F224285

General Info

Members Datasets Scaffolds Average Seq Length
156 106 312 208

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100083040|Ga0070706_1000830402
Length 209
Sequence MVRIRKMIHEILPVGVLQCNCSIFGDEQTREAIVIDPGDNIPEILVIVKRHGLTVKAIVITHAHIDHIGGAHKLRAATGAPVYMNRNDTLLRDSLDLQAQWLGIETPEIVTIDTPVREGDKLTLGGHTQGSISLWIPAENKLIAGDTLFRDSIGRTDLPGGDGRQILRSIHDKLLPLPDYVIVIPGHGETTTIGREKRFNYFLQGLSRS

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
52 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
55 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
57 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
59 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
60 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
61 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
62 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
66 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
72 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
76 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
77 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
78 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
79 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
83 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
103 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
104 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
105 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
106 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.36
Metatranscriptomes 0.64
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.64
Nodule 0
Rhizoplane 0
Rhizosphere 95.51
Stem 0
Stem Tuber 0
Unclassified 17.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100083040 3300005467 Bacteria 2968
2 Ga0070658_10028432 3300005327 Bacteria 4488
3 Ga0070683_100000012 3300005329 Bacteria 274646
4 Ga0070683_100000643 3300005329 Bacteria 25151
5 Ga0070683_100013387 3300005329 Bacteria 7153
6 Ga0070680_100027449 3300005336 Bacteria 4559
7 Ga0070680_100578523 3300005336 Bacteria 963
8 Ga0070660_100032493 3300005339 Bacteria 3927
9 Ga0070660_100058011 3300005339 Bacteria 3001
10 Ga0070709_10174924 3300005434 Bacteria 1503
11 Ga0070713_100203511 3300005436 Unclassified 1789
12 Ga0070711_100190740 3300005439 Bacteria 1575
13 Ga0070681_10034928 3300005458 Bacteria 5049
14 Ga0070681_10091761 3300005458 Unclassified 2987
15 Ga0070679_100000672 3300005530 Bacteria 29143
16 Ga0070684_100000013 3300005535 Bacteria 167281
17 Ga0070684_100001641 3300005535 Bacteria 16208
18 Ga0070665_100922869 3300005548 Bacteria 886
19 Ga0068855_100070476 3300005563 Bacteria 4067
20 Ga0068855_100332641 3300005563 Bacteria 1676
21 Ga0068855_101300528 3300005563 Bacteria 753
22 Ga0068852_100315198 3300005616 Bacteria 1517
23 Ga0068866_10538726 3300005718 Unclassified 779
24 Ga0068858_100372781 3300005842 Bacteria 1369
25 Ga0070717_10020752 3300006028 Bacteria 5173
26 Ga0070715_10077157 3300006163 Bacteria 1503
27 Ga0070712_100001479 3300006175 Bacteria 14332
28 Ga0097621_100095571 3300006237 Unclassified 2493
29 Ga0097621_100491454 3300006237 Bacteria 1111
30 Ga0068871_100112431 3300006358 Unclassified 2292
31 Ga0075436_100004501 3300006914 Bacteria 9561
32 Ga0105240_10009269 3300009093 Bacteria 13960
33 Ga0105240_10029213 3300009093 Bacteria 7189
34 Ga0105240_10529279 3300009093 Bacteria 1307
35 Ga0105240_10947144 3300009093 Bacteria 924
36 Ga0111539_10545486 3300009094 Bacteria 1351
37 Ga0105245_10382818 3300009098 Bacteria 1401
38 Ga0105247_10022691 3300009101 Unclassified 3780
39 Ga0105241_10198245 3300009174 Bacteria 1675
40 Ga0105248_10623676 3300009177 Bacteria 1217
41 Ga0105248_10684828 3300009177 Bacteria 1157
42 Ga0105237_10002571 3300009545 Bacteria 22389
43 Ga0105237_10475103 3300009545 Bacteria 1256
44 Ga0105238_10003090 3300009551 Bacteria 16598
45 Ga0105238_10025720 3300009551 Bacteria 6002
46 Ga0105239_10016617 3300010375 Bacteria 8136
47 Ga0157371_10084448 3300013102 Bacteria 2249
48 Ga0157369_10001771 3300013105 Bacteria 26144
49 Ga0157369_10126942 3300013105 Bacteria 2704
50 Ga0157369_10230671 3300013105 Bacteria 1936
51 Ga0157369_10342709 3300013105 Bacteria 1552
52 Ga0163162_10012290 3300013306 Bacteria 8359
53 Ga0157372_10002896 3300013307 Bacteria 18559
