F210944

General Info

Members Datasets Scaffolds Average Seq Length
151 128 302 450

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100010889|Ga0070698_1000108895
Length 473
Sequence MTGRAMPRRQEPGSTANGSTAMRLSRRAFLAGTAGGAALALTGCTTGTAQLSSGGSGTTVTVAIVSNSQMQDAISLSYLFEREHPGVQLNFVSLPENEARAKITADVSAQGGEFDVVMISNYETPMWSANGWLVNLQPYIDATPGYDAADFLPQLRATLSYKGDLYSVPFYGESSFLMYRKDLMARAGITMPLHPTWTQVEQIAAELHQPKRGQAGICLRGLPGWGENLAPIDTVINTFGGRWFNMAWQAQLTSAEVTRAVSTYVSMLQRYGEPGAPEDGFSECATLYSQGGAAMWYDATSAVSVIEDPASSKVAGRNGYAWAPSQDGRPSGWLYTWSLSIPSTCPNKQAAWDFISWMTSKSYIRTVGEKLGLSHVPPGSRLSSYQIPEYRKLSAVYGPLTLQSINATDSAHPTVMPVPYTGIGFLDIPEFEDLGTNVSEQFSAAIAGQKPVAAALALAQLYAQAVGNTYRPA

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
15 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
16 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
21 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
22 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
23 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
38 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
39 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
42 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
43 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
44 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
45 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
46 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
47 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
48 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
49 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
50 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
51 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
52 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
58 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
59 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
60 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
61 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
62 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
63 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
64 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
65 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
66 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
67 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
68 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
75 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
76 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
79 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
80 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
81 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
82 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
83 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
84 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
85 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
86 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
87 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
88 2582580736 Prauserella sp. Am3 Isolate Unclassified
89 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
90 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
91 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
92 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
93 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
94 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
95 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
96 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
97 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
98 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
99 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
100 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
101 2808606394 Promicromonospora sp. C35 Isolate Unclassified
102 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
103 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
104 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
105 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
106 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
107 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
108 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
109 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
110 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
111 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
112 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
113 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
114 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
115 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
116 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
117 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
118 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
119 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
120 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
121 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
122 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
123 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
124 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
125 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
