F216357
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 153 | 128 | 153 | 337 |
Family's Representative Sequence
| Representative Sequence | 3300005458|Ga0070681_10095711|Ga0070681_100957114 |
| Length | 360 |
| Sequence | VPTASIFAERFASQGLAGPPAREAADVAGRLLAVQGQDPRGARLAIRARSEGLAAADVDRALSEERSLLITWLNRGTLHLVRSEDYPWLQMLTTPPLLTSCSRRLHQEGVTAQEGEKAVKTIERSLAEEGPLTRHQLRKRLDSAGVPTAGQALVHLLFLAAVRGVVVRGPMAGRDHAYVLVADWLDRAKPVDRDPALAELARRYLVGHAPADDRDLARWAGLPLRDARAGLAAIASELVEREDGLVHLAKCPPAAEVPGPRLLGAFDPLLLGWTSRKLILGPHTHLVTMNGIFRPFAMVRGRAVATWKLNRGKVTLEPLGRISKQASAALAADAADVERFMAAPRHNQEEKDHGTASSPL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 14 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 18 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 19 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 20 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 21 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 22 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 23 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 24 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 25 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 26 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 29 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 30 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 31 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 32 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 42 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 71 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 72 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 73 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 74 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 75 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 76 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 77 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 78 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 111 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 112 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 113 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 114 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 115 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 116 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 117 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 118 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 119 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 128 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.35 |
| Metatranscriptomes | 0.65 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.65 |
| Nodule | 0 |
| Rhizoplane | 9.8 |
| Rhizosphere | 89.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24746J21847_1000763 | 3300001977 | Bacteria | 4944 |
| 2 | Ga0070683_100006328 | 3300005329 | Bacteria | 9932 |
| 3 | Ga0070683_100024322 | 3300005329 | Bacteria | 5424 |
| 4 | Ga0070677_10000036 | 3300005333 | Bacteria | 40479 |
| 5 | Ga0070682_100000077 | 3300005337 | Bacteria | 89055 |
| 6 | Ga0070682_100002529 | 3300005337 | Bacteria | 10092 |
| 7 | Ga0070674_100000063 | 3300005356 | Bacteria | 47714 |
