F212701

General Info

Members Datasets Scaffolds Average Seq Length
151 124 302 388

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0089840|Ga0501032_0089840_138_1415
Length 425
Sequence MPQPSSKARLVITALFVDHQTPAEVAARYGVHRAWVYKLKARYEAEGATALEPRSRRPRTSPTALPAEVVDLIVRVRKELADAGLDAGPETVAWHLEHRHGHRVSRSTISRHLAAAGLVIPEPRKRPKSSYVRFEASMPNETWQSDFTHYRLTRPDGRPGADTEIITWLDDCTRYALHVSAHARVTTPIVVTTFREALARHGIPASTLTDNGMVYTVRLAGHGRGGGKNSFEAELSRRHITQKNSRPGHPTTCGKAERFQQTMKKWLHAQPAQPSTIAELQTLLNAFADEYNHRRPHRSLPHRATPATLYDSMPKALPGPATDPVTHERVRHDRVDKAGSVTLRHNSRLHHIGIGRTHAGTCVILLVQDLQIRVVNAATGELLRELILDPNRDYQPTGAAKGPTHRPRNEQHPDLHSQVRVSPMS

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
48 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
51 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
54 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
55 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
59 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
66 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
67 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
68 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
69 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
73 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
78 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
103 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
104 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
105 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
106 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
107 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
108 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
116 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
117 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
118 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
119 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
123 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
124 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0
Isolates 1.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.96
Nodule 0
Rhizoplane 7.28
Rhizosphere 84.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0089840 3300049569 Bacteria 2039
2 JGI25407J50210_10035469 3300003373 Bacteria 1285
3 Ga0070683_100159802 3300005329 Bacteria 2138
4 Ga0070680_100306875 3300005336 Bacteria 1346
5 Ga0070682_100178931 3300005337 Bacteria 1480
6 Ga0070661_100186666 3300005344 Bacteria 1580
7 Ga0070668_100092835 3300005347 Bacteria 2381
8 Ga0070674_100162494 3300005356 Bacteria 1695
9 Ga0070659_100148408 3300005366 Bacteria 1912
10 Ga0070681_10336667 3300005458 Bacteria 1418
11 Ga0070679_100302583 3300005530 Bacteria 1550
12 Ga0070684_100260397 3300005535 Bacteria 1587
13 Ga0070684_100294087 3300005535 Bacteria 1489
14 Ga0070672_100315520 3300005543 Bacteria 1328
15 Ga0070693_100096609 3300005547 Bacteria 1791
16 Ga0070664_100191009 3300005564 Bacteria 1825
17 Ga0070664_100337172 3300005564 Bacteria 1369
18 Ga0068857_100299453 3300005577 Bacteria 1482
19 Ga0068866_10020435 3300005718 Bacteria 3034
20 Ga0068866_10115727 3300005718 Bacteria 1503
21 Ga0068861_100012384 3300005719 Bacteria 5948
22 Ga0081538_10046299 3300005981 Bacteria 2684
23 Ga0075365_10143669 3300006038 Bacteria 1657
24 Ga0075365_10204291 3300006038 Bacteria 1384
25 Ga0070712_100126174 3300006175 Bacteria 1933
26 Ga0075370_10032253 3300006353 Bacteria 2928
27 Ga0075370_10054888 3300006353 Bacteria 2263
28 Ga0075370_10111445 3300006353 Bacteria 1589
29 Ga0114129_10648885 3300009147 Bacteria 1362
30 Ga0105243_10121360 3300009148 Bacteria 2204
31 Ga0105248_10537133 3300009177 Bacteria 1319
32 Ga0105238_10310672 3300009551 Bacteria 1561
33 Ga0157370_10265253 3300013104 Bacteria 1587
34 Ga0157369_10267418 3300013105 Bacteria 1782
35 Ga0157369_10349223 3300013105 Bacteria 1536
36 Ga0157372_10428223 3300013307 Bacteria 1542
37 Ga0157372_10428675 3300013307 Bacteria 1541
38 Ga0157372_10550486 3300013307 Bacteria 1345
39 Ga0157375_10450499 3300013308 Bacteria 1453
40 Ga0157380_10088486 3300014326 Bacteria 2549
41 Ga0207657_10097656 3300025919 Bacteria 2442
42 Ga0207649_10202029 3300025920 Bacteria 1405
43 Ga0207652_10158155 3300025921 Bacteria 2030
44 Ga0207659_10277620 3300025926 Bacteria 1369
