F222114

General Info

Members Datasets Scaffolds Average Seq Length
155 120 310 371

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10055414|Ga0111539_100554143
Length 429
Sequence VAVAVRREHAVAAPRPSGSPAKGRRPLTRQTLGENPSESRLLIVTRTPPRYAVCFVTDPELAKTPLYDEHVALGARIVPFAGWLMPVQYKGISAEHQAVRERAGLFDVCHMGELVLGGAEAANVVDRLVTNDLSKIADGQAMYTCCCNDGGTILDDLIIYKRAKNDVLVVCNASNRAKISAHFRAAAQGRCEFADVSDKTALLALQGPKAFDVLAAAEPKLAGLSQKLGRFRLGSFELAGKRVTLARTGYTGEDGVELFCAWADAPALWRGLLEAGKASGIEPVGLGARDTLRLEARLSLYGNDIDETTNPLEAGLGWTVKLDKPDFAGKAALEEVKRDGTPRKLVGFEMTGRGIARHGYPLLDLAGQACGVCTSGAPSPTLGKNIGLGYLPAALSAVGSEFLVDCRGKHVGAKVVKTPFYARPRSQSE

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
56 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
57 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
58 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
59 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
60 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
77 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
81 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
82 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
83 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
84 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
85 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
92 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
95 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
119 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 2.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.29
Nodule 0
Rhizoplane 2.58
Rhizosphere 90.97
Stem 0
Stem Tuber 0
Unclassified 3.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10055414 3300009094 Bacteria 4712
2 rootH1_10064349 3300003323 Bacteria 1677
3 Ga0070658_10006946 3300005327 Bacteria 9146
4 Ga0070658_10052049 3300005327 Bacteria 3320
5 Ga0070683_100000398 3300005329 Bacteria 30072
6 Ga0070670_100116176 3300005331 Bacteria 2307
7 Ga0070666_10000390 3300005335 Bacteria 27614
8 Ga0070680_100054743 3300005336 Bacteria 3258
9 Ga0070689_100001205 3300005340 Bacteria 16370
10 Ga0070709_10191996 3300005434 Bacteria 1441
11 Ga0070714_100024096 3300005435 Bacteria 5007
12 Ga0070710_10067906 3300005437 Bacteria 2047
13 Ga0070705_100007940 3300005440 Bacteria 5244
14 Ga0070694_100002012 3300005444 Bacteria 12073
15 Ga0070708_100001664 3300005445 Bacteria 17063
16 Ga0070681_10035547 3300005458 Bacteria 5005
17 Ga0068867_100036803 3300005459 Bacteria 3554
18 Ga0070706_100030582 3300005467 Bacteria 4963
19 Ga0070698_100005912 3300005471 Bacteria 13345
20 Ga0070699_100166769 3300005518 Bacteria 1951
21 Ga0070679_100017871 3300005530 Bacteria 6868
22 Ga0070679_100119167 3300005530 Bacteria 2624
23 Ga0070679_100151789 3300005530 Bacteria 2293
24 Ga0070679_100174869 3300005530 Bacteria 2119
25 Ga0070697_100000426 3300005536 Bacteria 32337
26 Ga0070697_100063005 3300005536 Bacteria 3028
27 Ga0070695_100000396 3300005545 Bacteria 22630
28 Ga0070696_100009407 3300005546 Bacteria 6544
29 Ga0070696_100024065 3300005546 Bacteria 4139
30 Ga0070696_100032105 3300005546 Bacteria 3602
31 Ga0070693_100000032 3300005547 Bacteria 52928
32 Ga0070704_100012155 3300005549 Bacteria 5312
33 Ga0068855_100000059 3300005563 Bacteria 134064
34 Ga0068856_100069379 3300005614 Bacteria 3485
35 Ga0068856_100376332 3300005614 Bacteria 1439
36 Ga0068859_100000008 3300005617 Bacteria 383750
37 Ga0068859_100075584 3300005617 Bacteria 3409
38 Ga0070715_10049944 3300006163 Unclassified 1794
39 Ga0075366_10029015 3300006195 Bacteria 3249
40 Ga0068871_100037789 3300006358 Bacteria 3852
41 Ga0075433_10211302 3300006852 Bacteria 1724
42 Ga0075429_100025425 3300006880 Bacteria 5139
43 Ga0075436_100042243 3300006914 Bacteria 3144
44 Ga0097620_100000008 3300006931 Bacteria 383750
45 Ga0097620_100075584 3300006931 Bacteria 3409
46 Ga0099794_10006987 3300007265 Unclassified 4605
47 Ga0099794_10009033 3300007265 Bacteria 4164
48 Ga0099794_10027995 3300007265 Bacteria 2618
49 Ga0105240_10044693 3300009093 Bacteria 5625
50 Ga0105245_10195614 3300009098 Bacteria 1939
51 Ga0105242_10085316 3300009176 Bacteria 2648
52 Ga0105248_10191082 3300009177 Bacteria 2307
53 Ga0105238_10201344 3300009551 Bacteria 1966
