F224938

General Info

Members Datasets Scaffolds Average Seq Length
156 103 312 461

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10000856|Ga0213872_100008568
Length 514
Sequence VVRQIKCASVPISAISVPSPFPSISVFPHAFRPFRSALVWYNVVRGSSLFRKILVANRGEIAVRIIRALREMNITSIAVFSDVDRPALHVQMADEAVHIGPAPSSESYLAGKRILEAAKATGADAIHPGYGFLSENAAFAKSCEHAGIKFIGPSWQAIAQMGSKTAARRIAIEAGAPVVPGTQEGISSPLEARSVASELGYPVLLKAKGMRRVDSDAELLAAMRAASSEAERAFGSGEIYLEKFIERPRHIEVQVLGDEHGHLIHLGERECSIQRRHQKVVEECPSPLILAHPELREKIGHAALQIARAASYTNAGTLEFLADQHGNFYFLEMNTRLQVEHPVTEWVTGIDLVHWQIRIAAGERLTLEQNDIRWTGSAIECRIYAEDPAHNFFPSPGRITRYAEPSGPGVRVDAGVYPGWTVPIEYDPLLAKLSVWGSSRELAIQRMHRAVSEYRVLGITSNIGLFERLMLDRQWQAGDLHTAFLEEFMQRSRDPEEDAGALLWRSQGRRALRR

