F212667
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 151 | 53 | 54 | 452 |
Family's Representative Sequence
| Representative Sequence | 3300048928|Ga0496125_0044439|Ga0496125_0044439_859_2295 |
| Length | 478 |
| Sequence | LHTDNLVFGVFILEGGVPLEPTTTIRDHLERYLKREQMSISLFSELSGINSGTLSNILNKNRPISMQQLDRITMAMKLEAGHFYELYIDECFVHATPDWRRLGPFLHRCAELDKLDCIEEVVRLMMDNLSYIPMLFDVAEEFYHAGKWKPATLLYETIAESEKMQHSERLALCQYRLFKLGLSNDQQRNVIIAAQFEYYVDRLDERYQLDALNELINAFASLHRWSKVQELSEKLRVKATIHYELNGRKKAEETKRPIIFYVMYAYLASGSAYFHLDNYETALKYVSLYTDSSWVKDPDHEEMVVIQQFQEWAEGNRYIYQLMAGQFEILPQYLAYISTKENEIFPALCDIVTAANRYDMDIDDVLEEYAPHFTYQEQRNRIGKVSKQVTDDRYVRLLAGLGKYYLKRDHFAQGLNFVLDSLRFAIEISDGRGMLRSVGLFEQYRDYASDTAIQQYKILIGEVQKINEEKTGFADSYL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2548877040 | Paenibacillus sonchi X19-5 | Isolate | Rhizosphere |
| 2 | 2571042143 | Paenibacillus graminis RSA19 | Isolate | Unclassified |
| 3 | 2579778775 | Paenibacillus durus P3L-5 | Isolate | Unclassified |
| 4 | 2600255286 | Paenibacillus sp. NFR01 | Isolate | Rhizoplane |
| 5 | 2619619294 | Paenibacillus durus ATCC 35681 | Isolate | Unclassified |
| 6 | 2643221543 | Paenibacillus sp. Root52 | Isolate | Unclassified |
| 7 | 2721755693 | Paenibacillus polymyxa YC0573 | Isolate | Rhizosphere |
| 8 | 2728368933 | Paenibacillus jilunlii DSM 23019 | Isolate | Rhizosphere |
| 9 | 2728369359 | Paenibacillus polymyxa YC0136 | Isolate | Rhizosphere |
| 10 | 2751185905 | Paenibacillus kribbensis 6hRe76 | Isolate | Unclassified |
| 11 | 2802428803 | Paenibacillus peoriae NMA1017 | Isolate | Rhizosphere |
| 12 | 2821111986 | Paenibacillus illinoisensis 582 | Isolate | Unclassified |
| 13 | 2864733723 | Paenibacillus sp. JGP012 | Isolate | Rhizosphere |
| 14 | 2885526491 | Paenibacillus sp. LK1 | Isolate | Rhizosphere |
| 15 | 2889042446 | Paenibacillus sp. 37 | Isolate | Rhizosphere |
| 16 | 2889276214 | Paenibacillus sp. PvR133 | Isolate | Rhizosphere |
| 17 | 2904162308 | Paenibacillus sp. AD87 | Isolate | Unclassified |
| 18 | 2904490793 | Paenibacillus sp. 1295 | Isolate | Rhizosphere |
| 19 | 2904595352 | Paenibacillus sp. 1182 | Isolate | Unclassified |
| 20 | 2919160200 | Paenibacillus sp. 2003 | Isolate | Unclassified |
| 21 | 2929206907 | Paenibacillus sp. R-74146 Hybrid assembly | Isolate | Unclassified |
| 22 | 2931384279 | Paenibacillus sp. DR312 | Isolate | Rhizosphere |
| 23 | 2938649242 | Paenibacillus helianthi P26E | Isolate | Rhizosphere |
| 24 | 2939679117 | Paenibacillus sp. 4624 | Isolate | Rhizosphere |
| 25 | 2939702853 | Paenibacillus sp. PvR008 | Isolate | Rhizosphere |
| 26 | 2945991243 | Paenibacillus sp. B21a W2I17 | Isolate | Rhizosphere |
| 27 | 2946053406 | Paenibacillus sp. W4I10 | Isolate | Rhizosphere |
