F217399
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 153 | 133 | 122 | 707 |
Family's Representative Sequence
| Representative Sequence | 3300031730|Ga0307516_10002943|Ga0307516_100029432 |
| Length | 744 |
| Sequence | MCYHPVQFEPRGSCDLNGLCQWDRGGDHGMNQRYRPLPCCFALAILVAFSSDATALARHKQVQHDKNAHAASKPGHQRLTALPSSDEPSPAAASNLSGDLAAVKQAIELARKSDFGGASAIEKTIDDPAGRKLVEWFLLRHPDSNANFSRYAAFIADNPGWPSMSPMRRRAEARLWQEQSDAATLHGFTGDQPVTAKGRFALARVLLAEGDRDGAARRVREAWRSEELSERAEAEAFDTFHDLLTRDDHRARMDKRIGAKDFSGAMRAAHRLGSDELSIVKACAAVAGNEDKALDLLDRVATGARQDLGYALCRIHWMLRHDRIEDAARLMLAAAAETMERQDTDEWWRERRVLARKLLDLGKFQAAYQVVREAALPANENYRAEFHFMSGWIALRYLNDPSTSRAHFAHIDDGTANPIVIARAHYWRGRAAEAAGDIEGMRAEYEAAARHSTAYYGQMARAKLGLETIELRKPPTADPGSSAALSDERVRAADMLYTLGERDVARSFVTDLADESVDTAVLAALGELTVHRDDAHGTLQIGKTALARGLALDHYAFPTIGIPQHSPIGPAIARSVIYSVARTESAFDQRDKSSANAVGLMQVTPEAGRDTAKRFGVSYDWDRMVSDPVYNTQMGAAELSALLSEYRGCHIMTFAGYNAGRGRVREWVKQHGDPRDPNVDAIDWVERIPLAETRNYVQRVMENLLVYRVRFEADVTVSKADHDRQTRQEVVSTPLSSTEASAGE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2508501128 | Bradyrhizobium sp. ARR65 | Isolate | Nodule |
| 2 | 2513237096 | Bradyrhizobium pachyrhizi USDA 3259 | Isolate | Nodule |
| 3 | 2513237137 | Bradyrhizobium elkanii USDA 94 | Isolate | Nodule |
| 4 | 2513237141 | Bradyrhizobium sp. TV2a.2 | Isolate | Nodule |
| 5 | 2513237145 | Bradyrhizobium elkanii USDA 3254 | Isolate | Nodule |
| 6 | 2517572143 | Bradyrhizobium elkanii USDA 76 | Isolate | Nodule |
| 7 | 2524023210 | Bradyrhizobium sp. Ai1a-2 | Isolate | Nodule |
| 8 | 2524023228 | Bradyrhizobium sp. Th.b2 | Isolate | Nodule |
| 9 | 2667528175 | Rhizobium tropici NFR14 | Isolate | Rhizoplane |
| 10 | 2728368998 | Bradyrhizobium macuxiense BR 10303 | Isolate | Nodule |
| 11 | 2791355197 | Bradyrhizobium sp. C9 | Isolate | Nodule |
| 12 | 2885374607 | Bradyrhizobium sp. NAS96.2 | Isolate | Unclassified |
| 13 | 2903748898 | Bradyrhizobium uaiense UFLA 03-164 | Isolate | Nodule |
| 14 | 2904690495 | Bradyrhizobium ivorense CI-1B | Isolate | Nodule |
| 15 | 2904699407 | |||
| 16 | 2906610324 | |||
| 17 | 2906635258 | Bradyrhizobium sp. USDA 3458 | Isolate | Unclassified |
| 18 | 2906660503 | Bradyrhizobium brasilense UFLA 03-321 | Isolate | Unclassified |
| 19 | 2908739725 | Bradyrhizobium sp. UFLA03-84 | Isolate | Nodule |
| 20 | 2908756301 | Bradyrhizobium ivorense CI-41S | Isolate | Nodule |
| 21 | 2922425934 | |||
| 22 | 2935630451 | Bradyrhizobium sp. I1.14.4 | Isolate | Nodule |
| 23 | 2941507105 | Bradyrhizobium sp. i1.12.3 | Isolate | Nodule |
| 24 | 2941515067 | Bradyrhizobium sp. i1.14.1 | Isolate | Nodule |
| 25 | 2941523033 | Bradyrhizobium sp. i1.8.4 | Isolate | Nodule |
| 26 | 3005474847 | Bradyrhizobium sp. CCBAU 53421 | Isolate | Nodule |
| 27 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 31 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 33 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 34 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 36 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 37 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 38 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 39 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 41 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 42 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 43 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 44 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 45 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 47 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 48 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 49 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300006942 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW | Metagenome | Nodule |
