F218270

General Info

Members Datasets Scaffolds Average Seq Length
153 116 307 301

Family's Representative Sequence

Representative Sequence 3300053159|Ga0500630_021562|Ga0500630_021562_308_1291
Length 327
Sequence MLHSRGISISGSEISHQGDNMRVFVTGASGHIGSAVVAELLAAKHRVVGLARSEASADKIAAAGADVLRGDLDDVAGVVAAARAADGVIHLGYKHDLAFGGTPDGFVKAADHDVRVVKMIGEALAGSNKPFVSTAGTAQLALFGGITRVGTEDDVVAGGPRVDGENAVIALGQHGVRSSVIRLPPTVHSSLDHHGFVPMFVAAARKNGFSAYLGDGANVWPAVHTLDAARLYRLALESAPAGTRLHGVADEGVAFRAIAEAIAKGLGVPAKPISAAEAPQYIGAMAHFAQVNNPTSSARTRALLRWEPTHPGLLADLAERHYFVAAR

Samples

Sample ID Description Type Environment
1 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
78 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
81 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
89 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
110 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
116 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.88
Nodule 0
Rhizoplane 2.61
Rhizosphere 81.7
Stem 0
Stem Tuber 0
Unclassified 3.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500630_021562 3300053159 Bacteria 3184
2 JGI24737J22298_10006326 3300001990 Bacteria 4049
3 rootH2_10093632 3300003320 Bacteria 2183
4 rootH1_10001077 3300003323 Bacteria 4253
5 rootH1_10127539 3300003323 Bacteria 2474
6 rootH1_10134768 3300003323 Bacteria 5030
7 rootH1_10149265 3300003316 Bacteria 3867
8 rootH1_10149265 3300003323 Bacteria 3409
9 rootH1_10205206 3300003323 Bacteria 3711
10 Ga0070658_10196013 3300005327 Bacteria 1703
11 Ga0070666_10034363 3300005335 Bacteria 3360
12 Ga0068868_100088578 3300005338 Bacteria 2491
13 Ga0070687_100218223 3300005343 Bacteria 1166
14 Ga0070668_100326928 3300005347 Bacteria 1292
15 Ga0070674_100044234 3300005356 Bacteria 3035
16 Ga0070688_100064981 3300005365 Bacteria 2317
17 Ga0070714_100289610 3300005435 Bacteria 1524
18 Ga0070713_100061078 3300005436 Bacteria 3153
19 Ga0070705_100048495 3300005440 Bacteria 2461
20 Ga0070708_100056160 3300005445 Bacteria 3501
21 Ga0068867_100057638 3300005459 Bacteria 2877
22 Ga0068867_100100935 3300005459 Bacteria 2204
23 Ga0070706_100362171 3300005467 Bacteria 1351
24 Ga0070707_100115384 3300005468 Bacteria 2606
25 Ga0070698_100245637 3300005471 Bacteria 1723
26 Ga0070697_100070763 3300005536 Bacteria 2860
27 Ga0070697_100107763 3300005536 Bacteria 2318
28 Ga0070686_100068305 3300005544 Bacteria 2318
29 Ga0070695_100097628 3300005545 Bacteria 1973
30 Ga0070696_100366854 3300005546 Bacteria 1119
31 Ga0070665_100007487 3300005548 Bacteria 11102
32 Ga0070665_100154255 3300005548 Bacteria 2298
33 Ga0070665_100235617 3300005548 Bacteria 1831
34 Ga0070704_100083726 3300005549 Bacteria 2356
35 Ga0068857_100422260 3300005577 Bacteria 1243
36 Ga0068854_100417142 3300005578 Bacteria 1114
37 Ga0068856_100327654 3300005614 Bacteria 1549
38 Ga0068864_100082887 3300005618 Bacteria 2815
39 Ga0068858_100003352 3300005842 Bacteria 15945
40 Ga0068858_100154466 3300005842 Bacteria 2159
41 Ga0068860_100197067 3300005843 Bacteria 1951
42 Ga0070717_10094400 3300006028 Bacteria 2530
43 Ga0075364_10218932 3300006051 Bacteria 1292
44 Ga0075432_10098549 3300006058 Unclassified 1078
45 Ga0075367_10028181 3300006178 Bacteria 3202
46 Ga0075366_10095116 3300006195 Bacteria 1786
47 Ga0068871_100000739 3300006358 Bacteria 22191
48 Ga0068865_100017394 3300006881 Bacteria 4624
49 Ga0068865_100217460 3300006881 Bacteria 1492
50 Ga0075435_100157967 3300007076 Bacteria 1909
51 Ga0105245_10001203 3300009098 Bacteria 23428
52 Ga0105245_10002864 3300009098 Bacteria 15498
53 Ga0105245_10017670 3300009098 Bacteria 6225
54 Ga0105242_10005891 3300009176 Bacteria 9450
55 Ga0105242_10031299 3300009176 Bacteria 4248
56 Ga0105242_10148266 3300009176 Bacteria 2043
57 Ga0105248_10032391 3300009177 Bacteria 5841
58 Ga0105248_10139302 3300009177 Bacteria 2737
59 Ga0105248_10412270 3300009177 Bacteria 1521
60 Ga0105237_10000213 3300009545 Bacteria 82121
61 Ga0105239_10384383 3300010375 Bacteria 1587
62 Ga0163162_10163001 3300013306 Bacteria 2352
