F213888

General Info

Members Datasets Scaffolds Average Seq Length
152 119 152 458

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100024436|Ga0068860_1000244362
Length 500
Sequence MGVPRPDKCRSNETGTLSIRQFEGHPFLSWQTPPWMKHTAHGYWLEEAPEVEELPALEGERRADVVIVGGGYTGMWAAWHLKQLEPEADVVLLEGDRCGHGPSGRNGGFCNVMWFSLPNMRARWGDAEALAVARAAEDAARGIGEFCEGEEVDAWYTPGGYLQVSTAEAHDGVWADALVACRELGAGGAVEPLSAEQVAARCASPAFRAGAFYPTSATVQPARLALGLRERLRARGVAVHEHSPVTRLVDSAGGVEAHTAGGLVRARSAVLAVGAAATAPRGPLRNRLTVASSHIVLTEPVPDLLEEVDWTGGECITDSRSLIDYFRTTPDGRILFGWGGGRIAMGARLHGNSELDADVVSQAAAHLWDYFPGLGHRAIAHAWGGPIDASPTHLPLVLPLGGNRAFAAAGYTGNGVGPSHMVGRTLASLALDRRDDHSRLAFIDPSPPRVPLEPFSWIGGEAIRAGIMRKESAELAGRSPSLMSSLIARIPELIGFHIGR

