F215388

General Info

Members Datasets Scaffolds Average Seq Length
152 124 84 247

Family's Representative Sequence

Representative Sequence 3300048919|Ga0496116_0059961|Ga0496116_0059961_709_1578
Length 289
Sequence MGVAGVNIQDCSWPCAAVYFPKKMDNVGGLMNNVKLSNRLQLVLEQIPTGSKLADIGSDHALLPVAALRSGKAVSAIAGEVNPGPYEAARRGVAEAGLGKQIEVRRGDGLEVLEPGEADSISIAGMGGALIAAILDRGKSLGKLAGVKLLALQPNVGEDILRRWLLNNHWVLTAEHILEEDGKIYEILTAVPEGEAAGITNEQLYHEQQLAGGNLVCSKELLLQMGPWLLQAPNAVFTAKWQSEIAKLEGILASLSRSELESAEEKRSRITAQITTISEVLKCTPKDKL

Samples

Sample ID Description Type Environment
1 2511231011 Pseudomonas sp. GM30 Isolate Nodule
2 2511231018 Pseudomonas sp. GM60 Isolate Nodule
3 2511231019 Pseudomonas sp. GM67 Isolate Nodule
4 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
5 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
6 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
7 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
8 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
9 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
10 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
11 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
12 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
13 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
14 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
15 2738541295 Bacillus sp. OK085 Isolate Unclassified
16 2738543017 Bacillus sp. OV186 Isolate Unclassified
17 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
18 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
19 2773857673 Pseudomonas sp. 443 Isolate Unclassified
20 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
21 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
22 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
23 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
24 2818991459 Paenibacillus sp. 597 Isolate Unclassified
25 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
26 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
27 2857586860 Bacillus sp. R-71935 Isolate Unclassified
28 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
29 2880230671 Pseudomonas fluorescens LBUM677 Isolate Unclassified
30 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
31 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
32 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
33 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
34 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
35 2904518522 Pseudomonas fluorescens 4488 Isolate Rhizosphere
36 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
37 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
38 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
39 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
40 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
41 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
42 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
43 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
44 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
45 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
46 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
47 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
48 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
49 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
50 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
51 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
52 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
53 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
54 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
55 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
56 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
57 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
58 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
59 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
60 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
61 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
62 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
63 3007718800 Pseudomonas fluorescens BW11P2 Isolate Rhizosphere
64 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
65 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
66 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
67 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
68 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
69 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
70 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
74 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
75 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
76 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
80 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
89 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
90 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
91 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
92 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
93 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
94 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
95 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
96 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
97 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
98 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
99 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
102 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
103 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
104 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
115 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
116 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
120 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
121 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
122 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
123 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
124 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 55.26
Metatranscriptomes 0
Isolates 44.74