63 Ga0163162_10220374 3300013306 Bacteria 2027
64 Ga0157372_10012078 3300013307 Bacteria 9200
65 Ga0157375_10347188 3300013308 Bacteria 1650
66 Ga0163163_10040462 3300014325 Bacteria 4551
67 Ga0157380_10138023 3300014326 Bacteria 2090
68 Ga0157379_10006199 3300014968 Bacteria 10300
69 Ga0157379_10079534 3300014968 Bacteria 2935
70 Ga0157376_10008577 3300014969 Bacteria 7384
71 Ga0157376_10031178 3300014969 Bacteria 4266
72 Ga0157376_10120575 3300014969 Bacteria 2324
73 Ga0207680_10017768 3300025903 Bacteria 3764
74 Ga0207647_10014133 3300025904 Bacteria 5513
75 Ga0207705_10179865 3300025909 Bacteria 1596
76 Ga0207684_10300226 3300025910 Bacteria 1384
77 Ga0207654_10010002 3300025911 Bacteria 4821
78 Ga0207654_10055028 3300025911 Unclassified 2302
79 Ga0207671_10000266 3300025914 Bacteria 78418
80 Ga0207646_10172793 3300025922 Bacteria 1951
81 Ga0207687_10002644 3300025927 Bacteria 12132
82 Ga0207687_10010250 3300025927 Bacteria 6122
83 Ga0207700_10096175 3300025928 Bacteria 2351
84 Ga0207664_10269466 3300025929 Bacteria 1491
85 Ga0207686_10002966 3300025934 Bacteria 9147
86 Ga0207686_10011008 3300025934 Bacteria 4938
87 Ga0207669_10072971 3300025937 Bacteria 2163
88 Ga0207704_10043211 3300025938 Bacteria 2659
89 Ga0207704_10115711 3300025938 Bacteria 1823
90 Ga0207711_10008496 3300025941 Bacteria 8591
91 Ga0207689_10296571 3300025942 Bacteria 1340
92 Ga0207668_10218685 3300025972 Bacteria 1528
93 Ga0207703_10115785 3300026035 Bacteria 2294
94 Ga0207641_10115568 3300026088 Bacteria 2386
95 Ga0207648_10026890 3300026089 Bacteria 5110
96 Ga0207648_10147225 3300026089 Bacteria 2077
97 Ga0207676_10172995 3300026095 Bacteria 1883
98 Ga0207674_10069335 3300026116 Bacteria 3547
99 Ga0268266_10006007 3300028379 Bacteria 11205
100 Ga0268264_10169042 3300028381 Bacteria 1976
101 Ga0265326_10001664 3300028558 Bacteria 7696
102 Ga0265334_10015479 3300028573 Bacteria 3167
103 Ga0265318_10010717 3300028577 Bacteria 3981
104 Ga0307517_10038551 3300028786 Bacteria 5283
105 Ga0265338_10001577 3300028800 Bacteria 36745
106 Ga0265338_10004006 3300028800 Bacteria 20237
107 Ga0265338_10043692 3300028800 Bacteria 4151
108 Ga0265338_10044378 3300028800 Bacteria 4107
109 Ga0265338_10095937 3300028800 Bacteria 2435
110 Ga0307511_10016157 3300030521 Bacteria 7206
111 Ga0265328_10025733 3300031239 Bacteria 2216
112 Ga0265325_10011008 3300031241 Bacteria 5208
113 Ga0265340_10003083 3300031247 Bacteria 9459
114 Ga0265340_10008557 3300031247 Bacteria 5519
115 Ga0265339_10007728 3300031249 Bacteria 6911
116 Ga0265331_10091758 3300031250 Unclassified 1403
117 Ga0265327_10000018 3300031251 Bacteria 439197
118 Ga0265316_10027535 3300031344 Bacteria 4704
119 Ga0307509_10000771 3300031507 Bacteria 54763
120 Ga0307509_10001261 3300031507 Bacteria 42927
121 Ga0307509_10093767 3300031507 Bacteria 3063
122 Ga0265313_10001873 3300031595 Bacteria 19119
123 Ga0265313_10093519 3300031595 Unclassified 1345
124 Ga0307508_10027832 3300031616 Bacteria 5115
125 Ga0265342_10006735 3300031712 Bacteria 8512
126 Ga0395905_0234232 3300037471 Bacteria 1717
127 Ga0436364_0357785 3300037853 Bacteria 6855
128 Ga0395901_0251230 3300038443 Bacteria 1842
129 Ga0436363_1445775 3300039450 Bacteria 5033
130 Ga0466963_0048808 3300044694 Bacteria 2798
131 Ga0466963_0089505 3300044694 Bacteria 2094
132 Ga0466964_0018919 3300044706 Bacteria 2645
133 Ga0466967_0012164 3300045976 Bacteria 6566
134 Ga0466967_0024493 3300045976 Bacteria 4963
135 Ga0495650_0020235 3300046471 Bacteria 3250
136 Ga0495585_0104036 3300046492 Bacteria 1515
137 Ga0496104_0104517 3300048907 Bacteria 2714
138 Ga0496105_0338598 3300048908 Bacteria 1203
139 Ga0496109_0576365 3300048912 Bacteria 1061
140 Ga0496115_0062153 3300048918 Bacteria 3012
141 Ga0496126_0405077 3300048929 Bacteria 1105
142 Ga0501046_0246800 3300049580 Bacteria 1315
143 Ga0501070_0000741 3300049586 Bacteria 29816
144 Ga0501083_0105874 3300049744 Bacteria 1852
145 nmdc:mga00v17_196235_c1 3300050491 Bacteria 1304
