F213799

General Info

Members Datasets Scaffolds Average Seq Length
152 110 152 328

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100335033|Ga0070665_1003350331
Length 359
Sequence VLRKGVRSAREPLHHCRSGDADAVGSLAGMRIGLALPQYDYSVAGEWPLQFSTIVEHARVAERGGADSVWLSDHLFLDLAKYGGPDRREACFDPIVTLAALARTVPRVRLGTLVALEALRPATVLAKALAAIDRVSGGRLDVGLGAGWYEPEYEALGMEMPRPGKRLDRLVDALQVVNGLLGGGPFTYAGEHHGAQAATNHPPAAQQPRPRVFVGGKGDRLLRIAAQHADGWNTCWTWTPAAYEERRRVYDDACASAGRDPAAMWRTLGLYALCGEDERDLERRFDRLRELSPPGVLRGVDLATFRTGRLVGTVEEIREQVRTWEGLGVDTIILGVGAVPFQVSTVDDVELLLEACCGA

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
3 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
58 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
73 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
74 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
79 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
104 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
109 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
110 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.97
Nodule 0
Rhizoplane 13.82
Rhizosphere 81.58
Stem 0
Stem Tuber 0
Unclassified 2.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100000878 3300005347 Bacteria 20896
2 Ga0070668_100001422 3300005347 Bacteria 17258
3 Ga0070667_100002297 3300005367 Bacteria 16805
4 Ga0070667_100263766 3300005367 Bacteria 1543
5 Ga0070710_10028007 3300005437 Unclassified 3010
6 Ga0070705_100002607 3300005440 Bacteria 9037
7 Ga0070708_100024563 3300005445 Bacteria 5144
8 Ga0070681_10067113 3300005458 Bacteria 3556
9 Ga0070706_100065157 3300005467 Bacteria 3369
10 Ga0070706_100258396 3300005467 Unclassified 1626
11 Ga0070707_100367561 3300005468 Bacteria 1397
12 Ga0070698_100069816 3300005471 Bacteria 3526
13 Ga0070698_100207423 3300005471 Bacteria 1895
14 Ga0070672_100090399 3300005543 Bacteria 2469
15 Ga0070696_100057811 3300005546 Bacteria 2707
16 Ga0070665_100335033 3300005548 Unclassified 1518
17 Ga0070704_100042926 3300005549 Bacteria 3131
18 Ga0068859_100002155 3300005617 Bacteria 20004
19 Ga0068864_100085518 3300005618 Bacteria 2773
20 Ga0068861_100104618 3300005719 Bacteria 2259
21 Ga0068863_100036566 3300005841 Bacteria 4677
22 Ga0068858_100109631 3300005842 Bacteria 2577
23 Ga0068860_100000109 3300005843 Bacteria 132169
24 Ga0068862_100006731 3300005844 Bacteria 9530
25 Ga0068862_100017117 3300005844 Bacteria 6032
26 Ga0081539_10038702 3300005985 Bacteria 2823
27 Ga0070717_10044843 3300006028 Bacteria 3613
28 Ga0075363_100074979 3300006048 Bacteria 1843
29 Ga0075428_100019880 3300006844 Bacteria 7435
30 Ga0075430_100026276 3300006846 Bacteria 4954
31 Ga0075431_100020047 3300006847 Bacteria 6828
32 Ga0075431_100111269 3300006847 Bacteria 2826
33 Ga0075431_100259441 3300006847 Bacteria 1764
34 Ga0075433_10001314 3300006852 Bacteria 18190
35 Ga0075434_100005889 3300006871 Bacteria 11205
36 Ga0075429_100050664 3300006880 Bacteria 3613
37 Ga0097620_100002155 3300006931 Bacteria 20004
38 Ga0075435_100016689 3300007076 Bacteria 5539
39 Ga0075435_100193088 3300007076 Unclassified 1724
40 Ga0111539_10083075 3300009094 Bacteria 3767
41 Ga0111539_10181074 3300009094 Bacteria 2461
42 Ga0105245_10003332 3300009098 Bacteria 14419
43 Ga0105245_10392042 3300009098 Bacteria 1386
44 Ga0114129_10082258 3300009147 Bacteria 4475
45 Ga0114129_10193271 3300009147 Bacteria 2762
46 Ga0105243_10039596 3300009148 Bacteria 3675
47 Ga0105242_10026223 3300009176 Bacteria 4619
48 Ga0105242_10166886 3300009176 Unclassified 1932
49 Ga0105249_10407675 3300009553 Bacteria 1391
50 Ga0213876_10054354 3300021384 Bacteria 2114
51 Ga0207684_10328594 3300025910 Unclassified 1317
52 Ga0207707_10369785 3300025912 Bacteria 1234
53 Ga0207649_10286062 3300025920 Bacteria 1200
54 Ga0207650_10018450 3300025925 Bacteria 4896
55 Ga0207686_10049330 3300025934 Bacteria 2613
56 Ga0207686_10165731 3300025934 Unclassified 1553
57 Ga0207669_10307934 3300025937 Unclassified 1207
58 Ga0207691_10025467 3300025940 Bacteria 5554
59 Ga0207661_10402335 3300025944 Bacteria 1242
60 Ga0207651_10212005 3300025960 Bacteria 1560
61 Ga0207668_10005257 3300025972 Bacteria 7617
62 Ga0207668_10089195 3300025972 Bacteria 2260
63 Ga0207703_10049870 3300026035 Bacteria 3385
64 Ga0207708_10027594 3300026075 Bacteria 4300