Samples

Sample ID Description Type Environment
1 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
63 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
64 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
66 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
73 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
74 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
79 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
80 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
88 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
97 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
98 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
99 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
100 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
101 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
102 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
103 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.72
Metatranscriptomes 1.28
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.64
Nodule 0
Rhizoplane 2.56
Rhizosphere 93.59
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213872_10000856 3300021361 Bacteria 22041
2 Ga0070658_10025064 3300005327 Bacteria 4781
3 Ga0070658_10036655 3300005327 Bacteria 3953
4 Ga0070658_10135919 3300005327 Bacteria 2051
5 Ga0070660_100009531 3300005339 Bacteria 6835
6 Ga0070660_100009535 3300005339 Bacteria 6835
7 Ga0070660_100039818 3300005339 Bacteria 3573
8 Ga0070661_100022646 3300005344 Bacteria 4499
9 Ga0070661_100181853 3300005344 Bacteria 1600
10 Ga0070671_100185479 3300005355 Bacteria 1762
11 Ga0070659_100050714 3300005366 Bacteria 3262
12 Ga0070714_100002387 3300005435 Bacteria 13815
13 Ga0070714_100015381 3300005435 Bacteria 6157
14 Ga0070714_100019692 3300005435 Bacteria 5502
15 Ga0070714_100030951 3300005435 Bacteria 4459
16 Ga0070714_100152195 3300005435 Bacteria 2085
17 Ga0070713_100046797 3300005436 Bacteria 3551
18 Ga0070681_10091263 3300005458 Bacteria 2996
19 Ga0070681_10118363 3300005458 Bacteria 2586
20 Ga0070679_100250689 3300005530 Bacteria 1727
21 Ga0068853_100161281 3300005539 Bacteria 2024
22 Ga0070695_100000023 3300005545 Bacteria 60293
23 Ga0068855_100003521 3300005563 Bacteria 19148
24 Ga0068855_100017384 3300005563 Bacteria 8652
25 Ga0068855_100156713 3300005563 Bacteria 2587
26 Ga0070664_100146155 3300005564 Bacteria 2085
27 Ga0068857_100017543 3300005577 Bacteria 6276
28 Ga0068856_100116347 3300005614 Bacteria 2674
29 Ga0068856_100119299 3300005614 Bacteria 2639
30 Ga0068864_100068756 3300005618 Bacteria 3078
31 Ga0068863_100004733 3300005841 Bacteria 13409
32 Ga0068863_100047975 3300005841 Bacteria 4049
33 Ga0068858_100138898 3300005842 Bacteria 2281
34 Ga0081455_10007768 3300005937 Bacteria 11244
35 Ga0081538_10000331 3300005981 Bacteria 53873
36 Ga0097621_100040231 3300006237 Bacteria 3758
37 Ga0068871_100143808 3300006358 Bacteria 2029
38 Ga0105240_10001402 3300009093 Bacteria 41381
39 Ga0105240_10012636 3300009093 Bacteria 11641
40 Ga0105240_10353431 3300009093 Bacteria 1667
41 Ga0114129_10357821 3300009147 Bacteria 1932
42 Ga0105241_10034563 3300009174 Bacteria 3798
43 Ga0105242_10016576 3300009176 Bacteria 5729
44 Ga0105242_10071723 3300009176 Bacteria 2875
45 Ga0105237_10003613 3300009545 Bacteria 18262
46 Ga0105237_10118438 3300009545 Bacteria 2642
47 Ga0105237_10172515 3300009545 Bacteria 2163
48 Ga0105238_10046163 3300009551 Bacteria 4398
49 Ga0105239_10005691 3300010375 Bacteria 14561
50 Ga0157370_10002230 3300013104 Bacteria 23582
51 Ga0157370_10008670 3300013104 Bacteria 10942
52 Ga0157370_10097035 3300013104 Bacteria 2765
53 Ga0157369_10002154 3300013105 Bacteria 23737
54 Ga0157369_10002618 3300013105 Bacteria 21517
55 Ga0157374_10135138 3300013296 Bacteria 2390
56 Ga0157374_10195117 3300013296 Bacteria 1981
57 Ga0163162_10001773 3300013306 Bacteria 20228
58 Ga0157375_10022708 3300013308 Bacteria 5777
59 Ga0163163_10001078 3300014325 Bacteria 23143
60 Ga0206356_11449565 3300020070 Bacteria 2357
61 Ga0206353_10043950 3300020082 Bacteria 2963
