F213671

General Info

Members Datasets Scaffolds Average Seq Length
152 121 304 402

Family's Representative Sequence

Representative Sequence 3300005456|Ga0070678_100055695|Ga0070678_1000556951
Length 461
Sequence LLVVAMPTSPSYWVEEERENAMAKVIIGVDPHKLSATIEVVDRRERLLGSGRFSTDQAGYTAMRTFAKAWPERVWAVEGSNGAGRPLAQRLLEAGEHVVDVPAKLAARVRLFDTGHNRKTDARDAHSIAVVAVRTRTLRVLAADGELEGLRMLCDRREELTRLRVQTVNRLQRLLAELIPGQGQKDLTALQAKAILATVRPRDIAGKTRRRIAVEELADLVAVEAKMKKATAELKTIVLARGSRLMDIHGVGPVVAARILADVGDITRFADRNRFASWTGTAPLDASSGEQNRHRLSRAGNRRMNHMLHIAAVTQIRLDTEGRAYYSRKRAAGKKPLEAMRCLKRRLSDVVYRQLVADAERAAMTASSGEAGTGPGGHCGATQESSAVDLPPHIDTSDQPLPGPAHPTLPATKPHANPCAASAPRRSRRRAGAVKVERPTGRTTLTAPSAGAHSAAPKPTS