65 Ga0207641_10014767 3300026088 Bacteria 6404
66 Ga0207648_10466667 3300026089 Bacteria 1151
67 Ga0268266_10289709 3300028379 Unclassified 1525
68 Ga0268266_10317327 3300028379 Bacteria 1458
69 Ga0268264_10000002 3300028381 Bacteria 1153045
70 Ga0265334_10038444 3300028573 Bacteria 1882
71 Ga0265338_10000149 3300028800 Bacteria 127027
72 Ga0265325_10001909 3300031241 Bacteria 14395
73 Ga0265339_10000660 3300031249 Bacteria 26631
74 Ga0265327_10002907 3300031251 Bacteria 17173
75 Ga0265327_10007518 3300031251 Bacteria 8389
76 Ga0265316_10008603 3300031344 Bacteria 9456
77 Ga0265313_10000808 3300031595 Bacteria 31611
78 Ga0265314_10032240 3300031711 Bacteria 3856
79 Ga0307415_100272713 3300032126 Bacteria 1387
80 Ga0373946_0037871 3300035171 Bacteria 1962
81 Ga0316574_0002316 3300035398 Bacteria 9497
82 Ga0373937_0534555 3300036401 Bacteria 1114
83 Ga0436365_0054050 3300039437 Bacteria 4034
84 Ga0436365_1671985 3300039437 Bacteria 4595
85 Ga0436365_1702191 3300039437 Bacteria 116634
86 Ga0495641_0039817 3300046461 Unclassified 2189
87 Ga0495628_0080077 3300046516 Bacteria 2539
88 Ga0495630_0013651 3300046517 Bacteria 5905
89 Ga0495630_0090858 3300046517 Bacteria 2307
90 Ga0495630_0151775 3300046517 Bacteria 1763
91 Ga0495630_0314167 3300046517 Unclassified 1198
92 Ga0495666_0082258 3300046526 Unclassified 1522
93 Ga0495640_0004119 3300046533 Bacteria 11636
94 Ga0495667_0025275 3300046559 Bacteria 4003
95 Ga0495667_0057302 3300046559 Unclassified 2561
96 Ga0495635_0093520 3300046663 Unclassified 2056
97 Ga0495657_0087677 3300046675 Bacteria 2002
98 Ga0495658_0009639 3300046683 Bacteria 4815
99 Ga0495613_0078375 3300046689 Bacteria 2404
100 Ga0495684_0039522 3300047471 Bacteria 3617
101 Ga0496101_0059738 3300048904 Bacteria 2764
102 Ga0496101_0411175 3300048904 Bacteria 1066
103 Ga0496102_0030149 3300048905 Bacteria 4854
104 Ga0496102_0159182 3300048905 Bacteria 2124
105 Ga0496102_0216395 3300048905 Bacteria 1806
106 Ga0496103_0030954 3300048906 Bacteria 3258
107 Ga0496104_0006616 3300048907 Bacteria 10197
108 Ga0496104_0242997 3300048907 Unclassified 1713
109 Ga0496105_0007619 3300048908 Bacteria 8392
110 Ga0496105_0030110 3300048908 Bacteria 4447
111 Ga0496105_0129092 3300048908 Bacteria 2085
112 Ga0496108_0042740 3300048911 Bacteria 3784
113 Ga0496109_0031756 3300048912 Bacteria 4742
114 Ga0496109_0055932 3300048912 Bacteria 3600
115 Ga0496112_0003039 3300048915 Bacteria 13725
116 Ga0496112_0016821 3300048915 Bacteria 6861
117 Ga0496114_0012406 3300048917 Bacteria 6820
118 Ga0496114_0059089 3300048917 Bacteria 3203
119 Ga0496114_0105821 3300048917 Bacteria 2407
120 Ga0496114_0289451 3300048917 Unclassified 1445
121 Ga0496115_0022055 3300048918 Bacteria 4926
122 Ga0501034_0026188 3300049571 Bacteria 5938
123 Ga0501037_0095434 3300049573 Bacteria 2150
124 Ga0501046_0011406 3300049580 Bacteria 7601
125 Ga0501047_0059322 3300049581 Bacteria 3694
126 Ga0501070_0004978 3300049586 Bacteria 11336
127 Ga0501073_0150634 3300049589 Bacteria 1612
128 Ga0501079_0435959 3300049741 Bacteria 1029
129 Ga0501044_0121299 3300049823 Bacteria 2615
130 nmdc:mga03n38_54464_c1 3300050490 Bacteria 1798
131 nmdc:mga05p37_587609_c1 3300050507 Unclassified 1260
132 nmdc:mga05p37_70397_c1 3300050507 Bacteria 4303
133 nmdc:mga09592_36190_c1 3300050508 Bacteria 4136
134 nmdc:mga0qj67_278598_c1 3300050509 Bacteria 1356
135 nmdc:mga0qj67_82165_c1 3300050509 Bacteria 2584
136 nmdc:mga06r32_11104_c1 3300050510 Bacteria 8106
137 nmdc:mga06r32_126893_c1 3300050510 Unclassified 2521
138 nmdc:mga08y16_125405_c1 3300050511 Bacteria 2671
139 nmdc:mga08y16_395896_c1 3300050511 Bacteria 1414
140 nmdc:mga08y16_65993_c1 3300050511 Bacteria 3777
141 nmdc:mga0n895_112906_c1 3300050512 Bacteria 2734
142 nmdc:mga0rr50_166312_c1 3300050513 Bacteria 1793
143 nmdc:mga0rr50_46220_c1 3300050513 Unclassified 3205
144 nmdc:mga0rr50_8393_c1 3300050513 Bacteria 6428
145 nmdc:mga0a205_70750_c1 3300050515 Bacteria 3369
146 Ga0495601_0044105 3300053077 Bacteria 2803
147 Ga0495619_0044865 3300053085 Bacteria 2903
148 Ga0495619_0083233 3300053085 Bacteria 2158
149 Ga0500616_0003917 3300053153 Bacteria 10936
150 Ga0501084_0000084 3300054114 Bacteria 69258
151 Ga0530510_0013241 3300061734 Bacteria 5799
152 Ga0530510_0093193 3300061734 Bacteria 2199