146 nmdc:mga06z11_33190_c1 3300050494 Bacteria 2523
147 nmdc:mga0n895_189494_c1 3300050512 Bacteria 2088
148 nmdc:mga0n895_266022_c1 3300050512 Unclassified 1740
149 nmdc:mga0rr50_155195_c1 3300050513 Bacteria 1854
150 nmdc:mga08x19_152096_c1 3300050514 Bacteria 1568
151 nmdc:mga0a205_191978_c1 3300050515 Bacteria 1934
152 Ga0500578_0016960 3300053086 Bacteria 4679
153 Ga0500566_0004170 3300053094 Bacteria 8619
154 Ga0500566_0059386 3300053094 Bacteria 2168
155 Ga0500630_021562
156 JGI24737J22298_10006326
157 rootH2_10093632
158 rootH1_10001077
159 rootH1_10127539
160 rootH1_10134768
161 rootH1_10149265
162 rootH1_10205206
163 Ga0070658_10196013
164 Ga0070666_10034363
165 Ga0068868_100088578
166 Ga0070687_100218223
167 Ga0070668_100326928
168 Ga0070674_100044234
169 Ga0070688_100064981
170 Ga0070714_100289610
171 Ga0070713_100061078
172 Ga0070705_100048495
173 Ga0070708_100056160
174 Ga0068867_100057638
175 Ga0068867_100100935
176 Ga0070706_100362171
177 Ga0070707_100115384
178 Ga0070698_100245637
179 Ga0070697_100070763
180 Ga0070697_100107763
181 Ga0070686_100068305
182 Ga0070695_100097628
183 Ga0070696_100366854
184 Ga0070665_100007487
185 Ga0070665_100154255
186 Ga0070665_100235617
187 Ga0070704_100083726
188 Ga0068857_100422260
189 Ga0068854_100417142
190 Ga0068856_100327654
191 Ga0068864_100082887
192 Ga0068858_100003352
193 Ga0068858_100154466
194 Ga0068860_100197067
195 Ga0070717_10094400
196 Ga0075364_10218932
197 Ga0075432_10098549
198 Ga0075367_10028181
199 Ga0075366_10095116
200 Ga0068871_100000739
201 Ga0068865_100017394
202 Ga0068865_100217460
203 Ga0075435_100157967
204 Ga0105245_10001203
205 Ga0105245_10002864
206 Ga0105245_10017670
207 Ga0105242_10005891
208 Ga0105242_10031299
209 Ga0105242_10148266
210 Ga0105248_10032391
211 Ga0105248_10139302
212 Ga0105248_10412270
213 Ga0105237_10000213
214 Ga0105239_10384383
215 Ga0163162_10163001
216 Ga0163162_10220374
217 Ga0157372_10012078
218 Ga0157375_10347188
219 Ga0163163_10040462
220 Ga0157380_10138023
221 Ga0157379_10006199
222 Ga0157379_10079534
223 Ga0157376_10008577
224 Ga0157376_10031178
225 Ga0157376_10120575
226 Ga0207680_10017768
227 Ga0207647_10014133
228 Ga0207705_10179865
229 Ga0207684_10300226
230 Ga0207654_10010002
231 Ga0207654_10055028
232 Ga0207671_10000266
233 Ga0207646_10172793
234 Ga0207687_10002644
235 Ga0207687_10010250
236 Ga0207700_10096175
237 Ga0207664_10269466
238 Ga0207686_10002966
239 Ga0207686_10011008
240 Ga0207669_10072971
241 Ga0207704_10043211
242 Ga0207704_10115711
243 Ga0207711_10008496
244 Ga0207689_10296571
245 Ga0207668_10218685
246 Ga0207703_10115785
247 Ga0207641_10115568
248 Ga0207648_10026890
249 Ga0207648_10147225
250 Ga0207676_10172995
251 Ga0207674_10069335
252 Ga0268266_10006007
253 Ga0268264_10169042
254 Ga0265326_10001664
255 Ga0265334_10015479
256 Ga0265318_10010717
257 Ga0307517_10038551
258 Ga0265338_10001577
259 Ga0265338_10004006
260 Ga0265338_10043692
261 Ga0265338_10044378
262 Ga0265338_10095937
263 Ga0307511_10016157
264 Ga0265328_10025733
265 Ga0265325_10011008
266 Ga0265340_10003083
267 Ga0265340_10008557
268 Ga0265339_10007728
269 Ga0265331_10091758
270 Ga0265327_10000018
271 Ga0265316_10027535
272 Ga0307509_10000771
273 Ga0307509_10001261
274 Ga0307509_10093767
275 Ga0265313_10001873
276 Ga0265313_10093519
277 Ga0307508_10027832
278 Ga0265342_10006735
279 Ga0395905_0234232
280 Ga0436364_0357785
281 Ga0395901_0251230
282 Ga0436363_1445775
283 Ga0466963_0048808
284 Ga0466963_0089505
285 Ga0466964_0018919
286 Ga0466967_0012164
287 Ga0466967_0024493
288 Ga0495650_0020235
289 Ga0495585_0104036
290 Ga0496104_0104517
291 Ga0496105_0338598
292 Ga0496109_0576365
293 Ga0496115_0062153
294 Ga0496126_0405077
295 Ga0501046_0246800
296 Ga0501070_0000741
297 Ga0501083_0105874
298 nmdc:mga00v17_196235_c1
299 nmdc:mga06z11_33190_c1
300 nmdc:mga0n895_189494_c1
301 nmdc:mga0n895_266022_c1
302 nmdc:mga0rr50_155195_c1
303 nmdc:mga08x19_152096_c1
304 nmdc:mga0a205_191978_c1
305 Ga0500578_0016960
306 Ga0500566_0004170
307 Ga0500566_0059386

