F213887

General Info

Members Datasets Scaffolds Average Seq Length
152 83 138 426

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100002320|Ga0068860_10000232020
Length 449
Sequence VLVNIHHDSRREHNRLLVAGVVFLTAIALLIAFSIAVYQKKFDRVTMVTIHADRAGLQLARFGDVRLNGALVGQVRSVDDDGKDAVIKVALDPAAAKEIPANVDVRIVPTTLFGQKFISFVRPDSPSTDSLADGAVIPKDRVETNVELSKILADLFPLLRAVQPAQLNYTLNALATALQGRGEQLGQTLDQLDAYLGAISDKLPTLRQDLISLANVADTYDLAAPDLIDVLGNLTVTSKTIIDKADDLDAFFSDLQGLADTSTRVLSTNEQNLIQVGKVTEPVLRLLALYSPEFPCLIEGAADYAPVLAKSFGGNQVKQFLEFGTAQYEPYHASDRPVYGEVGHGPRCSGLPHPSIPIGPESFKDGTDIDSNPPTSPMPTALQKLQGQLQGQGRAGALGSANTSGFAGTDAEKTIVNALLAGRTGRPADSYGALGSLLYGPVVRGGGQP

Samples

Sample ID Description Type Environment
1 2643221576 Nocardioides sp. Root614 Isolate Unclassified
2 2643221590 Nocardioides sp. Root682 Isolate Unclassified
3 2643221604 Nocardioides sp. Root190 Isolate Unclassified
4 2643221615 Nocardioides sp. Root224 Isolate Unclassified
5 2643221617 Nocardioides sp. Root79 Isolate Unclassified
6 2643221620 Nocardioides sp. Root240 Isolate Unclassified
7 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
8 2643221696 Nocardioides sp. Root140 Isolate Unclassified
9 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
10 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
11 2738541305 Nocardioides sp. CF167 Isolate Unclassified
12 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
40 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
46 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
47 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
51 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
54 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
55 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
58 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
59 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
62 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
67 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
68 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
69 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
70 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
71 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
72 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
73 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
74 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
75 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
76 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
77 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
78 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
79 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
80 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
81 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
82 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
83 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.79
Metatranscriptomes 0
Isolates 9.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 37.5
Nodule 0
Rhizoplane 1.32
Rhizosphere 50.66
Stem 0
Stem Tuber 0
Unclassified 10.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10102063 3300003322 Bacteria 1864
2 rootL2_10203431 3300003322 Bacteria 1868
3 Ga0070659_100007547 3300005366 Bacteria 7903
