F217988

General Info

Members Datasets Scaffolds Average Seq Length
153 121 306 411

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0041529|Ga0496104_0041529_1864_3144
Length 426
Sequence LDSEDKPRRNVYDLVMTRENTVAVVGAGVIGAAVAYALAREGRTVLLLDRAEPGMAGASFGNAGHIASELVEPLPSWGLLFGFWRELFAFGGPLDIPLRRAPQFLPWALRFAAAAGHRTENTRRLAPLVKPAVDYMARWLAEVGRPEVLRTNGHLQVWFGPRSDERTAEEGLAMERLGIPTQAAPHEILQVIARQSARNPRVAGLWFPGTAHVLDPLKIVQSFAGAALQRGASFERTEVRAIQPLEGRVTLHTSSETLTVDAAVVCTGAWTASLLEPLGLRVPMESARGYHVEMPSHPPLADTPILYADRRIYVTPMDGRLRATSFMEFAGRDAAPYPRKLARLRQRLGELGYQCSADGPGWMGPRPVLPDYLPGIGRVERTSIFYAVGHQHIGLTLAPVTGELIADLVADRQPRHDISAFDLRRF

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
44 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
65 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
66 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
67 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
81 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
86 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
87 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
88 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
91 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
92 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
103 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
108 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
109 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
114 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
117 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
118 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
119 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
120 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.61
Nodule 0
Rhizoplane 5.23
Rhizosphere 84.31
Stem 0
Stem Tuber 0
Unclassified 8.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0041529 3300048907 Bacteria 4313
2 rootH2_10089984 3300003320 Bacteria 2291
3 rootH2_10092693 3300003320 Bacteria 3700
4 rootH1_10089619 3300003323 Unclassified 1896
5 Ga0070690_100071745 3300005330 Bacteria 2250
6 Ga0068869_100095391 3300005334 Unclassified 2245
7 Ga0070682_100045962 3300005337 Bacteria 2708
8 Ga0070682_100048938 3300005337 Bacteria 2634
9 Ga0070668_100035302 3300005347 Bacteria 3812
10 Ga0070675_100022575 3300005354 Bacteria 5029
11 Ga0070675_100053045 3300005354 Bacteria 3334
12 Ga0070675_100274909 3300005354 Bacteria 1479
13 Ga0070674_100014744 3300005356 Bacteria 4865
14 Ga0070674_100028447 3300005356 Bacteria 3671
15 Ga0070673_100018196 3300005364 Bacteria 5015
16 Ga0070673_100087166 3300005364 Unclassified 2544
17 Ga0070667_100270952 3300005367 Bacteria 1522
18 Ga0070700_100003631 3300005441 Bacteria 7983
19 Ga0070700_100138349 3300005441 Bacteria 1652
20 Ga0070678_100024184 3300005456 Bacteria 4062
21 Ga0070678_100034151 3300005456 Bacteria 3539
22 Ga0070685_10035939 3300005466 Bacteria 2799
23 Ga0070698_100110579 3300005471 Bacteria 2713
24 Ga0070672_100013969 3300005543 Bacteria 5681
25 Ga0070672_100025276 3300005543 Bacteria 4402
26 Ga0068856_100004638 3300005614 Bacteria 13648
27 Ga0068859_100069170 3300005617 Bacteria 3565
28 Ga0068864_100035230 3300005618 Bacteria 4260
29 Ga0068866_10049787 3300005718 Bacteria 2125
30 Ga0068861_100004463 3300005719 Bacteria 9394
31 Ga0068870_10010523 3300005840 Bacteria 4255
32 Ga0068863_100002813 3300005841 Bacteria 17226
33 Ga0068863_100044146 3300005841 Bacteria 4231
34 Ga0068858_100090859 3300005842 Bacteria 2842
35 Ga0068860_100004339 3300005843 Bacteria 14497
36 Ga0068860_100008800 3300005843 Bacteria 10057
37 Ga0068862_100000167 3300005844 Bacteria 72865
38 Ga0068862_100026263 3300005844 Bacteria 4895
39 Ga0097621_100017147 3300006237 Bacteria 5495
40 Ga0097621_100294666 3300006237 Bacteria 1431
41 Ga0068871_100062125 3300006358 Bacteria 3052
42 Ga0068865_100237356 3300006881 Unclassified 1433
43 Ga0097620_100069171 3300006931 Bacteria 3565
44 Ga0105240_10002572 3300009093 Bacteria 29080
45 Ga0111539_10037374 3300009094 Bacteria 5864
46 Ga0105245_10213512 3300009098 Bacteria 1858
47 Ga0105248_10009388 3300009177 Bacteria 10770
48 Ga0105238_10024768 3300009551 Bacteria 6116
49 Ga0157378_10000016 3300013297 Bacteria 142649
50 Ga0157378_10042792 3300013297 Bacteria 4020