| 28 | 2968558590 | Paenibacillus sp. P3E | Isolate | Rhizosphere |
| 29 | 2971403814 | Paenibacillus tritici LMG 29502 | Isolate | Unclassified |
| 30 | 2988225383 | Paenibacillus sp. P46E | Isolate | Rhizosphere |
| 31 | 2996632988 | Paenibacillus sp. P32E | Isolate | Rhizosphere |
| 32 | 2996706504 | Paenibacillus sp. OT2-17 | Isolate | Rhizosphere |
| 33 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 34 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 35 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 41 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 42 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 43 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 44 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 45 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 46 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 47 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 48 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 49 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 50 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 51 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 52 | 648028048 | Paenibacillus polymyxa E681 | Isolate | Rhizosphere |
| 53 | 8054465665 | Paenibacillus sonchi IIRRBNF1 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 49.67 |
| Metatranscriptomes | 0.66 |
| Isolates | 49.67 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.97 |
| Nodule | 0 |
| Rhizoplane | 0.66 |
| Rhizosphere | 41.06 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 54.3 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25162J39368_1002926 | 3300002737 | Bacteria | 5786 |
| 2 | JGI25162J39368_1004534 | 3300002737 | Bacteria | 3169 |
| 3 | Ga0006562J51391_1021370 | 3300003578 | Bacteria | 1726 |
| 4 | Ga0105251_10012427 | 3300009011 | Bacteria | 4817 |
| 5 | Ga0105251_10015563 | 3300009011 | Bacteria | 4150 |
| 6 | Ga0105244_10011899 | 3300009036 | Bacteria | 5181 |
| 7 | Ga0105244_10012865 | 3300009036 | Bacteria | 4925 |
| 8 | Ga0105246_10000007 | 3300011119 | Bacteria | 83047 |
| 9 | Ga0105246_10000318 | 3300011119 | Bacteria | 25506 |
| 10 | Ga0105246_10008139 | 3300011119 | Bacteria | 6436 |
| 11 | Ga0209437_100669 | 3300025233 | Bacteria | 18841 |
| 12 | Ga0209437_100732 | 3300025233 | Bacteria | 16562 |
| 13 | Ga0207655_1008653 | 3300025728 | Bacteria | 6427 |
| 14 | Ga0495637_0035545 | 3300046520 | Bacteria | 2175 |
| 15 | Ga0495660_0005325 | 3300046810 | Bacteria | 7706 |
| 16 | Ga0495660_0024795 | 3300046810 | Bacteria | 3414 |
| 17 | Ga0496116_0001534 | 3300048919 | Bacteria | 25620 |
| 18 | Ga0496116_0001768 | 3300048919 | Bacteria | 23557 |
| 19 | Ga0496116_0008593 | 3300048919 | Bacteria | 8838 |
| 20 | Ga0496116_0009201 | 3300048919 | Bacteria | 8456 |