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
65 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
71 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
96 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
117 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
118 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
119 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 15.79
Rhizosphere 82.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100013435 3300005329 Bacteria 7142
2 Ga0070683_100203808 3300005329 Bacteria 1879
3 Ga0070691_10000005 3300005341 Bacteria 71203
4 Ga0070674_100000003 3300005356 Bacteria 258221
5 Ga0070674_100065708 3300005356 Bacteria 2547
6 Ga0070673_100045548 3300005364 Bacteria 3402
7 Ga0070688_100153831 3300005365 Bacteria 1574
8 Ga0070714_100042675 3300005435 Bacteria 3833
9 Ga0070711_100015166 3300005439 Bacteria 4872
10 Ga0070678_100219648 3300005456 Bacteria 1579
11 Ga0070684_100007020 3300005535 Bacteria 8751
12 Ga0070684_100038445 3300005535 Bacteria 4111
13 Ga0070686_100024729 3300005544 Bacteria 3603
14 Ga0070665_100002483 3300005548 Bacteria 20309
15 Ga0068855_100146085 3300005563 Bacteria 2692
16 Ga0068856_100038975 3300005614 Bacteria 4665
17 Ga0068856_100050952 3300005614 Bacteria 4082
18 Ga0068852_100000058 3300005616 Bacteria 75312
19 Ga0068864_100000035 3300005618 Bacteria 195218
20 Ga0068866_10000002 3300005718 Bacteria 394090
21 Ga0068860_100024436 3300005843 Bacteria 5838
22 Ga0068862_100000391 3300005844 Bacteria 47191
23 Ga0081455_10040961 3300005937 Bacteria 4080
24 Ga0081540_1015457 3300005983 Bacteria 4833
25 Ga0075364_10008366 3300006051 Bacteria 6181
26 Ga0070715_10000003 3300006163 Bacteria 345282
27 Ga0070712_100001300 3300006175 Bacteria 15100
28 Ga0070712_100039747 3300006175 Bacteria 3220
29 Ga0097621_100099689 3300006237 Bacteria 2442
30 Ga0075430_100051149 3300006846 Bacteria 3483
31 Ga0075431_100091556 3300006847 Bacteria 3138
32 Ga0075433_10000093 3300006852 Bacteria 42077
33 Ga0105245_10010739 3300009098 Bacteria 7967
34 Ga0105242_10001490 3300009176 Bacteria 18435
35 Ga0105242_10039421 3300009176 Bacteria 3802
36 Ga0105238_10000028 3300009551 Bacteria 188361
37 Ga0105249_10000841 3300009553 Bacteria 27506
38 Ga0105246_10114893 3300011119 Bacteria 1984
39 Ga0157370_10029258 3300013104 Bacteria 5411
40 Ga0157374_10000973 3300013296 Bacteria 24818
41 Ga0157374_10084742 3300013296 Bacteria 3013
42 Ga0157380_10000628 3300014326 Bacteria 21682
43 Ga0157379_10031260 3300014968 Bacteria 4743
44 Ga0207656_10000354 3300025321 Bacteria 15472
45 Ga0207642_10000001 3300025899 Bacteria 714030
46 Ga0207642_10000003 3300025899 Bacteria 650651
47 Ga0207642_10000004 3300025899 Bacteria 407822
48 Ga0207688_10034262 3300025901 Bacteria 2811
49 Ga0207685_10000003 3300025905 Bacteria 344527
50 Ga0207693_10000859 3300025915 Bacteria 27121
51 Ga0207693_10013517 3300025915 Bacteria 6579
52 Ga0207663_10012296 3300025916 Bacteria 4624
53 Ga0207694_10000008 3300025924 Bacteria 484902
54 Ga0207664_10027788 3300025929 Bacteria 4294
55 Ga0207706_10000026 3300025933 Bacteria 149379
56 Ga0207686_10000271 3300025934 Bacteria 38452
57 Ga0207670_10048738 3300025936 Bacteria 2829
58 Ga0207669_10000023 3300025937 Bacteria 96638
59 Ga0207711_10000019 3300025941 Bacteria 412779
60 Ga0207661_10000142 3300025944 Bacteria 45456
61 Ga0207667_10051919 3300025949 Bacteria 4321
62 Ga0207651_10006640 3300025960 Bacteria 6083
63 Ga0207712_10008190 3300025961 Bacteria 6607
64 Ga0207668_10002710 3300025972 Bacteria 10367
65 Ga0207708_10117375 3300026075 Bacteria 2071
66 Ga0207702_10004385 3300026078 Bacteria 12570
67 Ga0207702_10012708 3300026078 Bacteria 7006
68 Ga0207641_10000072 3300026088 Bacteria 151067
69 Ga0207641_10226547 3300026088 Bacteria 1736
70 Ga0207676_10000026 3300026095 Bacteria 248593
71 Ga0207675_100097760 3300026118 Bacteria 2764