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049741 Ga0501079_0435959 Ga0501079_0435959_90_956 277
2 3300007076 Ga0075435_100016689 Ga0075435_1000166894 278
3 3300048908 Ga0496105_0030110 Ga0496105_0030110_871_1860 278
4 3300050513 nmdc:mga0rr50_8393_c1 nmdc:mga0rr50_8393_c1_4920_5807 278
5 3300048904 Ga0496101_0411175 Ga0496101_0411175_14_886 279
6 3300048917 Ga0496114_0105821 Ga0496114_0105821_444_1352 286
7 3300005843 Ga0068860_100000109 Ga0068860_10000010996 293
8 3300005844 Ga0068862_100006731 Ga0068862_10000673111 293
9 3300028381 Ga0268264_10000002 Ga0268264_10000002647 293
10 3300009147 Ga0114129_10193271 Ga0114129_101932713 295
11 3300025972 Ga0207668_10089195 Ga0207668_100891952 297
12 3300009098 Ga0105245_10392042 Ga0105245_103920422 298
13 3300009176 Ga0105242_10166886 Ga0105242_101668862 298
14 3300025934 Ga0207686_10165731 Ga0207686_101657312 298
15 3300048915 Ga0496112_0016821 Ga0496112_0016821_4792_5775 309
16 3300005458 Ga0070681_10067113 Ga0070681_100671137 310
17 3300005719 Ga0068861_100104618 Ga0068861_1001046184 310
18 3300009094 Ga0111539_10181074 Ga0111539_101810743 310
19 3300009553 Ga0105249_10407675 Ga0105249_104076752 310
20 3300025912 Ga0207707_10369785 Ga0207707_103697852 310
21 3300026075 Ga0207708_10027594 Ga0207708_100275945 310
22 3300031251 Ga0265327_10007518 Ga0265327_100075186 310
23 3300032126 Ga0307415_100272713 Ga0307415_1002727132 310
24 3300046663 Ga0495635_0093520 Ga0495635_0093520_294_1280 310
25 3300046675 Ga0495657_0087677 Ga0495657_0087677_968_1954 310
26 3300048915 Ga0496112_0003039 Ga0496112_0003039_8520_9506 310
27 3300050511 nmdc:mga08y16_125405_c1 nmdc:mga08y16_125405_c1_651_1637 310
28 3300050511 nmdc:mga08y16_395896_c1 nmdc:mga08y16_395896_c1_256_1242 310
29 3300053085 Ga0495619_0044865 Ga0495619_0044865_1666_2652 310
30 3300005437 Ga0070710_10028007 Ga0070710_100280074 311
31 3300005445 Ga0070708_100024563 Ga0070708_1000245635 311
32 3300005467 Ga0070706_100065157 Ga0070706_1000651574 311
33 3300005467 Ga0070706_100258396 Ga0070706_1002583962 311
34 3300005471 Ga0070698_100069816 Ga0070698_1000698163 311
35 3300005471 Ga0070698_100207423 Ga0070698_1002074231 311
36 3300005985 Ga0081539_10038702 Ga0081539_100387024 311
37 3300006028 Ga0070717_10044843 Ga0070717_100448432 311
38 3300006048 Ga0075363_100074979 Ga0075363_1000749793 311
39 3300006847 Ga0075431_100020047 Ga0075431_1000200476 311
40 3300006847 Ga0075431_100111269 Ga0075431_1001112693 311
41 3300006852 Ga0075433_10001314 Ga0075433_1000131416 311
42 3300006871 Ga0075434_100005889 Ga0075434_10000588914 311
43 3300006880 Ga0075429_100050664 Ga0075429_1000506643 311
44 3300009147 Ga0114129_10082258 Ga0114129_100822585 311
45 3300021384 Ga0213876_10054354 Ga0213876_100543542 311
46 3300025910 Ga0207684_10328594 Ga0207684_103285941 311
47 3300028379 Ga0268266_10317327 Ga0268266_103173272 311
48 3300028573 Ga0265334_10038444 Ga0265334_100384442 311
49 3300028800 Ga0265338_10000149 Ga0265338_1000014931 311
50 3300031241 Ga0265325_10001909 Ga0265325_100019093 311
51 3300031249 Ga0265339_10000660 Ga0265339_1000066010 311
52 3300031251 Ga0265327_10002907 Ga0265327_1000290722 311