4 Ga0070667_100016409 3300005367 Bacteria 6129
5 Ga0070667_100022233 3300005367 Bacteria 5261
6 Ga0070700_100032501 3300005441 Bacteria 3136
7 Ga0070662_100166401 3300005457 Bacteria 1728
8 Ga0070664_100039920 3300005564 Bacteria 3957
9 Ga0068860_100002320 3300005843 Bacteria 19985
10 Ga0068860_100003522 3300005843 Bacteria 16105
11 Ga0081539_10044397 3300005985 Bacteria 2566
12 Ga0075365_10000622 3300006038 Bacteria 13985
13 Ga0075365_10019785 3300006038 Bacteria 4162
14 Ga0075365_10020880 3300006038 Bacteria 4072
15 Ga0075365_10021742 3300006038 Bacteria 4007
16 Ga0075365_10028608 3300006038 Bacteria 3555
17 Ga0075365_10033080 3300006038 Bacteria 3329
18 Ga0075365_10043058 3300006038 Bacteria 2954
19 Ga0075365_10060321 3300006038 Bacteria 2530
20 Ga0075365_10062624 3300006038 Bacteria 2488
21 Ga0075365_10081614 3300006038 Bacteria 2191
22 Ga0075365_10110309 3300006038 Bacteria 1890
23 Ga0075365_10119735 3300006038 Bacteria 1815
24 Ga0075368_10010254 3300006042 Bacteria 3385
25 Ga0075368_10013848 3300006042 Bacteria 2967
26 Ga0075363_100000689 3300006048 Bacteria 11402
27 Ga0075363_100010398 3300006048 Bacteria 4418
28 Ga0075363_100011986 3300006048 Bacteria 4168
29 Ga0075363_100017989 3300006048 Bacteria 3514
30 Ga0075363_100020595 3300006048 Bacteria 3309
31 Ga0075363_100021058 3300006048 Bacteria 3278
32 Ga0075363_100035551 3300006048 Bacteria 2608
33 Ga0075364_10025362 3300006051 Bacteria 3773
34 Ga0075364_10028556 3300006051 Bacteria 3571
35 Ga0075362_10016623 3300006177 Bacteria 3016
36 Ga0075367_10004395 3300006178 Bacteria 6880
37 Ga0075367_10005620 3300006178 Bacteria 6252
38 Ga0075367_10020157 3300006178 Bacteria 3709
39 Ga0075367_10038293 3300006178 Bacteria 2791
40 Ga0075367_10048840 3300006178 Bacteria 2494
41 Ga0075370_10063451 3300006353 Bacteria 2106
42 Ga0075370_10097738 3300006353 Bacteria 1698
43 Ga0111539_10361991 3300009094 Bacteria 1688
44 Ga0157380_10192717 3300014326 Bacteria 1801
45 Ga0207647_10002919 3300025904 Bacteria 12873
46 Ga0207657_10006999 3300025919 Bacteria 11611
47 Ga0207690_10009500 3300025932 Bacteria 5776
48 Ga0207706_10205497 3300025933 Bacteria 1727
49 Ga0207709_10109737 3300025935 Bacteria 1842
50 Ga0207679_10021837 3300025945 Bacteria 4347
51 Ga0207658_10006035 3300025986 Bacteria 8273
52 Ga0207658_10011134 3300025986 Bacteria 6125
53 Ga0207708_10047138 3300026075 Bacteria 3282
54 Ga0268264_10000417 3300028381 Bacteria 60164
55 Ga0268264_10000437 3300028381 Bacteria 57431
56 Ga0307405_10021835 3300031731 Bacteria 3606
57 Ga0307409_100037863 3300031995 Bacteria 3560
58 Ga0307409_100093423 3300031995 Bacteria 2472
59 Ga0307409_100163430 3300031995 Bacteria 1950
60 Ga0307416_100010155 3300032002 Bacteria 6205
61 Ga0307416_100108292 3300032002 Bacteria 2441
62 Ga0307415_100000940 3300032126 Bacteria 13381
63 Ga0307415_100047149 3300032126 Bacteria 2900
64 Ga0395900_0049693 3300037418 Bacteria 4321
65 Ga0395898_0309851 3300037466 Bacteria 1506
66 Ga0439445_0001941 3300042004 Bacteria 4565
67 Ga0439446_0015698 3300042156 Bacteria 2102
68 Ga0439434_0004144 3300042435 Bacteria 4233
69 Ga0466972_0027733 3300044658 Bacteria 2800
70 Ga0466972_0057992 3300044658 Bacteria 1859
71 Ga0466965_0008211 3300044683 Bacteria 4823