54 Ga0157376_10044363 3300014969 Bacteria 3655
55 Ga0207699_10216315 3300025906 Bacteria 1306
56 Ga0207684_10029617 3300025910 Bacteria 4660
57 Ga0207684_10179948 3300025910 Bacteria 1823
58 Ga0207671_10015460 3300025914 Bacteria 5972
59 Ga0207693_10009014 3300025915 Bacteria 8141
60 Ga0207652_10012213 3300025921 Bacteria 6940
61 Ga0207652_10023693 3300025921 Bacteria 5088
62 Ga0207652_10245647 3300025921 Bacteria 1614
63 Ga0207694_10080587 3300025924 Bacteria 2555
64 Ga0207670_10048500 3300025936 Bacteria 2835
65 Ga0207667_10001382 3300025949 Bacteria 30435
66 Ga0207702_10194754 3300026078 Bacteria 1875
67 Ga0207648_10053052 3300026089 Bacteria 3545
68 Ga0209588_1003071 3300027671 Unclassified 4603
69 Ga0207428_10057128 3300027907 Bacteria 3098
70 Ga0265354_1000096 3300028016 Bacteria 15122
71 Ga0265354_1000815 3300028016 Bacteria 5066
72 Ga0265337_1005972 3300028556 Bacteria 4755
73 Ga0265319_1000070 3300028563 Bacteria 81633
74 Ga0265334_10003028 3300028573 Bacteria 7676
75 Ga0265318_10000184 3300028577 Bacteria 55248
76 Ga0265770_1000450 3300030878 Bacteria 5654
77 Ga0265765_1000436 3300030879 Bacteria 3235
78 Ga0265760_10002377 3300031090 Bacteria 5501
79 Ga0265760_10006757 3300031090 Bacteria 3284
80 Ga0265330_10000830 3300031235 Bacteria 19421
81 Ga0265332_10000448 3300031238 Bacteria 28960
82 Ga0265320_10000265 3300031240 Bacteria 43333
83 Ga0265320_10003552 3300031240 Bacteria 10431
84 Ga0265320_10028367 3300031240 Bacteria 2907
85 Ga0265325_10001067 3300031241 Bacteria 19758
86 Ga0265329_10000122 3300031242 Bacteria 36943
87 Ga0265340_10000305 3300031247 Bacteria 25783
88 Ga0265340_10038813 3300031247 Bacteria 2353
89 Ga0265339_10002179 3300031249 Bacteria 14202
90 Ga0265331_10002687 3300031250 Bacteria 11855
91 Ga0265331_10060177 3300031250 Bacteria 1795
92 Ga0265316_10001660 3300031344 Bacteria 23679
93 Ga0265316_10004178 3300031344 Bacteria 14427
94 Ga0265316_10008894 3300031344 Bacteria 9272
95 Ga0265316_10053888 3300031344 Unclassified 3150
96 Ga0265313_10000078 3300031595 Bacteria 95571
97 Ga0265313_10005610 3300031595 Bacteria 9178
98 Ga0307508_10004319 3300031616 Bacteria 13923
99 Ga0265314_10002370 3300031711 Bacteria 19421
100 Ga0265314_10040651 3300031711 Bacteria 3336
101 Ga0265342_10000330 3300031712 Bacteria 53170
102 Ga0316578_10092171 3300031728 Bacteria 1811
103 Ga0307516_10004907 3300031730 Bacteria 16270
104 Ga0307406_10028753 3300031901 Bacteria 3360
105 Ga0307415_100024068 3300032126 Bacteria 3795
106 Ga0316212_1002518 3300033547 Unclassified 2611
107 Ga0373934_0002935 3300035086 Bacteria 6241
108 Ga0373953_0022356 3300035117 Bacteria 2384
109 Ga0373954_0000086 3300035118 Bacteria 31796
110 Ga0373954_0027941 3300035118 Bacteria 2592
111 Ga0373954_0029538 3300035118 Bacteria 2525
112 Ga0373956_0000871 3300035119 Bacteria 12543
113 Ga0373957_0002020 3300035120 Bacteria 5676
114 Ga0373927_0004425 3300035695 Bacteria 9840
115 Ga0373933_0000773 3300035724 Bacteria 19501
116 Ga0373947_0000218 3300035725 Bacteria 32251
117 Ga0373947_0202976 3300035725 Bacteria 1298
118 Ga0373937_0002950 3300036401 Bacteria 14235
119 Ga0373937_0007356 3300036401 Bacteria 9534
120 Ga0373937_0058101 3300036401 Bacteria 3554
121 Ga0373925_0000238 3300037068 Bacteria 58085
122 Ga0373925_0059380 3300037068 Bacteria 2869
123 Ga0373925_0477090 3300037068 Bacteria 1023
124 Ga0400489_75598 3300039093 Bacteria 6119
125 Ga0400487_54358 3300039110 Bacteria 2097
126 Ga0436365_0849090 3300039437 Bacteria 2161
127 Ga0451807_0193603 3300041486 Bacteria 1373
128 Ga0451807_1119060 3300041486 Bacteria 6528
129 Ga0451837_1246239 3300041494 Bacteria 1551
130 Ga0451577_0004976 3300042876 Bacteria 13787
131 Ga0466965_0117342 3300044683 Bacteria 1372
132 Ga0453684_0010290 3300044712 Bacteria 16017
133 Ga0466960_0016289 3300044901 Bacteria 3221
134 Ga0495592_0028998 3300046454 Bacteria 4190
135 Ga0495651_0298337 3300046462 Bacteria 1082
136 Ga0495580_0029568 3300046472 Bacteria 3975
137 Ga0495608_0012009 3300046511 Bacteria 6022
138 Ga0495587_0004144 3300046536 Bacteria 9593
139 Ga0495587_0011883 3300046536 Bacteria 5504
140 Ga0495657_0092306 3300046675 Bacteria 1940
141 Ga0495623_0115016 3300046679 Bacteria 1626
142 Ga0495613_0026870 3300046689 Bacteria 4285
