F220122

General Info

Members Datasets Scaffolds Average Seq Length
154 119 308 315

Family's Representative Sequence

Representative Sequence 3300035692|Ga0373935_0217722|Ga0373935_0217722_107_1213
Length 368
Sequence VRLRADGPGLRICAWLLLTRSSMEDPRILRNPALRKRERHCRERGTPLMSAFVRIGLMIGPERGRYHDKVARLAADAEAAEHAGFTSVWVPQIPDDFDALTAVALMGQATTRIEIGTAVMPIQTRHPIAMAQQALSTQEVCEGRFTLGLGPSHHWIVTDMLGLPYDRPARLVRNYLEVLNVAFAGPGAVDVENDDYRVHNPLDVTDTPVSVLVAALAPVMLKVAGELASGTILWMADERAIGDHILPRITKAASAAARPAPRVVAGVPVVLCANDDVDAARAWANRALGHAEYSPNYIRLLEHGDATDVGDLLAAGDESAVIERLRSFRDAGVTDLAVRVLPLGGDRDARIASRDRTRAFLSSLCPEL

Samples

Sample ID Description Type Environment
1 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
52 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
71 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
72 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
84 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
85 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
93 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
94 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
95 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
96 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
97 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
102 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
103 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
104 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
105 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
106 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
109 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
110 2671180195 Frankia sp. CcI49 Isolate Nodule
111 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
112 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
113 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
114 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
115 2773857922 Frankia sp. CcI49 Isolate Nodule
116 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
117 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
118 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
119 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.86
Metatranscriptomes 0
Isolates 7.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.29
Nodule 2.6
Rhizoplane 14.29
Rhizosphere 62.34
Stem 0
Stem Tuber 0
Unclassified 1.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373935_0217722 3300035692 Bacteria 1325
2 Ga0070676_10075440 3300005328 Bacteria 2033
3 Ga0070680_100000077 3300005336 Bacteria 53035
4 Ga0070689_100207282 3300005340 Bacteria 1603
5 Ga0070668_100032629 3300005347 Bacteria 3963
6 Ga0070671_100007363 3300005355 Bacteria 8793
7 Ga0070674_100283464 3300005356 Bacteria 1314
8 Ga0070667_100074928 3300005367 Bacteria 2888
9 Ga0070708_100066699 3300005445 Bacteria 3230
10 Ga0070678_100007050 3300005456 Bacteria 6643
11 Ga0070662_100194681 3300005457 Bacteria 1605
12 Ga0070681_10000039 3300005458 Bacteria 92866
13 Ga0070681_10219599 3300005458 Bacteria 1816
14 Ga0070706_100036152 3300005467 Bacteria 4560
15 Ga0070707_100161396 3300005468 Bacteria 2184
16 Ga0070698_100003999 3300005471 Bacteria 16228
17 Ga0070698_100009052 3300005471 Bacteria 10704
18 Ga0070679_100000146 3300005530 Bacteria 57305
19 Ga0070672_100329420 3300005543 Bacteria 1299
20 Ga0070686_100179568 3300005544 Bacteria 1503
21 Ga0070695_100104899 3300005545 Bacteria 1909
22 Ga0070665_100043303 3300005548 Bacteria 4524
23 Ga0068856_100122748 3300005614 Bacteria 2600
24 Ga0070702_100273467 3300005615 Bacteria 1156
25 Ga0068863_100005790 3300005841 Bacteria 12117
26 Ga0068862_100189656 3300005844 Bacteria 1849
27 Ga0075365_10087002 3300006038 Bacteria 2124
28 Ga0075368_10013233 3300006042 Bacteria 3027
29 Ga0075363_100012811 3300006048 Bacteria 4048
30 Ga0075363_100041760 3300006048 Bacteria 2420
31 Ga0075363_100049674 3300006048 Bacteria 2234
32 Ga0075363_100121295 3300006048 Bacteria 1460
33 Ga0075364_10000659 3300006051 Bacteria 17879
34 Ga0075364_10036994 3300006051 Bacteria 3158
35 Ga0075362_10013903 3300006177 Bacteria 3234
36 Ga0075367_10029616 3300006178 Bacteria 3133
37 Ga0075369_10002232 3300006186 Bacteria 6864
38 Ga0075369_10032857 3300006186 Bacteria 2197
39 Ga0075428_100000149 3300006844 Bacteria 63444
40 Ga0075428_100091401 3300006844 Bacteria 3320
41 Ga0075430_100340192 3300006846 Bacteria 1239
42 Ga0075429_100347661 3300006880 Bacteria 1298