| 8 | Ga0070673_100004843 | 3300005364 | Bacteria | 8564 |
| 9 | Ga0070688_100000022 | 3300005365 | Bacteria | 71190 |
| 10 | Ga0070688_100000209 | 3300005365 | Bacteria | 30882 |
| 11 | Ga0070713_100135695 | 3300005436 | Bacteria | 2174 |
| 12 | Ga0070681_10095711 | 3300005458 | Bacteria | 2918 |
| 13 | Ga0070685_10000037 | 3300005466 | Bacteria | 80557 |
| 14 | Ga0070685_10000047 | 3300005466 | Bacteria | 72690 |
| 15 | Ga0070679_100000069 | 3300005530 | Bacteria | 76557 |
| 16 | Ga0070684_100044250 | 3300005535 | Bacteria | 3850 |
| 17 | Ga0070684_100116127 | 3300005535 | Bacteria | 2404 |
| 18 | Ga0068853_100001854 | 3300005539 | Bacteria | 15528 |
| 19 | Ga0068853_100382133 | 3300005539 | Bacteria | 1315 |
| 20 | Ga0070672_100000058 | 3300005543 | Bacteria | 49964 |
| 21 | Ga0070665_100000068 | 3300005548 | Bacteria | 204531 |
| 22 | Ga0070665_100036653 | 3300005548 | Bacteria | 4931 |
| 23 | Ga0070704_100107501 | 3300005549 | Bacteria | 2116 |
| 24 | Ga0068854_100000273 | 3300005578 | Bacteria | 34810 |
| 25 | Ga0068854_100006353 | 3300005578 | Bacteria | 7514 |
| 26 | Ga0068856_100042376 | 3300005614 | Bacteria | 4477 |
| 27 | Ga0068852_100000005 | 3300005616 | Bacteria | 173127 |
| 28 | Ga0068864_100000024 | 3300005618 | Bacteria | 252632 |
| 29 | Ga0068866_10000011 | 3300005718 | Bacteria | 97191 |
| 30 | Ga0068851_10002999 | 3300005834 | Bacteria | 7457 |
| 31 | Ga0068863_100000004 | 3300005841 | Bacteria | 272478 |
| 32 | Ga0068858_100000012 | 3300005842 | Bacteria | 216931 |
| 33 | Ga0068860_100003122 | 3300005843 | Bacteria | 17119 |
| 34 | Ga0070715_10000011 | 3300006163 | Bacteria | 183857 |
| 35 | Ga0070716_100091545 | 3300006173 | Bacteria | 1842 |
| 36 | Ga0070712_100017513 | 3300006175 | Bacteria | 4640 |
| 37 | Ga0075428_100397677 | 3300006844 | Bacteria | 1477 |
| 38 | Ga0075431_100281129 | 3300006847 | Bacteria | 1685 |
| 39 | Ga0068865_100000062 | 3300006881 | Bacteria | 57186 |
| 40 | Ga0105245_10000147 | 3300009098 | Bacteria | 66496 |
| 41 | Ga0105245_10006036 | 3300009098 | Bacteria | 10649 |
| 42 | Ga0105243_10009494 | 3300009148 | Bacteria | 7405 |
| 43 | Ga0105238_10000023 | 3300009551 | Bacteria | 196844 |
| 44 | Ga0105239_10186817 | 3300010375 | Bacteria | 2319 |
| 45 | Ga0157369_10000130 | 3300013105 | Bacteria | 108193 |
| 46 | Ga0157374_10004135 | 3300013296 | Bacteria | 12188 |
| 47 | Ga0157374_10089720 | 3300013296 | Bacteria | 2929 |
| 48 | Ga0157375_10008980 | 3300013308 | Bacteria | 8747 |
| 49 | Ga0157380_10009946 | 3300014326 | Bacteria | 6825 |
| 50 | Ga0163161_10000018 | 3300017792 | Bacteria | 228801 |
| 51 | Ga0206353_11478425 | 3300020082 | Bacteria | 2678 |
| 52 | Ga0207656_10000114 | 3300025321 | Bacteria | 30841 |
| 53 | Ga0207642_10000010 | 3300025899 | Bacteria | 99207 |
| 54 | Ga0207685_10000001 | 3300025905 | Bacteria | 604473 |
| 55 | Ga0207654_10045496 | 3300025911 | Bacteria | 2498 |
| 56 | Ga0207707_10087080 | 3300025912 | Bacteria | 2729 |
| 57 | Ga0207693_10007532 | 3300025915 | Bacteria | 8943 |
| 58 | Ga0207663_10011254 | 3300025916 | Bacteria | 4799 |
| 59 | Ga0207652_10000142 | 3300025921 | Bacteria | 76696 |