62 Ga0213875_10000065 3300021388 Bacteria 128682
63 Ga0213875_10007631 3300021388 Bacteria 5575
64 Ga0207705_10019057 3300025909 Bacteria 4909
65 Ga0207705_10184357 3300025909 Bacteria 1576
66 Ga0207707_10024008 3300025912 Bacteria 5331
67 Ga0207695_10020627 3300025913 Bacteria 7544
68 Ga0207695_10040962 3300025913 Bacteria 4961
69 Ga0207695_10216088 3300025913 Bacteria 1826
70 Ga0207663_10140535 3300025916 Bacteria 1681
71 Ga0207657_10004222 3300025919 Bacteria 15222
72 Ga0207657_10019540 3300025919 Bacteria 6429
73 Ga0207657_10022752 3300025919 Bacteria 5854
74 Ga0207649_10016007 3300025920 Bacteria 4222
75 Ga0207652_10116444 3300025921 Bacteria 2374
76 Ga0207652_10164034 3300025921 Bacteria 1992
77 Ga0207646_10206017 3300025922 Bacteria 1776
78 Ga0207646_10212373 3300025922 Bacteria 1748
79 Ga0207700_10012976 3300025928 Bacteria 5398
80 Ga0207664_10044523 3300025929 Bacteria 3476
81 Ga0207664_10059298 3300025929 Bacteria 3047
82 Ga0207664_10081037 3300025929 Bacteria 2640
83 Ga0207664_10238077 3300025929 Bacteria 1584
84 Ga0207644_10064844 3300025931 Bacteria 2655
85 Ga0207686_10013626 3300025934 Bacteria 4502
86 Ga0207686_10024107 3300025934 Bacteria 3521
87 Ga0207686_10078629 3300025934 Bacteria 2145
88 Ga0207711_10111732 3300025941 Bacteria 2431
89 Ga0207689_10021053 3300025942 Bacteria 5481
90 Ga0207667_10007855 3300025949 Bacteria 12740
91 Ga0207667_10120558 3300025949 Bacteria 2703
92 Ga0207702_10033731 3300026078 Bacteria 4277
93 Ga0207702_10108650 3300026078 Bacteria 2462
94 Ga0207641_10012733 3300026088 Bacteria 6896
95 Ga0207676_10090028 3300026095 Bacteria 2517
96 Ga0207674_10008609 3300026116 Bacteria 11763
97 Ga0207698_10030137 3300026142 Bacteria 3897
98 Ga0268266_10040880 3300028379 Bacteria 3953
99 Ga0265338_10011502 3300028800 Bacteria 10214
100 Ga0373926_0006501 3300035083 Bacteria 3879
101 Ga0373953_0007945 3300035117 Bacteria 3579
102 Ga0373935_0031224 3300035692 Bacteria 3305
103 Ga0373927_0004677 3300035695 Bacteria 9546
104 Ga0373927_0023898 3300035695 Bacteria 3998
105 Ga0373933_0035467 3300035724 Bacteria 2913
106 Ga0373937_0004848 3300036401 Bacteria 11433
107 Ga0373937_0054465 3300036401 Bacteria 3671
108 Ga0373937_0127533 3300036401 Bacteria 2374
109 Ga0373925_0009926 3300037068 Bacteria 6914
110 Ga0395900_0035023 3300037418 Bacteria 5170
111 Ga0395898_0041504 3300037466 Bacteria 4544
112 Ga0436364_0828992 3300037853 Bacteria 61632
113 Ga0436364_1214913 3300037853 Bacteria 8601
114 Ga0436360_0719696 3300039438 Bacteria 1588
115 Ga0436361_0381832 3300039447 Bacteria 88698
116 Ga0451853_1044213 3300041512 Bacteria 2606
117 Ga0466966_0011925 3300044684 Bacteria 5761
118 Ga0466961_0031246 3300044693 Bacteria 3423
119 Ga0466963_0001526 3300044694 Bacteria 12532
120 Ga0466963_0023530 3300044694 Bacteria 3913
121 Ga0466963_0077711 3300044694 Bacteria 2243
122 Ga0466964_0044768 3300044706 Bacteria 1799
123 Ga0466971_0027976 3300044719 Bacteria 2524
124 Ga0466971_0035512 3300044719 Bacteria 2235
125 Ga0466968_0007872 3300044735 Bacteria 4067
126 Ga0466959_0148036 3300045049 Bacteria 1656
127 Ga0466967_0007809 3300045976 Bacteria 7772
128 Ga0466967_0009551 3300045976 Bacteria 7206
129 Ga0466967_0020896 3300045976 Bacteria 5304
130 Ga0495603_0010555 3300046455 Bacteria 5593
131 Ga0495651_0045657 3300046462 Bacteria 3394
132 Ga0495580_0009523 3300046472 Bacteria 7636
133 Ga0495580_0011024 3300046472 Bacteria 7005
134 Ga0495580_0015900 3300046472 Bacteria 5664
135 Ga0495580_0124106 3300046472 Bacteria 1792
136 Ga0495582_0016829 3300046473 Bacteria 4004
137 Ga0495618_0002855 3300046514 Bacteria 10942
138 Ga0495633_0056516 3300046558 Bacteria 1844
139 Ga0495658_0033024 3300046683 Bacteria 2831
140 Ga0495674_0136932 3300047319 Bacteria 2060
141 Ga0495674_0146637 3300047319 Bacteria 1981
142 Ga0495674_0221297 3300047319 Bacteria 1564
143 Ga0495684_0022645 3300047471 Bacteria 4832
144 Ga0496106_0016049 3300048909 Bacteria 5537
145 Ga0496107_0009909 3300048910 Bacteria 6612
146 Ga0496112_0011323 3300048915 Bacteria 8139