Biome Distribution

Category Percentage (%)
Aerial Root 1.32
Bulb 0
Endosphere 13.16
Nodule 2.63
Rhizoplane 3.95
Rhizosphere 44.08
Stem 0
Stem Tuber 0
Unclassified 34.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10001774 3300003187 Bacteria 13962
2 JGI25151J46595_10015828 3300003187 Bacteria 3311
3 JGI25151J46595_10047297 3300003187 Bacteria 1498
4 Ga0055538_1000091 3300003751 Bacteria 77577
5 Ga0055532_1000046 3300003758 Bacteria 182389
6 Ga0055536_1028746 3300003781 Bacteria 1509
7 Ga0055541_1000095 3300003841 Bacteria 74451
8 Ga0065714_10008607 3300005288 Bacteria 2579
9 Ga0105244_10004134 3300009036 Bacteria 10108
10 Ga0105246_10010207 3300011119 Bacteria 5800
11 Ga0157371_10001434 3300013102 Bacteria 24764
12 Ga0182008_10077262 3300014497 Bacteria 1638
13 Ga0182007_10031806 3300015262 Bacteria 1795
14 Ga0182005_1021094 3300015265 Bacteria 1789
15 Ga0209784_100135 3300025224 Bacteria 70506
16 Ga0209566_100058 3300025225 Bacteria 201317
17 Ga0209566_100248 3300025225 Bacteria 51716
18 Ga0209147_100014 3300025229 Bacteria 597841
19 Ga0209437_100771 3300025233 Bacteria 15225
20 Ga0209258_100797 3300025242 Bacteria 18622
21 Ga0209130_1031040 3300025284 Bacteria 1099
22 Ga0209676_1000911 3300025292 Bacteria 36940
23 Ga0209025_1000041 3300025294 Bacteria 373694
24 Ga0209025_1001579 3300025294 Bacteria 28809
25 Ga0209025_1005375 3300025294 Bacteria 10484
26 Ga0209025_1047438 3300025294 Bacteria 1754
27 Ga0209025_1047440 3300025294 Bacteria 1754
28 Ga0207655_1025524 3300025728 Bacteria 2865
29 Ga0307511_10101708 3300030521 Bacteria 1882
30 Ga0307409_100143148 3300031995 Bacteria 2063
31 Ga0307409_100329337 3300031995 Bacteria 1433
32 Ga0307416_100008536 3300032002 Bacteria 6621
33 Ga0439463_000083 3300042016 Bacteria 22099
34 Ga0495627_000087 3300046453 Bacteria 110870
35 Ga0495605_0000516 3300046474 Bacteria 32935
36 Ga0495605_0003572 3300046474 Bacteria 9213
37 Ga0495607_0031472 3300046501 Bacteria 3248
38 Ga0495607_0036058 3300046501 Bacteria 2985
39 Ga0495620_0070901 3300046515 Bacteria 1426
40 Ga0495631_0008991 3300046518 Bacteria 5006
41 Ga0495632_0077205 3300046519 Bacteria 1592
42 Ga0495637_0026543 3300046520 Bacteria 2598
43 Ga0495637_0130334 3300046520 Bacteria 961
44 Ga0495643_0075057 3300046522 Bacteria 1769
45 Ga0495654_0001403 3300046530 Bacteria 16697
46 Ga0495609_0000062 3300046538 Bacteria 138094
47 Ga0495661_0000001 3300046665 Bacteria 898372
48 Ga0495670_0161338 3300046691 Bacteria 1178
49 Ga0495660_0011994 3300046810 Bacteria 5027
50 Ga0495660_0056231 3300046810 Bacteria 2126
51 Ga0495672_0001424 3300047320 Bacteria 23506
52 Ga0495673_0012622 3300047469 Bacteria 4469
53 Ga0495681_0000023 3300047470 Bacteria 154266
54 Ga0495681_0000803 3300047470 Bacteria 24200
55 Ga0496101_0134783 3300048904 Bacteria 1878
56 Ga0496102_0032701 3300048905 Bacteria 4674
57 Ga0496110_0257414 3300048913 Bacteria 1589
58 Ga0496116_0006764 3300048919 Bacteria 10318
59 Ga0496116_0006815 3300048919 Bacteria 10272
60 Ga0496116_0046549 3300048919 Bacteria 2927
61 Ga0496116_0059961 3300048919 Bacteria 2471
62 Ga0496116_0060708 3300048919 Bacteria 2451
63 Ga0496117_0005237 3300048920 Bacteria 13763
64 Ga0496118_0038412 3300048921 Bacteria 3838
65 Ga0496118_0080111 3300048921 Bacteria 2300
66 Ga0496119_0013102 3300048922 Bacteria 6644
67 Ga0496120_0008726 3300048923 Bacteria 7296
68 Ga0496120_0010719 3300048923 Bacteria 6360
69 Ga0496121_0057103 3300048924 Bacteria 3237
70 Ga0496122_0005535 3300048925 Bacteria 14997
71 Ga0496122_0051472 3300048925 Bacteria 3128
72 Ga0496122_0277763 3300048925 Bacteria 918
73 Ga0496123_0001545 3300048926 Bacteria 31753
74 Ga0496123_0096206 3300048926 Bacteria 1739
75 Ga0496124_0002171 3300048927 Bacteria 26274
76 Ga0496124_0096377 3300048927 Bacteria 2403
77 Ga0496124_0191407 3300048927 Bacteria 1565
78 Ga0496125_0002304 3300048928 Bacteria 25187
79 Ga0496125_0007788 3300048928 Bacteria 11329
80 Ga0496125_0020646 3300048928 Bacteria 6177
81 Ga0496125_0136522 3300048928 Bacteria 1714
82 Ga0496125_0147213 3300048928 Bacteria 1625
83 Ga0496126_0004000 3300048929 Bacteria 17985
84 Ga0495678_006061 3300049459 Bacteria 6508