143 Ga0495624_0027850 3300046690 Bacteria 3696
144 Ga0495604_0000307 3300047317 Bacteria 43900
145 Ga0495674_0110022 3300047319 Bacteria 2337
146 Ga0495680_0025508 3300047322 Bacteria 4890
147 Ga0495684_0025764 3300047471 Bacteria 4519
148 Ga0495602_0038677 3300048088 Bacteria 4407
149 Ga0496104_0063092 3300048907 Bacteria 3514
150 Ga0496114_0165489 3300048917 Bacteria 1925
151 Ga0501068_0072078 3300049584 Bacteria 2109
152 Ga0501077_0051178 3300049593 Bacteria 2625
153 nmdc:mga08y16_4027_c1 3300050511 Bacteria 15329
154 nmdc:mga08x19_47958_c1 3300050514 Bacteria 2735
155 Ga0500616_0022567 3300053153 Bacteria 3513
156 Ga0111539_10055414
157 rootH1_10064349
158 Ga0070658_10006946
159 Ga0070658_10052049
160 Ga0070683_100000398
161 Ga0070670_100116176
162 Ga0070666_10000390
163 Ga0070680_100054743
164 Ga0070689_100001205
165 Ga0070709_10191996
166 Ga0070714_100024096
167 Ga0070710_10067906
168 Ga0070705_100007940
169 Ga0070694_100002012
170 Ga0070708_100001664
171 Ga0070681_10035547
172 Ga0068867_100036803
173 Ga0070706_100030582
174 Ga0070698_100005912
175 Ga0070699_100166769
176 Ga0070679_100017871
177 Ga0070679_100119167
178 Ga0070679_100151789
179 Ga0070679_100174869
180 Ga0070697_100000426
181 Ga0070697_100063005
182 Ga0070695_100000396
183 Ga0070696_100009407
184 Ga0070696_100024065
185 Ga0070696_100032105
186 Ga0070693_100000032
187 Ga0070704_100012155
188 Ga0068855_100000059
189 Ga0068856_100069379
190 Ga0068856_100376332
191 Ga0068859_100000008
192 Ga0068859_100075584
193 Ga0070715_10049944
194 Ga0075366_10029015
195 Ga0068871_100037789
196 Ga0075433_10211302
197 Ga0075429_100025425
198 Ga0075436_100042243
199 Ga0097620_100000008
200 Ga0097620_100075584
201 Ga0099794_10006987
202 Ga0099794_10009033
203 Ga0099794_10027995
204 Ga0105240_10044693
205 Ga0105245_10195614
206 Ga0105242_10085316
207 Ga0105248_10191082
208 Ga0105238_10201344
209 Ga0157376_10044363
210 Ga0207699_10216315
211 Ga0207684_10029617
212 Ga0207684_10179948
213 Ga0207671_10015460
214 Ga0207693_10009014
215 Ga0207652_10012213
216 Ga0207652_10023693
217 Ga0207652_10245647
218 Ga0207694_10080587
219 Ga0207670_10048500
220 Ga0207667_10001382
221 Ga0207702_10194754
222 Ga0207648_10053052
223 Ga0209588_1003071
224 Ga0207428_10057128
225 Ga0265354_1000096
226 Ga0265354_1000815
227 Ga0265337_1005972
228 Ga0265319_1000070
229 Ga0265334_10003028
230 Ga0265318_10000184
231 Ga0265770_1000450
232 Ga0265765_1000436
233 Ga0265760_10002377
234 Ga0265760_10006757
235 Ga0265330_10000830
236 Ga0265332_10000448
237 Ga0265320_10000265
238 Ga0265320_10003552
239 Ga0265320_10028367
240 Ga0265325_10001067
241 Ga0265329_10000122
242 Ga0265340_10000305
243 Ga0265340_10038813
244 Ga0265339_10002179
245 Ga0265331_10002687
246 Ga0265331_10060177
247 Ga0265316_10001660
248 Ga0265316_10004178
249 Ga0265316_10008894
250 Ga0265316_10053888
251 Ga0265313_10000078
252 Ga0265313_10005610
253 Ga0307508_10004319
254 Ga0265314_10002370
255 Ga0265314_10040651
256 Ga0265342_10000330
257 Ga0316578_10092171
258 Ga0307516_10004907
259 Ga0307406_10028753
260 Ga0307415_100024068
261 Ga0316212_1002518
262 Ga0373934_0002935
263 Ga0373953_0022356
264 Ga0373954_0000086
265 Ga0373954_0027941
266 Ga0373954_0029538
267 Ga0373956_0000871
268 Ga0373957_0002020
269 Ga0373927_0004425
270 Ga0373933_0000773
271 Ga0373947_0000218
272 Ga0373947_0202976
273 Ga0373937_0002950
274 Ga0373937_0007356
275 Ga0373937_0058101
276 Ga0373925_0000238
277 Ga0373925_0059380
278 Ga0373925_0477090
279 Ga0400489_75598
280 Ga0400487_54358
281 Ga0436365_0849090
282 Ga0451807_0193603
283 Ga0451807_1119060
284 Ga0451837_1246239
285 Ga0451577_0004976
286 Ga0466965_0117342
287 Ga0453684_0010290
288 Ga0466960_0016289
289 Ga0495592_0028998
290 Ga0495651_0298337
291 Ga0495580_0029568
292 Ga0495608_0012009
293 Ga0495587_0004144
294 Ga0495587_0011883
295 Ga0495657_0092306
296 Ga0495623_0115016
297 Ga0495613_0026870
298 Ga0495624_0027850
299 Ga0495604_0000307
300 Ga0495674_0110022
301 Ga0495680_0025508
302 Ga0495684_0025764
303 Ga0495602_0038677
304 Ga0496104_0063092
305 Ga0496114_0165489
306 Ga0501068_0072078
307 Ga0501077_0051178
308 nmdc:mga08y16_4027_c1
309 nmdc:mga08x19_47958_c1
310 Ga0500616_0022567