| 21 | Ga0496116_0017107 | 3300048919 | Bacteria | 5646 |
| 22 | Ga0496116_0032876 | 3300048919 | Bacteria | 3690 |
| 23 | Ga0496116_0046134 | 3300048919 | Bacteria | 2943 |
| 24 | Ga0496117_0005080 | 3300048920 | Bacteria | 14079 |
| 25 | Ga0496117_0021712 | 3300048920 | Bacteria | 5181 |
| 26 | Ga0496117_0021715 | 3300048920 | Bacteria | 5181 |
| 27 | Ga0496117_0045783 | 3300048920 | Bacteria | 3155 |
| 28 | Ga0496119_0001320 | 3300048922 | Bacteria | 30478 |
| 29 | Ga0496119_0033185 | 3300048922 | Bacteria | 3427 |
| 30 | Ga0496119_0038117 | 3300048922 | Bacteria | 3111 |
| 31 | Ga0496120_0001032 | 3300048923 | Bacteria | 37257 |
| 32 | Ga0496121_0065209 | 3300048924 | Bacteria | 2964 |
| 33 | Ga0496121_0091979 | 3300048924 | Bacteria | 2366 |
| 34 | Ga0496122_0001153 | 3300048925 | Bacteria | 45360 |
| 35 | Ga0496122_0010933 | 3300048925 | Bacteria | 9282 |
| 36 | Ga0496122_0014052 | 3300048925 | Bacteria | 7773 |
| 37 | Ga0496122_0014093 | 3300048925 | Bacteria | 7759 |
| 38 | Ga0496122_0085276 | 3300048925 | Unclassified | 2180 |
| 39 | Ga0496123_0044479 | 3300048926 | Bacteria | 3036 |
| 40 | Ga0496124_0000360 | 3300048927 | Bacteria | 83057 |
| 41 | Ga0496124_0000628 | 3300048927 | Bacteria | 58692 |
| 42 | Ga0496124_0027425 | 3300048927 | Bacteria | 5112 |
| 43 | Ga0496124_0057843 | 3300048927 | Bacteria | 3265 |
| 44 | Ga0496124_0182207 | 3300048927 | Bacteria | 1615 |
| 45 | Ga0496125_0003333 | 3300048928 | Bacteria | 19597 |
| 46 | Ga0496125_0044439 | 3300048928 | Bacteria | 3757 |
| 47 | Ga0496125_0045506 | 3300048928 | Bacteria | 3692 |
| 48 | Ga0496125_0047696 | 3300048928 | Bacteria | 3579 |
| 49 | Ga0496125_0081036 | 3300048928 | Bacteria | 2482 |
| 50 | Ga0496126_0000279 | 3300048929 | Bacteria | 107977 |
| 51 | Ga0496126_0002178 | 3300048929 | Bacteria | 27221 |
| 52 | Ga0496126_0002410 | 3300048929 | Bacteria | 25352 |
| 53 | Ga0496126_0005485 | 3300048929 | Bacteria | 14456 |
| 54 | Ga0496126_0012769 | 3300048929 | Bacteria | 8585 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2864733723 | 2864739740 | 338 |
| 2 | 3300048928 | Ga0496125_0047696 | Ga0496125_0047696_667_1773 | 339 |
| 3 | 3300009011 | Ga0105251_10012427 | Ga0105251_100124272 | 389 |
| 4 | 3300011119 | Ga0105246_10008139 | Ga0105246_100081394 | 390 |
| 5 | 3300048919 | Ga0496116_0001768 | Ga0496116_0001768_10992_12347 | 390 |
| 6 | 3300048927 | Ga0496124_0182207 | Ga0496124_0182207_218_1573 | 390 |
| 7 | 3300048925 | Ga0496122_0014093 | Ga0496122_0014093_3771_5075 | 396 |
| 8 | 3300048929 | Ga0496126_0005485 | Ga0496126_0005485_6542_7846 | 396 |
| 9 | iso_pu_bacteria | 2938649242 | 2938652460 | 398 |
| 10 | iso_pu_bacteria | 2968558590 | 2968561772 | 398 |
| 11 | iso_pu_bacteria | 2571042143 | 2571527314 | 400 |