| 60 | Ga0207694_10000004 | 3300025924 | Bacteria | 967075 |
| 61 | Ga0207687_10000026 | 3300025927 | Bacteria | 173968 |
| 62 | Ga0207687_10001320 | 3300025927 | Bacteria | 16975 |
| 63 | Ga0207687_10003353 | 3300025927 | Bacteria | 10825 |
| 64 | Ga0207700_10127437 | 3300025928 | Bacteria | 2073 |
| 65 | Ga0207664_10038941 | 3300025929 | Bacteria | 3688 |
| 66 | Ga0207669_10000025 | 3300025937 | Bacteria | 93633 |
| 67 | Ga0207704_10000045 | 3300025938 | Bacteria | 86589 |
| 68 | Ga0207691_10000284 | 3300025940 | Bacteria | 49983 |
| 69 | Ga0207661_10007038 | 3300025944 | Bacteria | 7982 |
| 70 | Ga0207661_10012966 | 3300025944 | Bacteria | 6081 |
| 71 | Ga0207661_10019004 | 3300025944 | Bacteria | 5114 |
| 72 | Ga0207651_10000301 | 3300025960 | Bacteria | 21265 |
| 73 | Ga0207712_10000037 | 3300025961 | Bacteria | 195906 |
| 74 | Ga0207668_10183664 | 3300025972 | Unclassified | 1652 |
| 75 | Ga0207640_10000128 | 3300025981 | Bacteria | 57474 |
| 76 | Ga0207640_10004143 | 3300025981 | Bacteria | 7834 |
| 77 | Ga0207703_10000550 | 3300026035 | Bacteria | 38556 |
| 78 | Ga0207639_10001677 | 3300026041 | Bacteria | 14952 |
| 79 | Ga0207639_10347461 | 3300026041 | Bacteria | 1324 |
| 80 | Ga0207702_10005801 | 3300026078 | Bacteria | 10739 |
| 81 | Ga0207702_10092105 | 3300026078 | Bacteria | 2656 |
| 82 | Ga0207641_10000129 | 3300026088 | Bacteria | 110871 |
| 83 | Ga0207676_10000065 | 3300026095 | Bacteria | 105757 |
| 84 | Ga0207698_10000038 | 3300026142 | Bacteria | 101918 |
| 85 | Ga0268266_10000020 | 3300028379 | Bacteria | 527065 |
| 86 | Ga0268264_10010778 | 3300028381 | Bacteria | 7552 |
| 87 | Ga0265319_1000762 | 3300028563 | Bacteria | 20918 |
| 88 | Ga0265338_10002514 | 3300028800 | Bacteria | 27252 |
| 89 | Ga0265325_10021029 | 3300031241 | Bacteria | 3591 |
| 90 | Ga0373937_0066358 | 3300036401 | Bacteria | 3323 |
| 91 | Ga0466963_0000139 | 3300044694 | Bacteria | 28196 |
| 92 | Ga0466971_0005886 | 3300044719 | Bacteria | 5336 |
| 93 | Ga0466957_0001280 | 3300044842 | Bacteria | 13105 |
| 94 | Ga0466958_0000711 | 3300045836 | Bacteria | 14535 |
| 95 | Ga0495592_0000428 | 3300046454 | Bacteria | 31801 |
| 96 | Ga0495629_0072955 | 3300046459 | Bacteria | 2397 |
| 97 | Ga0495641_0000020 | 3300046461 | Bacteria | 115404 |
| 98 | Ga0495651_0064169 | 3300046462 | Bacteria | 2807 |
| 99 | Ga0495662_0000250 | 3300046476 | Bacteria | 22726 |
| 100 | Ga0495594_0108425 | 3300046499 | Bacteria | 1565 |
| 101 | Ga0495608_0001459 | 3300046511 | Bacteria | 16807 |
| 102 | Ga0495608_0042608 | 3300046511 | Unclassified | 3036 |
| 103 | Ga0495620_0000582 | 3300046515 | Bacteria | 22851 |
| 104 | Ga0495628_0007921 | 3300046516 | Bacteria | 9153 |
| 105 | Ga0495630_0094872 | 3300046517 | Bacteria | 2255 |
| 106 | Ga0495644_0001940 | 3300046523 | Bacteria | 8307 |
| 107 | Ga0495652_0002229 | 3300046529 | Bacteria | 20315 |
| 108 | Ga0495640_0049802 | 3300046533 | Bacteria | 2887 |
| 109 | Ga0495586_0018155 | 3300046535 | Bacteria | 3742 |
| 110 | Ga0495598_0014254 | 3300046537 | Bacteria | 1985 |
| 111 | Ga0495625_0000029 | 3300046660 | Bacteria | 244646 |
