 Bacteria 2727
97 Ga0207651_10009020 3300025960 Bacteria 5425
98 Ga0207640_10015723 3300025981 Bacteria 4385
99 Ga0207640_10050336 3300025981 Bacteria 2702
100 Ga0207703_10110975 3300026035 Bacteria 2340
101 Ga0207708_10000748 3300026075 Bacteria 24397
102 Ga0207708_10011554 3300026075 Bacteria 6579
103 Ga0207708_10124854 3300026075 Bacteria 2008
104 Ga0207648_10005742 3300026089 Bacteria 12439
105 Ga0207648_10047768 3300026089 Bacteria 3750
106 Ga0207675_100012084 3300026118 Bacteria 8067
107 Ga0207675_100015354 3300026118 Bacteria 7144
108 Ga0207675_100086065 3300026118 Bacteria 2951
109 Ga0207683_10016887 3300026121 Bacteria 6210
110 Ga0207698_10122025 3300026142 Unclassified 2208
111 Ga0207428_10074392 3300027907 Bacteria 2664
112 Ga0268266_10099468 3300028379 Bacteria 2560
113 Ga0268265_10065144 3300028380 Bacteria 2810
114 Ga0268265_10065564 3300028380 Bacteria 2803
115 Ga0268265_10088025 3300028380 Bacteria 2473
116 Ga0268264_10011674 3300028381 Bacteria 7245
117 Ga0307408_100176931 3300031548 Bacteria 1708
118 Ga0307415_100036222 3300032126 Bacteria 3232
119 Ga0373943_0004777 3300035170 Bacteria 6124
120 Ga0373925_0020759 3300037068 Bacteria 4786
121 Ga0453684_0168166 3300044712 Bacteria 2586
122 Ga0495630_0002043 3300046517 Bacteria 14037
123 Ga0495621_0011407 3300046539 Bacteria 2748
124 Ga0495656_0042078 3300046615 Unclassified 1912
125 Ga0495634_0014650 3300046642 Bacteria 5646
126 Ga0495634_0103172 3300046642 Bacteria 1841
127 Ga0495647_0007971 3300046681 Bacteria 3560
128 Ga0495613_0000291 3300046689 Bacteria 46041
129 Ga0495604_0153911 3300047317 Bacteria 1631
130 Ga0495674_0103228 3300047319 Bacteria 2424
131 Ga0495684_0000515 3300047471 Bacteria 31395
132 Ga0496100_0001497 3300048903 Bacteria 11450
133 Ga0496101_0014752 3300048904 Bacteria 5257
134 Ga0496104_0036518 3300048907 Bacteria 4594
135 Ga0496105_0052808 3300048908 Bacteria 3357
136 Ga0496108_0058670 3300048911 Bacteria 3236
137 Ga0496109_0217222 3300048912 Unclassified 1798
138 Ga0496110_0086210 3300048913 Bacteria 2803
139 Ga0496112_0024060 3300048915 Bacteria 5829
140 Ga0496114_0012036 3300048917 Bacteria 6920
141 Ga0501034_0011900 3300049571 Bacteria 9000
142 Ga0501034_0019366 3300049571 Bacteria 6961
143 Ga0501034_0047276 3300049571 Bacteria 4346
144 Ga0501034_0070875 3300049571 Bacteria 3496
145 Ga0501047_0003505 3300049581 Bacteria 14821
146 Ga0501080_0105275 3300049742 Bacteria 2616
147 nmdc:mga05p37_18959_c1 3300050507 Bacteria 8320
148 nmdc:mga08y16_3605_c1 3300050511 Bacteria 16075
149 nmdc:mga0n895_5669_c1 3300050512 Bacteria 10464
150 nmdc:mga0n895_80424_c1 3300050512 Bacteria 3247
151 nmdc:mga0rr50_68002_c1 3300050513 Bacteria 2708
152 Ga0495601_0043804 3300053077 Bacteria 2811
153 Ga0495601_0087267 3300053077 Unclassified 2006
154 Ga0495619_0000690 3300053085 Bacteria 22103
155 Ga0495619_0007597 3300053085 Bacteria 6865
156 Ga0495619_0087325 3300053085 Bacteria 2108
157 Ga0207681_10055541
158 Ga0070676_10048151
159 Ga0070666_10008194
160 Ga0070666_10062129
161 Ga0070660_100025437
162 Ga0070660_100045408
163 Ga0070689_100044343
164 Ga0070691_10008986
165 Ga0070687_100010555
166 Ga0070661_100028217
167 Ga0070669_100016495
168 Ga0070674_100000436
169 Ga0070674_100032908
170 Ga0070673_100096280
171 Ga0070688_100024711