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2864733723 2864735331 178
2 3300046501 Ga0495607_0031472 Ga0495607_0031472_2529_3191 179
3 3300025224 Ga0209784_100135 Ga0209784_10013511 185
4 iso_pu_bacteria 2904518522 2904523459 186
5 3300003751 Ga0055538_1000091 Ga0055538_100009165 188
6 3300003841 Ga0055541_1000095 Ga0055541_100009538 188
7 3300025225 Ga0209566_100058 Ga0209566_10005887 188
8 3300025242 Ga0209258_100797 Ga0209258_10079715 188
9 iso_pu_bacteria 2907202186 2907205823 189
10 3300046453 Ga0495627_000087 Ga0495627_000087_87290_87964 190
11 3300046518 Ga0495631_0008991 Ga0495631_0008991_3866_4540 190
12 3300046519 Ga0495632_0077205 Ga0495632_0077205_98_772 190
13 3300046530 Ga0495654_0001403 Ga0495654_0001403_15960_16634 190
14 3300047320 Ga0495672_0001424 Ga0495672_0001424_6434_7108 190
15 3300048921 Ga0496118_0038412 Ga0496118_0038412_1665_2336 190
16 3300048928 Ga0496125_0007788 Ga0496125_0007788_7731_8405 190
17 iso_pu_bacteria 2511231011 2511296830 193
18 iso_pu_bacteria 2773857673 2774138359 193
19 iso_pu_bacteria 2880230671 2880233088 193
20 iso_pu_bacteria 2929189879 2929193477 193
21 iso_pu_bacteria 2931396565 2931401741 193
22 iso_pu_bacteria 3007718800 3007721893 193
23 3300005288 Ga0065714_10008607 Ga0065714_100086074 197
24 3300013102 Ga0157371_10001434 Ga0157371_100014349 197
25 3300014497 Ga0182008_10077262 Ga0182008_100772622 197
26 3300015262 Ga0182007_10031806 Ga0182007_100318062 197
27 3300015265 Ga0182005_1021094 Ga0182005_10210942 197
28 3300030521 Ga0307511_10101708 Ga0307511_101017082 197
29 3300042016 Ga0439463_000083 Ga0439463_000083_21202_21975 197
30 3300046474 Ga0495605_0000516 Ga0495605_0000516_13705_14496 197
31 3300046474 Ga0495605_0003572 Ga0495605_0003572_3048_3752 197
32 3300046501 Ga0495607_0036058 Ga0495607_0036058_644_1384 197
33 3300046515 Ga0495620_0070901 Ga0495620_0070901_49_900 197
34 3300046522 Ga0495643_0075057 Ga0495643_0075057_852_1703 197
35 3300046538 Ga0495609_0000062 Ga0495609_0000062_112728_113579 197
36 3300046665 Ga0495661_0000001 Ga0495661_0000001_39080_39931 197
37 3300046810 Ga0495660_0056231 Ga0495660_0056231_352_1203 197
38 3300047469 Ga0495673_0012622 Ga0495673_0012622_1440_2291 197
39 3300047470 Ga0495681_0000023 Ga0495681_0000023_95061_95798 197
40 3300047470 Ga0495681_0000803 Ga0495681_0000803_4768_5619 197
41 3300049459 Ga0495678_006061 Ga0495678_006061_866_1717 197
42 iso_pu_bacteria 2511231018 2511340635 197
43 iso_pu_bacteria 2511231019 2511343675 197
44 iso_pu_bacteria 2563366752 2563926946 197
45 iso_pu_bacteria 2599185257 2599802385 197
46 iso_pu_bacteria 2643221543 2643737976 197
47 iso_pu_bacteria 2821111986 2821114729 197
48 iso_pu_bacteria 2885526491 2885527914 197
49 iso_pu_bacteria 2889042446 2889046888 197
50 iso_pu_bacteria 2889276214 2889280930 197
51 iso_pu_bacteria 2904162308 2904163140 197
52 iso_pu_bacteria 2904490793 2904493792 197
53 iso_pu_bacteria 2904595352 2904598289 197
54 iso_pu_bacteria 2919160200 2919162872 197
55 iso_pu_bacteria 2931384279 2931390335 197
56 iso_pu_bacteria 2939679117 2939679646 197
57 iso_pu_bacteria 2945991243 2945997441 197
58 iso_pu_bacteria 2946053406 2946053652 197
59 iso_pu_bacteria 2984527788 2984530371 197
60 iso_pu_bacteria 2984532647 2984536479 197
61 iso_pu_bacteria 648028048 648171086 197
62 iso_pu_bacteria 2585428059 2587737772 198
63 iso_pu_bacteria 2643221676 2644423142 198
64 iso_pu_bacteria 2791355222 2793186056 198
65 iso_pu_bacteria 2818991459 2819670566 198
66 iso_pu_bacteria 2857453340 2857459327 198
67 iso_pu_bacteria 2904755435 2904760052 198
68 iso_pu_bacteria 2919425241 2919427118 198
69 iso_pu_bacteria 2925326138 2925330120 198
70 iso_pu_bacteria 2971410472 2971417331 198
71 iso_pu_bacteria 2980182181 2980184384 198
72 iso_pu_bacteria 8054795415 8054804789 198
73 iso_pu_bacteria 8056533031 8056540037 198
74 iso_pu_bacteria 8057733483 8057737582 199
75 3300025225 Ga0209566_100248 Ga0209566_10024837 200
76 iso_pu_bacteria 2571042143 2571530851 200
77 iso_pu_bacteria 2593339131 2595089480 200
78 iso_pu_bacteria 2600255286 2601639153 200
79 iso_pu_bacteria 2728368933 2728534195 200
80 iso_pu_bacteria 2738543017 2739270414 200