51 Ga0163162_10226154 3300013306 Bacteria 2001
52 Ga0157375_10054304 3300013308 Bacteria 3945
53 Ga0157375_10074763 3300013308 Bacteria 3410
54 Ga0163163_10312464 3300014325 Bacteria 1625
55 Ga0163163_10384045 3300014325 Bacteria 1462
56 Ga0157380_10037011 3300014326 Bacteria 3780
57 Ga0157380_10051061 3300014326 Bacteria 3268
58 Ga0157380_10117853 3300014326 Bacteria 2243
59 Ga0157379_10003245 3300014968 Bacteria 13798
60 Ga0157376_10092927 3300014969 Bacteria 2617
61 Ga0183365_10001 3300015684 Bacteria 2090444
62 Ga0207682_10002447 3300025893 Bacteria 8321
63 Ga0207662_10032386 3300025918 Bacteria 3043
64 Ga0207662_10073726 3300025918 Bacteria 2071
65 Ga0207681_10224627 3300025923 Unclassified 1454
66 Ga0207694_10015179 3300025924 Bacteria 5810
67 Ga0207706_10095552 3300025933 Bacteria 2614
68 Ga0207669_10103774 3300025937 Bacteria 1886
69 Ga0207669_10111569 3300025937 Bacteria 1834
70 Ga0207691_10023879 3300025940 Bacteria 5754
71 Ga0207691_10051998 3300025940 Bacteria 3743
72 Ga0207689_10043542 3300025942 Bacteria 3711
73 Ga0207689_10089310 3300025942 Unclassified 2531
74 Ga0207651_10065748 3300025960 Bacteria 2545
75 Ga0207651_10147801 3300025960 Bacteria 1825
76 Ga0207668_10017300 3300025972 Bacteria 4514
77 Ga0207703_10128182 3300026035 Bacteria 2188
78 Ga0207678_10072972 3300026067 Bacteria 2941
79 Ga0207708_10175976 3300026075 Bacteria 1697
80 Ga0207648_10028242 3300026089 Bacteria 4975
81 Ga0207676_10017504 3300026095 Bacteria 5195
82 Ga0207675_100012461 3300026118 Bacteria 7945
83 Ga0207675_100012676 3300026118 Bacteria 7877
84 Ga0207683_10012381 3300026121 Bacteria 7280
85 Ga0207698_10136248 3300026142 Bacteria 2107
86 Ga0268265_10000178 3300028380 Bacteria 76275
87 Ga0268265_10009393 3300028380 Bacteria 6608
88 Ga0268265_10077642 3300028380 Bacteria 2609
89 Ga0268264_10044346 3300028381 Bacteria 3689
90 Ga0307512_10098940 3300030522 Unclassified 1988
91 Ga0307513_10011176 3300031456 Bacteria 11179
92 Ga0307513_10013578 3300031456 Bacteria 9990
93 Ga0307513_10104648 3300031456 Bacteria 2843
94 Ga0307509_10012968 3300031507 Bacteria 9904
95 Ga0307508_10102450 3300031616 Bacteria 2459
96 Ga0307516_10065922 3300031730 Bacteria 3495
97 Ga0307416_100070361 3300032002 Bacteria 2901
98 Ga0307510_10019226 3300033180 Bacteria 8015
99 Ga0373943_0011720 3300035170 Bacteria 3947
100 Ga0373946_0016459 3300035171 Bacteria 2818
101 Ga0373935_0005606 3300035692 Bacteria 7405
102 Ga0373927_0010529 3300035695 Bacteria 6165
103 Ga0373927_0051107 3300035695 Bacteria 2673
104 Ga0373933_0139754 3300035724 Bacteria 1529
105 Ga0373947_0076320 3300035725 Bacteria 2065
106 Ga0373937_0068703 3300036401 Bacteria 3267
107 Ga0373925_0037916 3300037068 Bacteria 3560
108 Ga0395905_0000230 3300037471 Bacteria 84716
109 Ga0495603_0000093 3300046455 Bacteria 40890
110 Ga0495590_0020606 3300046457 Bacteria 2342
111 Ga0495629_0003143 3300046459 Bacteria 12506
112 Ga0495580_0005947 3300046472 Bacteria 10006
113 Ga0495582_0001324 3300046473 Bacteria 13885
114 Ga0495639_0009700 3300046475 Bacteria 4131
115 Ga0495594_0000985 3300046499 Bacteria 14800
116 Ga0495665_0014730 3300046531 Bacteria 4214
117 Ga0495622_0049423 3300046557 Unclassified 1952
118 Ga0495625_0026764 3300046660 Bacteria 4351
119 Ga0495588_0015183 3300046674 Bacteria 3700
120 Ga0495647_0000703 3300046681 Bacteria 9985
121 Ga0495658_0000343 3300046683 Bacteria 26108
122 Ga0495613_0003283 3300046689 Bacteria 12098
123 Ga0495649_0006629 3300046694 Bacteria 7196
124 Ga0495581_0001859 3300047315 Bacteria 11811
125 Ga0495676_0088665 3300047321 Bacteria 2319
126 Ga0496101_0126166 3300048904 Bacteria 1939
127 Ga0496102_0134877 3300048905 Bacteria 2313
128 Ga0496104_0152552 3300048907 Bacteria 2217
129 Ga0496106_0007602 3300048909 Bacteria 8017
130 Ga0496108_0379497 3300048911 Unclassified 1234
131 Ga0496112_0172166 3300048915 Bacteria 2130
132 Ga0496114_0008244 3300048917 Bacteria 8259
133 Ga0495678_048414 3300049459 Bacteria 1658
134 Ga0501034_0054027 3300049571 Bacteria 4044
135 Ga0501034_0054651 3300049571 Bacteria 4020
136 Ga0501068_0009911 3300049584 Bacteria 5339
137 Ga0501070_0079973 3300049586 Bacteria 2705
138 Ga0501073_0021880 3300049589 Bacteria 4606