| 112 | Ga0495588_0000250 | 3300046674 | Bacteria | 45010 |
| 113 | Ga0495599_0059273 | 3300046678 | Bacteria | 2394 |
| 114 | Ga0495647_0000015 | 3300046681 | Bacteria | 86790 |
| 115 | Ga0495647_0000574 | 3300046681 | Bacteria | 10847 |
| 116 | Ga0495658_0000009 | 3300046683 | Bacteria | 110421 |
| 117 | Ga0495669_0000103 | 3300046684 | Bacteria | 53749 |
| 118 | Ga0495624_0000012 | 3300046690 | Bacteria | 124128 |
| 119 | Ga0495624_0004399 | 3300046690 | Bacteria | 10309 |
| 120 | Ga0495649_0002521 | 3300046694 | Bacteria | 12845 |
| 121 | Ga0495600_0000884 | 3300046809 | Bacteria | 16029 |
| 122 | Ga0495581_0143986 | 3300047315 | Bacteria | 1391 |
| 123 | Ga0495676_0074838 | 3300047321 | Bacteria | 2592 |
| 124 | Ga0495680_0000952 | 3300047322 | Bacteria | 32176 |
| 125 | Ga0495679_042438 | 3300047446 | Bacteria | 1403 |
| 126 | Ga0495685_008795 | 3300047447 | Bacteria | 3363 |
| 127 | Ga0495684_0137169 | 3300047471 | Bacteria | 1836 |
| 128 | Ga0496100_0000007 | 3300048903 | Bacteria | 261266 |
| 129 | Ga0496101_0000013 | 3300048904 | Bacteria | 261266 |
| 130 | Ga0496104_0000013 | 3300048907 | Bacteria | 397163 |
| 131 | Ga0496105_0000006 | 3300048908 | Bacteria | 393578 |
| 132 | Ga0496106_0000006 | 3300048909 | Bacteria | 251855 |
| 133 | Ga0496106_0000049 | 3300048909 | Bacteria | 97550 |
| 134 | Ga0496107_0000007 | 3300048910 | Bacteria | 257113 |
| 135 | Ga0496108_0000080 | 3300048911 | Bacteria | 102267 |
| 136 | Ga0496109_0000006 | 3300048912 | Bacteria | 325513 |
| 137 | Ga0496109_0000024 | 3300048912 | Bacteria | 174723 |
| 138 | Ga0496110_0001068 | 3300048913 | Bacteria | 19349 |
| 139 | Ga0496110_0102137 | 3300048913 | Bacteria | 2571 |
| 140 | Ga0496111_0000210 | 3300048914 | Bacteria | 27543 |
| 141 | Ga0496113_0003626 | 3300048916 | Bacteria | 9279 |
| 142 | Ga0496113_0315233 | 3300048916 | Bacteria | 1253 |
| 143 | Ga0501039_0017222 | 3300049575 | Bacteria | 5543 |
| 144 | Ga0501075_0003448 | 3300049591 | Bacteria | 10575 |
| 145 | Ga0501076_0212459 | 3300049592 | Bacteria | 1581 |
| 146 | Ga0495601_0001553 | 3300053077 | Bacteria | 12686 |
| 147 | Ga0495601_0069415 | 3300053077 | Bacteria | 2248 |
| 148 | Ga0495612_0000859 | 3300053078 | Bacteria | 12359 |
| 149 | Ga0495655_0000772 | 3300053083 | Bacteria | 5026 |
| 150 | Ga0495595_0000099 | 3300053084 | Bacteria | 39785 |
| 151 | Ga0495619_0000028 | 3300053085 | Bacteria | 162196 |
| 152 | Ga0500614_000823 | 3300053123 | Bacteria | 7827 |
| 153 | Ga0466962_0030066 | 3300061719 | Bacteria | 2601 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025929 | Ga0207664_10038941 | Ga0207664_100389411 | 290 |
| 2 | 3300006163 | Ga0070715_10000011 | Ga0070715_10000011116 | 298 |
| 3 | 3300025905 | Ga0207685_10000001 | Ga0207685_1000000171 | 298 |
| 4 | 3300025911 | Ga0207654_10045496 | Ga0207654_100454962 | 299 |
| 5 | 3300005618 | Ga0068864_100000024 | Ga0068864_10000002456 | 301 |
| 6 | 3300025927 | Ga0207687_10001320 | Ga0207687_100013209 | 301 |
| 7 | 3300026095 | Ga0207676_10000065 | Ga0207676_1000006547 | 301 |
| 8 | 3300005356 | Ga0070674_100000063 | Ga0070674_10000006336 | 310 |
