F213648

General Info

Members Datasets Scaffolds Average Seq Length
152 99 304 799

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100001171|Ga0070708_10000117110
Length 841
Sequence MAGRDVLLPEGVFSVHNQILAALVVLLILPGLTGLRAGVGARDGLFTAAAKAQGSQSRTVLFDGDWRFHRGGAQRAEELDFNDSNWRKLDLPHDWSIEELPSTDSPFNPDAISQVSGGFTTGGTGWYRKTFTVPNEQKGKRILIQFDGVYMNADVWLNSQWLGNHPYGYTSFWFDLTEKVRFGRSNVLAVKVKNEGENSRWYSGSGIYRHVWLKTLELTHVAQWGTYITTPVVSASSATVNARTKVLNESDQPAQITLVTKIVDGTGRETARVDSTQTIEAKAAYEFNQHAIIKFPALWSPDAPALYTAVSEVYRDQQSNDRVETRFGIRMLSFDAVNGFLLNGKPLKLKGGCLHHDNGPLGARAFDRAEERRVELLKASGYNALRLAHNPPSPAFLDACDRLGLMVIDEAFDMWREGKNPHDYHLYFDEWWQKDIESMVARDRNHPAIIMWSIGNEIPNRDKPEVVKLAQVLGDYVRRLEPTRPVTSAVNDLREDKDPYFATLDVAGYNYAAGGDHMKKSLYEFDHNRLPSRIMFGSESYPLEAFASWMNVLDHPYVIGDFVWTAFDYIGEASIGWRGYWQEQNFYPWNLAYCGDIDVCGWKRPQSYYRDALWKNDQVSIFVRPPRPSFEPNPKRQSWSKWHWFDVVGNWNWEGDENKPLEVNVYSSCEEVELFLKGRSLGKKPTNRSTAFIATWVVPYQAGVLKAIGYDAGKTVNSFELSSAEQPKRIKLTADRTRMAADGQDLSYITVELVDGHGVRNPKAENLIKFILTGPGHIVGVGNANPVSTESYQRPQRKAWQGRCLLIVKSDKQAGQITVRASAEGLAPAEIVIDALKLPRS