| 12 | iso_pu_bacteria | 2988225383 | 2988227524 | 400 |
| 13 | iso_pu_bacteria | 2996632988 | 2996637863 | 400 |
| 14 | iso_pu_bacteria | 2548877040 | 2550905843 | 401 |
| 15 | iso_pu_bacteria | 8054465665 | 8054471531 | 401 |
| 16 | 3300048919 | Ga0496116_0008593 | Ga0496116_0008593_1921_3222 | 403 |
| 17 | 3300048922 | Ga0496119_0001320 | Ga0496119_0001320_27311_28612 | 403 |
| 18 | 3300048923 | Ga0496120_0001032 | Ga0496120_0001032_22370_23671 | 403 |
| 19 | 3300048925 | Ga0496122_0010933 | Ga0496122_0010933_3821_5152 | 403 |
| 20 | 3300048925 | Ga0496122_0014052 | Ga0496122_0014052_6369_7670 | 403 |
| 21 | 3300048927 | Ga0496124_0000628 | Ga0496124_0000628_40849_42150 | 403 |
| 22 | 3300048929 | Ga0496126_0000279 | Ga0496126_0000279_24924_26225 | 403 |
| 23 | 3300048929 | Ga0496126_0005485 | Ga0496126_0005485_3350_4660 | 403 |
| 24 | iso_pu_bacteria | 2728368933 | 2728530362 | 403 |
| 25 | iso_pu_bacteria | 2971403814 | 2971410284 | 406 |
| 26 | 3300009011 | Ga0105251_10015563 | Ga0105251_100155632 | 410 |
| 27 | 3300011119 | Ga0105246_10000318 | Ga0105246_1000031821 | 410 |
| 28 | 3300011119 | Ga0105246_10008139 | Ga0105246_100081395 | 410 |
| 29 | 3300046810 | Ga0495660_0005325 | Ga0495660_0005325_1656_3047 | 410 |
| 30 | 3300048919 | Ga0496116_0001534 | Ga0496116_0001534_11897_13333 | 410 |
| 31 | 3300048919 | Ga0496116_0001768 | Ga0496116_0001768_9592_10917 | 410 |
| 32 | 3300048919 | Ga0496116_0017107 | Ga0496116_0017107_3966_5291 | 410 |
| 33 | 3300048927 | Ga0496124_0057843 | Ga0496124_0057843_1133_2569 | 410 |
| 34 | 3300048928 | Ga0496125_0045506 | Ga0496125_0045506_1485_2909 | 410 |
| 35 | 3300048924 | Ga0496121_0091979 | Ga0496121_0091979_490_1872 | 413 |
| 36 | 3300046520 | Ga0495637_0035545 | Ga0495637_0035545_159_1574 | 414 |
| 37 | 3300046810 | Ga0495660_0024795 | Ga0495660_0024795_149_1564 | 414 |
| 38 | iso_pu_bacteria | 2643221543 | 2643740668 | 414 |
| 39 | iso_pu_bacteria | 2751185905 | 2753808918 | 415 |
| 40 | iso_pu_bacteria | 2929206907 | 2929208052 | 415 |
| 41 | iso_pu_bacteria | 2643221543 | 2643740812 | 416 |
| 42 | iso_pu_bacteria | 2939679117 | 2939684404 | 416 |
| 43 | iso_pu_bacteria | 2579778775 | 2580934728 | 417 |
| 44 | iso_pu_bacteria | 2619619294 | 2621277311 | 417 |
| 45 | iso_pu_bacteria | 2864733723 | 2864739741 | 418 |
| 46 | iso_pu_bacteria | 2864733723 | 2864739742 | 418 |
| 47 | iso_pu_bacteria | 2889042446 | 2889043030 | 418 |
| 48 | iso_pu_bacteria | 2904490793 | 2904495979 | 418 |
| 49 | iso_pu_bacteria | 2919160200 | 2919164746 | 418 |
| 50 | iso_pu_bacteria | 2919160200 | 2919164865 | 418 |
| 51 | iso_pu_bacteria | 2931384279 | 2931386453 | 418 |
| 52 | iso_pu_bacteria | 2939679117 | 2939684405 | 418 |
| 53 | iso_pu_bacteria | 2946053406 | 2946057680 | 418 |