| 9 | 3300005616 | Ga0068852_100000005 | Ga0068852_100000005116 | 310 |
| 10 | 3300005718 | Ga0068866_10000011 | Ga0068866_1000001137 | 310 |
| 11 | 3300025899 | Ga0207642_10000010 | Ga0207642_1000001058 | 310 |
| 12 | 3300025937 | Ga0207669_10000025 | Ga0207669_1000002526 | 310 |
| 13 | 3300026142 | Ga0207698_10000038 | Ga0207698_1000003837 | 310 |
| 14 | 3300017792 | Ga0163161_10000018 | Ga0163161_1000001855 | 311 |
| 15 | 3300046459 | Ga0495629_0072955 | Ga0495629_0072955_1250_2185 | 311 |
| 16 | 3300046529 | Ga0495652_0002229 | Ga0495652_0002229_6313_7248 | 311 |
| 17 | 3300048911 | Ga0496108_0000080 | Ga0496108_0000080_57933_58973 | 314 |
| 18 | 3300048912 | Ga0496109_0000024 | Ga0496109_0000024_57933_58973 | 314 |
| 19 | 3300005578 | Ga0068854_100000273 | Ga0068854_10000027334 | 316 |
| 20 | 3300025981 | Ga0207640_10000128 | Ga0207640_1000012827 | 316 |
| 21 | 3300005548 | Ga0070665_100036653 | Ga0070665_1000366532 | 317 |
| 22 | 3300046511 | Ga0495608_0042608 | Ga0495608_0042608_1441_2445 | 318 |
| 23 | 3300026078 | Ga0207702_10092105 | Ga0207702_100921053 | 319 |
| 24 | 3300048916 | Ga0496113_0315233 | Ga0496113_0315233_81_1115 | 323 |
| 25 | 3300005548 | Ga0070665_100000068 | Ga0070665_10000006854 | 326 |
| 26 | 3300005842 | Ga0068858_100000012 | Ga0068858_100000012193 | 326 |
| 27 | 3300026035 | Ga0207703_10000550 | Ga0207703_1000055025 | 326 |
| 28 | 3300028379 | Ga0268266_10000020 | Ga0268266_10000020348 | 326 |
| 29 | 3300009098 | Ga0105245_10006036 | Ga0105245_100060365 | 327 |
| 30 | 3300046537 | Ga0495598_0014254 | Ga0495598_0014254_878_1861 | 327 |
| 31 | 3300005329 | Ga0070683_100024322 | Ga0070683_1000243227 | 328 |
| 32 | 3300005841 | Ga0068863_100000004 | Ga0068863_10000000424 | 328 |
| 33 | 3300025944 | Ga0207661_10019004 | Ga0207661_100190043 | 328 |
| 34 | 3300026088 | Ga0207641_10000129 | Ga0207641_1000012922 | 328 |
| 35 | 3300046461 | Ga0495641_0000020 | Ga0495641_0000020_63399_64430 | 328 |
| 36 | 3300046517 | Ga0495630_0094872 | Ga0495630_0094872_294_1325 | 328 |
| 37 | 3300053123 | Ga0500614_000823 | Ga0500614_000823_5781_6812 | 328 |
| 38 | 3300009098 | Ga0105245_10000147 | Ga0105245_1000014723 | 329 |
| 39 | 3300025927 | Ga0207687_10000026 | Ga0207687_10000026161 | 329 |
| 40 | 3300046499 | Ga0495594_0108425 | Ga0495594_0108425_206_1195 | 329 |
| 41 | 3300048913 | Ga0496110_0102137 | Ga0496110_0102137_424_1458 | 329 |
| 42 | 3300046515 | Ga0495620_0000582 | Ga0495620_0000582_16198_17232 | 330 |
| 43 | 3300048903 | Ga0496100_0000007 | Ga0496100_0000007_168982_170040 | 330 |
| 44 | 3300048904 | Ga0496101_0000013 | Ga0496101_0000013_168982_170040 | 330 |
| 45 | 3300048909 | Ga0496106_0000006 | Ga0496106_0000006_163121_164179 | 330 |
| 46 | 3300048910 | Ga0496107_0000007 | Ga0496107_0000007_163123_164181 | 330 |
| 47 | 3300005578 | Ga0068854_100006353 | Ga0068854_1000063536 | 331 |
| 48 | 3300025981 | Ga0207640_10004143 | Ga0207640_100041436 | 331 |
| 49 | 3300046684 | Ga0495669_0000103 | Ga0495669_0000103_8729_9787 | 331 |
| 50 | 3300049575 | Ga0501039_0017222 | Ga0501039_0017222_838_1875 | 331 |
| 51 | 3300049592 | Ga0501076_0212459 | Ga0501076_0212459_358_1395 | 331 |