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
56 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
57 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
94 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
95 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
96 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
97 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
98 2818991444 Filimonas endophytica 3197 Isolate Unclassified
99 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0
Isolates 1.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.58
Nodule 0
Rhizoplane 0.66
Rhizosphere 84.87
Stem 0
Stem Tuber 0
Unclassified 5.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100001171 3300005445 Bacteria 20210
2 JGI25162J39368_1000342 3300002737 Bacteria 40311
3 JGI25165J46597_1000522 3300003214 Bacteria 36077
4 rootL2_10169323 3300003322 Unclassified 3579
5 rootL2_10178418 3300003322 Bacteria 8918
6 rootH1_10006938 3300003323 Bacteria 9602
7 rootH1_10006939 3300003323 Bacteria 26814
8 Ga0070683_100036194 3300005329 Bacteria 4516
9 Ga0070690_100047802 3300005330 Bacteria 2723
10 Ga0070670_100035048 3300005331 Unclassified 4320
11 Ga0070670_100053733 3300005331 Bacteria 3459
12 Ga0068869_100042927 3300005334 Bacteria 3245
13 Ga0070666_10017352 3300005335 Bacteria 4614
14 Ga0070680_100000625 3300005336 Bacteria 24590
15 Ga0070680_100001907 3300005336 Bacteria 15307
16 Ga0070680_100065391 3300005336 Bacteria 2980
17 Ga0070682_100002718 3300005337 Bacteria 9794
18 Ga0070660_100000268 3300005339 Bacteria 34613
19 Ga0070671_100002163 3300005355 Bacteria 15164
20 Ga0070705_100023981 3300005440 Bacteria 3286
21 Ga0070662_100005236 3300005457 Bacteria 8275
22 Ga0070662_100069324 3300005457 Bacteria 2595
23 Ga0070681_10000142 3300005458 Bacteria 54817
24 Ga0068867_100018308 3300005459 Bacteria 4979
25 Ga0070707_100009549 3300005468 Bacteria 9011
26 Ga0070698_100003400 3300005471 Bacteria 17500
27 Ga0070698_100094678 3300005471 Bacteria 2965
28 Ga0070699_100003371 3300005518 Bacteria 14136
29 Ga0070679_100000024 3300005530 Bacteria 121394
30 Ga0070679_100000113 3300005530 Bacteria 63640
31 Ga0070679_100003616 3300005530 Bacteria 14130
32 Ga0068853_100039453 3300005539 Unclassified 4027
33 Ga0070686_100013116 3300005544 Bacteria 4732
34 Ga0070693_100002884 3300005547 Bacteria 7930
35 Ga0068855_100013198 3300005563 Bacteria 9966
36 Ga0068855_100020365 3300005563 Bacteria 7957
37 Ga0068855_100038743 3300005563 Bacteria 5662
38 Ga0070702_100013677 3300005615 Bacteria 4103
39 Ga0068852_100014440 3300005616 Bacteria 6082
40 Ga0068859_100093951 3300005617 Unclassified 3051
41 Ga0068864_100003197 3300005618 Bacteria 13534
42 Ga0068864_100053107 3300005618 Unclassified 3495
43 Ga0068864_100057296 3300005618 Bacteria 3366
44 Ga0068870_10024605 3300005840 Bacteria 2981
45 Ga0068858_100019688 3300005842 Bacteria 6310
46 Ga0068860_100006951 3300005843 Bacteria 11341
47 Ga0081539_10001739 3300005985 Bacteria 34792
48 Ga0097621_100001470 3300006237 Bacteria 16123
49 Ga0097621_100010202 3300006237 Bacteria 6859
50 Ga0075428_100003887 3300006844 Bacteria 16417
51 Ga0075431_100006853 3300006847 Bacteria 11320
52 Ga0075431_100032217 3300006847 Bacteria 5401
53 Ga0075434_100091791 3300006871 Bacteria 3038
54 Ga0097620_100093944 3300006931 Unclassified 3051
55 Ga0105240_10008553 3300009093 Bacteria 14626
56 Ga0114129_10033385 3300009147 Bacteria 7272
57 Ga0105241_10000972 3300009174 Bacteria 21714
58 Ga0105241_10021515 3300009174 Bacteria 4768
59 Ga0105248_10073093 3300009177 Bacteria 3854
60 Ga0105239_10117290 3300010375 Bacteria 2954
61 Ga0157373_10003933 3300013100 Bacteria 11221
62 Ga0157373_10043845 3300013100 Bacteria 3194
63 Ga0157371_10012432 3300013102 Bacteria 6506
64 Ga0157371_10012857 3300013102 Bacteria 6373
65 Ga0157371_10034989 3300013102 Bacteria 3601