53 3300031344 Ga0265316_10008603 Ga0265316_100086032 311
54 3300031595 Ga0265313_10000808 Ga0265313_1000080810 311
55 3300031711 Ga0265314_10032240 Ga0265314_100322405 311
56 3300035171 Ga0373946_0037871 Ga0373946_0037871_187_1176 311
57 3300036401 Ga0373937_0534555 Ga0373937_0534555_27_1025 311
58 3300039437 Ga0436365_0054050 Ga0436365_0054050_508_1497 311
59 3300039437 Ga0436365_1671985 Ga0436365_1671985_249_1238 311
60 3300046517 Ga0495630_0090858 Ga0495630_0090858_503_1492 311
61 3300046517 Ga0495630_0151775 Ga0495630_0151775_577_1575 311
62 3300046533 Ga0495640_0004119 Ga0495640_0004119_9562_10551 311
63 3300046559 Ga0495667_0025275 Ga0495667_0025275_767_1756 311
64 3300046689 Ga0495613_0078375 Ga0495613_0078375_355_1365 311
65 3300048904 Ga0496101_0059738 Ga0496101_0059738_393_1391 311
66 3300048905 Ga0496102_0030149 Ga0496102_0030149_1822_2820 311
67 3300048906 Ga0496103_0030954 Ga0496103_0030954_363_1361 311
68 3300048907 Ga0496104_0006616 Ga0496104_0006616_5460_6458 311
69 3300048908 Ga0496105_0007619 Ga0496105_0007619_773_1771 311
70 3300048908 Ga0496105_0129092 Ga0496105_0129092_141_1130 311
71 3300048917 Ga0496114_0012406 Ga0496114_0012406_2607_3605 311
72 3300048918 Ga0496115_0022055 Ga0496115_0022055_2085_3083 311
73 3300049571 Ga0501034_0026188 Ga0501034_0026188_2882_3871 311
74 3300049573 Ga0501037_0095434 Ga0501037_0095434_964_1953 311
75 3300049580 Ga0501046_0011406 Ga0501046_0011406_308_1297 311
76 3300049581 Ga0501047_0059322 Ga0501047_0059322_2462_3451 311
77 3300049586 Ga0501070_0004978 Ga0501070_0004978_7613_8602 311
78 3300049823 Ga0501044_0121299 Ga0501044_0121299_98_1087 311
79 3300050490 nmdc:mga03n38_54464_c1 nmdc:mga03n38_54464_c1_81_1070 311
80 3300050507 nmdc:mga05p37_587609_c1 nmdc:mga05p37_587609_c1_30_1019 311
81 3300050507 nmdc:mga05p37_70397_c1 nmdc:mga05p37_70397_c1_1391_2380 311
82 3300050508 nmdc:mga09592_36190_c1 nmdc:mga09592_36190_c1_1080_2069 311
83 3300050509 nmdc:mga0qj67_82165_c1 nmdc:mga0qj67_82165_c1_304_1293 311
84 3300050510 nmdc:mga06r32_11104_c1 nmdc:mga06r32_11104_c1_3625_4614 311
85 3300050510 nmdc:mga06r32_126893_c1 nmdc:mga06r32_126893_c1_1255_2244 311
86 3300050513 nmdc:mga0rr50_46220_c1 nmdc:mga0rr50_46220_c1_962_1951 311
87 3300050515 nmdc:mga0a205_70750_c1 nmdc:mga0a205_70750_c1_1994_2983 311
88 3300053077 Ga0495601_0044105 Ga0495601_0044105_1011_2009 311
89 3300053085 Ga0495619_0083233 Ga0495619_0083233_600_1598 311
90 3300005548 Ga0070665_100335033 Ga0070665_1003350331 312
91 3300006846 Ga0075430_100026276 Ga0075430_1000262764 312
92 3300028379 Ga0268266_10289709 Ga0268266_102897091 312
93 3300046516 Ga0495628_0080077 Ga0495628_0080077_863_1864 312
94 3300046517 Ga0495630_0013651 Ga0495630_0013651_803_1804 312
95 3300046526 Ga0495666_0082258 Ga0495666_0082258_453_1454 312
96 3300046559 Ga0495667_0057302 Ga0495667_0057302_1022_2023 312
97 3300046683 Ga0495658_0009639 Ga0495658_0009639_1733_2734 312
98 3300047471 Ga0495684_0039522 Ga0495684_0039522_1676_2677 312
99 3300049589 Ga0501073_0150634 Ga0501073_0150634_377_1369 312
100 3300061734 Ga0530510_0013241 Ga0530510_0013241_3539_4531 312
101 3300005440 Ga0070705_100002607 Ga0070705_1000026074 313