126 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
127 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
128 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 68.87
Metatranscriptomes 0
Isolates 31.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.3
Nodule 0
Rhizoplane 9.27
Rhizosphere 57.62
Stem 0
Stem Tuber 0.66
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100010889 3300005471 Bacteria 9674
2 JGI25407J50210_10013342 3300003373 Bacteria 2112
3 Ga0070668_100001165 3300005347 Bacteria 18582
4 Ga0070709_10020192 3300005434 Bacteria 3862
5 Ga0070714_100066899 3300005435 Bacteria 3097
6 Ga0070714_100140209 3300005435 Bacteria 2169
7 Ga0070713_100023229 3300005436 Bacteria 4807
8 Ga0070713_100228568 3300005436 Bacteria 1690
9 Ga0070710_10041208 3300005437 Bacteria 2548
10 Ga0070711_100056453 3300005439 Bacteria 2715
11 Ga0070663_100003517 3300005455 Bacteria 9043
12 Ga0081538_10000016 3300005981 Bacteria 147022
13 Ga0081538_10028847 3300005981 Bacteria 3806
14 Ga0070717_10205063 3300006028 Bacteria 1728
15 Ga0075365_10032606 3300006038 Bacteria 3350
16 Ga0075364_10064266 3300006051 Bacteria 2409
17 Ga0070715_10005623 3300006163 Bacteria 4196
18 Ga0070716_100062761 3300006173 Bacteria 2155
19 Ga0070712_100094590 3300006175 Bacteria 2196
20 Ga0070712_100096730 3300006175 Bacteria 2174
21 Ga0075367_10099874 3300006178 Bacteria 1773
22 Ga0075370_10016689 3300006353 Bacteria 3953
23 Ga0075434_100030146 3300006871 Bacteria 5341
24 Ga0213876_10036683 3300021384 Bacteria 2585
25 Ga0213875_10002422 3300021388 Bacteria 11188
26 Ga0207426_1016148 3300025302 Bacteria 2689
27 Ga0207692_10001625 3300025898 Bacteria 8476
28 Ga0207692_10015198 3300025898 Bacteria 3382
29 Ga0207685_10000084 3300025905 Bacteria 17469
30 Ga0207685_10028973 3300025905 Bacteria 1956
31 Ga0207699_10004982 3300025906 Bacteria 6350
32 Ga0207699_10040661 3300025906 Bacteria 2680
33 Ga0207693_10132687 3300025915 Bacteria 1958
34 Ga0207693_10132944 3300025915 Bacteria 1956
35 Ga0207663_10002342 3300025916 Bacteria 9098
36 Ga0207663_10103434 3300025916 Bacteria 1918
37 Ga0207646_10095546 3300025922 Bacteria 2662
38 Ga0207700_10004729 3300025928 Bacteria 8076
39 Ga0207700_10007267 3300025928 Bacteria 6758
40 Ga0207664_10001469 3300025929 Bacteria 15461
41 Ga0207664_10006181 3300025929 Bacteria 8216
42 Ga0207665_10107328 3300025939 Bacteria 1957
43 Ga0207665_10107459 3300025939 Bacteria 1956
44 Ga0207668_10013992 3300025972 Bacteria 4957
45 Ga0207678_10003523 3300026067 Bacteria 14079
46 Ga0207702_10120963 3300026078 Bacteria 2343
47 Ga0307515_10020243 3300028794 Bacteria 11887
48 Ga0307513_10089052 3300031456 Bacteria 3152
49 Ga0307509_10149481 3300031507 Bacteria 2255
50 Ga0307508_10002588 3300031616 Bacteria 19024
51 Ga0307518_10002006 3300031838 Bacteria 14952
52 Ga0307416_100138194 3300032002 Bacteria 2209
53 Ga0307507_10029505 3300033179 Bacteria 5813
54 Ga0307510_10018502 3300033180 Bacteria 8197
55 Ga0373942_0012588 3300035207 Bacteria 2024
56 Ga0373931_0018099 3300035691 Bacteria 3498
57 Ga0373925_0026479 3300037068 Bacteria 4242
58 Ga0373925_0046090 3300037068 Bacteria 3240
59 Ga0436364_0258924 3300037853 Bacteria 15643
60 Ga0436364_0756637 3300037853 Bacteria 2232
61 Ga0436365_1609392 3300039437 Bacteria 2450
62 Ga0436363_1303088 3300039450 Bacteria 1718
63 Ga0436362_0085941 3300039453 Bacteria 7653
64 Ga0439436_0006037 3300041404 Bacteria 3712
65 Ga0439439_0011246 3300041406 Bacteria 2151
66 Ga0439457_003083 3300042014 Bacteria 4610
67 Ga0466972_0032152 3300044658 Bacteria 2577
68 Ga0466964_0016595 3300044706 Bacteria 2814
69 Ga0466959_0061981 3300045049 Bacteria 2719
70 Ga0466967_0000392 3300045976 Bacteria 20495
71 Ga0466967_0013429 3300045976 Bacteria 6328
72 Ga0466967_0018684 3300045976 Bacteria 5549
73 Ga0495607_0028236 3300046501 Bacteria 3463
74 Ga0495645_0016917 3300046543 Bacteria 5219
75 Ga0495668_0000043 3300046616 Bacteria 227636
76 Ga0495635_0089085 3300046663 Bacteria 2111
77 Ga0495657_0094526 3300046675 Bacteria 1912
78 Ga0495647_0018135 3300046681 Bacteria 2501
79 Ga0495624_0046985 3300046690 Bacteria 2744
80 Ga0495674_0002886 3300047319 Bacteria 16724
81 Ga0495676_0083108 3300047321 Bacteria 2421
82 Ga0495683_0002342 3300047323 Bacteria 11506
83 Ga0495602_0114226 3300048088 Bacteria 2187
84 Ga0496100_0037645 3300048903 Bacteria 3060
85 Ga0496100_0046714 3300048903 Bacteria 2786
86 Ga0496104_0042055 3300048907 Bacteria 4286
87 Ga0496104_0132706 3300048907 Bacteria 2392
88 Ga0496105_0095216 3300048908 Bacteria 2459
89 Ga0496106_0180984 3300048909 Bacteria 1673
90 Ga0496108_0081527 3300048911 Bacteria 2742
91 Ga0496110_0019577 3300048913 Bacteria 5700
92 Ga0496112_0068322 3300048915 Bacteria 3509
93 Ga0496112_0080617 3300048915 Bacteria 3218
94 Ga0496113_0064014 3300048916 Bacteria 2780
95 Ga0496114_0002202 3300048917 Bacteria 14834
96 Ga0496115_0095331 3300048918 Bacteria 2435
97 Ga0496125_0069893 3300048928 Bacteria 2751
98 nmdc:mga0yw44_100323_c1 3300050492 Bacteria 1843
99 nmdc:mga07m45_65265_c1 3300050496 Bacteria 2067
100 nmdc:mga0n895_18195_c1 3300050512 Bacteria 6496
101 nmdc:mga08x19_210996_c1 3300050514 Bacteria 1333
102 Ga0495619_0044702 3300053085 Bacteria 2908