139 Ga0501074_0000122 3300049590 Bacteria 39373
140 Ga0501075_0090179 3300049591 Unclassified 2326
141 Ga0501076_0025264 3300049592 Bacteria 4596
142 Ga0501079_0001928 3300049741 Bacteria 14863
143 Ga0501079_0183564 3300049741 Unclassified 1633
144 Ga0501080_0012527 3300049742 Bacteria 7777
145 Ga0501081_0130401 3300049743 Bacteria 1796
146 Ga0501083_0056608 3300049744 Bacteria 2627
147 nmdc:mga08y16_317990_c1 3300050511 Bacteria 1603
148 Ga0500635_0001479 3300053080 Bacteria 5652
149 Ga0495619_0007377 3300053085 Bacteria 6966
150 Ga0500641_0085252 3300053096 Unclassified 1344
151 Ga0500608_000336 3300053122 Bacteria 18121
152 Ga0500588_0016680 3300053146 Unclassified 1904
153 Ga0501084_0001166 3300054114 Bacteria 20502
154 Ga0496104_0041529
155 rootH2_10089984
156 rootH2_10092693
157 rootH1_10089619
158 Ga0070690_100071745
159 Ga0068869_100095391
160 Ga0070682_100045962
161 Ga0070682_100048938
162 Ga0070668_100035302
163 Ga0070675_100022575
164 Ga0070675_100053045
165 Ga0070675_100274909
166 Ga0070674_100014744
167 Ga0070674_100028447
168 Ga0070673_100018196
169 Ga0070673_100087166
170 Ga0070667_100270952
171 Ga0070700_100003631
172 Ga0070700_100138349
173 Ga0070678_100024184
174 Ga0070678_100034151
175 Ga0070685_10035939
176 Ga0070698_100110579
177 Ga0070672_100013969
178 Ga0070672_100025276
179 Ga0068856_100004638
180 Ga0068859_100069170
181 Ga0068864_100035230
182 Ga0068866_10049787
183 Ga0068861_100004463
184 Ga0068870_10010523
185 Ga0068863_100002813
186 Ga0068863_100044146
187 Ga0068858_100090859
188 Ga0068860_100004339
189 Ga0068860_100008800
190 Ga0068862_100000167
191 Ga0068862_100026263
192 Ga0097621_100017147
193 Ga0097621_100294666
194 Ga0068871_100062125
195 Ga0068865_100237356
196 Ga0097620_100069171
197 Ga0105240_10002572
198 Ga0111539_10037374
199 Ga0105245_10213512
200 Ga0105248_10009388
201 Ga0105238_10024768
202 Ga0157378_10000016
203 Ga0157378_10042792
204 Ga0163162_10226154
205 Ga0157375_10054304
206 Ga0157375_10074763
207 Ga0163163_10312464
208 Ga0163163_10384045
209 Ga0157380_10037011
210 Ga0157380_10051061
211 Ga0157380_10117853
212 Ga0157379_10003245
213 Ga0157376_10092927
214 Ga0183365_10001
215 Ga0207682_10002447
216 Ga0207662_10032386
217 Ga0207662_10073726
218 Ga0207681_10224627
219 Ga0207694_10015179
220 Ga0207706_10095552
221 Ga0207669_10103774
222 Ga0207669_10111569
223 Ga0207691_10023879
224 Ga0207691_10051998
225 Ga0207689_10043542
226 Ga0207689_10089310
227 Ga0207651_10065748
228 Ga0207651_10147801
229 Ga0207668_10017300
230 Ga0207703_10128182
231 Ga0207678_10072972
232 Ga0207708_10175976
233 Ga0207648_10028242
234 Ga0207676_10017504
235 Ga0207675_100012461
236 Ga0207675_100012676
237 Ga0207683_10012381
238 Ga0207698_10136248
239 Ga0268265_10000178
240 Ga0268265_10009393
241 Ga0268265_10077642
242 Ga0268264_10044346
243 Ga0307512_10098940
244 Ga0307513_10011176
245 Ga0307513_10013578
246 Ga0307513_10104648
247 Ga0307509_10012968
248 Ga0307508_10102450
249 Ga0307516_10065922
250 Ga0307416_100070361
251 Ga0307510_10019226
252 Ga0373943_0011720
253 Ga0373946_0016459
254 Ga0373935_0005606
255 Ga0373927_0010529
256 Ga0373927_0051107
257 Ga0373933_0139754
258 Ga0373947_0076320
259 Ga0373937_0068703
260 Ga0373925_0037916
261 Ga0395905_0000230
262 Ga0495603_0000093
263 Ga0495590_0020606
264 Ga0495629_0003143
265 Ga0495580_0005947
266 Ga0495582_0001324
267 Ga0495639_0009700
268 Ga0495594_0000985
269 Ga0495665_0014730
270 Ga0495622_0049423
271 Ga0495625_0026764
272 Ga0495588_0015183
273 Ga0495647_0000703
274 Ga0495658_0000343
275 Ga0495613_0003283
276 Ga0495649_0006629
277 Ga0495581_0001859
278 Ga0495676_0088665
279 Ga0496101_0126166
280 Ga0496102_0134877
281 Ga0496104_0152552
282 Ga0496106_0007602
283 Ga0496108_0379497
284 Ga0496112_0172166
285 Ga0496114_0008244
286 Ga0495678_048414
287 Ga0501034_0054027
288 Ga0501034_0054651
289 Ga0501068_0009911
290 Ga0501070_0079973
291 Ga0501073_0021880
292 Ga0501074_0000122
293 Ga0501075_0090179
294 Ga0501076_0025264
295 Ga0501079_0001928
296 Ga0501079_0183564
297 Ga0501080_0012527
298 Ga0501081_0130401
299 Ga0501083_0056608
300 nmdc:mga08y16_317990_c1
301 Ga0500635_0001479
302 Ga0495619_0007377
303 Ga0500641_0085252
304 Ga0500608_000336
305 Ga0500588_0016680
306 Ga0501084_0001166