| 51 | 3300006943 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW | Metagenome | Nodule |
| 52 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 58 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300027357 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 72 | 3300027361 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 73 | 3300027363 | Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) | Metagenome | Nodule |
| 74 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 77 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 78 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 79 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 80 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 81 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 82 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 83 | 3300033442 | Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 | Metagenome | Nodule |
| 84 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 85 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 86 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 87 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 88 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 89 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 90 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 91 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 92 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 93 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 94 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 95 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 96 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 97 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 98 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 112 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 113 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 114 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 115 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 116 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 117 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 118 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 119 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 120 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 121 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 125 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 126 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 127 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 128 | 3300053737 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere | Metagenome | Endosphere |
| 129 | 8006973647 | Bradyrhizobium septentrionale 162S2 | Isolate | Nodule |
| 130 | 8019555841 | Bradyrhizobium sp. JR6.1 | Isolate | Nodule |
| 131 | 8019565922 | Bradyrhizobium sp. JR3.5 | Isolate | Nodule |
| 132 | 8056681323 | Bradyrhizobium cenepequi CNPSo 4026 | Isolate | Nodule |
| 133 | 8056689827 | Bradyrhizobium semiaridum WSM 1704 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 81.33 |
| Metatranscriptomes | 0 |
| Isolates | 18.67 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 7.19 |
| Nodule | 19.61 |
| Rhizoplane | 3.92 |
| Rhizosphere | 56.21 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 13.07 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070680_100074489 | 3300005336 | Bacteria | 2793 |
| 2 | Ga0070671_100043363 | 3300005355 | Bacteria | 3738 |
| 3 | Ga0070673_100052099 | 3300005364 | Bacteria | 3210 |
| 4 | Ga0070709_10000742 | 3300005434 | Bacteria | 18446 |
| 5 | Ga0070714_100002959 | 3300005435 | Bacteria | 12588 |
| 6 | Ga0070714_100009530 | 3300005435 | Bacteria | 7639 |
| 7 | Ga0070713_100057378 | 3300005436 | Bacteria | 3242 |
| 8 | Ga0070710_10000584 | 3300005437 | Bacteria | 17316 |
| 9 | Ga0070711_100013646 | 3300005439 | Bacteria | 5105 |
| 10 | Ga0070707_100054957 | 3300005468 | Bacteria | 3817 |
| 11 | Ga0070679_100025196 | 3300005530 | Bacteria | 5834 |
| 12 | Ga0070697_100017578 | 3300005536 | Bacteria | 5629 |
| 13 | Ga0068853_100056765 | 3300005539 | Bacteria | 3377 |
| 14 | Ga0070665_100026866 | 3300005548 | Bacteria | 5798 |
| 15 | Ga0068855_100106460 | 3300005563 | Bacteria | 3223 |
| 16 | Ga0068856_100116348 | 3300005614 | Bacteria | 2674 |
| 17 | Ga0068860_100000113 | 3300005843 | Bacteria | 130939 |
| 18 | Ga0081540_1008865 | 3300005983 | Bacteria | 6983 |
| 19 | Ga0081540_1009618 | 3300005983 | Bacteria | 6647 |
| 20 | Ga0081539_10026924 | 3300005985 | Bacteria | 3654 |
| 21 | Ga0070717_10007173 | 3300006028 | Bacteria | 8259 |
| 22 | Ga0075363_100010065 | 3300006048 | Bacteria | 4471 |
| 23 | Ga0070712_100009462 | 3300006175 | Bacteria | 6140 |
| 24 | Ga0075362_10023923 | 3300006177 | Bacteria | 2587 |
| 25 | Ga0097621_100031776 | 3300006237 | Bacteria | 4190 |
| 26 | Ga0099824_1008015 | 3300006942 | Bacteria | 13690 |
| 27 | Ga0099822_1000056 | 3300006943 | Bacteria | 56915 |
| 28 | Ga0105240_10065327 | 3300009093 | Bacteria | 4517 |
| 29 | Ga0105241_10043370 | 3300009174 | Bacteria | 3407 |
| 30 | Ga0105237_10004533 | 3300009545 | Bacteria | 16049 |
| 31 | Ga0157370_10053712 | 3300013104 | Bacteria | 3842 |
| 32 | Ga0163162_10106695 | 3300013306 | Bacteria | 2896 |
| 33 | Ga0213876_10003563 | 3300021384 | Bacteria | 8862 |
| 34 | Ga0209758_1010981 | 3300025297 | Bacteria | 5319 |
| 35 | Ga0207692_10000518 | 3300025898 | Bacteria | 13680 |
| 36 | Ga0207699_10000331 | 3300025906 | Bacteria | 25032 |
| 37 | Ga0207699_10010107 | 3300025906 | Bacteria | 4722 |
| 38 | Ga0207707_10020046 | 3300025912 | Bacteria | 5834 |
| 39 | Ga0207663_10025401 | 3300025916 | Bacteria | 3424 |
| 40 | Ga0207700_10004788 | 3300025928 | Bacteria | 8030 |
| 41 | Ga0207664_10006471 | 3300025929 | Bacteria | 8060 |
| 42 | Ga0207664_10055490 | 3300025929 | Bacteria | 3144 |
| 43 | Ga0207644_10017697 | 3300025931 | Bacteria | 4819 |
| 44 | Ga0207665_10001600 | 3300025939 | Bacteria | 15255 |
| 45 | Ga0207665_10039684 | 3300025939 | Bacteria | 3139 |
| 46 | Ga0207661_10001176 | 3300025944 | Bacteria | 17500 |
| 47 | Ga0207667_10089118 | 3300025949 | Bacteria | 3189 |
| 48 | Ga0207676_10012695 | 3300026095 | Bacteria | 6043 |
| 49 | Ga0207674_10014054 | 3300026116 | Bacteria | 8847 |
| 50 | Ga0209589_1000003 | 3300027357 | Bacteria | 629130 |