72 Ga0207683_10211439 3300026121 Bacteria 1766
73 Ga0207698_10000002 3300026142 Bacteria 404991
74 Ga0268266_10025918 3300028379 Bacteria 4988
75 Ga0268265_10000440 3300028380 Bacteria 43839
76 Ga0265337_1000025 3300028556 Bacteria 70787
77 Ga0265322_10000003 3300028654 Bacteria 468671
78 Ga0265324_10000074 3300029957 Bacteria 78102
79 Ga0265320_10000001 3300031240 Bacteria 847191
80 Ga0265329_10003237 3300031242 Bacteria 7135
81 Ga0265339_10018856 3300031249 Bacteria 4060
82 Ga0265331_10000665 3300031250 Bacteria 29661
83 Ga0265327_10000003 3300031251 Bacteria 852750
84 Ga0265314_10000222 3300031711 Bacteria 84593
85 Ga0265342_10058014 3300031712 Bacteria 2289
86 Ga0373937_0028999 3300036401 Bacteria 5012
87 Ga0395899_0060750 3300037312 Bacteria 2784
88 Ga0395900_0013705 3300037418 Bacteria 8276
89 Ga0395898_0001770 3300037466 Bacteria 28211
90 Ga0395898_0078655 3300037466 Bacteria 3182
91 Ga0395905_0005512 3300037471 Bacteria 12914
92 Ga0395905_0220372 3300037471 Bacteria 1776
93 Ga0395901_0001156 3300038443 Bacteria 28021
94 Ga0395901_0151218 3300038443 Unclassified 2439
95 Ga0466963_0067904 3300044694 Bacteria 2393
96 Ga0466967_0064892 3300045976 Bacteria 3248
97 Ga0466967_0124612 3300045976 Bacteria 2385
98 Ga0495603_0003121 3300046455 Bacteria 9847
99 Ga0495603_0109014 3300046455 Bacteria 1616
100 Ga0495653_0053450 3300046463 Bacteria 3090
101 Ga0495582_0000159 3300046473 Bacteria 36459
102 Ga0495628_0000858 3300046516 Bacteria 28086
103 Ga0495628_0042832 3300046516 Bacteria 3608
104 Ga0495630_0005060 3300046517 Bacteria 9274
105 Ga0495644_0000814 3300046523 Bacteria 12836
106 Ga0495587_0016186 3300046536 Bacteria 4642
107 Ga0495622_0001786 3300046557 Bacteria 10602
108 Ga0495667_0000042 3300046559 Bacteria 124237
109 Ga0495634_0000024 3300046642 Bacteria 116230
110 Ga0495634_0011960 3300046642 Bacteria 6296
111 Ga0495635_0000009 3300046663 Bacteria 259024
112 Ga0495635_0052410 3300046663 Bacteria 2811
113 Ga0495657_0006911 3300046675 Bacteria 8819
114 Ga0495658_0000301 3300046683 Bacteria 27948
115 Ga0495604_0000513 3300047317 Bacteria 34041
116 Ga0495676_0066471 3300047321 Bacteria 2794
117 Ga0495680_0011995 3300047322 Bacteria 7648
118 Ga0495680_0072372 3300047322 Bacteria 2622
119 Ga0495602_0000188 3300048088 Bacteria 58305
120 Ga0496100_0084279 3300048903 Bacteria 2154
121 Ga0496101_0018194 3300048904 Bacteria 4774
122 Ga0496102_0000139 3300048905 Bacteria 98670
123 Ga0496103_0000001 3300048906 Bacteria 643471
124 Ga0496103_0125400 3300048906 Bacteria 1637
125 Ga0496104_0000139 3300048907 Bacteria 67432
126 Ga0496105_0000054 3300048908 Bacteria 89081
127 Ga0496105_0065429 3300048908 Bacteria 3000
128 Ga0496106_0002711 3300048909 Bacteria 13126
129 Ga0496106_0004743 3300048909 Bacteria 10054
130 Ga0496108_0007744 3300048911 Bacteria 8701
131 Ga0496108_0007748 3300048911 Bacteria 8699
132 Ga0496109_0000035 3300048912 Bacteria 159744
133 Ga0496109_0007446 3300048912 Bacteria 9267
134 Ga0496110_0125256 3300048913 Bacteria 2318
135 Ga0496112_0000002 3300048915 Bacteria 782039
136 Ga0496112_0001898 3300048915 Bacteria 16486
137 Ga0496112_0084588 3300048915 Bacteria 3138
138 Ga0496113_0000093 3300048916 Bacteria 38914
139 Ga0496113_0045047 3300048916 Bacteria 3270
140 Ga0496114_0000043 3300048917 Bacteria 131720
141 Ga0496114_0010491 3300048917 Bacteria 7372
142 Ga0496115_0000005 3300048918 Bacteria 290756
143 Ga0496115_0000211 3300048918 Bacteria 54033
144 Ga0501042_0055921 3300049578 Bacteria 2816
145 Ga0501075_0005110 3300049591 Bacteria 8968
146 Ga0501076_0043750 3300049592 Bacteria 3530
147 nmdc:mga0a205_12_c2 3300050515 Bacteria 69190
148 Ga0495655_0000016 3300053083 Bacteria 50674
149 Ga0495619_0000172 3300053085 Bacteria 47601
150 Ga0495619_0006920 3300053085 Bacteria 7170
151 Ga0495619_0018112 3300053085 Bacteria 4466
152 Ga0500628_000027 3300053129 Bacteria 60626