147 Ga0496112_0251873 3300048915 Bacteria 1717
148 Ga0501076_0139242 3300049592 Bacteria 1971
149 Ga0501081_0086494 3300049743 Bacteria 2201
150 Ga0501045_0114454 3300049824 Bacteria 2000
151 Ga0495601_0068633 3300053077 Bacteria 2260
152 Ga0495612_0030722 3300053078 Bacteria 2164
153 Ga0500568_0000602 3300053139 Bacteria 26139
154 Ga0501084_0074037 3300054114 Bacteria 2852
155 Ga0501082_0063281 3300060353 Bacteria 3186
156 Ga0530510_0054398 3300061734 Bacteria 2892
157 Ga0213872_10000856
158 Ga0070658_10025064
159 Ga0070658_10036655
160 Ga0070658_10135919
161 Ga0070660_100009531
162 Ga0070660_100009535
163 Ga0070660_100039818
164 Ga0070661_100022646
165 Ga0070661_100181853
166 Ga0070671_100185479
167 Ga0070659_100050714
168 Ga0070714_100002387
169 Ga0070714_100015381
170 Ga0070714_100019692
171 Ga0070714_100030951
172 Ga0070714_100152195
173 Ga0070713_100046797
174 Ga0070681_10091263
175 Ga0070681_10118363
176 Ga0070679_100250689
177 Ga0068853_100161281
178 Ga0070695_100000023
179 Ga0068855_100003521
180 Ga0068855_100017384
181 Ga0068855_100156713
182 Ga0070664_100146155
183 Ga0068857_100017543
184 Ga0068856_100116347
185 Ga0068856_100119299
186 Ga0068864_100068756
187 Ga0068863_100004733
188 Ga0068863_100047975
189 Ga0068858_100138898
190 Ga0081455_10007768
191 Ga0081538_10000331
192 Ga0097621_100040231
193 Ga0068871_100143808
194 Ga0105240_10001402
195 Ga0105240_10012636
196 Ga0105240_10353431
197 Ga0114129_10357821
198 Ga0105241_10034563
199 Ga0105242_10016576
200 Ga0105242_10071723
201 Ga0105237_10003613
202 Ga0105237_10118438
203 Ga0105237_10172515
204 Ga0105238_10046163
205 Ga0105239_10005691
206 Ga0157370_10002230
207 Ga0157370_10008670
208 Ga0157370_10097035
209 Ga0157369_10002154
210 Ga0157369_10002618
211 Ga0157374_10135138
212 Ga0157374_10195117
213 Ga0163162_10001773
214 Ga0157375_10022708
215 Ga0163163_10001078
216 Ga0206356_11449565
217 Ga0206353_10043950
218 Ga0213875_10000065
219 Ga0213875_10007631
220 Ga0207705_10019057
221 Ga0207705_10184357
222 Ga0207707_10024008
223 Ga0207695_10020627
224 Ga0207695_10040962
225 Ga0207695_10216088
226 Ga0207663_10140535
227 Ga0207657_10004222
228 Ga0207657_10019540
229 Ga0207657_10022752
230 Ga0207649_10016007
231 Ga0207652_10116444
232 Ga0207652_10164034
233 Ga0207646_10206017
234 Ga0207646_10212373
235 Ga0207700_10012976
236 Ga0207664_10044523
237 Ga0207664_10059298
238 Ga0207664_10081037
239 Ga0207664_10238077
240 Ga0207644_10064844
241 Ga0207686_10013626
242 Ga0207686_10024107
243 Ga0207686_10078629
244 Ga0207711_10111732
245 Ga0207689_10021053
246 Ga0207667_10007855
247 Ga0207667_10120558
248 Ga0207702_10033731
249 Ga0207702_10108650
250 Ga0207641_10012733
251 Ga0207676_10090028
252 Ga0207674_10008609
253 Ga0207698_10030137
254 Ga0268266_10040880
255 Ga0265338_10011502
256 Ga0373926_0006501
257 Ga0373953_0007945
258 Ga0373935_0031224
259 Ga0373927_0004677
260 Ga0373927_0023898
261 Ga0373933_0035467
262 Ga0373937_0004848
263 Ga0373937_0054465
264 Ga0373937_0127533
265 Ga0373925_0009926
266 Ga0395900_0035023
267 Ga0395898_0041504
268 Ga0436364_0828992
269 Ga0436364_1214913
270 Ga0436360_0719696
271 Ga0436361_0381832
272 Ga0451853_1044213
273 Ga0466966_0011925
274 Ga0466961_0031246
275 Ga0466963_0001526
276 Ga0466963_0023530
277 Ga0466963_0077711
278 Ga0466964_0044768
279 Ga0466971_0027976
280 Ga0466971_0035512
281 Ga0466968_0007872
282 Ga0466959_0148036
283 Ga0466967_0007809
284 Ga0466967_0009551
285 Ga0466967_0020896
286 Ga0495603_0010555
287 Ga0495651_0045657
288 Ga0495580_0009523
289 Ga0495580_0011024
290 Ga0495580_0015900
291 Ga0495580_0124106
292 Ga0495582_0016829
293 Ga0495618_0002855
294 Ga0495633_0056516
295 Ga0495658_0033024
296 Ga0495674_0136932
297 Ga0495674_0146637
298 Ga0495674_0221297
299 Ga0495684_0022645
300 Ga0496106_0016049
301 Ga0496107_0009909
302 Ga0496112_0011323
303 Ga0496112_0251873
304 Ga0501076_0139242
305 Ga0501081_0086494
306 Ga0501045_0114454
307 Ga0495601_0068633
308 Ga0495612_0030722
309 Ga0500568_0000602
310 Ga0501084_0074037
311 Ga0501082_0063281
312 Ga0530510_0054398