| 54 | iso_pu_bacteria | 2971403814 | 2971407043 | 418 |
| 55 | iso_pu_bacteria | 2643221543 | 2643740810 | 419 |
| 56 | iso_pu_bacteria | 2643221543 | 2643740814 | 419 |
| 57 | iso_pu_bacteria | 2643221543 | 2643741166 | 419 |
| 58 | iso_pu_bacteria | 2821111986 | 2821116318 | 419 |
| 59 | iso_pu_bacteria | 2864733723 | 2864734365 | 419 |
| 60 | iso_pu_bacteria | 2864733723 | 2864736563 | 419 |
| 61 | iso_pu_bacteria | 2885526491 | 2885532734 | 419 |
| 62 | iso_pu_bacteria | 2889042446 | 2889048603 | 419 |
| 63 | iso_pu_bacteria | 2904162308 | 2904167550 | 419 |
| 64 | iso_pu_bacteria | 2904490793 | 2904494856 | 419 |
| 65 | iso_pu_bacteria | 2919160200 | 2919164027 | 419 |
| 66 | iso_pu_bacteria | 2931384279 | 2931385715 | 419 |
| 67 | iso_pu_bacteria | 2939679117 | 2939680527 | 419 |
| 68 | iso_pu_bacteria | 2945991243 | 2945995671 | 419 |
| 69 | iso_pu_bacteria | 2946053406 | 2946058390 | 419 |
| 70 | iso_pu_bacteria | 2971403814 | 2971404374 | 419 |
| 71 | 3300002737 | JGI25162J39368_1004534 | JGI25162J39368_10045341 | 420 |
| 72 | 3300009036 | Ga0105244_10011899 | Ga0105244_100118996 | 420 |
| 73 | 3300009036 | Ga0105244_10012865 | Ga0105244_100128654 | 420 |
| 74 | 3300011119 | Ga0105246_10000007 | Ga0105246_1000000745 | 420 |
| 75 | 3300025233 | Ga0209437_100669 | Ga0209437_10066916 | 420 |
| 76 | 3300025728 | Ga0207655_1008653 | Ga0207655_10086534 | 420 |
| 77 | 3300048925 | Ga0496122_0001153 | Ga0496122_0001153_29621_31042 | 420 |
| 78 | 3300048927 | Ga0496124_0027425 | Ga0496124_0027425_986_2386 | 420 |
| 79 | 3300048928 | Ga0496125_0044439 | Ga0496125_0044439_859_2295 | 420 |
| 80 | iso_pu_bacteria | 2548877040 | 2550901663 | 420 |
| 81 | iso_pu_bacteria | 2548877040 | 2550904506 | 420 |
| 82 | iso_pu_bacteria | 2571042143 | 2571528549 | 420 |
| 83 | iso_pu_bacteria | 2600255286 | 2601641087 | 420 |
| 84 | iso_pu_bacteria | 2728368933 | 2728529614 | 420 |
| 85 | iso_pu_bacteria | 2802428803 | 2802437651 | 420 |
| 86 | iso_pu_bacteria | 2939679117 | 2939680133 | 420 |
| 87 | iso_pu_bacteria | 8054465665 | 8054467062 | 420 |
| 88 | iso_pu_bacteria | 8054465665 | 8054472238 | 420 |
| 89 | 3300048919 | Ga0496116_0008593 | Ga0496116_0008593_3556_4929 | 421 |
| 90 | 3300048919 | Ga0496116_0008593 | Ga0496116_0008593_52_1458 | 421 |
| 91 | 3300048919 | Ga0496116_0009201 | Ga0496116_0009201_5586_6974 | 421 |
| 92 | 3300048920 | Ga0496117_0005080 | Ga0496117_0005080_1658_3064 | 421 |
| 93 | 3300048920 | Ga0496117_0021715 | Ga0496117_0021715_3455_4843 | 421 |
| 94 | 3300048920 | Ga0496117_0045783 | Ga0496117_0045783_1351_2724 | 421 |
| 95 | 3300048922 | Ga0496119_0001320 | Ga0496119_0001320_25604_26977 | 421 |
| 96 | 3300048922 | Ga0496119_0038117 | Ga0496119_0038117_1169_2557 | 421 |