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048909 Ga0496106_0004743 Ga0496106_0004743_28_1191 365
2 3300013296 Ga0157374_10084742 Ga0157374_100847423 372
3 3300046536 Ga0495587_0016186 Ga0495587_0016186_134_1300 372
4 3300047317 Ga0495604_0000513 Ga0495604_0000513_19062_20228 372
5 3300005618 Ga0068864_100000035 Ga0068864_100000035118 390
6 3300026095 Ga0207676_10000026 Ga0207676_1000002662 390
7 3300005548 Ga0070665_100002483 Ga0070665_10000248322 410
8 3300009551 Ga0105238_10000028 Ga0105238_100000289 410
9 3300025924 Ga0207694_10000008 Ga0207694_10000008296 410
10 3300028379 Ga0268266_10025918 Ga0268266_100259184 410
11 3300046523 Ga0495644_0000814 Ga0495644_0000814_1611_2891 410
12 3300048909 Ga0496106_0002711 Ga0496106_0002711_11658_12938 410
13 3300048911 Ga0496108_0007748 Ga0496108_0007748_2125_3450 410
14 3300049578 Ga0501042_0055921 Ga0501042_0055921_1505_2785 410
15 3300045976 Ga0466967_0124612 Ga0466967_0124612_533_1900 416
16 3300044694 Ga0466963_0067904 Ga0466963_0067904_100_1467 419
17 3300048913 Ga0496110_0125256 Ga0496110_0125256_67_1494 419
18 3300005563 Ga0068855_100146085 Ga0068855_1001460852 423
19 3300006051 Ga0075364_10008366 Ga0075364_100083662 423
20 3300025949 Ga0207667_10051919 Ga0207667_100519193 423
21 3300006846 Ga0075430_100051149 Ga0075430_1000511493 425
22 3300014326 Ga0157380_10000628 Ga0157380_100006283 428
23 3300026121 Ga0207683_10211439 Ga0207683_102114391 430
24 3300048905 Ga0496102_0000139 Ga0496102_0000139_97204_98601 430
25 3300048906 Ga0496103_0000001 Ga0496103_0000001_222820_224217 430
26 3300006847 Ga0075431_100091556 Ga0075431_1000915562 431
27 3300026075 Ga0207708_10117375 Ga0207708_101173752 431
28 3300045976 Ga0466967_0064892 Ga0466967_0064892_1037_2404 432
29 3300026088 Ga0207641_10000072 Ga0207641_10000072120 434
30 3300046642 Ga0495634_0000024 Ga0495634_0000024_32387_33784 434
31 3300005356 Ga0070674_100000003 Ga0070674_10000000326 438
32 3300005718 Ga0068866_10000002 Ga0068866_10000002385 438
33 3300025899 Ga0207642_10000001 Ga0207642_10000001233 438
34 3300025899 Ga0207642_10000003 Ga0207642_10000003233 438
35 3300025899 Ga0207642_10000004 Ga0207642_10000004233 438
36 3300025937 Ga0207669_10000023 Ga0207669_1000002329 438
37 3300005356 Ga0070674_100065708 Ga0070674_1000657082 439
38 3300005535 Ga0070684_100038445 Ga0070684_1000384454 439
39 3300048915 Ga0496112_0084588 Ga0496112_0084588_104_1471 439
40 3300037471 Ga0395905_0220372 Ga0395905_0220372_307_1719 440
41 3300005365 Ga0070688_100153831 Ga0070688_1001538311 442
42 3300005544 Ga0070686_100024729 Ga0070686_1000247292 442
43 3300006175 Ga0070712_100039747 Ga0070712_1000397472 442
44 3300009098 Ga0105245_10010739 Ga0105245_100107393 442
45 3300025901 Ga0207688_10034262 Ga0207688_100342622 442
46 3300025915 Ga0207693_10013517 Ga0207693_100135172 442
47 3300046455 Ga0495603_0109014 Ga0495603_0109014_129_1529 442
48 3300047321 Ga0495676_0066471 Ga0495676_0066471_260_1660 442
49 3300048903 Ga0496100_0084279 Ga0496100_0084279_707_2107 442
50 3300048904 Ga0496101_0018194 Ga0496101_0018194_1086_2486 442
51 3300048906 Ga0496103_0125400 Ga0496103_0125400_203_1603 442
52 3300048908 Ga0496105_0065429 Ga0496105_0065429_67_1467 442
53 3300048912 Ga0496109_0007446 Ga0496109_0007446_3932_5332 442
54 3300048916 Ga0496113_0045047 Ga0496113_0045047_67_1467 442
55 3300048917 Ga0496114_0010491 Ga0496114_0010491_5646_7046 442
56 3300026118 Ga0207675_100097760 Ga0207675_1000977602 443
57 3300046557 Ga0495622_0001786 Ga0495622_0001786_8776_10236 443
58 3300006175 Ga0070712_100001300 Ga0070712_10000130015 444
59 3300009176 Ga0105242_10039421 Ga0105242_100394212 444
60 3300025915 Ga0207693_10000859 Ga0207693_1000085916 444
61 3300048911 Ga0496108_0007744 Ga0496108_0007744_5693_7093 445
62 3300048912 Ga0496109_0000035 Ga0496109_0000035_115504_116904 445
63 3300037312 Ga0395899_0060750 Ga0395899_0060750_522_1922 448
64 3300037418 Ga0395900_0013705 Ga0395900_0013705_5257_6657 448
65 3300037466 Ga0395898_0001770 Ga0395898_0001770_20541_21941 448
66 3300037471 Ga0395905_0005512 Ga0395905_0005512_5612_7012 448
67 3300038443 Ga0395901_0001156 Ga0395901_0001156_26355_27755 448
68 3300005329 Ga0070683_100203808 Ga0070683_1002038082 449
69 3300005364 Ga0070673_100045548 Ga0070673_1000455482 449
70 3300005439 Ga0070711_100015166 Ga0070711_1000151663 449
71 3300005456 Ga0070678_100219648 Ga0070678_1002196481 449
72 3300005614 Ga0068856_100038975 Ga0068856_1000389754 449
73 3300005843 Ga0068860_100024436 Ga0068860_1000244362 449
74 3300005937 Ga0081455_10040961 Ga0081455_100409612 449
75 3300005983 Ga0081540_1015457 Ga0081540_10154574 449
76 3300006163 Ga0070715_10000003 Ga0070715_1000000318 449