103 Ga0495619_0056617 3300053085 Bacteria 2600
104 Ga0500568_0012132 3300053139 Bacteria 3971
105 2552107622 2551306166 Bacteria 9731570
106 2558910957 2558860112 Bacteria 9931328
107 2566994139 2565956761 Bacteria 6601618
108 2583152072 2582580736 Bacteria 5325865
109 2586064323 2585427649 Bacteria 9053857
110 2738696792 2738541272 Bacteria 6848551
111 2738889841 2738541308 Bacteria 7020677
112 2739324525 2738543027 Bacteria 6409078
113 2739365158 2738543034 Bacteria 6084756
114 2739606572 2739367654 Bacteria 6049412
115 2753038640 2751185725 Bacteria 5740550
116 2753327152 2751185792 Bacteria 5739090
117 2760306633 2758568522 Bacteria 5953541
118 2760624894 2758568621 Bacteria 5967089
119 2776374443 2775506925 Bacteria 7237746
120 2776376226 2775506925 Bacteria 7237746
121 2793975532 2791355406 Bacteria 11364898
122 2809029795 2808606394 Bacteria 6248540
123 2809586427 2808606522 Bacteria 9488490
124 2812355321 2811994879 Bacteria 9313447
125 2837269855 2837268691 Bacteria 7850704
126 2848553766 2848551377 Bacteria 3720646
127 2852638810 2852635781 Bacteria 8251373
128 2863067969 2863067949 Bacteria 8541735
129 2863071994 2863067949 Bacteria 8541735
130 2863074241 2863067949 Bacteria 8541735
131 2866553550 2866552031 Bacteria 5824618
132 2868093338 2868088558 Bacteria 7609351
133 2870789128 2870782633 Bacteria 9624083
134 2887444399 2887443736 Bacteria 4426037
135 2893685933 2893684298 Bacteria 2897960
136 2899362767 2899359706 Bacteria 10940472
137 2899374198 2899370129 Bacteria 6781179
138 2904539907 2904535858 Bacteria 6308016
139 2915775907 2915768154 Bacteria 8424322
140 2917737664 2917736166 Bacteria 9690793
141 2939584845 2939582691 Bacteria 7088898
142 2946070569 2946064051 Bacteria 8957905
143 2947226271 2947224130 Bacteria 9938529
144 2997605294 2997600082 Bacteria 9896405
145 8003323255 8003314358 Bacteria 10575343
146 8047902462 8047893842 Bacteria 11723082
147 8048370258 8048369669 Bacteria 11666822
148 8048389163 8048379754 Bacteria 11877923
149 8056061468 8056060235 Bacteria 7259403
150 8056208128 8056207758 Bacteria 8639239
151 8056582897 8056579771 Bacteria 5840325
152 Ga0070698_100010889
153 JGI25407J50210_10013342
154 Ga0070668_100001165
155 Ga0070709_10020192
156 Ga0070714_100066899
157 Ga0070714_100140209
158 Ga0070713_100023229
159 Ga0070713_100228568
160 Ga0070710_10041208
161 Ga0070711_100056453
162 Ga0070663_100003517
163 Ga0081538_10000016
164 Ga0081538_10028847
165 Ga0070717_10205063
166 Ga0075365_10032606
167 Ga0075364_10064266
168 Ga0070715_10005623
169 Ga0070716_100062761
170 Ga0070712_100094590
171 Ga0070712_100096730
172 Ga0075367_10099874
173 Ga0075370_10016689
174 Ga0075434_100030146
175 Ga0213876_10036683
176 Ga0213875_10002422
177 Ga0207426_1016148
178 Ga0207692_10001625
179 Ga0207692_10015198
180 Ga0207685_10000084
181 Ga0207685_10028973
182 Ga0207699_10004982
183 Ga0207699_10040661
184 Ga0207693_10132687
185 Ga0207693_10132944
186 Ga0207663_10002342
187 Ga0207663_10103434
188 Ga0207646_10095546
189 Ga0207700_10004729
190 Ga0207700_10007267
191 Ga0207664_10001469
192 Ga0207664_10006181
193 Ga0207665_10107328
194 Ga0207665_10107459
195 Ga0207668_10013992
196 Ga0207678_10003523
197 Ga0207702_10120963
198 Ga0307515_10020243
199 Ga0307513_10089052
200 Ga0307509_10149481
201 Ga0307508_10002588
202 Ga0307518_10002006
203 Ga0307416_100138194
204 Ga0307507_10029505
205 Ga0307510_10018502
206 Ga0373942_0012588
207 Ga0373931_0018099
208 Ga0373925_0026479
209 Ga0373925_0046090
210 Ga0436364_0258924
211 Ga0436364_0756637
212 Ga0436365_1609392
213 Ga0436363_1303088
214 Ga0436362_0085941
215 Ga0439436_0006037
216 Ga0439439_0011246
217 Ga0439457_003083
218 Ga0466972_0032152
219 Ga0466964_0016595
220 Ga0466959_0061981
221 Ga0466967_0000392
222 Ga0466967_0013429
223 Ga0466967_0018684
224 Ga0495607_0028236
225 Ga0495645_0016917
226 Ga0495668_0000043
227 Ga0495635_0089085
228 Ga0495657_0094526
229 Ga0495647_0018135
230 Ga0495624_0046985
231 Ga0495674_0002886
232 Ga0495676_0083108
233 Ga0495683_0002342
234 Ga0495602_0114226
235 Ga0496100_0037645
236 Ga0496100_0046714
237 Ga0496104_0042055
238 Ga0496104_0132706
239 Ga0496105_0095216
240 Ga0496106_0180984
241 Ga0496108_0081527
242 Ga0496110_0019577
243 Ga0496112_0068322
244 Ga0496112_0080617
245 Ga0496113_0064014
246 Ga0496114_0002202
247 Ga0496115_0095331
248 Ga0496125_0069893
249 nmdc:mga0yw44_100323_c1
250 nmdc:mga07m45_65265_c1
251 nmdc:mga0n895_18195_c1
252 nmdc:mga08x19_210996_c1
253 Ga0495619_0044702
254 Ga0495619_0056617
255 Ga0500568_0012132
256 2552107622
257 2558910957
258 2566994139
259 2583152072
260 2586064323
261 2738696792
262 2738889841
263 2739324525
264 2739365158
265 2739606572
266 2753038640
267 2753327152
268 2760306633
269 2760624894
270 2776374443
271 2776376226
272 2793975532
273 2809029795
274 2809586427
275 2812355321
276 2837269855
277 2848553766
278 2852638810
279 2863067969
280 2863071994
281 2863074241
282 2866553550
283 2868093338
284 2870789128
285 2887444399
286 2893685933
287 2899362767
288 2899374198
289 2904539907
290 2915775907
291 2917737664
292 2939584845
293 2946070569
294 2947226271
295 2997605294
296 8003323255
297 8047902462
298 8048370258
299 8048389163
300 8056061468
301 8056208128
302 8056582897