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00289

Biotin_carb_N

Biotin carboxylase, N-terminal domain

49

158

0.99

PF02785

Biotin_carb_C

Biotin carboxylase C-terminal domain

380

487

0.99

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

163

368

0.97

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

176

337

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ks8-assembly1.cif.gz_B crystal structure of two-subunit pyruvate carboxylase from methylobacillus flagellatus 0.9688 1 438
5mlk-assembly1.cif.gz_B biotin dependent carboxylase acca3 dimer from mycobacterium tuberculosis (rv3285) 0.9682 2 434
3jzf-assembly1.cif.gz_A crystal structure of biotin carboxylase from e. coli in complex with benzimidazoles series 0.9679 1 435
3g8d-assembly1.cif.gz_A crystal structure of the biotin carboxylase subunit, e296a mutant, of acetyl-coa carboxylase from escherichia coli 0.9677 1 435
3u9s-assembly1.cif.gz_K crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase (mcc) 750 kd holoenzyme, coa complex 0.9672 1 440
ID Description Score Start End Superfamily
af_A0A2R8PV58_229_474_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9786 196 435 3.30.470.20
5mlkB02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9752 195 434 3.30.470.20
3u9tA02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9683 85 440 3.30.470.20
af_P9WPQ3_1_451_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.968 1 439 3.30.470.20
2w6pB02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9644 193 435 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A6N6KPX9-F1-model_v4 Biotin carboxylase 0.9923 334 435 GO:0005524
GO:0016874
AF-A0A6V8D708-F1-model_v4 Acetyl-CoA carboxylase biotin carboxylase subunit (EC 6.4.1.2) 0.9923 343 435 GO:0003989
GO:0005524
AF-A0A5C8MNT5-F1-model_v4 Biotin carboxylase 0.9907 328 435 GO:0005524
GO:0016874
AF-A0A350KN50-F1-model_v4 biotin carboxylase (EC 6.3.4.14) 0.99 340 435 GO:0003989
GO:0005524
AF-A0A4P5V8G0-F1-model_v4 biotin carboxylase (EC 6.3.4.14) 0.9895 323 436 GO:0005524
GO:0016874

Map