54 Ga0157372_10282815 3300013307 Bacteria 1929
55 Ga0157372_10980407 3300013307 Bacteria 979
56 Ga0163163_10022898 3300014325 Bacteria 5922
57 Ga0207705_10017744 3300025909 Bacteria 5090
58 Ga0207684_10507656 3300025910 Bacteria 1033
59 Ga0207707_10021820 3300025912 Bacteria 5596
60 Ga0207707_10067733 3300025912 Bacteria 3110
61 Ga0207707_10243573 3300025912 Bacteria 1563
62 Ga0207695_10652689 3300025913 Bacteria 933
63 Ga0207693_10002288 3300025915 Bacteria 16657
64 Ga0207663_10086472 3300025916 Bacteria 2068
65 Ga0207660_10459062 3300025917 Bacteria 1031
66 Ga0207657_10085495 3300025919 Bacteria 2642
67 Ga0207694_10001187 3300025924 Bacteria 22555
68 Ga0207694_10372861 3300025924 Bacteria 1184
69 Ga0207700_10063164 3300025928 Bacteria 2815
70 Ga0207665_10585412 3300025939 Bacteria 870
71 Ga0207661_10000034 3300025944 Bacteria 154138
72 Ga0207667_10140015 3300025949 Bacteria 2491
73 Ga0207667_10374009 3300025949 Bacteria 1452
74 Ga0207674_10639880 3300026116 Bacteria 1027
75 Ga0265325_10163658 3300031241 Bacteria 1045
76 Ga0265325_10166030 3300031241 Bacteria 1036
77 Ga0265331_10065156 3300031250 Unclassified 1714
78 Ga0265331_10086268 3300031250 Bacteria 1454
79 Ga0265316_10003267 3300031344 Bacteria 16459
80 Ga0265316_10008013 3300031344 Bacteria 9864
81 Ga0265316_10037987 3300031344 Bacteria 3882
82 Ga0265316_10070710 3300031344 Bacteria 2691
83 Ga0265316_10180210 3300031344 Bacteria 1573
84 Ga0265316_10289741 3300031344 Bacteria 1195
85 Ga0265342_10063437 3300031712 Bacteria 2172
86 Ga0316593_10050369 3300032168 Unclassified 1405
87 Ga0373934_0040594 3300035086 Unclassified 1836
88 Ga0373923_0037550 3300035111 Bacteria 1982
89 Ga0373945_0037398 3300035116 Unclassified 1742
90 Ga0373953_0040920 3300035117 Unclassified 1843
91 Ga0373957_0026061 3300035120 Bacteria 2112
92 Ga0373943_0020306 3300035170 Unclassified 3061
93 Ga0373943_0030604 3300035170 Unclassified 2549
94 Ga0373931_0325992 3300035691 Bacteria 955
95 Ga0373935_0020473 3300035692 Bacteria 4044
96 Ga0373927_0001190 3300035695 Bacteria 19749
97 Ga0373927_0004791 3300035695 Bacteria 9416
98 Ga0373927_0049115 3300035695 Bacteria 2729
99 Ga0373927_0273263 3300035695 Unclassified 1111
100 Ga0373933_0053494 3300035724 Unclassified 2418
101 Ga0373933_0403054 3300035724 Bacteria 892
102 Ga0373947_0003002 3300035725 Bacteria 10062
103 Ga0373947_0010146 3300035725 Bacteria 5409
104 Ga0373937_0018077 3300036401 Bacteria 6288
105 Ga0373937_0029821 3300036401 Bacteria 4941
106 Ga0373937_0275616 3300036401 Unclassified 1588
107 Ga0373937_0653183 3300036401 Bacteria 997
108 Ga0373937_0654712 3300036401 Bacteria 996
109 Ga0373925_0000170 3300037068 Bacteria 70413
110 Ga0373925_0012121 3300037068 Bacteria 6239
111 Ga0373925_0460796 3300037068 Bacteria 1042
112 Ga0395900_0275908 3300037418 Unclassified 1675
113 Ga0436364_0073959 3300037853 Bacteria 8686
114 Ga0436364_0385342 3300037853 Bacteria 7311
115 Ga0436364_0537548 3300037853 Bacteria 2139
116 Ga0436364_1433424 3300037853 Bacteria 1166
117 Ga0436365_0912954 3300039437 Bacteria 2961
118 Ga0436365_0942040 3300039437 Bacteria 4615
119 Ga0439448_0013230 3300042005 Bacteria 2477
120 Ga0451576_0590389 3300045051 Bacteria 1167
121 Ga0495592_0229579 3300046454 Unclassified 1236
122 Ga0495651_0015196 3300046462 Bacteria 5950
123 Ga0495580_0003504 3300046472 Bacteria 13341
124 Ga0495580_0282258 3300046472 Bacteria 1133
125 Ga0495582_0499695 3300046473 Unclassified 703
126 Ga0495662_0004226 3300046476 Bacteria 7231
127 Ga0495662_0058611 3300046476 Bacteria 1860
128 Ga0495594_0418240 3300046499 Unclassified 762
129 Ga0495628_0030132 3300046516 Bacteria 4394
130 Ga0495652_0259205 3300046529 Unclassified 1284
131 Ga0495665_0152672 3300046531 Unclassified 1205
132 Ga0495640_0024789 3300046533 Bacteria 4359
133 Ga0495587_0040225 3300046536 Bacteria 2795
134 Ga0495645_0051115 3300046543 Bacteria 3007
135 Ga0495667_0004227 3300046559 Bacteria 9678
136 Ga0495635_0008621 3300046663 Bacteria 7119
137 Ga0495613_0021917 3300046689 Bacteria 4763
138 Ga0495624_0156813 3300046690 Unclassified 1391
139 Ga0495600_0064623 3300046809 Bacteria 2392
140 Ga0495581_0332754 3300047315 Unclassified 887
141 Ga0495604_0118682 3300047317 Bacteria 1917
142 Ga0495674_0036216 3300047319 Bacteria 4444