| 97 | 3300048923 | Ga0496120_0001032 | Ga0496120_0001032_20549_21907 | 421 |
| 98 | 3300048923 | Ga0496120_0001032 | Ga0496120_0001032_24005_25378 | 421 |
| 99 | 3300048925 | Ga0496122_0014052 | Ga0496122_0014052_4500_5906 | 421 |
| 100 | 3300048925 | Ga0496122_0014093 | Ga0496122_0014093_1994_3367 | 421 |
| 101 | 3300048925 | Ga0496122_0014093 | Ga0496122_0014093_522_1889 | 421 |
| 102 | 3300048925 | Ga0496122_0085276 | Ga0496122_0085276_459_1847 | 421 |
| 103 | 3300048927 | Ga0496124_0000360 | Ga0496124_0000360_53545_54933 | 421 |
| 104 | 3300048927 | Ga0496124_0000628 | Ga0496124_0000628_38980_40386 | 421 |
| 105 | 3300048927 | Ga0496124_0000628 | Ga0496124_0000628_42484_43857 | 421 |
| 106 | 3300048928 | Ga0496125_0081036 | Ga0496125_0081036_237_1625 | 421 |
| 107 | 3300048929 | Ga0496126_0000279 | Ga0496126_0000279_23217_24590 | 421 |
| 108 | 3300048929 | Ga0496126_0000279 | Ga0496126_0000279_26688_28094 | 421 |
| 109 | 3300048929 | Ga0496126_0002178 | Ga0496126_0002178_1975_3363 | 421 |
| 110 | 3300048929 | Ga0496126_0002410 | Ga0496126_0002410_23201_24601 | 421 |
| 111 | 3300048929 | Ga0496126_0005485 | Ga0496126_0005485_1473_2882 | 421 |
| 112 | 3300048929 | Ga0496126_0005485 | Ga0496126_0005485_4765_6138 | 421 |
| 113 | iso_pu_bacteria | 2721755693 | 2723606685 | 421 |
| 114 | iso_pu_bacteria | 2728369359 | 2730137276 | 421 |
| 115 | iso_pu_bacteria | 2751185905 | 2753809032 | 421 |
| 116 | iso_pu_bacteria | 2751185905 | 2753809051 | 421 |
| 117 | iso_pu_bacteria | 2802428803 | 2802437641 | 421 |
| 118 | iso_pu_bacteria | 2885526491 | 2885528395 | 421 |
| 119 | iso_pu_bacteria | 2889276214 | 2889277231 | 421 |
| 120 | iso_pu_bacteria | 2904162308 | 2904168713 | 421 |
| 121 | iso_pu_bacteria | 2904595352 | 2904596047 | 421 |
| 122 | iso_pu_bacteria | 2904595352 | 2904596057 | 421 |
| 123 | iso_pu_bacteria | 2919160200 | 2919164866 | 421 |
| 124 | iso_pu_bacteria | 2919160200 | 2919164867 | 421 |
| 125 | iso_pu_bacteria | 2938649242 | 2938651509 | 421 |
| 126 | iso_pu_bacteria | 2939679117 | 2939684406 | 421 |
| 127 | iso_pu_bacteria | 2939702853 | 2939703220 | 421 |
| 128 | iso_pu_bacteria | 2946053406 | 2946057809 | 421 |
| 129 | iso_pu_bacteria | 2946053406 | 2946057810 | 421 |
| 130 | iso_pu_bacteria | 2968558590 | 2968558994 | 421 |
| 131 | iso_pu_bacteria | 2988225383 | 2988228015 | 421 |
| 132 | iso_pu_bacteria | 2996632988 | 2996636274 | 421 |
| 133 | iso_pu_bacteria | 2996706504 | 2996707856 | 421 |
| 134 | iso_pu_bacteria | 648028048 | 648172654 | 421 |
| 135 | 3300002737 | JGI25162J39368_1002926 | JGI25162J39368_10029264 | 422 |
| 136 | 3300002737 | JGI25162J39368_1002926 | JGI25162J39368_10029265 | 422 |
| 137 | 3300003578 | Ga0006562J51391_1021370 | Ga0006562J51391_10213702 | 422 |