| 52 | 3300053078 | Ga0495612_0000859 | Ga0495612_0000859_1748_2782 | 331 |
| 53 | 3300044694 | Ga0466963_0000139 | Ga0466963_0000139_3686_4738 | 332 |
| 54 | 3300046694 | Ga0495649_0002521 | Ga0495649_0002521_3129_4163 | 333 |
| 55 | 3300046674 | Ga0495588_0000250 | Ga0495588_0000250_14001_15029 | 334 |
| 56 | 3300005834 | Ga0068851_10002999 | Ga0068851_100029996 | 335 |
| 57 | 3300025321 | Ga0207656_10000114 | Ga0207656_1000011436 | 335 |
| 58 | 3300053077 | Ga0495601_0069415 | Ga0495601_0069415_680_1711 | 335 |
| 59 | 3300049591 | Ga0501075_0003448 | Ga0501075_0003448_4410_5426 | 338 |
| 60 | 3300005364 | Ga0070673_100004843 | Ga0070673_1000048436 | 339 |
| 61 | 3300005843 | Ga0068860_100003122 | Ga0068860_1000031226 | 339 |
| 62 | 3300025960 | Ga0207651_10000301 | Ga0207651_100003016 | 339 |
| 63 | 3300028381 | Ga0268264_10010778 | Ga0268264_100107783 | 339 |
| 64 | 3300046533 | Ga0495640_0049802 | Ga0495640_0049802_996_2015 | 339 |
| 65 | 3300047447 | Ga0495685_008795 | Ga0495685_008795_1558_2577 | 339 |
| 66 | 3300046454 | Ga0495592_0000428 | Ga0495592_0000428_2247_3269 | 340 |
| 67 | 3300046516 | Ga0495628_0007921 | Ga0495628_0007921_5015_6037 | 340 |
| 68 | 3300046690 | Ga0495624_0004399 | Ga0495624_0004399_481_1503 | 340 |
| 69 | 3300046809 | Ga0495600_0000884 | Ga0495600_0000884_5423_6445 | 340 |
| 70 | 3300005337 | Ga0070682_100002529 | Ga0070682_1000025293 | 341 |
| 71 | 3300005436 | Ga0070713_100135695 | Ga0070713_1001356953 | 341 |
| 72 | 3300010375 | Ga0105239_10186817 | Ga0105239_101868172 | 341 |
| 73 | 3300020082 | Ga0206353_11478425 | Ga0206353_114784253 | 341 |
| 74 | 3300025916 | Ga0207663_10011254 | Ga0207663_100112543 | 341 |
| 75 | 3300025927 | Ga0207687_10003353 | Ga0207687_100033536 | 341 |
| 76 | 3300025928 | Ga0207700_10127437 | Ga0207700_101274372 | 341 |
| 77 | 3300046511 | Ga0495608_0001459 | Ga0495608_0001459_3383_4408 | 341 |
| 78 | 3300048913 | Ga0496110_0001068 | Ga0496110_0001068_1929_2954 | 341 |
| 79 | 3300048914 | Ga0496111_0000210 | Ga0496111_0000210_3866_4891 | 341 |
| 80 | 3300053085 | Ga0495619_0000028 | Ga0495619_0000028_8974_9999 | 341 |
| 81 | 3300005365 | Ga0070688_100000022 | Ga0070688_10000002244 | 342 |
| 82 | 3300005365 | Ga0070688_100000209 | Ga0070688_10000020932 | 342 |
| 83 | 3300005466 | Ga0070685_10000037 | Ga0070685_1000003747 | 342 |
| 84 | 3300005466 | Ga0070685_10000047 | Ga0070685_1000004730 | 342 |
| 85 | 3300005543 | Ga0070672_100000058 | Ga0070672_10000005830 | 342 |
| 86 | 3300006844 | Ga0075428_100397677 | Ga0075428_1003976771 | 342 |
| 87 | 3300006847 | Ga0075431_100281129 | Ga0075431_1002811292 | 342 |
| 88 | 3300006881 | Ga0068865_100000062 | Ga0068865_10000006231 | 342 |
| 89 | 3300013105 | Ga0157369_10000130 | Ga0157369_1000013033 | 342 |
| 90 | 3300013308 | Ga0157375_10008980 | Ga0157375_100089807 | 342 |
| 91 | 3300025938 | Ga0207704_10000045 | Ga0207704_1000004551 | 342 |
| 92 | 3300025940 | Ga0207691_10000284 | Ga0207691_1000028430 | 342 |
| 93 | 3300046523 | Ga0495644_0001940 | Ga0495644_0001940_6487_7515 | 342 |
| 94 | 3300046690 | Ga0495624_0000012 | Ga0495624_0000012_65110_66168 | 342 |