43 Ga0111539_10320775 3300009094 Bacteria 1803
44 Ga0105245_10041438 3300009098 Bacteria 4105
45 Ga0114129_10009897 3300009147 Bacteria 13594
46 Ga0105248_10007314 3300009177 Bacteria 12115
47 Ga0157375_10301455 3300013308 Bacteria 1766
48 Ga0163163_10186811 3300014325 Bacteria 2120
49 Ga0213876_10002776 3300021384 Bacteria 10205
50 Ga0207647_10058112 3300025904 Bacteria 2369
51 Ga0207645_10084990 3300025907 Bacteria 2031
52 Ga0207707_10000313 3300025912 Bacteria 51103
53 Ga0207660_10000126 3300025917 Bacteria 45218
54 Ga0207652_10000277 3300025921 Bacteria 53168
55 Ga0207646_10160891 3300025922 Bacteria 2026
56 Ga0207644_10010128 3300025931 Bacteria 6210
57 Ga0207683_10034176 3300026121 Bacteria 4418
58 Ga0265338_10000221 3300028800 Bacteria 105982
59 Ga0265325_10001860 3300031241 Bacteria 14575
60 Ga0265339_10048933 3300031249 Bacteria 2316
61 Ga0265327_10002710 3300031251 Bacteria 18144
62 Ga0265327_10004299 3300031251 Bacteria 12720
63 Ga0307408_100356515 3300031548 Bacteria 1243
64 Ga0265342_10124774 3300031712 Bacteria 1447
65 Ga0316576_10247698 3300031727 Bacteria 1338
66 Ga0307413_10023038 3300031824 Bacteria 3369
67 Ga0307409_100072718 3300031995 Bacteria 2739
68 Ga0307411_10031479 3300032005 Bacteria 3265
69 Ga0316574_0092988 3300035398 Bacteria 1925
70 Ga0373925_0060013 3300037068 Bacteria 2855
71 Ga0436365_0694005 3300039437 Bacteria 12947
72 Ga0436365_1699812 3300039437 Bacteria 3868
73 Ga0466963_0034207 3300044694 Bacteria 3306
74 Ga0466970_0134249 3300044765 Unclassified 1361
75 Ga0466967_0103365 3300045976 Bacteria 2607
76 Ga0466967_0197694 3300045976 Bacteria 1903
77 Ga0466967_0345855 3300045976 Bacteria 1439
78 Ga0466967_0363621 3300045976 Bacteria 1402
79 Ga0466967_0652737 3300045976 Bacteria 1040
80 Ga0495651_0101534 3300046462 Bacteria 2141
81 Ga0495653_0187308 3300046463 Bacteria 1415
82 Ga0495630_0085546 3300046517 Bacteria 2381
83 Ga0495635_0100312 3300046663 Bacteria 1979
84 Ga0495658_0122223 3300046683 Bacteria 1576
85 Ga0495658_0198828 3300046683 Bacteria 1249
86 Ga0495674_0063909 3300047319 Bacteria 3201
87 Ga0495674_0177459 3300047319 Bacteria 1775
88 Ga0496100_0154320 3300048903 Bacteria 1641
89 Ga0496101_0002434 3300048904 Bacteria 11438
90 Ga0496102_0014779 3300048905 Bacteria 6789
91 Ga0496104_0077946 3300048907 Bacteria 3158
92 Ga0496104_0083149 3300048907 Bacteria 3053
93 Ga0496104_0311071 3300048907 Bacteria 1488
94 Ga0496106_0000758 3300048909 Bacteria 23299
95 Ga0496108_0080717 3300048911 Bacteria 2756
96 Ga0496108_0103468 3300048911 Bacteria 2430
97 Ga0496108_0157475 3300048911 Bacteria 1962
98 Ga0496109_0100777 3300048912 Bacteria 2680
99 Ga0496109_0189048 3300048912 Bacteria 1935
100 Ga0496110_0007540 3300048913 Bacteria 8691
101 Ga0496110_0010924 3300048913 Bacteria 7406
102 Ga0496110_0170451 3300048913 Bacteria 1975
103 Ga0496111_0256378 3300048914 Bacteria 1298
104 Ga0496112_0019617 3300048915 Bacteria 6385
105 Ga0496112_0025155 3300048915 Bacteria 5713
106 Ga0496114_0177929 3300048917 Bacteria 1857
107 Ga0496114_0299704 3300048917 Bacteria 1419
108 Ga0496115_0010710 3300048918 Bacteria 6859
109 Ga0496115_0350166 3300048918 Bacteria 1205
110 Ga0496118_0174299 3300048921 Bacteria 1309
111 Ga0496126_0000027 3300048929 Bacteria 396518
112 Ga0501037_0062072 3300049573 Bacteria 2725
113 Ga0501047_0570330 3300049581 Bacteria 955
114 Ga0501069_0012290 3300049585 Bacteria 4551
115 Ga0501070_0021471 3300049586 Bacteria 5416
116 Ga0501070_0113131 3300049586 Bacteria 2243
117 Ga0501073_0011051 3300049589 Bacteria 6604
118 Ga0501074_0012651 3300049590 Bacteria 6137
119 Ga0501079_0040035 3300049741 Bacteria 3615
120 Ga0501080_0001256 3300049742 Bacteria 21114
121 Ga0501080_0005231 3300049742 Bacteria 11557
122 Ga0501080_0026878 3300049742 Bacteria 5351
123 Ga0501080_0174181 3300049742 Bacteria 1983
124 Ga0501081_0325258 3300049743 Bacteria 1131
125 nmdc:mga03683_105059_c1 3300050489 Bacteria 1244
126 nmdc:mga03n38_21819_c1 3300050490 Bacteria 2582
127 nmdc:mga03n38_9888_c1 3300050490 Bacteria 3487
128 nmdc:mga00v17_15869_c1 3300050491 Bacteria 4238
129 nmdc:mga0yw44_180264_c1 3300050492 Bacteria 1390
130 nmdc:mga0yw44_4686_c1 3300050492 Bacteria 6319
131 nmdc:mga0yw44_69882_c1 3300050492 Bacteria 2176
132 nmdc:mga05p37_549006_c1 3300050507 Bacteria 1316
133 nmdc:mga05p37_7891_c1 3300050507 Bacteria 12563
134 nmdc:mga08y16_258799_c1 3300050511 Bacteria 1797