66 Ga0157370_10007770 3300013104 Bacteria 11623
67 Ga0157370_10015321 3300013104 Bacteria 7798
68 Ga0157370_10044336 3300013104 Bacteria 4276
69 Ga0157378_10001707 3300013297 Bacteria 19756
70 Ga0163162_10000024 3300013306 Bacteria 188515
71 Ga0163162_10001063 3300013306 Bacteria 25504
72 Ga0163162_10001547 3300013306 Bacteria 21476
73 Ga0163162_10002767 3300013306 Bacteria 16650
74 Ga0163162_10049552 3300013306 Bacteria 4210
75 Ga0163162_10057027 3300013306 Bacteria 3934
76 Ga0157372_10009938 3300013307 Bacteria 10120
77 Ga0157375_10013263 3300013308 Bacteria 7329
78 Ga0157375_10025604 3300013308 Bacteria 5486
79 Ga0157375_10082719 3300013308 Bacteria 3253
80 Ga0163163_10002956 3300014325 Bacteria 14373
81 Ga0163163_10003248 3300014325 Bacteria 13786
82 Ga0163163_10025816 3300014325 Bacteria 5604
83 Ga0163163_10070028 3300014325 Bacteria 3493
84 Ga0163163_10075928 3300014325 Unclassified 3354
85 Ga0157379_10019306 3300014968 Bacteria 6019
86 Ga0157379_10057567 3300014968 Bacteria 3474
87 Ga0213876_10000057 3300021384 Bacteria 134631
88 Ga0213876_10000172 3300021384 Bacteria 67291
89 Ga0207427_100208 3300025231 Bacteria 53345
90 Ga0209437_100052 3300025233 Bacteria 380548
91 Ga0209258_100151 3300025242 Bacteria 160444
92 Ga0209148_1000154 3300025254 Bacteria 145214
93 Ga0209233_1000067 3300025261 Bacteria 380554
94 Ga0207705_10038612 3300025909 Bacteria 3419
95 Ga0207707_10000003 3300025912 Bacteria 642592
96 Ga0207707_10002552 3300025912 Bacteria 16324
97 Ga0207671_10010206 3300025914 Bacteria 7775
98 Ga0207660_10002356 3300025917 Bacteria 12444
99 Ga0207657_10002015 3300025919 Bacteria 21959
100 Ga0207657_10021017 3300025919 Bacteria 6153
101 Ga0207657_10021818 3300025919 Bacteria 6016
102 Ga0207657_10077540 3300025919 Bacteria 2800
103 Ga0207652_10000018 3300025921 Bacteria 187527
104 Ga0207652_10000045 3300025921 Bacteria 125343
105 Ga0207652_10000113 3300025921 Bacteria 88253
106 Ga0207652_10003407 3300025921 Bacteria 13130
107 Ga0207670_10008136 3300025936 Bacteria 5901
108 Ga0207689_10003084 3300025942 Bacteria 15335
109 Ga0207689_10018254 3300025942 Bacteria 5920
110 Ga0207689_10035916 3300025942 Bacteria 4114
111 Ga0207661_10014937 3300025944 Bacteria 5701
112 Ga0207679_10052997 3300025945 Bacteria 2978
113 Ga0207667_10002039 3300025949 Bacteria 25321
114 Ga0207667_10052535 3300025949 Bacteria 4291
115 Ga0207648_10014588 3300026089 Bacteria 7257
116 Ga0207648_10058123 3300026089 Bacteria 3373
117 Ga0207676_10050819 3300026095 Bacteria 3234
118 Ga0207674_10015648 3300026116 Bacteria 8330
119 Ga0207675_100023783 3300026118 Bacteria 5701
120 Ga0265316_10063162 3300031344 Bacteria 2872
121 Ga0395899_0027748 3300037312 Bacteria 4266
122 Ga0395900_0015476 3300037418 Bacteria 7776
123 Ga0395900_0062487 3300037418 Bacteria 3828
124 Ga0395900_0068044 3300037418 Bacteria 3659
125 Ga0395898_0008232 3300037466 Bacteria 11023
126 Ga0395898_0063663 3300037466 Unclassified 3578
127 Ga0436365_1041616 3300039437 Bacteria 111595
128 Ga0436365_1653501 3300039437 Bacteria 4497
129 Ga0436365_1928925 3300039437 Bacteria 149126
130 Ga0451577_0010423 3300042876 Bacteria 8891
131 Ga0466972_0000006 3300044658 Bacteria 282264
132 Ga0453684_0002365 3300044712 Bacteria 46102
133 Ga0453684_0015298 3300044712 Bacteria 12162
134 Ga0453684_0025965 3300044712 Bacteria 8483
135 Ga0453684_0031120 3300044712 Bacteria 7510
136 Ga0466970_0002370 3300044765 Bacteria 9102
137 Ga0451576_0013613 3300045051 Bacteria 9092
138 Ga0495608_0056153 3300046511 Bacteria 2601
139 Ga0495680_0044163 3300047322 Bacteria 3525
140 Ga0496112_0083796 3300048915 Bacteria 3154
141 Ga0496124_0023826 3300048927 Bacteria 5579
142 Ga0501034_0037805 3300049571 Bacteria 4889
143 Ga0501070_0046419 3300049586 Bacteria 3612
144 Ga0501083_0023913 3300049744 Bacteria 4236
145 Ga0501044_0086674 3300049823 Bacteria 3163