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05368

NmrA

NmrA-like family

23

99

0.94

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

24

110

0.92

PF13460

NAD_binding_10

NAD(P)H-binding

27

180

0.82

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

23

145

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ic5-assembly2.cif.gz_B n-terminal domain of putative saccharopine dehydrogenase from ruegeria pomeroyi. 0.861 2 72
3orr-assembly1.cif.gz_B crystal structure of n5-carboxyaminoimidazole synthetase from staphylococcus aureus 0.8252 2 80
1g1a-assembly1.cif.gz_A the crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb)from salmonella enterica serovar typhimurium 0.7862 1 283
1r66-assembly1.cif.gz_A-2 crystal structure of desiv (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with nad and tyd bound 0.7811 1 283
1r6d-assembly1.cif.gz_A-2 crystal structure of desiv double mutant (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with nad and dau bound 0.7805 1 288
ID Description Score Start End Superfamily
af_Q9Y7K4_1_260_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9271 1 250 3.40.50.720
af_A0A1D6GEP1_267_439_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8936 2 72 3.40.50.720
af_Q12177_1_262_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.893 1 248 3.40.50.720
af_Q9Y7K4_1_260_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8894 1 250 3.40.50.720
af_A0A1D6GVM8_196_300_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.877 1 72 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A3D9S6V2-F1-model_v4 3-beta hydroxysteroid dehydrogenase 0.9886 160 286 GO:0004029
GO:0005737
AF-A0A7V3MJ56-F1-model_v4 3-beta hydroxysteroid dehydrogenase 0.9853 150 285 GO:0004029
GO:0005737
AF-A0A1J5R0C6-F1-model_v4 NAD-dependent epimerase/dehydratase 0.9792 162 284 GO:0004029
GO:0005737
AF-A0A2W5F2B0-F1-model_v4 3-beta hydroxysteroid dehydrogenase 0.972 156 279 GO:0004029
GO:0005737
AF-A0A6B2DW65-F1-model_v4 3-beta hydroxysteroid dehydrogenase 0.9702 173 280

Map