77 3300006237 Ga0097621_100099689 Ga0097621_1000996892 449
78 3300006852 Ga0075433_10000093 Ga0075433_1000009316 449
79 3300009176 Ga0105242_10001490 Ga0105242_1000149013 449
80 3300013296 Ga0157374_10000973 Ga0157374_1000097321 449
81 3300025905 Ga0207685_10000003 Ga0207685_1000000318 449
82 3300025916 Ga0207663_10012296 Ga0207663_100122963 449
83 3300025933 Ga0207706_10000026 Ga0207706_1000002627 449
84 3300025934 Ga0207686_10000271 Ga0207686_1000027118 449
85 3300025936 Ga0207670_10048738 Ga0207670_100487382 449
86 3300025960 Ga0207651_10006640 Ga0207651_100066402 449
87 3300026078 Ga0207702_10004385 Ga0207702_100043858 449
88 3300028556 Ga0265337_1000025 Ga0265337_100002527 449
89 3300028654 Ga0265322_10000003 Ga0265322_10000003177 449
90 3300029957 Ga0265324_10000074 Ga0265324_1000007443 449
91 3300031240 Ga0265320_10000001 Ga0265320_10000001177 449
92 3300031242 Ga0265329_10003237 Ga0265329_100032377 449
93 3300031249 Ga0265339_10018856 Ga0265339_100188563 449
94 3300031250 Ga0265331_10000665 Ga0265331_100006652 449
95 3300031251 Ga0265327_10000003 Ga0265327_10000003177 449
96 3300031711 Ga0265314_10000222 Ga0265314_1000022251 449
97 3300031712 Ga0265342_10058014 Ga0265342_100580143 449
98 3300036401 Ga0373937_0028999 Ga0373937_0028999_3604_5001 449
99 3300037466 Ga0395898_0078655 Ga0395898_0078655_1006_2406 449
100 3300038443 Ga0395901_0151218 Ga0395901_0151218_573_1973 449
101 3300046455 Ga0495603_0003121 Ga0495603_0003121_1551_2948 449
102 3300046463 Ga0495653_0053450 Ga0495653_0053450_430_1827 449
103 3300046473 Ga0495582_0000159 Ga0495582_0000159_10145_11548 449
104 3300046516 Ga0495628_0000858 Ga0495628_0000858_12351_13748 449
105 3300046516 Ga0495628_0042832 Ga0495628_0042832_72_1469 449
106 3300046517 Ga0495630_0005060 Ga0495630_0005060_7162_8559 449
107 3300046559 Ga0495667_0000042 Ga0495667_0000042_113024_114421 449
108 3300046642 Ga0495634_0011960 Ga0495634_0011960_1775_3175 449
109 3300046663 Ga0495635_0000009 Ga0495635_0000009_80271_81668 449
110 3300046663 Ga0495635_0052410 Ga0495635_0052410_332_1729 449
111 3300046675 Ga0495657_0006911 Ga0495657_0006911_1011_2408 449
112 3300046683 Ga0495658_0000301 Ga0495658_0000301_24912_26315 449
113 3300047322 Ga0495680_0011995 Ga0495680_0011995_4368_5765 449
114 3300047322 Ga0495680_0072372 Ga0495680_0072372_880_2277 449
115 3300048088 Ga0495602_0000188 Ga0495602_0000188_46328_47725 449
116 3300048907 Ga0496104_0000139 Ga0496104_0000139_20489_21886 449
117 3300048908 Ga0496105_0000054 Ga0496105_0000054_53989_55386 449
118 3300048915 Ga0496112_0000002 Ga0496112_0000002_477541_478938 449
119 3300048918 Ga0496115_0000005 Ga0496115_0000005_254191_255588 449
120 3300049591 Ga0501075_0005110 Ga0501075_0005110_7525_8922 449
121 3300049592 Ga0501076_0043750 Ga0501076_0043750_2028_3425 449
122 3300050515 nmdc:mga0a205_12_c2 nmdc:mga0a205_12_c2_16525_17922 449
123 3300053083 Ga0495655_0000016 Ga0495655_0000016_47426_48823 449
124 3300053085 Ga0495619_0000172 Ga0495619_0000172_45137_46534 449
125 3300053085 Ga0495619_0006920 Ga0495619_0006920_5405_6802 449
126 3300053085 Ga0495619_0018112 Ga0495619_0018112_2217_3614 449
127 3300053129 Ga0500628_000027 Ga0500628_000027_1633_3030 449
128 3300005329 Ga0070683_100013435 Ga0070683_1000134356 450
129 3300005341 Ga0070691_10000005 Ga0070691_100000059 450
130 3300005435 Ga0070714_100042675 Ga0070714_1000426752 450
131 3300005535 Ga0070684_100007020 Ga0070684_1000070208 450
132 3300005614 Ga0068856_100050952 Ga0068856_1000509523 450
133 3300005616 Ga0068852_100000058 Ga0068852_10000005816 450
134 3300005844 Ga0068862_100000391 Ga0068862_10000039111 450
135 3300009553 Ga0105249_10000841 Ga0105249_1000084128 450
136 3300011119 Ga0105246_10114893 Ga0105246_101148932 450
137 3300013104 Ga0157370_10029258 Ga0157370_100292585 450
138 3300014968 Ga0157379_10031260 Ga0157379_100312602 450
139 3300025321 Ga0207656_10000354 Ga0207656_100003544 450
140 3300025929 Ga0207664_10027788 Ga0207664_100277883 450
141 3300025941 Ga0207711_10000019 Ga0207711_10000019100 450
142 3300025944 Ga0207661_10000142 Ga0207661_1000014248 450
143 3300025961 Ga0207712_10008190 Ga0207712_100081905 450
144 3300025972 Ga0207668_10002710 Ga0207668_100027108 450
145 3300026078 Ga0207702_10012708 Ga0207702_100127083 450
146 3300026088 Ga0207641_10226547 Ga0207641_102265471 450
147 3300026142 Ga0207698_10000002 Ga0207698_10000002157 450
148 3300028380 Ga0268265_10000440 Ga0268265_1000044036 450
149 3300048915 Ga0496112_0001898 Ga0496112_0001898_13485_14885 450
150 3300048916 Ga0496113_0000093 Ga0496113_0000093_13418_14818 450
151 3300048917 Ga0496114_0000043 Ga0496114_0000043_30904_32304 450
152 3300048918 Ga0496115_0000211 Ga0496115_0000211_32086_33486 450