81 iso_pu_bacteria 2757320391 2757567941 200
82 iso_pu_bacteria 2775507177 2777761050 200
83 iso_pu_bacteria 2775507192 2777839840 200
84 iso_pu_bacteria 2857586860 2857590611 200
85 iso_pu_bacteria 2936340661 2936341218 200
86 iso_pu_bacteria 2938649242 2938650239 200
87 iso_pu_bacteria 2964375228 2964378255 200
88 iso_pu_bacteria 2968558590 2968564098 200
89 iso_pu_bacteria 2971403814 2971407292 200
90 iso_pu_bacteria 2971511577 2971512650 200
91 iso_pu_bacteria 2980176882 2980177639 200
92 iso_pu_bacteria 2996632988 2996636026 200
93 iso_pu_bacteria 8054465665 8054470253 200
94 3300009036 Ga0105244_10004134 Ga0105244_100041347 201
95 3300011119 Ga0105246_10010207 Ga0105246_100102073 201
96 3300025233 Ga0209437_100771 Ga0209437_1007719 201
97 3300025728 Ga0207655_1025524 Ga0207655_10255242 201
98 3300048919 Ga0496116_0006815 Ga0496116_0006815_7758_8516 201
99 3300048919 Ga0496116_0046549 Ga0496116_0046549_1808_2566 201
100 3300048925 Ga0496122_0277763 Ga0496122_0277763_31_789 201
101 3300048927 Ga0496124_0096377 Ga0496124_0096377_1167_1925 201
102 3300048928 Ga0496125_0020646 Ga0496125_0020646_1492_2250 201
103 3300025294 Ga0209025_1047438 Ga0209025_10474381 203
104 3300025294 Ga0209025_1047440 Ga0209025_10474401 203
105 3300003187 JGI25151J46595_10001774 JGI25151J46595_1000177415 204
106 3300003187 JGI25151J46595_10015828 JGI25151J46595_100158283 204
107 3300003187 JGI25151J46595_10047297 JGI25151J46595_100472972 204
108 3300003758 Ga0055532_1000046 Ga0055532_100004634 204
109 3300003781 Ga0055536_1028746 Ga0055536_10287462 204
110 3300025229 Ga0209147_100014 Ga0209147_10001494 204
111 3300025284 Ga0209130_1031040 Ga0209130_10310402 204
112 3300025292 Ga0209676_1000911 Ga0209676_100091138 204
113 3300025294 Ga0209025_1000041 Ga0209025_10000415 204
114 3300025294 Ga0209025_1001579 Ga0209025_10015792 204
115 3300025294 Ga0209025_1005375 Ga0209025_10053752 204
116 3300031995 Ga0307409_100143148 Ga0307409_1001431482 204
117 3300031995 Ga0307409_100329337 Ga0307409_1003293372 204
118 3300032002 Ga0307416_100008536 Ga0307416_1000085362 204
119 3300046520 Ga0495637_0026543 Ga0495637_0026543_1298_2077 204
120 3300046520 Ga0495637_0130334 Ga0495637_0130334_60_791 204
121 3300046691 Ga0495670_0161338 Ga0495670_0161338_116_835 204
122 3300046810 Ga0495660_0011994 Ga0495660_0011994_4180_4983 204
123 3300048904 Ga0496101_0134783 Ga0496101_0134783_681_1412 204
124 3300048905 Ga0496102_0032701 Ga0496102_0032701_2053_2760 204
125 3300048913 Ga0496110_0257414 Ga0496110_0257414_221_952 204
126 3300048919 Ga0496116_0006764 Ga0496116_0006764_3804_4586 204
127 3300048919 Ga0496116_0059961 Ga0496116_0059961_709_1578 204
128 3300048919 Ga0496116_0060708 Ga0496116_0060708_123_956 204
129 3300048920 Ga0496117_0005237 Ga0496117_0005237_7772_8554 204
130 3300048921 Ga0496118_0080111 Ga0496118_0080111_911_1693 204
131 3300048922 Ga0496119_0013102 Ga0496119_0013102_3213_3995 204
132 3300048923 Ga0496120_0008726 Ga0496120_0008726_657_1439 204
133 3300048923 Ga0496120_0010719 Ga0496120_0010719_1109_1891 204
134 3300048924 Ga0496121_0057103 Ga0496121_0057103_1174_1971 204
135 3300048925 Ga0496122_0005535 Ga0496122_0005535_7808_8575 204
136 3300048925 Ga0496122_0051472 Ga0496122_0051472_1712_2494 204
137 3300048926 Ga0496123_0001545 Ga0496123_0001545_4419_5222 204
138 3300048926 Ga0496123_0096206 Ga0496123_0096206_931_1713 204
139 3300048927 Ga0496124_0002171 Ga0496124_0002171_22882_23685 204
140 3300048927 Ga0496124_0191407 Ga0496124_0191407_315_1097 204
141 3300048928 Ga0496125_0002304 Ga0496125_0002304_4485_5267 204
142 3300048928 Ga0496125_0136522 Ga0496125_0136522_149_952 204
143 3300048928 Ga0496125_0147213 Ga0496125_0147213_691_1524 204
144 3300048929 Ga0496126_0004000 Ga0496126_0004000_4063_4845 204
145 iso_pu_bacteria 2721755693 2723605018 204
146 iso_pu_bacteria 2728369359 2730135663 204
147 iso_pu_bacteria 2738541295 2738813897 204
148 iso_pu_bacteria 2751185905 2753810936 204
149 iso_pu_bacteria 2802428803 2802437333 204
150 iso_pu_bacteria 2939702853 2939704684 204
151 iso_pu_bacteria 2988225383 2988228882 204
152 iso_pu_bacteria 2996706504 2996710676 204