102 3300005468 Ga0070707_100367561 Ga0070707_1003675612 313
103 3300005543 Ga0070672_100090399 Ga0070672_1000903992 313
104 3300005546 Ga0070696_100057811 Ga0070696_1000578115 313
105 3300005549 Ga0070704_100042926 Ga0070704_1000429263 313
106 3300006844 Ga0075428_100019880 Ga0075428_1000198805 313
107 3300006847 Ga0075431_100259441 Ga0075431_1002594412 313
108 3300007076 Ga0075435_100193088 Ga0075435_1001930883 313
109 3300009094 Ga0111539_10083075 Ga0111539_100830755 313
110 3300009098 Ga0105245_10003332 Ga0105245_100033328 313
111 3300009148 Ga0105243_10039596 Ga0105243_100395962 313
112 3300009176 Ga0105242_10026223 Ga0105242_100262235 313
113 3300025920 Ga0207649_10286062 Ga0207649_102860621 313
114 3300025934 Ga0207686_10049330 Ga0207686_100493302 313
115 3300025937 Ga0207669_10307934 Ga0207669_103079341 313
116 3300025940 Ga0207691_10025467 Ga0207691_100254672 313
117 3300025944 Ga0207661_10402335 Ga0207661_104023351 313
118 3300025960 Ga0207651_10212005 Ga0207651_102120053 313
119 3300026089 Ga0207648_10466667 Ga0207648_104666671 313
120 3300035398 Ga0316574_0002316 Ga0316574_0002316_183_1196 313
121 3300046461 Ga0495641_0039817 Ga0495641_0039817_121_1140 313
122 3300046517 Ga0495630_0314167 Ga0495630_0314167_145_1140 313
123 3300048905 Ga0496102_0159182 Ga0496102_0159182_1102_2112 313
124 3300048905 Ga0496102_0216395 Ga0496102_0216395_227_1246 313
125 3300048907 Ga0496104_0242997 Ga0496104_0242997_150_1169 313
126 3300048911 Ga0496108_0042740 Ga0496108_0042740_1977_2996 313
127 3300048912 Ga0496109_0031756 Ga0496109_0031756_896_1915 313
128 3300048912 Ga0496109_0055932 Ga0496109_0055932_339_1334 313
129 3300048917 Ga0496114_0059089 Ga0496114_0059089_1064_2083 313
130 3300048917 Ga0496114_0289451 Ga0496114_0289451_246_1265 313
131 3300050509 nmdc:mga0qj67_278598_c1 nmdc:mga0qj67_278598_c1_203_1213 313
132 3300050511 nmdc:mga08y16_65993_c1 nmdc:mga08y16_65993_c1_2718_3728 313
133 3300050512 nmdc:mga0n895_112906_c1 nmdc:mga0n895_112906_c1_1311_2315 313
134 3300050513 nmdc:mga0rr50_166312_c1 nmdc:mga0rr50_166312_c1_767_1771 313
135 3300053153 Ga0500616_0003917 Ga0500616_0003917_3609_4628 313
136 3300054114 Ga0501084_0000084 Ga0501084_0000084_55993_57024 313
137 3300061734 Ga0530510_0093193 Ga0530510_0093193_384_1379 313
138 3300005347 Ga0070668_100000878 Ga0070668_10000087822 314
139 3300005347 Ga0070668_100001422 Ga0070668_1000014226 314
140 3300005367 Ga0070667_100002297 Ga0070667_1000022975 314
141 3300005367 Ga0070667_100263766 Ga0070667_1002637661 314
142 3300005617 Ga0068859_100002155 Ga0068859_10000215510 314
143 3300005618 Ga0068864_100085518 Ga0068864_1000855182 314
144 3300005841 Ga0068863_100036566 Ga0068863_1000365664 314
145 3300005842 Ga0068858_100109631 Ga0068858_1001096312 314
146 3300005844 Ga0068862_100017117 Ga0068862_1000171175 314
147 3300006931 Ga0097620_100002155 Ga0097620_10000215510 314
148 3300025925 Ga0207650_10018450 Ga0207650_100184504 314
149 3300025972 Ga0207668_10005257 Ga0207668_100052573 314
150 3300026035 Ga0207703_10049870 Ga0207703_100498702 314
151 3300026088 Ga0207641_10014767 Ga0207641_100147675 314
152 3300039437 Ga0436365_1702191 Ga0436365_1702191_95493_96437 314