Samples

Sample ID Description Type Environment
1 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
44 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
45 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
50 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
51 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
52 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
53 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
54 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
55 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
56 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
57 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
58 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
71 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
75 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
84 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
88 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
89 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
97 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
98 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
99 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
104 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
105 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
106 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
107 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
108 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
109 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
110 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
111 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
112 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
113 2643221615 Nocardioides sp. Root224 Isolate Unclassified
114 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
115 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
116 2643221711 Terrabacter sp. Root85 Isolate Unclassified
117 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
118 2738541305 Nocardioides sp. CF167 Isolate Unclassified
119 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
120 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
121 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.45
Metatranscriptomes 1.32
Isolates 7.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.21
Nodule 0
Rhizoplane 5.92
Rhizosphere 76.97
Stem 0
Stem Tuber 0
Unclassified 2.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070678_100055695 3300005456 Bacteria 2888
2 LJQas_1003794 3300000549 Bacteria 2000
3 Ga0070658_10022197 3300005327 Bacteria 5093
4 Ga0070658_10165639 3300005327 Bacteria 1856
5 Ga0070683_100121574 3300005329 Bacteria 2467
6 Ga0070670_100275096 3300005331 Bacteria 1470
7 Ga0070680_100098569 3300005336 Bacteria 2424
8 Ga0070714_100039600 3300005435 Bacteria 3968
9 Ga0070681_10000020 3300005458 Bacteria 123918
10 Ga0070681_10004562 3300005458 Bacteria 13212
11 Ga0070679_100000044 3300005530 Bacteria 94029
12 Ga0070679_100004251 3300005530 Bacteria 13213
13 Ga0070693_100106571 3300005547 Bacteria 1716
14 Ga0068857_100323230 3300005577 Bacteria 1425
15 Ga0070702_100067486 3300005615 Bacteria 2101
16 Ga0075365_10098197 3300006038 Bacteria 2003
17 Ga0075363_100022917 3300006048 Bacteria 3161
18 Ga0075364_10128974 3300006051 Bacteria 1697
19 Ga0075364_10150456 3300006051 Bacteria 1569
20 Ga0075370_10029410 3300006353 Bacteria 3061
21 Ga0075370_10086763 3300006353 Bacteria 1803
22 Ga0075428_100317689 3300006844 Bacteria 1674
23 Ga0111539_10247733 3300009094 Bacteria 2074
24 Ga0105243_10164089 3300009148 Bacteria 1918
25 Ga0105242_10230264 3300009176 Bacteria 1660
26 Ga0105238_10198291 3300009551 Bacteria 1983
27 Ga0105249_10158063 3300009553 Bacteria 2188
28 Ga0105239_10022253 3300010375 Bacteria 6987
29 Ga0105239_10040889 3300010375 Bacteria 5081
30 Ga0157369_10014042 3300013105 Bacteria 9048
31 Ga0157378_10206774 3300013297 Bacteria 1859
32 Ga0163162_10087472 3300013306 Bacteria 3195
33 Ga0163162_10394025 3300013306 Bacteria 1517
34 Ga0157372_10347225 3300013307 Bacteria 1729
35 Ga0157372_10349136 3300013307 Bacteria 1723
36 Ga0157375_10289604 3300013308 Bacteria 1801
37 Ga0157380_10153333 3300014326 Bacteria 1994
38 Ga0157379_10196093 3300014968 Bacteria 1825
39 Ga0206353_10281014 3300020082 Bacteria 1525
40 Ga0206353_11348477 3300020082 Bacteria 1325
41 Ga0207705_10001591 3300025909 Bacteria 18027