143 Ga0495680_0081799 3300047322 Bacteria 2437
144 Ga0495675_0057451 3300047444 Bacteria 2467
145 Ga0495684_0017424 3300047471 Bacteria 5530
146 Ga0495602_0119200 3300048088 Bacteria 2127
147 Ga0495602_0424872 3300048088 Bacteria 943
148 Ga0495614_0239565 3300048089 Unclassified 828
149 nmdc:mga05p37_30660_c1 3300050507 Bacteria 6561
150 nmdc:mga06r32_22576_c1 3300050510 Bacteria 5819
151 nmdc:mga08y16_396824_c1 3300050511 Unclassified 1412
152 nmdc:mga08x19_3879_c1 3300050514 Bacteria 8899
153 Ga0495601_0151348 3300053077 Bacteria 1515
154 Ga0495612_0006816 3300053078 Unclassified 4679
155 Ga0500568_0001041 3300053139 Bacteria 18938
156 Ga0501082_0000165 3300060353 Bacteria 56662
157 Ga0070706_100083040
158 Ga0070658_10028432
159 Ga0070683_100000012
160 Ga0070683_100000643
161 Ga0070683_100013387
162 Ga0070680_100027449
163 Ga0070680_100578523
164 Ga0070660_100032493
165 Ga0070660_100058011
166 Ga0070709_10174924
167 Ga0070713_100203511
168 Ga0070711_100190740
169 Ga0070681_10034928
170 Ga0070681_10091761
171 Ga0070679_100000672
172 Ga0070684_100000013
173 Ga0070684_100001641
174 Ga0070665_100922869
175 Ga0068855_100070476
176 Ga0068855_100332641
177 Ga0068855_101300528
178 Ga0068852_100315198
179 Ga0068866_10538726
180 Ga0068858_100372781
181 Ga0070717_10020752
182 Ga0070715_10077157
183 Ga0070712_100001479
184 Ga0097621_100095571
185 Ga0097621_100491454
186 Ga0068871_100112431
187 Ga0075436_100004501
188 Ga0105240_10009269
189 Ga0105240_10029213
190 Ga0105240_10529279
191 Ga0105240_10947144
192 Ga0111539_10545486
193 Ga0105245_10382818
194 Ga0105247_10022691
195 Ga0105241_10198245
196 Ga0105248_10623676
197 Ga0105248_10684828
198 Ga0105237_10002571
199 Ga0105237_10475103
200 Ga0105238_10003090
201 Ga0105238_10025720
202 Ga0105239_10016617
203 Ga0157371_10084448
204 Ga0157369_10001771
205 Ga0157369_10126942
206 Ga0157369_10230671
207 Ga0157369_10342709
208 Ga0163162_10012290
209 Ga0157372_10002896
210 Ga0157372_10282815
211 Ga0157372_10980407
212 Ga0163163_10022898
213 Ga0207705_10017744
214 Ga0207684_10507656
215 Ga0207707_10021820
216 Ga0207707_10067733
217 Ga0207707_10243573
218 Ga0207695_10652689
219 Ga0207693_10002288
220 Ga0207663_10086472
221 Ga0207660_10459062
222 Ga0207657_10085495
223 Ga0207694_10001187
224 Ga0207694_10372861
225 Ga0207700_10063164
226 Ga0207665_10585412
227 Ga0207661_10000034
228 Ga0207667_10140015
229 Ga0207667_10374009
230 Ga0207674_10639880
231 Ga0265325_10163658
232 Ga0265325_10166030
233 Ga0265331_10065156
234 Ga0265331_10086268
235 Ga0265316_10003267
236 Ga0265316_10008013
237 Ga0265316_10037987
238 Ga0265316_10070710
239 Ga0265316_10180210
240 Ga0265316_10289741
241 Ga0265342_10063437
242 Ga0316593_10050369
243 Ga0373934_0040594
244 Ga0373923_0037550
245 Ga0373945_0037398
246 Ga0373953_0040920
247 Ga0373957_0026061
248 Ga0373943_0020306
249 Ga0373943_0030604
250 Ga0373931_0325992
251 Ga0373935_0020473
252 Ga0373927_0001190
253 Ga0373927_0004791
254 Ga0373927_0049115
255 Ga0373927_0273263
256 Ga0373933_0053494
257 Ga0373933_0403054
258 Ga0373947_0003002
259 Ga0373947_0010146
260 Ga0373937_0018077
261 Ga0373937_0029821
262 Ga0373937_0275616
263 Ga0373937_0653183
264 Ga0373937_0654712
265 Ga0373925_0000170
266 Ga0373925_0012121
267 Ga0373925_0460796
268 Ga0395900_0275908
269 Ga0436364_0073959
270 Ga0436364_0385342
271 Ga0436364_0537548
272 Ga0436364_1433424
273 Ga0436365_0912954
274 Ga0436365_0942040
275 Ga0439448_0013230
276 Ga0451576_0590389
277 Ga0495592_0229579
278 Ga0495651_0015196
279 Ga0495580_0003504
280 Ga0495580_0282258
281 Ga0495582_0499695
282 Ga0495662_0004226
283 Ga0495662_0058611
284 Ga0495594_0418240
285 Ga0495628_0030132
286 Ga0495652_0259205
287 Ga0495665_0152672
288 Ga0495640_0024789
289 Ga0495587_0040225
290 Ga0495645_0051115
291 Ga0495667_0004227
292 Ga0495635_0008621
293 Ga0495613_0021917
294 Ga0495624_0156813
295 Ga0495600_0064623
296 Ga0495581_0332754
297 Ga0495604_0118682
298 Ga0495674_0036216
299 Ga0495680_0081799
300 Ga0495675_0057451
301 Ga0495684_0017424
302 Ga0495602_0119200
303 Ga0495602_0424872
304 Ga0495614_0239565
305 nmdc:mga05p37_30660_c1
306 nmdc:mga06r32_22576_c1
307 nmdc:mga08y16_396824_c1
308 nmdc:mga08x19_3879_c1
309 Ga0495601_0151348
310 Ga0495612_0006816
311 Ga0500568_0001041
312 Ga0501082_0000165