72 Ga0466965_0022572 3300044683 Bacteria 3034
73 Ga0466965_0066358 3300044683 Bacteria 1809
74 Ga0466966_0057374 3300044684 Bacteria 2462
75 Ga0466961_0080518 3300044693 Bacteria 2062
76 Ga0466961_0162345 3300044693 Bacteria 1392
77 Ga0466963_0023604 3300044694 Bacteria 3908
78 Ga0466963_0024821 3300044694 Bacteria 3818
79 Ga0466964_0008724 3300044706 Bacteria 3811
80 Ga0466970_0001536 3300044765 Bacteria 11107
81 Ga0466970_0001683 3300044765 Bacteria 10626
82 Ga0466970_0008641 3300044765 Bacteria 5132
83 Ga0466970_0044516 3300044765 Bacteria 2363
84 Ga0466957_0006840 3300044842 Bacteria 6444
85 Ga0466960_0000786 3300044901 Bacteria 11141
86 Ga0466960_0001800 3300044901 Bacteria 7868
87 Ga0466960_0006193 3300044901 Bacteria 4791
88 Ga0466960_0053035 3300044901 Bacteria 1964
89 Ga0495664_0029872 3300046477 Bacteria 3190
90 Ga0495635_0073439 3300046663 Bacteria 2343
91 Ga0495674_0111966 3300047319 Bacteria 2313
92 Ga0496108_0081948 3300048911 Bacteria 2735
93 Ga0496110_0045045 3300048913 Bacteria 3854
94 Ga0501033_0068955 3300049570 Bacteria 2600
95 Ga0501039_0013152 3300049575 Bacteria 6325
96 Ga0501039_0026118 3300049575 Bacteria 4488
97 Ga0501040_0092672 3300049576 Bacteria 2101
98 Ga0501040_0112557 3300049576 Bacteria 1904
99 Ga0501048_0011892 3300049582 Bacteria 6491
100 Ga0501048_0014529 3300049582 Bacteria 5827
101 Ga0501067_0016059 3300049583 Bacteria 4141
102 Ga0501067_0023273 3300049583 Bacteria 3433
103 Ga0501070_0103262 3300049586 Bacteria 2357
104 Ga0501070_0295463 3300049586 Bacteria 1320
105 Ga0501072_0085145 3300049588 Bacteria 2507
106 Ga0501072_0152789 3300049588 Bacteria 1840
107 Ga0501076_0106169 3300049592 Bacteria 2267
108 Ga0501076_0264878 3300049592 Bacteria 1407
109 Ga0501035_0214460 3300049822 Bacteria 1646
110 nmdc:mga03n38_24415_c1 3300050490 Bacteria 2472
111 nmdc:mga03n38_43138_c1 3300050490 Bacteria 1976
112 nmdc:mga00v17_10300_c1 3300050491 Bacteria 5099
113 nmdc:mga00v17_14813_c1 3300050491 Bacteria 4362
114 nmdc:mga00v17_26316_c1 3300050491 Bacteria 3389
115 nmdc:mga00v17_59474_c1 3300050491 Bacteria 2345
116 nmdc:mga0yw44_12353_c1 3300050492 Bacteria 4447
117 nmdc:mga0yw44_129277_c1 3300050492 Bacteria 1633
118 nmdc:mga0yw44_14826_c1 3300050492 Bacteria 4153
119 nmdc:mga0yw44_26459_c1 3300050492 Bacteria 3314
120 nmdc:mga0yw44_46667_c1 3300050492 Bacteria 2603
121 nmdc:mga0yw44_49771_c1 3300050492 Bacteria 2531
122 nmdc:mga0yw44_55776_c1 3300050492 Bacteria 2405
123 nmdc:mga0yw44_7549_c1 3300050492 Bacteria 5357
124 nmdc:mga0yw44_8621_c1 3300050492 Bacteria 5092
125 nmdc:mga0yw44_89595_c1 3300050492 Bacteria 1942
126 nmdc:mga06z11_15970_c1 3300050494 Bacteria 3368
127 nmdc:mga06z11_68873_c1 3300050494 Bacteria 1866
128 nmdc:mga07m45_13194_c1 3300050496 Bacteria 4378
129 nmdc:mga07m45_41539_c1 3300050496 Bacteria 2575
130 nmdc:mga08y16_141283_c1 3300050511 Bacteria 2503
131 Ga0495601_0022785 3300053077 Bacteria 3848
132 Ga0500644_0000914 3300053088 Bacteria 9392
133 Ga0500644_0024403 3300053088 Bacteria 1848
134 Ga0500641_0017035 3300053096 Bacteria 2711
135 Ga0500554_007572 3300053102 Bacteria 2506
136 Ga0500556_0001044 3300053104 Bacteria 14362
137 Ga0500593_000344 3300053117 Bacteria 18726
138 Ga0466962_0030709 3300061719 Bacteria 2573