| 95 | 3300053083 | Ga0495655_0000772 | Ga0495655_0000772_1465_2493 | 342 |
| 96 | 3300005549 | Ga0070704_100107501 | Ga0070704_1001075012 | 343 |
| 97 | 3300006173 | Ga0070716_100091545 | Ga0070716_1000915452 | 343 |
| 98 | 3300009148 | Ga0105243_10009494 | Ga0105243_100094946 | 343 |
| 99 | 3300013296 | Ga0157374_10004135 | Ga0157374_100041357 | 343 |
| 100 | 3300013296 | Ga0157374_10089720 | Ga0157374_100897203 | 343 |
| 101 | 3300014326 | Ga0157380_10009946 | Ga0157380_100099464 | 343 |
| 102 | 3300025972 | Ga0207668_10183664 | Ga0207668_101836642 | 343 |
| 103 | 3300028563 | Ga0265319_1000762 | Ga0265319_100076215 | 343 |
| 104 | 3300028800 | Ga0265338_10002514 | Ga0265338_100025146 | 343 |
| 105 | 3300031241 | Ga0265325_10021029 | Ga0265325_100210293 | 343 |
| 106 | 3300046535 | Ga0495586_0018155 | Ga0495586_0018155_504_1547 | 343 |
| 107 | 3300046660 | Ga0495625_0000029 | Ga0495625_0000029_171579_172610 | 343 |
| 108 | 3300047321 | Ga0495676_0074838 | Ga0495676_0074838_1446_2477 | 343 |
| 109 | 3300048909 | Ga0496106_0000049 | Ga0496106_0000049_76931_77962 | 343 |
| 110 | 3300048916 | Ga0496113_0003626 | Ga0496113_0003626_3267_4298 | 343 |
| 111 | 3300005333 | Ga0070677_10000036 | Ga0070677_100000367 | 344 |
| 112 | 3300005337 | Ga0070682_100000077 | Ga0070682_10000007788 | 344 |
| 113 | 3300005539 | Ga0068853_100001854 | Ga0068853_1000018546 | 344 |
| 114 | 3300005539 | Ga0068853_100382133 | Ga0068853_1003821331 | 344 |
| 115 | 3300005614 | Ga0068856_100042376 | Ga0068856_1000423765 | 344 |
| 116 | 3300009551 | Ga0105238_10000023 | Ga0105238_10000023182 | 344 |
| 117 | 3300025924 | Ga0207694_10000004 | Ga0207694_10000004870 | 344 |
| 118 | 3300025961 | Ga0207712_10000037 | Ga0207712_1000003791 | 344 |
| 119 | 3300026041 | Ga0207639_10001677 | Ga0207639_100016777 | 344 |
| 120 | 3300026041 | Ga0207639_10347461 | Ga0207639_103474612 | 344 |
| 121 | 3300026078 | Ga0207702_10005801 | Ga0207702_100058018 | 344 |
| 122 | 3300036401 | Ga0373937_0066358 | Ga0373937_0066358_555_1589 | 344 |
| 123 | 3300046462 | Ga0495651_0064169 | Ga0495651_0064169_565_1599 | 344 |
| 124 | 3300046476 | Ga0495662_0000250 | Ga0495662_0000250_6014_7048 | 344 |
| 125 | 3300046678 | Ga0495599_0059273 | Ga0495599_0059273_556_1590 | 344 |
| 126 | 3300046681 | Ga0495647_0000015 | Ga0495647_0000015_4273_5307 | 344 |
| 127 | 3300046683 | Ga0495658_0000009 | Ga0495658_0000009_36352_37386 | 344 |
| 128 | 3300047315 | Ga0495581_0143986 | Ga0495581_0143986_215_1249 | 344 |
| 129 | 3300047322 | Ga0495680_0000952 | Ga0495680_0000952_2659_3693 | 344 |
| 130 | 3300047446 | Ga0495679_042438 | Ga0495679_042438_173_1207 | 344 |
| 131 | 3300047471 | Ga0495684_0137169 | Ga0495684_0137169_339_1373 | 344 |
| 132 | 3300048907 | Ga0496104_0000013 | Ga0496104_0000013_130048_131082 | 344 |
| 133 | 3300048908 | Ga0496105_0000006 | Ga0496105_0000006_266082_267116 | 344 |
| 134 | 3300048912 | Ga0496109_0000006 | Ga0496109_0000006_183384_184427 | 344 |
| 135 | 3300053077 | Ga0495601_0001553 | Ga0495601_0001553_921_1955 | 344 |
| 136 | 3300053084 | Ga0495595_0000099 | Ga0495595_0000099_3730_4767 | 345 |