| 51 | Ga0209489_100003 | 3300027361 | Bacteria | 663105 |
| 52 | Ga0209700_100003 | 3300027363 | Bacteria | 663105 |
| 53 | Ga0268266_10011695 | 3300028379 | Bacteria | 7615 |
| 54 | Ga0268264_10000035 | 3300028381 | Bacteria | 398196 |
| 55 | Ga0265332_10008334 | 3300031238 | Bacteria | 4658 |
| 56 | Ga0265339_10003025 | 3300031249 | Bacteria | 11858 |
| 57 | Ga0265331_10018946 | 3300031250 | Bacteria | 3558 |
| 58 | Ga0307509_10049560 | 3300031507 | Bacteria | 4501 |
| 59 | Ga0307508_10000021 | 3300031616 | Bacteria | 183823 |
| 60 | Ga0307508_10068802 | 3300031616 | Bacteria | 3111 |
| 61 | Ga0307516_10002943 | 3300031730 | Bacteria | 22314 |
| 62 | Ga0307516_10098918 | 3300031730 | Bacteria | 2735 |
| 63 | Ga0307507_10068026 | 3300033179 | Bacteria | 3253 |
| 64 | Ga0315911_1000001 | 3300033442 | Bacteria | 1088602 |
| 65 | Ga0373936_0012780 | 3300035113 | Bacteria | 3199 |
| 66 | Ga0373956_0003115 | 3300035119 | Bacteria | 6702 |
| 67 | Ga0373956_0011994 | 3300035119 | Bacteria | 3582 |
| 68 | Ga0373956_0019945 | 3300035119 | Bacteria | 2848 |
| 69 | Ga0373957_0002947 | 3300035120 | Bacteria | 4933 |
| 70 | Ga0373955_0000863 | 3300035172 | Bacteria | 12977 |
| 71 | Ga0373924_0010089 | 3300035410 | Bacteria | 3477 |
| 72 | Ga0373935_0014127 | 3300035692 | Bacteria | 4821 |
| 73 | Ga0373927_0009996 | 3300035695 | Bacteria | 6358 |
| 74 | Ga0373927_0012764 | 3300035695 | Bacteria | 5589 |
| 75 | Ga0373933_0005405 | 3300035724 | Bacteria | 6952 |
| 76 | Ga0373937_0027796 | 3300036401 | Bacteria | 5117 |
| 77 | Ga0373937_0040758 | 3300036401 | Bacteria | 4234 |
| 78 | Ga0373937_0055891 | 3300036401 | Bacteria | 3624 |
| 79 | Ga0373925_0016782 | 3300037068 | Bacteria | 5302 |
| 80 | Ga0373925_0031745 | 3300037068 | Bacteria | 3884 |
| 81 | Ga0436365_1269649 | 3300039437 | Bacteria | 21588 |
| 82 | Ga0436362_0440266 | 3300039453 | Bacteria | 4839 |
| 83 | Ga0466966_0035070 | 3300044684 | Bacteria | 3243 |
| 84 | Ga0466957_0020316 | 3300044842 | Bacteria | 3908 |
| 85 | Ga0495653_0028809 | 3300046463 | Bacteria | 4439 |
| 86 | Ga0495653_0040761 | 3300046463 | Bacteria | 3627 |
| 87 | Ga0495664_0056279 | 3300046477 | Bacteria | 2339 |
| 88 | Ga0495628_0022279 | 3300046516 | Bacteria | 5205 |
| 89 | Ga0495640_0010988 | 3300046533 | Bacteria | 6974 |
| 90 | Ga0495640_0043879 | 3300046533 | Bacteria | 3111 |
| 91 | Ga0495645_0019822 | 3300046543 | Bacteria | 4846 |
| 92 | Ga0495635_0021238 | 3300046663 | Bacteria | 4525 |
| 93 | Ga0495657_0013694 | 3300046675 | Bacteria | 5974 |
| 94 | Ga0495599_0016991 | 3300046678 | Bacteria | 4520 |
| 95 | Ga0495599_0017335 | 3300046678 | Bacteria | 4477 |
| 96 | Ga0495604_0014761 | 3300047317 | Bacteria | 6226 |
| 97 | Ga0495674_0022150 | 3300047319 | Bacteria | 5863 |
| 98 | Ga0495680_0039403 | 3300047322 | Bacteria | 3770 |
| 99 | Ga0495684_0024391 | 3300047471 | Bacteria | 4655 |
| 100 | Ga0495684_0040347 | 3300047471 | Bacteria | 3579 |
| 101 | Ga0496100_0022891 | 3300048903 | Bacteria | 3787 |
| 102 | Ga0496102_0030665 | 3300048905 | Bacteria | 4814 |
| 103 | Ga0496104_0049619 | 3300048907 | Bacteria | 3958 |
| 104 | Ga0496106_0002830 | 3300048909 | Bacteria | 12873 |
| 105 | Ga0496115_0051681 | 3300048918 | Bacteria | 3295 |
| 106 | Ga0496118_0007407 | 3300048921 | Bacteria | 11644 |
| 107 | Ga0496121_0001142 | 3300048924 | Bacteria | 46580 |
| 108 | Ga0496121_0001698 | 3300048924 | Bacteria | 36180 |