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

30

331

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l0z-assembly1.cif.gz_B crystal structure of adomet bound rrna methyltransferase from sinorhizobium meliloti 0.8816 2 36
7qiu-assembly1.cif.gz_B ysga 23s rna methyltransferase from bacillus subtilis 0.8814 2 37
3c8n-assembly2.cif.gz_D crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.8424 1 313
3c8n-assembly2.cif.gz_C crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.8391 1 313
3c8n-assembly2.cif.gz_D crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.8378 1 313
ID Description Score Start End Superfamily
5l0zB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8816 2 36 3.40.1280.10
af_P71701_5_258_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8699 2 304 3.20.20.30
af_Q8IJ98_34_227_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8493 1 37 3.40.1280.10
af_P71701_5_258_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8341 2 304 3.20.20.30
af_P95159_1_299_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.832 1 307 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A3D1SPQ4-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9441 34 191 GO:0008726
GO:0046306
AF-A0A838UV13-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9398 72 174 GO:0008726
GO:0046306
AF-A0A7K0U661-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.937 1 146 GO:0008726
GO:0046306
AF-A0A7W1C6G0-F1-model_v4 TIGR03560 family F420-dependent LLM class oxidoreductase 0.9269 25 226 GO:0008726
GO:0046306
AF-A0A3D1STB4-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9209 1 238 GO:0008726
GO:0046306

Feature Viewer

pLDDT pTM Quality
88.28 0.88 High
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Predicted Structure (AlphaFold2)

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