42 Ga0207707_10000090 3300025912 Bacteria 90918
43 Ga0207707_10003907 3300025912 Bacteria 13219
44 Ga0207660_10000333 3300025917 Bacteria 30375
45 Ga0207660_10022277 3300025917 Bacteria 4268
46 Ga0207657_10092750 3300025919 Bacteria 2516
47 Ga0207652_10000218 3300025921 Bacteria 60676
48 Ga0207652_10003363 3300025921 Bacteria 13210
49 Ga0207694_10137019 3300025924 Bacteria 1967
50 Ga0207664_10127703 3300025929 Bacteria 2136
51 Ga0207709_10120886 3300025935 Bacteria 1768
52 Ga0207691_10143486 3300025940 Bacteria 2103
53 Ga0207648_10048926 3300026089 Bacteria 3701
54 Ga0207683_10217687 3300026121 Bacteria 1739
55 Ga0207683_10360748 3300026121 Bacteria 1335
56 Ga0316579_10094038 3300031691 Bacteria 1432
57 Ga0316576_10207518 3300031727 Bacteria 1475
58 Ga0316578_10125946 3300031728 Bacteria 1540
59 Ga0307409_100327919 3300031995 Bacteria 1435
60 Ga0307416_100066359 3300032002 Bacteria 2971
61 Ga0307415_100198270 3300032126 Bacteria 1590
62 Ga0316583_10016705 3300032133 Bacteria 2640
63 Ga0316583_10035023 3300032133 Bacteria 1782
64 Ga0316585_10032944 3300032137 Bacteria 1633
65 Ga0373934_0001129 3300035086 Bacteria 9704
66 Ga0373945_0041448 3300035116 Bacteria 1664
67 Ga0373953_0000206 3300035117 Bacteria 15873
68 Ga0373954_0006149 3300035118 Bacteria 5229
69 Ga0373956_0009784 3300035119 Bacteria 3905
70 Ga0373957_0000949 3300035120 Bacteria 7606
71 Ga0373943_0022740 3300035170 Bacteria 2909
72 Ga0373955_0088147 3300035172 Bacteria 1764
73 Ga0316574_0051866 3300035398 Bacteria 2557
74 Ga0373924_0002955 3300035410 Bacteria 5774
75 Ga0373935_0038290 3300035692 Bacteria 3002
76 Ga0373933_0156489 3300035724 Bacteria 1445
77 Ga0373947_0187881 3300035725 Bacteria 1347
78 Ga0373937_0329259 3300036401 Bacteria 1445
79 Ga0316584_0075327 3300036712 Bacteria 2529
80 Ga0316584_0115103 3300036712 Bacteria 2011
81 Ga0316584_0144240 3300036712 Bacteria 1774
82 Ga0316584_0182306 3300036712 Bacteria 1554
83 Ga0316584_0192892 3300036712 Bacteria 1505
84 Ga0395899_0123358 3300037312 Bacteria 1854
85 Ga0395901_0311092 3300038443 Bacteria 1631
86 Ga0451853_2558743 3300041512 Bacteria 2019
87 Ga0466965_0085623 3300044683 Bacteria 1598
88 Ga0466970_0016888 3300044765 Bacteria 3768
89 Ga0466957_0130569 3300044842 Bacteria 1609
90 Ga0466967_0283730 3300045976 Bacteria 1589
91 Ga0495592_0035759 3300046454 Bacteria 3742
92 Ga0495603_0110806 3300046455 Bacteria 1601
93 Ga0495651_0134055 3300046462 Bacteria 1805
94 Ga0495651_0190121 3300046462 Bacteria 1445
95 Ga0495653_0131791 3300046463 Bacteria 1768
96 Ga0495664_0123772 3300046477 Unclassified 1564
97 Ga0495608_0157379 3300046511 Bacteria 1445
98 Ga0495628_0149524 3300046516 Bacteria 1779
99 Ga0495630_0219106 3300046517 Unclassified 1453
100 Ga0495652_0000574 3300046529 Bacteria 42953
101 Ga0495587_0024669 3300046536 Bacteria 3682
102 Ga0495667_0007064 3300046559 Bacteria 7619
103 Ga0495667_0118072 3300046559 Bacteria 1713
104 Ga0495635_0056610 3300046663 Bacteria 2699
105 Ga0495635_0120193 3300046663 Bacteria 1792
106 Ga0495657_0005879 3300046675 Bacteria 9647
107 Ga0495599_0000657 3300046678 Bacteria 19551
108 Ga0495623_0026263 3300046679 Bacteria 3749
109 Ga0495646_0003185 3300046680 Bacteria 10194
110 Ga0495613_0137984 3300046689 Bacteria 1744
111 Ga0495600_0025552 3300046809 Bacteria 3806
112 Ga0495581_0089959 3300047315 Bacteria 1780
113 Ga0495604_0000149 3300047317 Bacteria 60591
114 Ga0495680_0197292 3300047322 Bacteria 1445
115 Ga0495675_0006244 3300047444 Bacteria 7289
116 Ga0495684_0118985 3300047471 Bacteria 1990
117 Ga0495602_0217271 3300048088 Bacteria 1445
118 Ga0496105_0013842 3300048908 Bacteria 6407
119 Ga0496105_0086018 3300048908 Bacteria 2598
120 Ga0496105_0250993 3300048908 Bacteria 1433
121 Ga0496108_0295330 3300048911 Bacteria 1411
122 Ga0496109_0266822 3300048912 Bacteria 1613
123 Ga0496110_0067481 3300048913 Bacteria 3165
124 Ga0496114_0139709 3300048917 Bacteria 2096
125 Ga0496114_0262217 3300048917 Bacteria 1521
126 Ga0496114_0278132 3300048917 Bacteria 1475
127 Ga0501070_0249917 3300049586 Bacteria 1451
128 nmdc:mga03n38_75093_c1 3300050490 Bacteria 1574
129 nmdc:mga00v17_24327_c1 3300050491 Bacteria 3512
130 nmdc:mga0yw44_93052_c1 3300050492 Bacteria 1908
131 nmdc:mga07m45_6473_c1 3300050496 Bacteria 5922
132 nmdc:mga07m45_95395_c1 3300050496 Bacteria 1706
133 Ga0495601_0072848 3300053077 Bacteria 2195
134 Ga0495601_0090252 3300053077 Unclassified 1971