172 Ga0070667_100099994
173 Ga0070703_10022736
174 Ga0070714_100012482
175 Ga0070713_100063698
176 Ga0070701_10005458
177 Ga0070705_100026804
178 Ga0070662_100040662
179 Ga0070681_10023998
180 Ga0068867_100007694
181 Ga0070698_100093419
182 Ga0070679_100055942
183 Ga0070695_100004230
184 Ga0070665_100005699
185 Ga0070704_100022694
186 Ga0070704_100035475
187 Ga0068855_100128809
188 Ga0070664_100235871
189 Ga0068854_100033732
190 Ga0070702_100019418
191 Ga0068861_100002889
192 Ga0068861_100011289
193 Ga0068861_100143761
194 Ga0068858_100011864
195 Ga0068858_100062925
196 Ga0068860_100061968
197 Ga0068860_100131943
198 Ga0068862_100023874
199 Ga0081455_10136184
200 Ga0081539_10014297
201 Ga0097621_100001505
202 Ga0097621_100019360
203 Ga0097621_100037079
204 Ga0068871_100000536
205 Ga0068871_100011069
206 Ga0068871_100039221
207 Ga0075434_100023484
208 Ga0075434_100063738
209 Ga0068865_100055104
210 Ga0068865_100136404
211 Ga0075436_100115160
212 Ga0075435_100097209
213 Ga0105240_10089339
214 Ga0111539_10011957
215 Ga0111539_10048353
216 Ga0105245_10084746
217 Ga0105247_10014457
218 Ga0105247_10084764
219 Ga0114129_10000192
220 Ga0114129_10017742
221 Ga0105243_10014967
222 Ga0105243_10032420
223 Ga0105243_10071234
224 Ga0105242_10019339
225 Ga0105242_10062594
226 Ga0105248_10005231
227 Ga0105248_10096124
228 Ga0105248_10318623
229 Ga0105249_10040204
230 Ga0163162_10048331
231 Ga0157375_10028107
232 Ga0157380_10051667
233 Ga0157379_10055436
234 Ga0157376_10059873
235 Ga0163161_10045027
236 Ga0207680_10038379
237 Ga0207645_10004943
238 Ga0207645_10019245
239 Ga0207695_10091578
240 Ga0207662_10017470
241 Ga0207657_10008780
242 Ga0207652_10069853
243 Ga0207681_10022410
244 Ga0207681_10023837
245 Ga0207681_10062273
246 Ga0207659_10021745
247 Ga0207659_10025840
248 Ga0207700_10014619
249 Ga0207706_10054346
250 Ga0207709_10013248
251 Ga0207669_10026035
252 Ga0207711_10087974
253 Ga0207651_10009020
254 Ga0207640_10015723
255 Ga0207640_10050336
256 Ga0207703_10110975
257 Ga0207708_10000748
258 Ga0207708_10011554
259 Ga0207708_10124854
260 Ga0207648_10005742
261 Ga0207648_10047768
262 Ga0207675_100012084
263 Ga0207675_100015354
264 Ga0207675_100086065
265 Ga0207683_10016887
266 Ga0207698_10122025
267 Ga0207428_10074392
268 Ga0268266_10099468
269 Ga0268265_10065144
270 Ga0268265_10065564
271 Ga0268265_10088025
272 Ga0268264_10011674
273 Ga0307408_100176931
274 Ga0307415_100036222
275 Ga0373943_0004777
276 Ga0373925_0020759
277 Ga0453684_0168166
278 Ga0495630_0002043
279 Ga0495621_0011407
280 Ga0495656_0042078
281 Ga0495634_0014650
282 Ga0495634_0103172
283 Ga0495647_0007971
284 Ga0495613_0000291
285 Ga0495604_0153911
286 Ga0495674_0103228
287 Ga0495684_0000515
288 Ga0496100_0001497
289 Ga0496101_0014752
290 Ga0496104_0036518
291 Ga0496105_0052808
292 Ga0496108_0058670
293 Ga0496109_0217222
294 Ga0496110_0086210
295 Ga0496112_0024060
296 Ga0496114_0012036
297 Ga0501034_0011900
298 Ga0501034_0019366
299 Ga0501034_0047276
300 Ga0501034_0070875
301 Ga0501047_0003505
302 Ga0501080_0105275
303 nmdc:mga05p37_18959_c1
304 nmdc:mga08y16_3605_c1
305 nmdc:mga0n895_5669_c1
306 nmdc:mga0n895_80424_c1
307 nmdc:mga0rr50_68002_c1
308 Ga0495601_0043804
309 Ga0495601_0087267
310 Ga0495619_0000690
311 Ga0495619_0007597
312 Ga0495619_0087325