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01266

DAO

FAD dependent oxidoreductase

64

429

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dzb-assembly1.cif.gz_A crystal structure of prephenate dehydrogenase from streptococcus thermophilus 0.9369 29 60
3dzb-assembly1.cif.gz_B crystal structure of prephenate dehydrogenase from streptococcus thermophilus 0.9336 29 60
3kd9-assembly2.cif.gz_C-2 crystal structure of pyridine nucleotide disulfide oxidoreductase from pyrococcus horikoshii 0.9328 27 61
1i8t-assembly1.cif.gz_B structure of udp-galactopyranose mutase from e.coli 0.9158 28 61
6zk7-assembly1.cif.gz_AAAA crystal structure of human pyroxd1/fad complex 0.915 29 62
ID Description Score Start End Superfamily
3iwaA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9655 29 58 3.50.50.60
3c4aA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9588 29 61 3.50.50.60
4ocgB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9563 29 61 3.50.50.60
af_Q4DY51_38_295_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9553 24 61 3.50.50.60
1nhrA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9488 29 59 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A538I050-F1-model_v4 FAD-dependent oxidoreductase 0.9009 1 447 GO:0005737
AF-A0A2W0ELJ4-F1-model_v4 FAD-dependent oxidoreductase 0.8947 7 295 GO:0005737
AF-A0A538I050-F1-model_v4 FAD-dependent oxidoreductase 0.8932 1 447 GO:0005737
AF-A0A523QXW6-F1-model_v4 FAD-dependent oxidoreductase 0.8922 8 248 GO:0005737
AF-A0A537WQK2-F1-model_v4 FAD-dependent oxidoreductase 0.8889 6 304 GO:0005737

Feature Viewer

pLDDT pTM Quality
80.35 0.87 High
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Predicted Structure (AlphaFold2)

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