| 109 | Ga0496124_0002522 | 3300048927 | Bacteria | 23785 |
| 110 | Ga0496125_0073366 | 3300048928 | Bacteria | 2661 |
| 111 | Ga0496126_0012071 | 3300048929 | Bacteria | 8878 |
| 112 | nmdc:mga07m45_18132_c1 | 3300050496 | Bacteria | 3794 |
| 113 | nmdc:mga05p37_171538_c1 | 3300050507 | Bacteria | 2645 |
| 114 | Ga0495601_0028925 | 3300053077 | Bacteria | 3435 |
| 115 | Ga0495612_0004491 | 3300053078 | Bacteria | 5792 |
| 116 | Ga0500566_0024760 | 3300053094 | Bacteria | 3521 |
| 117 | Ga0500595_001240 | 3300053119 | Bacteria | 14053 |
| 118 | Ga0500595_001855 | 3300053119 | Bacteria | 10934 |
| 119 | Ga0500595_003750 | 3300053119 | Bacteria | 7002 |
| 120 | Ga0500636_0004318 | 3300053177 | Bacteria | 8045 |
| 121 | Ga0500637_0007315 | 3300053178 | Bacteria | 5513 |
| 122 | Ga0500601_000185 | 3300053737 | Bacteria | 12852 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005355 | Ga0070671_100043363 | Ga0070671_1000433632 | 630 |
| 2 | 3300005364 | Ga0070673_100052099 | Ga0070673_1000520992 | 630 |
| 3 | 3300025931 | Ga0207644_10017697 | Ga0207644_100176973 | 631 |
| 4 | 3300048903 | Ga0496100_0022891 | Ga0496100_0022891_784_3042 | 631 |
| 5 | 3300021384 | Ga0213876_10003563 | Ga0213876_100035636 | 637 |
| 6 | 3300039437 | Ga0436365_1269649 | Ga0436365_1269649_10776_12980 | 637 |
| 7 | 3300005434 | Ga0070709_10000742 | Ga0070709_100007424 | 649 |
| 8 | 3300005435 | Ga0070714_100002959 | Ga0070714_1000029591 | 649 |
| 9 | 3300005437 | Ga0070710_10000584 | Ga0070710_100005848 | 649 |
| 10 | 3300006175 | Ga0070712_100009462 | Ga0070712_1000094622 | 649 |
| 11 | 3300025898 | Ga0207692_10000518 | Ga0207692_100005186 | 649 |
| 12 | 3300025906 | Ga0207699_10000331 | Ga0207699_100003318 | 649 |
| 13 | 3300025929 | Ga0207664_10006471 | Ga0207664_100064714 | 649 |
| 14 | 3300025939 | Ga0207665_10001600 | Ga0207665_100016007 | 649 |
| 15 | 3300035119 | Ga0373956_0011994 | Ga0373956_0011994_1571_3568 | 651 |
| 16 | 3300036401 | Ga0373937_0040758 | Ga0373937_0040758_259_2451 | 651 |
| 17 | 3300046477 | Ga0495664_0056279 | Ga0495664_0056279_44_2128 | 651 |
| 18 | 3300047319 | Ga0495674_0022150 | Ga0495674_0022150_40_2124 | 651 |
| 19 | 3300025297 | Ga0209758_1010981 | Ga0209758_10109813 | 655 |
| 20 | 3300005436 | Ga0070713_100057378 | Ga0070713_1000573781 | 656 |
| 21 | 3300025929 | Ga0207664_10055490 | Ga0207664_100554903 | 656 |
| 22 | 3300005983 | Ga0081540_1008865 | Ga0081540_10088653 | 657 |
| 23 | 3300035692 | Ga0373935_0014127 | Ga0373935_0014127_2321_4456 | 658 |
| 24 | 3300037068 | Ga0373925_0031745 | Ga0373925_0031745_553_2688 | 658 |
| 25 | 3300047471 | Ga0495684_0040347 | Ga0495684_0040347_292_2553 | 658 |
| 26 | 3300048907 | Ga0496104_0049619 | Ga0496104_0049619_699_2834 | 658 |
| 27 | 3300035119 | Ga0373956_0019945 | Ga0373956_0019945_55_2316 | 661 |
| 28 | 3300035410 | Ga0373924_0010089 | Ga0373924_0010089_149_2410 | 661 |
| 29 | 3300031249 | Ga0265339_10003025 | Ga0265339_100030253 | 662 |
| 30 | 3300031616 | Ga0307508_10068802 | Ga0307508_100688021 | 665 |
| 31 | 3300025906 | Ga0207699_10010107 | Ga0207699_100101072 | 666 |
| 32 | 3300046463 | Ga0495653_0040761 | Ga0495653_0040761_26_2287 | 667 |
| 33 | 3300009545 | Ga0105237_10004533 | Ga0105237_100045339 | 668 |
| 34 | 3300033442 | Ga0315911_1000001 | Ga0315911_1000001929 | 670 |