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044901 Ga0466960_0001800 Ga0466960_0001800_3308_4621 332
2 3300005441 Ga0070700_100032501 Ga0070700_1000325013 335
3 3300014326 Ga0157380_10192717 Ga0157380_101927172 335
4 3300025935 Ga0207709_10109737 Ga0207709_101097372 335
5 3300026075 Ga0207708_10047138 Ga0207708_100471382 335
6 3300006038 Ga0075365_10062624 Ga0075365_100626242 345
7 3300053096 Ga0500641_0017035 Ga0500641_0017035_1318_2463 346
8 iso_pu_bacteria 2643221961 2645721819 346
9 iso_pu_bacteria 2643221962 2645724236 346
10 3300049575 Ga0501039_0026118 Ga0501039_0026118_1083_2402 349
11 3300049576 Ga0501040_0112557 Ga0501040_0112557_52_1371 349
12 3300049582 Ga0501048_0014529 Ga0501048_0014529_3405_4724 349
13 3300049592 Ga0501076_0264878 Ga0501076_0264878_52_1371 349
14 3300003322 rootL2_10203431 rootL2_102034312 352
15 3300032002 Ga0307416_100108292 Ga0307416_1001082922 359
16 3300042004 Ga0439445_0001941 Ga0439445_0001941_123_1430 359
17 3300042156 Ga0439446_0015698 Ga0439446_0015698_630_1937 359
18 3300042435 Ga0439434_0004144 Ga0439434_0004144_2558_3865 359
19 3300006048 Ga0075363_100011986 Ga0075363_1000119864 365
20 3300050496 nmdc:mga07m45_13194_c1 nmdc:mga07m45_13194_c1_2418_3743 365
21 3300006048 Ga0075363_100035551 Ga0075363_1000355512 373
22 3300006177 Ga0075362_10016623 Ga0075362_100166232 373
23 3300006178 Ga0075367_10020157 Ga0075367_100201573 373
24 3300006353 Ga0075370_10063451 Ga0075370_100634511 373
25 3300050490 nmdc:mga03n38_43138_c1 nmdc:mga03n38_43138_c1_414_1724 373
26 3300049588 Ga0501072_0152789 Ga0501072_0152789_373_1692 374
27 3300053104 Ga0500556_0001044 Ga0500556_0001044_10769_12079 374
28 3300053117 Ga0500593_000344 Ga0500593_000344_12618_13931 374
29 3300005985 Ga0081539_10044397 Ga0081539_100443973 375
30 3300006048 Ga0075363_100000689 Ga0075363_1000006896 375
31 3300006051 Ga0075364_10025362 Ga0075364_100253623 375
32 3300006178 Ga0075367_10048840 Ga0075367_100488402 375
33 3300050490 nmdc:mga03n38_24415_c1 nmdc:mga03n38_24415_c1_58_1371 375
34 3300050491 nmdc:mga00v17_59474_c1 nmdc:mga00v17_59474_c1_956_2269 375
35 3300050494 nmdc:mga06z11_68873_c1 nmdc:mga06z11_68873_c1_19_1332 375
36 3300006051 Ga0075364_10028556 Ga0075364_100285562 377
37 3300006178 Ga0075367_10038293 Ga0075367_100382932 377
38 3300009094 Ga0111539_10361991 Ga0111539_103619911 377
39 3300031995 Ga0307409_100093423 Ga0307409_1000934232 377
40 3300049570 Ga0501033_0068955 Ga0501033_0068955_193_1449 377
41 3300049575 Ga0501039_0013152 Ga0501039_0013152_1285_2541 377
42 3300049582 Ga0501048_0011892 Ga0501048_0011892_2951_4207 377
43 3300049588 Ga0501072_0085145 Ga0501072_0085145_388_1644 377
44 3300049592 Ga0501076_0106169 Ga0501076_0106169_390_1646 377
45 3300049822 Ga0501035_0214460 Ga0501035_0214460_123_1379 377
46 3300050491 nmdc:mga00v17_14813_c1 nmdc:mga00v17_14813_c1_2169_3491 377
47 3300050494 nmdc:mga06z11_15970_c1 nmdc:mga06z11_15970_c1_1038_2357 377
48 3300050511 nmdc:mga08y16_141283_c1 nmdc:mga08y16_141283_c1_1176_2432 377
49 3300053088 Ga0500644_0000914 Ga0500644_0000914_7696_9018 377
50 3300006042 Ga0075368_10013848 Ga0075368_100138482 378
51 3300006178 Ga0075367_10004395 Ga0075367_100043954 378