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20154

LNT_N

Apolipoprotein N-acyltransferase N-terminal domain

14

184

0.93

PF00795

CN_hydrolase

Carbon-nitrogen hydrolase

255

503

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5n6h-assembly2.cif.gz_B structure of the membrane integral lipoprotein n-acyltransferase lnt from e. coli 0.8881 4 514
5vrh-assembly1.cif.gz_A apolipoprotein n-acyltransferase c387s active site mutant 0.8778 4 514
8aq2-assembly1.cif.gz_A in meso structure of the membrane integral lipoprotein n-acyltransferase lnt from p. aeruginosa covalently linked with titc 0.8734 1 514
5n6l-assembly2.cif.gz_B structure of the membrane integral lipoprotein n-acyltransferase lnt c387a mutant from e. coli 0.8692 4 514
8b0o-assembly1.cif.gz_A cryo-em structure apolipoprotein n-acyltransferase lnt from e.coli in complex with fp3 0.867 4 514
ID Description Score Start End Superfamily
af_P23930_215_482_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9239 246 500 3.60.110.10
af_O53493_232_506_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8962 244 504 3.60.110.10
af_P23930_215_482_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8779 246 500 3.60.110.10
af_O53493_232_506_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8502 244 504 3.60.110.10
af_O59829_1_271_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8176 246 493 3.60.110.10
ID Description Score Start End GO Terms
AF-A0A7C7BYI5-F1-model_v4 Apolipoprotein N-acyltransferase 0.9866 390 512 GO:0005886
GO:0016410
GO:0042158
AF-A0A6L8GJ12-F1-model_v4 Apolipoprotein N-acyltransferase 0.9796 415 512 GO:0005886
GO:0016410
GO:0042158
AF-A0A538BDX5-F1-model_v4 Glycosyltransferase 0.9749 416 514 GO:0004582
GO:0009247
GO:0016020
AF-A0A3B8MQE8-F1-model_v4 Twin-arginine translocase subunit TatC 0.9732 384 512 GO:0009977
GO:0016410
GO:0033281
GO:0042158
GO:0043953
GO:0065002
AF-A0A7X7BYF2-F1-model_v4 CN hydrolase domain-containing protein 0.9707 383 513 GO:0005886
GO:0016410
GO:0042158

Map