| 35 | 3300035113 | Ga0373936_0012780 | Ga0373936_0012780_35_2170 | 670 |
| 36 | 3300053177 | Ga0500636_0004318 | Ga0500636_0004318_5010_7190 | 671 |
| 37 | 3300006942 | Ga0099824_1008015 | Ga0099824_10080156 | 673 |
| 38 | 3300027357 | Ga0209589_1000003 | Ga0209589_1000003130 | 673 |
| 39 | 3300027361 | Ga0209489_100003 | Ga0209489_100003181 | 673 |
| 40 | 3300027363 | Ga0209700_100003 | Ga0209700_100003181 | 673 |
| 41 | 3300036401 | Ga0373937_0055891 | Ga0373937_0055891_1375_3564 | 673 |
| 42 | 3300006943 | Ga0099822_1000056 | Ga0099822_100005632 | 674 |
| 43 | 3300050496 | nmdc:mga07m45_18132_c1 | nmdc:mga07m45_18132_c1_1146_3371 | 674 |
| 44 | 3300053737 | Ga0500601_000185 | Ga0500601_000185_180_2366 | 674 |
| 45 | 3300005843 | Ga0068860_100000113 | Ga0068860_10000011331 | 676 |
| 46 | 3300013306 | Ga0163162_10106695 | Ga0163162_101066953 | 676 |
| 47 | 3300028381 | Ga0268264_10000035 | Ga0268264_10000035325 | 676 |
| 48 | 3300048924 | Ga0496121_0001142 | Ga0496121_0001142_44178_46550 | 676 |
| 49 | 3300005548 | Ga0070665_100026866 | Ga0070665_1000268664 | 677 |
| 50 | 3300006048 | Ga0075363_100010065 | Ga0075363_1000100654 | 677 |
| 51 | 3300028379 | Ga0268266_10011695 | Ga0268266_100116956 | 677 |
| 52 | 3300005563 | Ga0068855_100106460 | Ga0068855_1001064601 | 678 |
| 53 | 3300005614 | Ga0068856_100116348 | Ga0068856_1001163481 | 678 |
| 54 | 3300006237 | Ga0097621_100031776 | Ga0097621_1000317763 | 678 |
| 55 | 3300009174 | Ga0105241_10043370 | Ga0105241_100433702 | 678 |
| 56 | 3300025949 | Ga0207667_10089118 | Ga0207667_100891181 | 678 |
| 57 | 3300026095 | Ga0207676_10012695 | Ga0207676_100126952 | 678 |
| 58 | 3300026116 | Ga0207674_10014054 | Ga0207674_100140542 | 678 |
| 59 | 3300031238 | Ga0265332_10008334 | Ga0265332_100083344 | 678 |
| 60 | 3300048928 | Ga0496125_0073366 | Ga0496125_0073366_351_2552 | 678 |
| 61 | iso_pu_bacteria | 2517572143 | 2517892957 | 678 |
| 62 | iso_pu_bacteria | 2524023228 | 2524536949 | 678 |
| 63 | iso_pu_bacteria | 2791355197 | 2793073055 | 678 |
| 64 | iso_pu_bacteria | 2903748898 | 2903757733 | 678 |
| 65 | iso_pu_bacteria | 2906610324 | 2906618052 | 678 |
| 66 | iso_pu_bacteria | 2908739725 | 2908743350 | 678 |
| 67 | iso_pu_bacteria | 3005474847 | 3005479707 | 678 |
| 68 | iso_pu_bacteria | 2728368998 | 2728750471 | 679 |
| 69 | iso_pu_bacteria | 2908756301 | 2908760850 | 679 |
| 70 | 3300039453 | Ga0436362_0440266 | Ga0436362_0440266_340_2538 | 680 |
| 71 | 3300044684 | Ga0466966_0035070 | Ga0466966_0035070_887_3061 | 680 |
| 72 | 3300044842 | Ga0466957_0020316 | Ga0466957_0020316_414_2588 | 680 |
| 73 | 3300046516 | Ga0495628_0022279 | Ga0495628_0022279_243_2456 | 680 |
| 74 | 3300025944 | Ga0207661_10001176 | Ga0207661_100011765 | 681 |
| 75 | iso_pu_bacteria | 2513237096 | 2513656812 | 682 |
| 76 | iso_pu_bacteria | 2513237137 | 2513858001 | 682 |
| 77 | iso_pu_bacteria | 2513237141 | 2513887384 | 682 |
| 78 | iso_pu_bacteria | 2513237145 | 2513917997 | 682 |
| 79 | iso_pu_bacteria | 2667528175 | 2671117584 | 682 |
| 80 | iso_pu_bacteria | 2904699407 | 2904703117 | 682 |
| 81 | iso_pu_bacteria | 2906635258 | 2906639428 | 682 |
| 82 | iso_pu_bacteria | 2906660503 | 2906661536 | 682 |
| 83 | iso_pu_bacteria | 2922425934 | 2922429547 | 682 |
| 84 | iso_pu_bacteria | 2935630451 | 2935633588 | 682 |
| 85 | iso_pu_bacteria | 2941507105 | 2941510479 | 682 |