146 nmdc:mga0a205_2185_c1 3300050515 Bacteria 17222
147 Ga0500644_0000133 3300053088 Bacteria 45875
148 Ga0500569_005297 3300053109 Bacteria 2764
149 Ga0500577_0001185 3300053142 Bacteria 6668
150 Ga0501084_0034883 3300054114 Bacteria 4207
151 2819590546 2818991444 Bacteria 6968812
152 2929241218 2929239360 Bacteria 7745570
153 Ga0070708_100001171
154 JGI25162J39368_1000342
155 JGI25165J46597_1000522
156 rootL2_10169323
157 rootL2_10178418
158 rootH1_10006938
159 rootH1_10006939
160 Ga0070683_100036194
161 Ga0070690_100047802
162 Ga0070670_100035048
163 Ga0070670_100053733
164 Ga0068869_100042927
165 Ga0070666_10017352
166 Ga0070680_100000625
167 Ga0070680_100001907
168 Ga0070680_100065391
169 Ga0070682_100002718
170 Ga0070660_100000268
171 Ga0070671_100002163
172 Ga0070705_100023981
173 Ga0070662_100005236
174 Ga0070662_100069324
175 Ga0070681_10000142
176 Ga0068867_100018308
177 Ga0070707_100009549
178 Ga0070698_100003400
179 Ga0070698_100094678
180 Ga0070699_100003371
181 Ga0070679_100000024
182 Ga0070679_100000113
183 Ga0070679_100003616
184 Ga0068853_100039453
185 Ga0070686_100013116
186 Ga0070693_100002884
187 Ga0068855_100013198
188 Ga0068855_100020365
189 Ga0068855_100038743
190 Ga0070702_100013677
191 Ga0068852_100014440
192 Ga0068859_100093951
193 Ga0068864_100003197
194 Ga0068864_100053107
195 Ga0068864_100057296
196 Ga0068870_10024605
197 Ga0068858_100019688
198 Ga0068860_100006951
199 Ga0081539_10001739
200 Ga0097621_100001470
201 Ga0097621_100010202
202 Ga0075428_100003887
203 Ga0075431_100006853
204 Ga0075431_100032217
205 Ga0075434_100091791
206 Ga0097620_100093944
207 Ga0105240_10008553
208 Ga0114129_10033385
209 Ga0105241_10000972
210 Ga0105241_10021515
211 Ga0105248_10073093
212 Ga0105239_10117290
213 Ga0157373_10003933
214 Ga0157373_10043845
215 Ga0157371_10012432
216 Ga0157371_10012857
217 Ga0157371_10034989
218 Ga0157370_10007770
219 Ga0157370_10015321
220 Ga0157370_10044336
221 Ga0157378_10001707
222 Ga0163162_10000024
223 Ga0163162_10001063
224 Ga0163162_10001547
225 Ga0163162_10002767
226 Ga0163162_10049552
227 Ga0163162_10057027
228 Ga0157372_10009938
229 Ga0157375_10013263
230 Ga0157375_10025604
231 Ga0157375_10082719
232 Ga0163163_10002956
233 Ga0163163_10003248
234 Ga0163163_10025816
235 Ga0163163_10070028
236 Ga0163163_10075928
237 Ga0157379_10019306
238 Ga0157379_10057567
239 Ga0213876_10000057
240 Ga0213876_10000172
241 Ga0207427_100208
242 Ga0209437_100052
243 Ga0209258_100151
244 Ga0209148_1000154
245 Ga0209233_1000067
246 Ga0207705_10038612
247 Ga0207707_10000003
248 Ga0207707_10002552
249 Ga0207671_10010206
250 Ga0207660_10002356
251 Ga0207657_10002015
252 Ga0207657_10021017
253 Ga0207657_10021818
254 Ga0207657_10077540
255 Ga0207652_10000018
256 Ga0207652_10000045
257 Ga0207652_10000113
258 Ga0207652_10003407
259 Ga0207670_10008136
260 Ga0207689_10003084
261 Ga0207689_10018254
262 Ga0207689_10035916
263 Ga0207661_10014937
264 Ga0207679_10052997
265 Ga0207667_10002039
266 Ga0207667_10052535
267 Ga0207648_10014588
268 Ga0207648_10058123
269 Ga0207676_10050819
270 Ga0207674_10015648
271 Ga0207675_100023783
272 Ga0265316_10063162
273 Ga0395899_0027748
274 Ga0395900_0015476
275 Ga0395900_0062487
276 Ga0395900_0068044
277 Ga0395898_0008232
278 Ga0395898_0063663
279 Ga0436365_1041616
280 Ga0436365_1653501
281 Ga0436365_1928925
282 Ga0451577_0010423
283 Ga0466972_0000006
284 Ga0453684_0002365
285 Ga0453684_0015298
286 Ga0453684_0025965
287 Ga0453684_0031120
288 Ga0466970_0002370
289 Ga0451576_0013613
290 Ga0495608_0056153
291 Ga0495680_0044163
292 Ga0496112_0083796
293 Ga0496124_0023826
294 Ga0501034_0037805
295 Ga0501070_0046419
296 Ga0501083_0023913
297 Ga0501044_0086674
298 nmdc:mga0a205_2185_c1
299 Ga0500644_0000133
300 Ga0500569_005297
301 Ga0500577_0001185
302 Ga0501084_0034883
303 2819590546
304 2929241218