45 Ga0207690_10060384 3300025932 Bacteria 2573
46 Ga0207669_10229699 3300025937 Bacteria 1368
47 Ga0207665_10186453 3300025939 Bacteria 1505
48 Ga0207711_10302724 3300025941 Bacteria 1475
49 Ga0207661_10270404 3300025944 Bacteria 1516
50 Ga0207679_10171181 3300025945 Bacteria 1788
51 Ga0207678_10068565 3300026067 Bacteria 3043
52 Ga0207708_10127216 3300026075 Bacteria 1989
53 Ga0207676_10268588 3300026095 Bacteria 1544
54 Ga0207674_10047442 3300026116 Bacteria 4403
55 Ga0207698_10156341 3300026142 Bacteria 1987
56 Ga0307514_10102391 3300031649 Bacteria 2052
57 Ga0316575_10042949 3300031665 Bacteria 1790
58 Ga0316576_10213880 3300031727 Bacteria 1450
59 Ga0316577_10154043 3300031733 Bacteria 1295
60 Ga0307412_10082996 3300031911 Bacteria 2220
61 Ga0307409_100132721 3300031995 Bacteria 2131
62 Ga0316583_10012473 3300032133 Bacteria 3067
63 Ga0316585_10018452 3300032137 Bacteria 2117
64 Ga0316580_10004085 3300032139 Bacteria 4204
65 Ga0316574_0101566 3300035398 Bacteria 1841
66 Ga0316574_0124027 3300035398 Bacteria 1659
67 Ga0373935_0010527 3300035692 Bacteria 5550
68 Ga0316582_0134263 3300036647 Bacteria 1664
69 Ga0316584_0243800 3300036712 Bacteria 1314
70 Ga0373925_0045250 3300037068 Bacteria 3269
71 Ga0395900_0334322 3300037418 Bacteria 1492
72 Ga0395898_0311627 3300037466 Bacteria 1501
73 Ga0316581_0028968 3300037588 Bacteria 1661
74 Ga0395901_0250402 3300038443 Bacteria 1846
75 Ga0395901_0257168 3300038443 Bacteria 1818
76 Ga0395901_0304667 3300038443 Bacteria 1651
77 Ga0451853_2375673 3300041512 Bacteria 1776
78 Ga0450888_002118 3300042126 Bacteria 1946
79 Ga0439460_0036188 3300042461 Bacteria 1431
80 Ga0466965_0065872 3300044683 Bacteria 1815
81 Ga0466968_0080847 3300044735 Bacteria 1427
82 Ga0466959_0155585 3300045049 Bacteria 1609
83 Ga0466967_0062482 3300045976 Bacteria 3306
84 Ga0466967_0142769 3300045976 Bacteria 2231
85 Ga0466967_0180019 3300045976 Bacteria 1994
86 Ga0466967_0306330 3300045976 Bacteria 1529
87 Ga0495653_0194918 3300046463 Bacteria 1379
88 Ga0495662_0078423 3300046476 Bacteria 1605
89 Ga0495664_0140102 3300046477 Bacteria 1466
90 Ga0495608_0175979 3300046511 Bacteria 1355
91 Ga0495630_0228791 3300046517 Bacteria 1420
92 Ga0495667_0154669 3300046559 Bacteria 1476
93 Ga0495657_0115455 3300046675 Bacteria 1696
94 Ga0495674_0301969 3300047319 Bacteria 1307
95 Ga0496102_0242142 3300048905 Bacteria 1701
96 Ga0496104_0223630 3300048907 Bacteria 1795
97 Ga0496106_0018033 3300048909 Bacteria 5219
98 Ga0496109_0268281 3300048912 Bacteria 1608
99 Ga0496110_0215566 3300048913 Bacteria 1745
100 Ga0496110_0293017 3300048913 Bacteria 1482
101 Ga0496110_0365140 3300048913 Bacteria 1315
102 Ga0496111_0057133 3300048914 Bacteria 2825
103 Ga0496113_0109004 3300048916 Bacteria 2153
104 Ga0496114_0031883 3300048917 Bacteria 4335
105 Ga0496114_0084121 3300048917 Bacteria 2693
106 Ga0501031_0118265 3300049568 Bacteria 1731
107 Ga0501033_0107158 3300049570 Bacteria 2036
108 Ga0501034_0155486 3300049571 Bacteria 2261
109 Ga0501036_0238761 3300049572 Bacteria 1524
110 Ga0501038_0217842 3300049574 Bacteria 1524
111 Ga0501039_0245322 3300049575 Bacteria 1408
112 Ga0501040_0052230 3300049576 Bacteria 2797
113 Ga0501040_0097401 3300049576 Bacteria 2049
114 Ga0501041_0125614 3300049577 Bacteria 1596
115 Ga0501042_0008549 3300049578 Bacteria 6768
116 Ga0501042_0146420 3300049578 Bacteria 1703
117 Ga0501046_0098648 3300049580 Bacteria 2243
118 Ga0501048_0048057 3300049582 Bacteria 3044
119 Ga0501067_0000747 3300049583 Bacteria 17480
120 Ga0501068_0018776 3300049584 Bacteria 4006
121 Ga0501070_0001034 3300049586 Bacteria 25035
122 Ga0501071_0220145 3300049587 Bacteria 1428
123 Ga0501072_0050096 3300049588 Bacteria 3288
124 Ga0501072_0205929 3300049588 Bacteria 1568
125 Ga0501073_0000753 3300049589 Bacteria 22937
126 Ga0501073_0152922 3300049589 Bacteria 1599
127 Ga0501074_0000550 3300049590 Bacteria 23124
128 Ga0501075_0203953 3300049591 Bacteria 1508
129 Ga0501076_0082305 3300049592 Bacteria 2584
130 Ga0501076_0188140 3300049592 Bacteria 1684
131 Ga0501077_0045791 3300049593 Bacteria 2779
132 Ga0501079_0231352 3300049741 Bacteria 1444
133 Ga0501080_0004350 3300049742 Bacteria 12582
134 Ga0501080_0094489 3300049742 Bacteria 2776