| 86 | iso_pu_bacteria | 2941515067 | 2941517783 | 682 |
| 87 | iso_pu_bacteria | 2941523033 | 2941525800 | 682 |
| 88 | iso_pu_bacteria | 8006973647 | 8006981106 | 682 |
| 89 | iso_pu_bacteria | 8019555841 | 8019557319 | 682 |
| 90 | iso_pu_bacteria | 8019565922 | 8019567983 | 682 |
| 91 | iso_pu_bacteria | 8056689827 | 8056690063 | 682 |
| 92 | 3300025939 | Ga0207665_10039684 | Ga0207665_100396841 | 683 |
| 93 | iso_pu_bacteria | 2508501128 | 2509148708 | 683 |
| 94 | iso_pu_bacteria | 2885374607 | 2885375138 | 683 |
| 95 | 3300005983 | Ga0081540_1009618 | Ga0081540_10096182 | 684 |
| 96 | iso_pu_bacteria | 2904690495 | 2904696365 | 684 |
| 97 | 3300033179 | Ga0307507_10068026 | Ga0307507_100680261 | 685 |
| 98 | 3300035695 | Ga0373927_0009996 | Ga0373927_0009996_2019_4313 | 685 |
| 99 | 3300037068 | Ga0373925_0016782 | Ga0373925_0016782_2721_4973 | 685 |
| 100 | 3300005985 | Ga0081539_10026924 | Ga0081539_100269242 | 686 |
| 101 | 3300053119 | Ga0500595_003750 | Ga0500595_003750_2576_4759 | 686 |
| 102 | iso_pu_bacteria | 2524023210 | 2524465151 | 686 |
| 103 | 3300005435 | Ga0070714_100009530 | Ga0070714_1000095303 | 687 |
| 104 | 3300006177 | Ga0075362_10023923 | Ga0075362_100239231 | 687 |
| 105 | 3300031250 | Ga0265331_10018946 | Ga0265331_100189463 | 687 |
| 106 | 3300050507 | nmdc:mga05p37_171538_c1 | nmdc:mga05p37_171538_c1_200_2401 | 687 |
| 107 | 3300053094 | Ga0500566_0024760 | Ga0500566_0024760_1222_3426 | 687 |
| 108 | 3300053119 | Ga0500595_001855 | Ga0500595_001855_2553_4757 | 687 |
| 109 | 3300053178 | Ga0500637_0007315 | Ga0500637_0007315_3140_5344 | 687 |
| 110 | iso_pu_bacteria | 8056681323 | 8056683291 | 687 |
| 111 | 3300005439 | Ga0070711_100013646 | Ga0070711_1000136461 | 688 |
| 112 | 3300005468 | Ga0070707_100054957 | Ga0070707_1000549571 | 688 |
| 113 | 3300005536 | Ga0070697_100017578 | Ga0070697_1000175784 | 688 |
| 114 | 3300005539 | Ga0068853_100056765 | Ga0068853_1000567652 | 688 |
| 115 | 3300025916 | Ga0207663_10025401 | Ga0207663_100254012 | 688 |
| 116 | 3300031507 | Ga0307509_10049560 | Ga0307509_100495602 | 688 |
| 117 | 3300031730 | Ga0307516_10098918 | Ga0307516_100989181 | 688 |
| 118 | 3300035119 | Ga0373956_0003115 | Ga0373956_0003115_348_2558 | 688 |
| 119 | 3300035120 | Ga0373957_0002947 | Ga0373957_0002947_2064_4274 | 688 |
| 120 | 3300035172 | Ga0373955_0000863 | Ga0373955_0000863_6778_8988 | 688 |
| 121 | 3300035724 | Ga0373933_0005405 | Ga0373933_0005405_1049_3259 | 688 |
| 122 | 3300036401 | Ga0373937_0027796 | Ga0373937_0027796_2042_4252 | 688 |
| 123 | 3300046533 | Ga0495640_0043879 | Ga0495640_0043879_127_2337 | 688 |
| 124 | 3300046678 | Ga0495599_0016991 | Ga0495599_0016991_2300_4510 | 688 |
| 125 | 3300048905 | Ga0496102_0030665 | Ga0496102_0030665_608_2833 | 688 |
| 126 | 3300048909 | Ga0496106_0002830 | Ga0496106_0002830_9885_12092 | 688 |
| 127 | 3300048918 | Ga0496115_0051681 | Ga0496115_0051681_846_3071 | 688 |
| 128 | 3300048921 | Ga0496118_0007407 | Ga0496118_0007407_7727_9934 | 688 |
| 129 | 3300048924 | Ga0496121_0001698 | Ga0496121_0001698_23970_26177 | 688 |
| 130 | 3300048927 | Ga0496124_0002522 | Ga0496124_0002522_5337_7544 | 688 |
| 131 | 3300048929 | Ga0496126_0012071 | Ga0496126_0012071_442_2649 | 688 |
| 132 | 3300013104 | Ga0157370_10053712 | Ga0157370_100537121 | 689 |
| 133 | 3300031616 | Ga0307508_10000021 | Ga0307508_1000002140 | 689 |