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

66

319

0.98

PF08669

GCV_T_C

Glycine cleavage T-protein C-terminal barrel domain

343

422

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.9757 1 344
4paa-assembly2.cif.gz_B crystal structure of the mature form of rat dmgdh complexed with tetrahydrofolate 0.9592 5 344
5l46-assembly1.cif.gz_A crystal structure of human dimethylglycine-dehydrogenase 0.9589 5 344
1yx2-assembly1.cif.gz_A crystal structure of the probable aminomethyltransferase from bacillus subtilis 0.9549 1 342
3gir-assembly1.cif.gz_A crystal structure of glycine cleavage system aminomethyltransferase t from bartonella henselae 0.948 1 344
ID Description Score Start End Superfamily
1wosA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.974 33 117 3.30.70.1400
af_A9C3Q7_322_398_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9682 262 339 2.40.30.110
af_I1KNF5_321_395_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9682 264 339 2.40.30.110
af_O14110_304_377_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9641 265 339 2.40.30.110
af_Q9VKR4_313_397_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9581 262 345 2.40.30.110
ID Description Score Start End GO Terms
AF-A0A7X4YHE0-F1-model_v4 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.987 1 346 GO:0004047
GO:0005829
GO:0005960
GO:0008168
GO:0008483
GO:0019464
GO:0032259
AF-A0A2N1U7D0-F1-model_v4 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.987 1 347 GO:0004047
GO:0005829
GO:0005960
GO:0008483
GO:0019464
AF-A0A534SMP2-F1-model_v4 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9856 1 347 GO:0004047
GO:0005829
GO:0005960
GO:0008168
GO:0008483
GO:0019464
GO:0032259
AF-A0A3N5KXQ3-F1-model_v4 aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9855 55 347 GO:0004047
GO:0005829
GO:0005960
GO:0006546
GO:0008168
GO:0008483
GO:0032259
AF-A0A1H7ZXE4-F1-model_v4 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9843 1 347 GO:0004047
GO:0005829
GO:0005960
GO:0008168
GO:0008483
GO:0019464
GO:0032259

Map