135 Ga0501081_0076344 3300049743 Bacteria 2340
136 Ga0501083_0043892 3300049744 Bacteria 3027
137 Ga0501083_0211446 3300049744 Bacteria 1264
138 Ga0501035_0188273 3300049822 Bacteria 1775
139 Ga0501045_0263320 3300049824 Bacteria 1283
140 nmdc:mga03n38_107309_c1 3300050490 Bacteria 1355
141 nmdc:mga0yw44_138783_c1 3300050492 Bacteria 1579
142 nmdc:mga07m45_27461_c1 3300050496 Bacteria 3136
143 nmdc:mga07m45_68922_c1 3300050496 Bacteria 2011
144 Ga0495595_0105765 3300053084 Bacteria 1361
145 Ga0495619_0065648 3300053085 Bacteria 2421
146 Ga0501084_0287872 3300054114 Bacteria 1387
147 Ga0501082_0005250 3300060353 Bacteria 11259
148 Ga0501082_0090394 3300060353 Bacteria 2643
149 Ga0530510_0193852 3300061734 Bacteria 1508
150 2819427624 2818991318 Bacteria 5266538
151 2837274713 2837268691 Bacteria 7850704
152 Ga0501032_0089840
153 JGI25407J50210_10035469
154 Ga0070683_100159802
155 Ga0070680_100306875
156 Ga0070682_100178931
157 Ga0070661_100186666
158 Ga0070668_100092835
159 Ga0070674_100162494
160 Ga0070659_100148408
161 Ga0070681_10336667
162 Ga0070679_100302583
163 Ga0070684_100260397
164 Ga0070684_100294087
165 Ga0070672_100315520
166 Ga0070693_100096609
167 Ga0070664_100191009
168 Ga0070664_100337172
169 Ga0068857_100299453
170 Ga0068866_10020435
171 Ga0068866_10115727
172 Ga0068861_100012384
173 Ga0081538_10046299
174 Ga0075365_10143669
175 Ga0075365_10204291
176 Ga0070712_100126174
177 Ga0075370_10032253
178 Ga0075370_10054888
179 Ga0075370_10111445
180 Ga0114129_10648885
181 Ga0105243_10121360
182 Ga0105248_10537133
183 Ga0105238_10310672
184 Ga0157370_10265253
185 Ga0157369_10267418
186 Ga0157369_10349223
187 Ga0157372_10428223
188 Ga0157372_10428675
189 Ga0157372_10550486
190 Ga0157375_10450499
191 Ga0157380_10088486
192 Ga0207657_10097656
193 Ga0207649_10202029
194 Ga0207652_10158155
195 Ga0207659_10277620
196 Ga0207690_10060384
197 Ga0207669_10229699
198 Ga0207665_10186453
199 Ga0207711_10302724
200 Ga0207661_10270404
201 Ga0207679_10171181
202 Ga0207678_10068565
203 Ga0207708_10127216
204 Ga0207676_10268588
205 Ga0207674_10047442
206 Ga0207698_10156341
207 Ga0307514_10102391
208 Ga0316575_10042949
209 Ga0316576_10213880
210 Ga0316577_10154043
211 Ga0307412_10082996
212 Ga0307409_100132721
213 Ga0316583_10012473
214 Ga0316585_10018452
215 Ga0316580_10004085
216 Ga0316574_0101566
217 Ga0316574_0124027
218 Ga0373935_0010527
219 Ga0316582_0134263
220 Ga0316584_0243800
221 Ga0373925_0045250
222 Ga0395900_0334322
223 Ga0395898_0311627
224 Ga0316581_0028968
225 Ga0395901_0250402
226 Ga0395901_0257168
227 Ga0395901_0304667
228 Ga0451853_2375673
229 Ga0450888_002118
230 Ga0439460_0036188
231 Ga0466965_0065872
232 Ga0466968_0080847
233 Ga0466959_0155585
234 Ga0466967_0062482
235 Ga0466967_0142769
236 Ga0466967_0180019
237 Ga0466967_0306330
238 Ga0495653_0194918
239 Ga0495662_0078423
240 Ga0495664_0140102
241 Ga0495608_0175979
242 Ga0495630_0228791
243 Ga0495667_0154669
244 Ga0495657_0115455
245 Ga0495674_0301969
246 Ga0496102_0242142
247 Ga0496104_0223630
248 Ga0496106_0018033
249 Ga0496109_0268281
250 Ga0496110_0215566
251 Ga0496110_0293017
252 Ga0496110_0365140
253 Ga0496111_0057133
254 Ga0496113_0109004
255 Ga0496114_0031883
256 Ga0496114_0084121
257 Ga0501031_0118265
258 Ga0501033_0107158
259 Ga0501034_0155486
260 Ga0501036_0238761
261 Ga0501038_0217842
262 Ga0501039_0245322
263 Ga0501040_0052230
264 Ga0501040_0097401
265 Ga0501041_0125614
266 Ga0501042_0008549
267 Ga0501042_0146420
268 Ga0501046_0098648
269 Ga0501048_0048057
270 Ga0501067_0000747
271 Ga0501068_0018776
272 Ga0501070_0001034
273 Ga0501071_0220145
274 Ga0501072_0050096
275 Ga0501072_0205929
276 Ga0501073_0000753
277 Ga0501073_0152922
278 Ga0501074_0000550
279 Ga0501075_0203953
280 Ga0501076_0082305
281 Ga0501076_0188140
282 Ga0501077_0045791
283 Ga0501079_0231352
284 Ga0501080_0004350
285 Ga0501080_0094489
286 Ga0501081_0076344
287 Ga0501083_0043892
288 Ga0501083_0211446
289 Ga0501035_0188273
290 Ga0501045_0263320
291 nmdc:mga03n38_107309_c1
292 nmdc:mga0yw44_138783_c1
293 nmdc:mga07m45_27461_c1
294 nmdc:mga07m45_68922_c1
295 Ga0495595_0105765
296 Ga0495619_0065648
297 Ga0501084_0287872
298 Ga0501082_0005250
299 Ga0501082_0090394
300 Ga0530510_0193852
301 2819427624
302 2837274713