| 134 | 3300031730 | Ga0307516_10002943 | Ga0307516_100029432 | 689 |
| 135 | 3300035695 | Ga0373927_0012764 | Ga0373927_0012764_153_2366 | 689 |
| 136 | 3300046463 | Ga0495653_0028809 | Ga0495653_0028809_534_2747 | 689 |
| 137 | 3300046533 | Ga0495640_0010988 | Ga0495640_0010988_4387_6600 | 689 |
| 138 | 3300046543 | Ga0495645_0019822 | Ga0495645_0019822_2381_4594 | 689 |
| 139 | 3300046663 | Ga0495635_0021238 | Ga0495635_0021238_1972_4185 | 689 |
| 140 | 3300046675 | Ga0495657_0013694 | Ga0495657_0013694_2523_4736 | 689 |
| 141 | 3300046678 | Ga0495599_0017335 | Ga0495599_0017335_68_2281 | 689 |
| 142 | 3300047317 | Ga0495604_0014761 | Ga0495604_0014761_1874_4087 | 689 |
| 143 | 3300047322 | Ga0495680_0039403 | Ga0495680_0039403_1406_3619 | 689 |
| 144 | 3300047471 | Ga0495684_0024391 | Ga0495684_0024391_2073_4286 | 689 |
| 145 | 3300053077 | Ga0495601_0028925 | Ga0495601_0028925_651_2837 | 689 |
| 146 | 3300053078 | Ga0495612_0004491 | Ga0495612_0004491_1051_3264 | 689 |
| 147 | 3300006028 | Ga0070717_10007173 | Ga0070717_100071735 | 690 |
| 148 | 3300025928 | Ga0207700_10004788 | Ga0207700_100047883 | 691 |
| 149 | 3300053119 | Ga0500595_001240 | Ga0500595_001240_11217_13595 | 691 |
| 150 | 3300005336 | Ga0070680_100074489 | Ga0070680_1000744891 | 692 |
| 151 | 3300005530 | Ga0070679_100025196 | Ga0070679_1000251963 | 692 |
| 152 | 3300009093 | Ga0105240_10065327 | Ga0105240_100653271 | 692 |
| 153 | 3300025912 | Ga0207707_10020046 | Ga0207707_100200461 | 692 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3kd7-assembly2.cif.gz_B | designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) | 0.8446 | 299 | 402 |
| 7obe-assembly1.cif.gz_A | x-ray structure of the phosphatase papp5 from arabidopsis thaliana | 0.8419 | 299 | 402 |
| 2wqh-assembly1.cif.gz_A-2 | crystal structure of ctpr3y3 | 0.8379 | 299 | 402 |
| 3kd7-assembly5.cif.gz_E | designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) | 0.8313 | 302 | 402 |
| 1na3-assembly1.cif.gz_A | design of stable alpha-helical arrays from an idealized tpr motif | 0.8312 | 335 | 418 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1slyA03 | Mainly Alpha;Orthogonal Bundle;Lysozyme; | 0.936 | 524 | 663 | 1.10.530.10 |
| af_O95801_68_156_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.9096 | 331 | 402 | 1.25.40.10 |
| af_A0A0P0XJZ6_148_261_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.869 | 299 | 402 | 1.25.40.10 |
| af_F4J4V1_550_664_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.8574 | 299 | 402 | 1.25.40.10 |
| af_P38042_638_741_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.857 | 299 | 402 | 1.25.40.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6G1W9M8-F1-model_v4 | deleted | 0.9542 | 527 | 656 |
|
| AF-A0A3C0QJ65-F1-model_v4 | Transglycosylase SLT domain-containing protein | 0.9255 | 525 | 663 |
GO:0000270
GO:0008933 GO:0016020 |
| AF-A0A537PM28-F1-model_v4 | Lytic transglycosylase domain-containing protein | 0.9228 | 333 | 686 |
GO:0004553
GO:0042597 |
| AF-A0A3B9S0Q9-F1-model_v4 | Lytic transglycosylase | 0.9221 | 524 | 664 |
GO:0000270
GO:0008933 GO:0016020 |
| AF-A0A537PM28-F1-model_v4 | Lytic transglycosylase domain-containing protein | 0.9125 | 333 | 686 |
GO:0004553
GO:0042597 |
Predicted Structure (AlphaFold2)
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