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

14

187

0.89

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

31

132

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xf4-assembly1.cif.gz_A-2 crystal structure of salmonella enterica serovar typhimurium ycbl 0.9396 1 208
2xf4-assembly1.cif.gz_A-2 crystal structure of salmonella enterica serovar typhimurium ycbl 0.9353 1 208
7ev5-assembly1.cif.gz_A crystal structure of bleg-1 b3 metallo-beta-lactamase 0.9028 2 207
2zzi-assembly1.cif.gz_A crystal structure of ttha1623 in a di-iron-bound form 0.9012 4 207
2zzi-assembly1.cif.gz_A crystal structure of ttha1623 in a di-iron-bound form 0.8927 4 207
ID Description Score Start End Superfamily
2xf4A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9396 1 208 3.60.15.10
2xf4A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9353 1 208 3.60.15.10
2zwrB00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9029 1 207 3.60.15.10
af_Q86PD3_43_273_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8884 2 207 3.60.15.10
af_Q2FY29_1_207_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8773 1 207 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A2V9RBH2-F1-model_v4 MBL fold metallo-hydrolase 0.9675 1 152 GO:0016787
AF-A0A2V8X3H5-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9664 2 141 GO:0016787
AF-A0A2V9RBH2-F1-model_v4 MBL fold metallo-hydrolase 0.9614 1 152 GO:0016787
AF-A0A7Y5VHP5-F1-model_v4 MBL fold metallo-hydrolase 0.9565 1 208 GO:0016787
AF-A0A5B9EFV3-F1-model_v4 MBL fold metallo-hydrolase 0.9561 1 208 GO:0016787

Map