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

21

69

0.91

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

24

72

0.85

PF01266

DAO

FAD dependent oxidoreductase

21

408

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a3x-assembly1.cif.gz_B imine reductase from ensifer adhaerens in complex with nadp+ 0.9748 5 34
5a9r-assembly1.cif.gz_A apo form of imine reductase from amycolatopsis orientalis 0.9637 5 35
6aa8-assembly1.cif.gz_F crystal structure of (s)-3-hydroxybutyryl-coenzymea dehydrogenase from clostridium acetobutylicum complexed with nad+ 0.9548 5 36
7bke-assembly1.cif.gz_a formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodisulfide reductase core and mobile arm in conformational state 2, composite structure) 0.941 3 34
3k96-assembly1.cif.gz_B 2.1 angstrom resolution crystal structure of glycerol-3-phosphate dehydrogenase (gpsa) from coxiella burnetii 0.9358 3 34
ID Description Score Start End Superfamily
af_O61709_2_252_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9878 6 35 3.40.50.720
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9737 6 32 3.50.50.60
af_Q58454_1_196_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9569 5 36 3.40.50.720
af_Q57871_2_201_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9515 5 36 3.40.50.720
2vq3B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9515 5 34 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6M4HBK8-F1-model_v4 D-amino acid dehydrogenase 1 (EC 1.4.99.-) 0.9522 9 413 GO:0005737
GO:0016491
AF-A0A534AM75-F1-model_v4 FAD-binding oxidoreductase 0.948 1 358 GO:0005737
AF-A0A6M4HBK8-F1-model_v4 D-amino acid dehydrogenase 1 (EC 1.4.99.-) 0.9475 9 413 GO:0005737
GO:0016491
AF-A0A534AM75-F1-model_v4 FAD-binding oxidoreductase 0.9428 1 358 GO:0005737
AF-H0HYF2-F1-model_v4 D-amino-acid dehydrogenase 0.9278 3 414 GO:0005737

Map