135 nmdc:mga0n895_172956_c1 3300050512 Bacteria 2191
136 Ga0495601_0240129 3300053077 Bacteria 1183
137 Ga0495619_0048620 3300053085 Bacteria 2795
138 Ga0500652_019967 3300053131 Bacteria 2498
139 Ga0500588_0053689 3300053146 Bacteria 1267
140 Ga0500616_0039179 3300053153 Unclassified 2556
141 Ga0501084_0000240 3300054114 Bacteria 41460
142 Ga0501084_0174497 3300054114 Bacteria 1814
143 Ga0530510_0011823 3300061734 Bacteria 6125
144 2523382995 2523231044 Bacteria 6434991
145 2671833174 2671180195 Bacteria 9757215
146 2686540488 2684623035 Bacteria 8032739
147 2689994411 2687453743 Bacteria 8361025
148 2738703008 2738541274 Bacteria 6909446
149 2739333813 2738543028 Bacteria 6917070
150 2774851330 2773857922 Bacteria 9757215
151 2809193515 2808606439 Bacteria 5952208
152 2842140257 2842134933 Bacteria 5847019
153 2895881971 2895880812 Bacteria 11255272
154 2902803614 2902799365 Bacteria 5419524
155 Ga0373935_0217722
156 Ga0070676_10075440
157 Ga0070680_100000077
158 Ga0070689_100207282
159 Ga0070668_100032629
160 Ga0070671_100007363
161 Ga0070674_100283464
162 Ga0070667_100074928
163 Ga0070708_100066699
164 Ga0070678_100007050
165 Ga0070662_100194681
166 Ga0070681_10000039
167 Ga0070681_10219599
168 Ga0070706_100036152
169 Ga0070707_100161396
170 Ga0070698_100003999
171 Ga0070698_100009052
172 Ga0070679_100000146
173 Ga0070672_100329420
174 Ga0070686_100179568
175 Ga0070695_100104899
176 Ga0070665_100043303
177 Ga0068856_100122748
178 Ga0070702_100273467
179 Ga0068863_100005790
180 Ga0068862_100189656
181 Ga0075365_10087002
182 Ga0075368_10013233
183 Ga0075363_100012811
184 Ga0075363_100041760
185 Ga0075363_100049674
186 Ga0075363_100121295
187 Ga0075364_10000659
188 Ga0075364_10036994
189 Ga0075362_10013903
190 Ga0075367_10029616
191 Ga0075369_10002232
192 Ga0075369_10032857
193 Ga0075428_100000149
194 Ga0075428_100091401
195 Ga0075430_100340192
196 Ga0075429_100347661
197 Ga0111539_10320775
198 Ga0105245_10041438
199 Ga0114129_10009897
200 Ga0105248_10007314
201 Ga0157375_10301455
202 Ga0163163_10186811
203 Ga0213876_10002776
204 Ga0207647_10058112
205 Ga0207645_10084990
206 Ga0207707_10000313
207 Ga0207660_10000126
208 Ga0207652_10000277
209 Ga0207646_10160891
210 Ga0207644_10010128
211 Ga0207683_10034176
212 Ga0265338_10000221
213 Ga0265325_10001860
214 Ga0265339_10048933
215 Ga0265327_10002710
216 Ga0265327_10004299
217 Ga0307408_100356515
218 Ga0265342_10124774
219 Ga0316576_10247698
220 Ga0307413_10023038
221 Ga0307409_100072718
222 Ga0307411_10031479
223 Ga0316574_0092988
224 Ga0373925_0060013
225 Ga0436365_0694005
226 Ga0436365_1699812
227 Ga0466963_0034207
228 Ga0466970_0134249
229 Ga0466967_0103365
230 Ga0466967_0197694
231 Ga0466967_0345855
232 Ga0466967_0363621
233 Ga0466967_0652737
234 Ga0495651_0101534
235 Ga0495653_0187308
236 Ga0495630_0085546
237 Ga0495635_0100312
238 Ga0495658_0122223
239 Ga0495658_0198828
240 Ga0495674_0063909
241 Ga0495674_0177459
242 Ga0496100_0154320
243 Ga0496101_0002434
244 Ga0496102_0014779
245 Ga0496104_0077946
246 Ga0496104_0083149
247 Ga0496104_0311071
248 Ga0496106_0000758
249 Ga0496108_0080717
250 Ga0496108_0103468
251 Ga0496108_0157475
252 Ga0496109_0100777
253 Ga0496109_0189048
254 Ga0496110_0007540
255 Ga0496110_0010924
256 Ga0496110_0170451
257 Ga0496111_0256378
258 Ga0496112_0019617
259 Ga0496112_0025155
260 Ga0496114_0177929
261 Ga0496114_0299704
262 Ga0496115_0010710
263 Ga0496115_0350166
264 Ga0496118_0174299
265 Ga0496126_0000027
266 Ga0501037_0062072
267 Ga0501047_0570330
268 Ga0501069_0012290
269 Ga0501070_0021471
270 Ga0501070_0113131
271 Ga0501073_0011051
272 Ga0501074_0012651
273 Ga0501079_0040035
274 Ga0501080_0001256
275 Ga0501080_0005231
276 Ga0501080_0026878
277 Ga0501080_0174181
278 Ga0501081_0325258
279 nmdc:mga03683_105059_c1
280 nmdc:mga03n38_21819_c1
281 nmdc:mga03n38_9888_c1
282 nmdc:mga00v17_15869_c1
283 nmdc:mga0yw44_180264_c1
284 nmdc:mga0yw44_4686_c1
285 nmdc:mga0yw44_69882_c1
286 nmdc:mga05p37_549006_c1
287 nmdc:mga05p37_7891_c1
288 nmdc:mga08y16_258799_c1
289 nmdc:mga0n895_172956_c1
290 Ga0495601_0240129
291 Ga0495619_0048620
292 Ga0500652_019967
293 Ga0500588_0053689
294 Ga0500616_0039179
295 Ga0501084_0000240
296 Ga0501084_0174497
297 Ga0530510_0011823
298 2523382995
299 2671833174
300 2686540488
301 2689994411
302 2738703008
303 2739333813
304 2774851330
305 2809193515
306 2842140257
307 2895881971
308 2902803614