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

59

364

0.92

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

79

396

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4rya-assembly1.cif.gz_A crystal structure of abc transporter solute binding protein avi_3567 from agrobacterium vitis s4, target efi-510645, with bound d-mannitol 0.8752 35 415
5iai-assembly1.cif.gz_A crystal structure of abc transporter solute binding protein arad_9887 from agrobacterium radiobacter k84, target efi-510945 in complex with ribitol 0.8015 33 416
4rya-assembly1.cif.gz_A crystal structure of abc transporter solute binding protein avi_3567 from agrobacterium vitis s4, target efi-510645, with bound d-mannitol 0.8013 35 415
8art-assembly1.cif.gz_A abc transporter binding protein male from streptomyces scabiei in complex with maltose 0.7792 36 416
6jaz-assembly1.cif.gz_A crystal structure of abc transporter alpha-glycoside-binding mutant protein w287f in complex with trehalose 0.7787 37 385
ID Description Score Start End Superfamily
4ryaA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9404 35 404 3.40.190.10
4ryaA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9361 35 404 3.40.190.10
5iaiA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8731 33 149 3.40.190.10
4rjzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8619 36 149 3.40.190.10
5ysdB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8595 36 397 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A4R8FX84-F1-model_v4 Extracellular solute-binding protein 0.9254 134 312 GO:0042597
AF-A0A4R8FX84-F1-model_v4 Extracellular solute-binding protein 0.9061 134 312 GO:0042597
AF-A0A7W8XTP5-F1-model_v4 ABC-type glycerol-3-phosphate transport system substrate-binding protein 0.9053 97 306 GO:0042597
AF-X1E6B2-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.8932 54 344
AF-A0A7W8XTP5-F1-model_v4 ABC-type glycerol-3-phosphate transport system substrate-binding protein 0.893 97 306 GO:0042597

Map