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18565

Glyco_hydro2_C5

Glycoside hydrolase family 2 C-terminal domain 5

730

832

0.99

PF16355

DUF4982

Domain of unknown function (DUF4982)

658

717

0.96

PF22666

Glyco_hydro_2_N2

Glycosyl hydrolase 2 galactose-binding domain-like

114

212

0.91

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

219

330

0.85

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

60

217

0.82

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

336

532

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b6l-assembly2.cif.gz_B the crystal structure of glycosyl hydrolase family 2 (gh2) member from bacteroides cellulosilyticus dsm 14838 0.9651 24 794
6b6l-assembly2.cif.gz_B the crystal structure of glycosyl hydrolase family 2 (gh2) member from bacteroides cellulosilyticus dsm 14838 0.9612 24 794
7rsk-assembly2.cif.gz_B the crystal structure from microfluidic crystals of glycosyl hydrolase family 2 (gh2) member from bacteroides cellulosilyticus 0.9605 24 797
6b6l-assembly1.cif.gz_A the crystal structure of glycosyl hydrolase family 2 (gh2) member from bacteroides cellulosilyticus dsm 14838 0.9575 24 794
7rsk-assembly2.cif.gz_B the crystal structure from microfluidic crystals of glycosyl hydrolase family 2 (gh2) member from bacteroides cellulosilyticus 0.9569 24 797
ID Description Score Start End Superfamily
6b6lB05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9845 687 794 2.60.40.10
5dmyC05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9813 689 797 2.60.40.10
4ypjB05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9751 689 797 2.60.40.10
5t99B05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9734 689 797 2.60.40.10
3gm8A05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9675 687 795 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A3D1AFK7-F1-model_v4 Uncharacterized protein 0.9809 661 797 GO:0006508
GO:0008234
GO:0016798
AF-K1SNL6-F1-model_v4 Glycoside hydrolase family protein 0.9795 696 797 GO:0016798
AF-A0A6N7WQY1-F1-model_v4 Glycoside hydrolase family 2 domain-containing protein 0.9762 702 795 GO:0016798
AF-A0A353RP72-F1-model_v4 Beta-galactosidase 0.9729 706 797 GO:0006508
GO:0008234
GO:0016798
AF-K1SNL6-F1-model_v4 Glycoside hydrolase family protein 0.97 696 797 GO:0016798

Map