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

49

335

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1luc-assembly1.cif.gz_A bacterial luciferase 0.8048 1 318
1luc-assembly1.cif.gz_A bacterial luciferase 0.8024 1 318
3fgc-assembly2.cif.gz_C crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication 0.8006 1 304
7bip-assembly1.cif.gz_B crystal structure of monooxygenase rslo1 from streptomyces bottropensis 0.7995 1 313
6ket-assembly1.cif.gz_A flavin-utilizing monooxygenase (ox) domain of hybrid polyketide/non-ribosomal peptide synthetase 0.7896 1 314
ID Description Score Start End Superfamily
af_P9WIB7_23_373_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8054 24 309 3.20.20.30
3fgcC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8006 1 304 3.20.20.30
af_P95159_1_299_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7895 1 304 3.20.20.30
af_O05772_7_317_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7834 12 304 3.20.20.30
1rhcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7815 2 318 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A2S9FBB6-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9809 1 283 GO:0016705
AF-A0A2S9FBB6-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9775 1 283 GO:0016705
AF-A0A7G1I382-F1-model_v4 Luciferase-like domain-containing protein 0.9637 157 317 GO:0016705
AF-A0A7I7LKU1-F1-model_v4 Luciferase-like domain-containing protein 0.9607 110 317 GO:0016705
AF-A0A0F9HFV9-F1-model_v4 Luciferase-like domain-containing protein 0.9514 62 318 GO:0016705

Map