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12847

Methyltransf_18

Methyltransferase domain

36

188

0.97

PF04816

TrmK

tRNA (adenine(22)-N(1))-methyltransferase

53

279

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6q56-assembly4.cif.gz_D crystal structure of the b. subtilis m1a22 trna methyltransferase trmk 0.9667 3 203
3gnl-assembly2.cif.gz_B structure of uncharacterized protein (lmof2365_1472) from listeria monocytogenes serotype 4b 0.9491 5 203
6q56-assembly4.cif.gz_D crystal structure of the b. subtilis m1a22 trna methyltransferase trmk 0.9482 3 203
3kr9-assembly1.cif.gz_A crystal structure of streptococcus pneumoniae sp1610, a putative trna (m1a22) methyltransferase 0.948 5 203
3lec-assembly1.cif.gz_A the crystal structure of a protein in the nadb-rossmann superfamily from streptococcus agalactiae to 1.8a 0.9472 5 203
ID Description Score Start End Superfamily
3lecA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9662 5 159 3.40.50.150
af_Q2FY13_1_163_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9613 5 164 3.40.50.150
3gnlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9558 5 164 3.40.50.150
3gnlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9499 5 164 3.40.50.150
af_Q2FY13_1_163_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9383 5 164 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A3E0KDE0-F1-model_v4 SAM-dependent methyltransferase 0.9886 5 107 GO:0008168
GO:0032259
AF-A0A1N7IIL9-F1-model_v4 tRNA (Adenine22-N1)-methyltransferase 0.9837 5 203 GO:0032259
GO:0160105
AF-A0A7X9GWE3-F1-model_v4 SAM-dependent methyltransferase 0.9816 5 159 GO:0008168
GO:0032259
AF-A0A2U3KTL8-F1-model_v4 tRNA (Adenine(22)-N(1))-methyltransferase (EC 2.1.1.217) 0.9712 1 95 GO:0032259
GO:0160105
AF-A0A845DX79-F1-model_v4 tRNA (Adenine(22)-N(1))-methyltransferase TrmK 0.9679 1 203 GO:0032259
GO:0160105

Feature Viewer

pLDDT pTM Quality
93.6 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map