135 Ga0495612_0065471 3300053078 Unclassified 1509
136 Ga0495595_0017239 3300053084 Bacteria 3106
137 Ga0495619_0036324 3300053085 Bacteria 3208
138 Ga0495619_0102983 3300053085 Bacteria 1944
139 Ga0500593_000144 3300053117 Bacteria 28637
140 Ga0500593_000269 3300053117 Bacteria 21218
141 Ga0500636_0083625 3300053177 Bacteria 1836
142 2644092577 2643221615 Bacteria 5487866
143 2644136715 2643221624 Bacteria 4384879
144 2644323163 2643221657 Bacteria 5490246
145 2644609701 2643221711 Bacteria 4865335
146 2645719456 2643221961 Bacteria 3919167
147 2738871945 2738541305 Bacteria 4910150
148 2809196790 2808606439 Bacteria 5952208
149 2809196793 2808606439 Bacteria 5952208
150 2809197385 2808606439 Bacteria 5952208
151 2812372487 2811994882 Bacteria 4688362
152 2819425656 2818991318 Bacteria 5266538
153 Ga0070678_100055695
154 LJQas_1003794
155 Ga0070658_10022197
156 Ga0070658_10165639
157 Ga0070683_100121574
158 Ga0070670_100275096
159 Ga0070680_100098569
160 Ga0070714_100039600
161 Ga0070681_10000020
162 Ga0070681_10004562
163 Ga0070679_100000044
164 Ga0070679_100004251
165 Ga0070693_100106571
166 Ga0068857_100323230
167 Ga0070702_100067486
168 Ga0075365_10098197
169 Ga0075363_100022917
170 Ga0075364_10128974
171 Ga0075364_10150456
172 Ga0075370_10029410
173 Ga0075370_10086763
174 Ga0075428_100317689
175 Ga0111539_10247733
176 Ga0105243_10164089
177 Ga0105242_10230264
178 Ga0105238_10198291
179 Ga0105249_10158063
180 Ga0105239_10022253
181 Ga0105239_10040889
182 Ga0157369_10014042
183 Ga0157378_10206774
184 Ga0163162_10087472
185 Ga0163162_10394025
186 Ga0157372_10347225
187 Ga0157372_10349136
188 Ga0157375_10289604
189 Ga0157380_10153333
190 Ga0157379_10196093
191 Ga0206353_10281014
192 Ga0206353_11348477
193 Ga0207705_10001591
194 Ga0207707_10000090
195 Ga0207707_10003907
196 Ga0207660_10000333
197 Ga0207660_10022277
198 Ga0207657_10092750
199 Ga0207652_10000218
200 Ga0207652_10003363
201 Ga0207694_10137019
202 Ga0207664_10127703
203 Ga0207709_10120886
204 Ga0207691_10143486
205 Ga0207648_10048926
206 Ga0207683_10217687
207 Ga0207683_10360748
208 Ga0316579_10094038
209 Ga0316576_10207518
210 Ga0316578_10125946
211 Ga0307409_100327919
212 Ga0307416_100066359
213 Ga0307415_100198270
214 Ga0316583_10016705
215 Ga0316583_10035023
216 Ga0316585_10032944
217 Ga0373934_0001129
218 Ga0373945_0041448
219 Ga0373953_0000206
220 Ga0373954_0006149
221 Ga0373956_0009784
222 Ga0373957_0000949
223 Ga0373943_0022740
224 Ga0373955_0088147
225 Ga0316574_0051866
226 Ga0373924_0002955
227 Ga0373935_0038290
228 Ga0373933_0156489
229 Ga0373947_0187881
230 Ga0373937_0329259
231 Ga0316584_0075327
232 Ga0316584_0115103
233 Ga0316584_0144240
234 Ga0316584_0182306
235 Ga0316584_0192892
236 Ga0395899_0123358
237 Ga0395901_0311092
238 Ga0451853_2558743
239 Ga0466965_0085623
240 Ga0466970_0016888
241 Ga0466957_0130569
242 Ga0466967_0283730
243 Ga0495592_0035759
244 Ga0495603_0110806
245 Ga0495651_0134055
246 Ga0495651_0190121
247 Ga0495653_0131791
248 Ga0495664_0123772
249 Ga0495608_0157379
250 Ga0495628_0149524
251 Ga0495630_0219106
252 Ga0495652_0000574
253 Ga0495587_0024669
254 Ga0495667_0007064
255 Ga0495667_0118072
256 Ga0495635_0056610
257 Ga0495635_0120193
258 Ga0495657_0005879
259 Ga0495599_0000657
260 Ga0495623_0026263
261 Ga0495646_0003185
262 Ga0495613_0137984
263 Ga0495600_0025552
264 Ga0495581_0089959
265 Ga0495604_0000149
266 Ga0495680_0197292
267 Ga0495675_0006244
268 Ga0495684_0118985
269 Ga0495602_0217271
270 Ga0496105_0013842
271 Ga0496105_0086018
272 Ga0496105_0250993
273 Ga0496108_0295330
274 Ga0496109_0266822
275 Ga0496110_0067481
276 Ga0496114_0139709
277 Ga0496114_0262217
278 Ga0496114_0278132
279 Ga0501070_0249917
280 nmdc:mga03n38_75093_c1
281 nmdc:mga00v17_24327_c1
282 nmdc:mga0yw44_93052_c1
283 nmdc:mga07m45_6473_c1
284 nmdc:mga07m45_95395_c1
285 Ga0495601_0072848
286 Ga0495601_0090252
287 Ga0495612_0065471
288 Ga0495595_0017239
289 Ga0495619_0036324
290 Ga0495619_0102983
291 Ga0500593_000144
292 Ga0500593_000269
293 Ga0500636_0083625
294 2644092577
295 2644136715
296 2644323163
297 2644609701
298 2645719456
299 2738871945
300 2809196790
301 2809196793
302 2809197385
303 2812372487
304 2819425656

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02371

Transposase_20

Transposase IS116/IS110/IS902 family

242

327

0.97

PF01548

DEDD_Tnp_IS110

Transposase

27

180

0.94

Map