| 138 | 3300009011 | Ga0105251_10012427 | Ga0105251_100124273 | 422 |
| 139 | 3300011119 | Ga0105246_10008139 | Ga0105246_100081393 | 422 |
| 140 | 3300025233 | Ga0209437_100732 | Ga0209437_1007324 | 422 |
| 141 | 3300025233 | Ga0209437_100732 | Ga0209437_1007325 | 422 |
| 142 | 3300048919 | Ga0496116_0001768 | Ga0496116_0001768_12381_13712 | 422 |
| 143 | 3300048919 | Ga0496116_0032876 | Ga0496116_0032876_1668_3077 | 422 |
| 144 | 3300048919 | Ga0496116_0046134 | Ga0496116_0046134_387_1796 | 422 |
| 145 | 3300048920 | Ga0496117_0021712 | Ga0496117_0021712_2577_3986 | 422 |
| 146 | 3300048922 | Ga0496119_0033185 | Ga0496119_0033185_929_2338 | 422 |
| 147 | 3300048924 | Ga0496121_0065209 | Ga0496121_0065209_945_2354 | 422 |
| 148 | 3300048926 | Ga0496123_0044479 | Ga0496123_0044479_629_2038 | 422 |
| 149 | 3300048928 | Ga0496125_0003333 | Ga0496125_0003333_13358_14767 | 422 |
| 150 | 3300048929 | Ga0496126_0012769 | Ga0496126_0012769_6194_7603 | 422 |
| 151 | iso_pu_bacteria | 2885526491 | 2885528393 | 422 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1y7y-assembly1.cif.gz_B | high-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila | 0.922 | 5 | 58 |
| 2icp-assembly1.cif.gz_A | crystal structure of the bacterial antitoxin higa from escherichia coli at ph 4.0. northeast structural genomics consortium target er390. | 0.9187 | 5 | 55 |
| 5d4z-assembly3.cif.gz_F | crystal structure of repressor from salmonella-temperate phage | 0.9173 | 5 | 58 |
| 6jq1-assembly1.cif.gz_A | crystal structure of ddro from deinococcus geothermalis | 0.9106 | 1 | 57 |
| 3vk0-assembly1.cif.gz_A | crystal structure of hypothetical transcription factor nhtf from neisseria | 0.9071 | 5 | 58 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1y7yB00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.922 | 5 | 58 | 1.10.260.40 |
| 3vk0A00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9071 | 5 | 58 | 1.10.260.40 |
| 1y7yA00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9035 | 5 | 58 | 1.10.260.40 |
| 2xcjB00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.8892 | 1 | 54 | 1.10.260.40 |
| 6f8sA00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.8781 | 9 | 56 | 1.10.260.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2W6N8J4-F1-model_v4 | HTH cro/C1-type domain-containing protein | 0.9935 | 1 | 91 |
GO:0003677
|
| AF-A0A2S6NY10-F1-model_v4 | deleted | 0.9833 | 1 | 207 |
|
| AF-A0A1G5H5T1-F1-model_v4 | HTH cro/C1-type domain-containing protein | 0.978 | 1 | 227 |
GO:0003677
|
| AF-A0A2V4VUM5-F1-model_v4 | Uncharacterized protein | 0.9765 | 56 | 192 |
|
| AF-A0A6B0Q7L0-F1-model_v4 | deleted | 0.9736 | 1 | 137 |
|
Predicted Structure (AlphaFold2)
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