| 137 | 3300005329 | Ga0070683_100006328 | Ga0070683_1000063287 | 346 |
| 138 | 3300005535 | Ga0070684_100044250 | Ga0070684_1000442505 | 346 |
| 139 | 3300025944 | Ga0207661_10007038 | Ga0207661_100070387 | 346 |
| 140 | 3300005535 | Ga0070684_100116127 | Ga0070684_1001161272 | 347 |
| 141 | 3300006175 | Ga0070712_100017513 | Ga0070712_1000175134 | 347 |
| 142 | 3300025915 | Ga0207693_10007532 | Ga0207693_100075323 | 347 |
| 143 | 3300025944 | Ga0207661_10012966 | Ga0207661_100129663 | 347 |
| 144 | 3300046681 | Ga0495647_0000574 | Ga0495647_0000574_8829_9884 | 347 |
| 145 | 3300005458 | Ga0070681_10095711 | Ga0070681_100957114 | 348 |
| 146 | 3300005530 | Ga0070679_100000069 | Ga0070679_10000006949 | 348 |
| 147 | 3300025912 | Ga0207707_10087080 | Ga0207707_100870803 | 348 |
| 148 | 3300025921 | Ga0207652_10000142 | Ga0207652_1000014234 | 348 |
| 149 | 3300044719 | Ga0466971_0005886 | Ga0466971_0005886_1368_2435 | 348 |
| 150 | 3300044842 | Ga0466957_0001280 | Ga0466957_0001280_6652_7719 | 348 |
| 151 | 3300045836 | Ga0466958_0000711 | Ga0466958_0000711_12302_13369 | 348 |
| 152 | 3300061719 | Ga0466962_0030066 | Ga0466962_0030066_1187_2254 | 348 |
| 153 | 3300001977 | JGI24746J21847_1000763 | JGI24746J21847_10007634 | 349 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2fa5-assembly1.cif.gz_A | the crystal structure of an unliganded multiple antibiotic-resistance repressor (marr) from xanthomonas campestris | 0.8989 | 196 | 250 |
| 2fa5-assembly1.cif.gz_B | the crystal structure of an unliganded multiple antibiotic-resistance repressor (marr) from xanthomonas campestris | 0.8677 | 196 | 250 |
| 2xro-assembly1.cif.gz_E | crystal structure of ttgv in complex with its dna operator | 0.8251 | 195 | 248 |
| 4kmf-assembly1.cif.gz_A-2 | crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna | 0.8222 | 192 | 248 |
| 3f22-assembly2.cif.gz_C | crystal structure of zalpha in complex with d(cgtacg) | 0.8082 | 192 | 248 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A368UHH6_2_74_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.872 | 197 | 236 | 1.10.10.10 |
| af_P77569_1_73_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8683 | 189 | 248 | 1.10.10.10 |
| 4ijaB01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8526 | 198 | 249 | 1.10.10.10 |
| 1z05A01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8521 | 194 | 250 | 1.10.10.10 |
| 4ijaA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8435 | 198 | 249 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V8XMX5-F1-model_v4 | Winged helix DNA-binding domain-containing protein | 0.985 | 8 | 245 |
GO:0003677
|
| AF-A0A7V9JQY0-F1-model_v4 | Winged helix DNA-binding domain-containing protein | 0.9844 | 8 | 205 |
GO:0003677
|
| AF-A0A538EQ35-F1-model_v4 | Winged helix DNA-binding domain-containing protein | 0.9779 | 1 | 343 |
GO:0003677
|
| AF-A0A2W6BH40-F1-model_v4 | Winged helix DNA-binding domain-containing protein | 0.9776 | 4 | 342 |
|
| AF-A0A538EQ35-F1-model_v4 | Winged helix DNA-binding domain-containing protein | 0.975 | 1 | 343 |
GO:0003677
|
Predicted Structure (AlphaFold2)
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