52 3300044683 Ga0466965_0008211 Ga0466965_0008211_1139_2410 378
53 3300006038 Ga0075365_10021742 Ga0075365_100217423 379
54 3300006048 Ga0075363_100010398 Ga0075363_1000103983 379
55 3300050492 nmdc:mga0yw44_26459_c1 nmdc:mga0yw44_26459_c1_791_2116 379
56 3300050492 nmdc:mga0yw44_8621_c1 nmdc:mga0yw44_8621_c1_604_1938 379
57 3300053088 Ga0500644_0024403 Ga0500644_0024403_480_1811 379
58 3300005367 Ga0070667_100022233 Ga0070667_1000222335 380
59 3300005843 Ga0068860_100002320 Ga0068860_10000232020 380
60 3300006038 Ga0075365_10000622 Ga0075365_100006222 380
61 3300006038 Ga0075365_10020880 Ga0075365_100208802 380
62 3300006038 Ga0075365_10043058 Ga0075365_100430582 380
63 3300025986 Ga0207658_10006035 Ga0207658_100060355 380
64 3300028381 Ga0268264_10000417 Ga0268264_100004173 380
65 3300032126 Ga0307415_100047149 Ga0307415_1000471492 380
66 3300050491 nmdc:mga00v17_26316_c1 nmdc:mga00v17_26316_c1_1940_3289 380
67 3300050492 nmdc:mga0yw44_7549_c1 nmdc:mga0yw44_7549_c1_2041_3393 380
68 3300050492 nmdc:mga0yw44_89595_c1 nmdc:mga0yw44_89595_c1_463_1791 380
69 3300053102 Ga0500554_007572 Ga0500554_007572_899_2218 380
70 iso_pu_bacteria 2811994874 2812332538 380
71 3300037418 Ga0395900_0049693 Ga0395900_0049693_1524_2849 381
72 3300037466 Ga0395898_0309851 Ga0395898_0309851_38_1363 381
73 iso_pu_bacteria 2643221576 2643888826 381
74 iso_pu_bacteria 2643221590 2643957881 381
75 iso_pu_bacteria 2643221604 2644034388 381
76 iso_pu_bacteria 2643221617 2644098567 381
77 iso_pu_bacteria 2643221620 2644114574 381
78 iso_pu_bacteria 2738541305 2738869836 381
79 3300044684 Ga0466966_0057374 Ga0466966_0057374_578_1894 382
80 3300044693 Ga0466961_0080518 Ga0466961_0080518_68_1405 382
81 3300044694 Ga0466963_0024821 Ga0466963_0024821_801_2114 382
82 3300044765 Ga0466970_0001536 Ga0466970_0001536_3055_4371 382
83 3300044765 Ga0466970_0001683 Ga0466970_0001683_5721_7058 382
84 3300046663 Ga0495635_0073439 Ga0495635_0073439_389_1672 382
85 3300047319 Ga0495674_0111966 Ga0495674_0111966_695_1978 382
86 iso_pu_bacteria 2643221615 2644089331 382
87 iso_pu_bacteria 2643221657 2644319176 382
88 3300006038 Ga0075365_10028608 Ga0075365_100286083 383
89 3300050492 nmdc:mga0yw44_12353_c1 nmdc:mga0yw44_12353_c1_627_1949 383
90 iso_pu_bacteria 2643221696 2644531749 383
91 3300003322 rootL2_10102063 rootL2_101020632 384
92 3300005366 Ga0070659_100007547 Ga0070659_1000075474 384
93 3300005367 Ga0070667_100016409 Ga0070667_1000164093 384
94 3300005457 Ga0070662_100166401 Ga0070662_1001664012 384
95 3300005564 Ga0070664_100039920 Ga0070664_1000399202 384
96 3300005843 Ga0068860_100003522 Ga0068860_1000035227 384
97 3300006038 Ga0075365_10019785 Ga0075365_100197852 384
98 3300006038 Ga0075365_10033080 Ga0075365_100330803 384
99 3300006038 Ga0075365_10060321 Ga0075365_100603212 384
100 3300006038 Ga0075365_10081614 Ga0075365_100816142 384
101 3300006038 Ga0075365_10110309 Ga0075365_101103092 384
102 3300006038 Ga0075365_10119735 Ga0075365_101197352 384
103 3300006042 Ga0075368_10010254 Ga0075368_100102542 384
104 3300006048 Ga0075363_100017989 Ga0075363_1000179892 384
105 3300006048 Ga0075363_100020595 Ga0075363_1000205953 384
106 3300006048 Ga0075363_100021058 Ga0075363_1000210583 384