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00665

rve

Integrase core domain

136

250

0.98

PF13565

HTH_32

Homeodomain-like domain

35

113

0.92

PF13683

rve_3

Integrase core domain

238

306

0.92

PF13518

HTH_28

Helix-turn-helix domain

9

59

0.91

PF13551

HTH_29

Winged helix-turn helix

12

65

0.89

PF13384

HTH_23

Homeodomain-like domain

4

52

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vfz-assembly3.cif.gz_B crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.8932 3 41
5d68-assembly3.cif.gz_C crystal structure of krit1 ard-ferm 0.8875 355 381
3so6-assembly1.cif.gz_A crystal structure of the ldl receptor tail in complex with autosomal recessive hypercholesterolemia ptb domain 0.8871 355 381
5d68-assembly2.cif.gz_B crystal structure of krit1 ard-ferm 0.8835 354 381
4dbb-assembly1.cif.gz_A the ptb domain of mint1 is autoinhibited by a helix in the c-terminal linker region 0.8809 355 381
ID Description Score Start End Superfamily
af_Q9SYK4_128_376_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.9212 357 382 2.130.10.10
af_Q9V3C8_18_177_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8996 352 381 2.30.29.30
af_E7FGG0_272_434_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8983 353 381 2.30.29.30
af_Q19411_132_234_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8981 352 381 2.30.29.30
3vfzB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8932 3 41 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3C0XPY3-F1-model_v4 Transposase 0.9878 323 390
AF-A0A1A3QJ95-F1-model_v4 Uncharacterized protein 0.9861 328 393
AF-A0A6L9G1U7-F1-model_v4 Uncharacterized protein 0.971 323 388
AF-A0A7Z0CV35-F1-model_v4 deleted 0.9687 324 389
AF-A0A2U2NAA7-F1-model_v4 IS481 family transposase 0.9535 132 313 GO:0003676
GO:0015074

Map