107 3300006178 Ga0075367_10005620 Ga0075367_100056202 384
108 3300006353 Ga0075370_10097738 Ga0075370_100977381 384
109 3300025904 Ga0207647_10002919 Ga0207647_100029195 384
110 3300025919 Ga0207657_10006999 Ga0207657_100069994 384
111 3300025932 Ga0207690_10009500 Ga0207690_100095005 384
112 3300025933 Ga0207706_10205497 Ga0207706_102054972 384
113 3300025945 Ga0207679_10021837 Ga0207679_100218372 384
114 3300025986 Ga0207658_10011134 Ga0207658_100111344 384
115 3300028381 Ga0268264_10000437 Ga0268264_1000043752 384
116 3300031731 Ga0307405_10021835 Ga0307405_100218352 384
117 3300031995 Ga0307409_100037863 Ga0307409_1000378633 384
118 3300031995 Ga0307409_100163430 Ga0307409_1001634302 384
119 3300032002 Ga0307416_100010155 Ga0307416_1000101553 384
120 3300032126 Ga0307415_100000940 Ga0307415_1000009405 384
121 3300044658 Ga0466972_0027733 Ga0466972_0027733_1260_2537 384
122 3300044658 Ga0466972_0057992 Ga0466972_0057992_464_1735 384
123 3300044683 Ga0466965_0022572 Ga0466965_0022572_699_1976 384
124 3300044683 Ga0466965_0066358 Ga0466965_0066358_484_1761 384
125 3300044693 Ga0466961_0162345 Ga0466961_0162345_62_1333 384
126 3300044694 Ga0466963_0023604 Ga0466963_0023604_1993_3270 384
127 3300044706 Ga0466964_0008724 Ga0466964_0008724_1998_3275 384
128 3300044765 Ga0466970_0008641 Ga0466970_0008641_134_1405 384
129 3300044765 Ga0466970_0044516 Ga0466970_0044516_688_1965 384
130 3300044842 Ga0466957_0006840 Ga0466957_0006840_4081_5358 384
131 3300044901 Ga0466960_0000786 Ga0466960_0000786_6597_7874 384
132 3300044901 Ga0466960_0006193 Ga0466960_0006193_1144_2421 384
133 3300044901 Ga0466960_0053035 Ga0466960_0053035_387_1664 384
134 3300046477 Ga0495664_0029872 Ga0495664_0029872_1521_2807 384
135 3300048911 Ga0496108_0081948 Ga0496108_0081948_895_2199 384
136 3300048913 Ga0496110_0045045 Ga0496110_0045045_690_1994 384
137 3300049576 Ga0501040_0092672 Ga0501040_0092672_110_1411 384
138 3300049583 Ga0501067_0016059 Ga0501067_0016059_2649_3926 384
139 3300049583 Ga0501067_0023273 Ga0501067_0023273_1187_2449 384
140 3300049586 Ga0501070_0103262 Ga0501070_0103262_765_2105 384
141 3300049586 Ga0501070_0295463 Ga0501070_0295463_27_1304 384
142 3300050491 nmdc:mga00v17_10300_c1 nmdc:mga00v17_10300_c1_3223_4536 384
143 3300050492 nmdc:mga0yw44_129277_c1 nmdc:mga0yw44_129277_c1_222_1544 384
144 3300050492 nmdc:mga0yw44_14826_c1 nmdc:mga0yw44_14826_c1_935_2269 384
145 3300050492 nmdc:mga0yw44_46667_c1 nmdc:mga0yw44_46667_c1_134_1465 384
146 3300050492 nmdc:mga0yw44_49771_c1 nmdc:mga0yw44_49771_c1_318_1637 384
147 3300050492 nmdc:mga0yw44_55776_c1 nmdc:mga0yw44_55776_c1_998_2317 384
148 3300050496 nmdc:mga07m45_41539_c1 nmdc:mga07m45_41539_c1_589_1908 384
149 3300053077 Ga0495601_0022785 Ga0495601_0022785_2011_3297 384
150 3300061719 Ga0466962_0030709 Ga0466962_0030709_800_2077 384
151 iso_pu_bacteria 2643221615 2644093006 384
152 iso_pu_bacteria 2643221657 2644322617 384

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02470

MlaD

MlaD protein

45

123

0.96

PF11887

Mce4_CUP1

Cholesterol uptake porter CUP1 of Mce4, putative

127

346

0.96

Feature Viewer

pLDDT pTM Quality
45.81 0.31 Low
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map