F210834

General Info

Members Datasets Scaffolds Average Seq Length
151 101 151 353

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100257096|Ga0070713_1002570962
Length 380
Sequence MGMVRERTSGFVLDQEKSLTKLRLMREQSLNFLRTLVNTPSPVGHEVRGQRVWLEYVKAFAEETFSDAYGNCVAVLNKGGAPKLMLSGHADEIAMAVNYINDDGFIYVRRMGGVDAASTKAQRVVIHARSGPVKGVVGRVAPHLMREEKEPKAPKIHDLFIDIGVRSRAEAEKLVRIGDPITLSDEFDELRGDLVIGRAFDNRIGTFAVAEALRLLKESKVKLHAEICAVSNVQEEVGLLGARQIAYALKPDVALVVDVTHATDYPTVDKPQHGDVKLGKGPTITHGGCNHPEVVVRIEQIAKAKKIGLQHEAMSATSGTDTDAIFWTRGGIASALISLPNRYMHSPIELISLKDLEQIPELLAGFASSLKHGEQFKVKI

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
45 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
46 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
49 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
52 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
57 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
58 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
59 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
60 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
61 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
62 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
63 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
64 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
65 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
66 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
75 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
76 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
77 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
78 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
79 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
80 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
81 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
84 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
85 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
86 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
87 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
88 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.66
Nodule 0
Rhizoplane 0
Rhizosphere 98.01
Stem 0
Stem Tuber 0
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10041577 3300003322 Unclassified 3150
2 rootL2_10104036 3300003322 Bacteria 2774
3 Ga0070690_100221434 3300005330 Bacteria 1326
4 Ga0070666_10062651 3300005335 Bacteria 2520
5 Ga0070689_100186129 3300005340 Bacteria 1689
6 Ga0070713_100257096 3300005436 Unclassified 1595
7 Ga0070681_10068306 3300005458 Bacteria 3521
8 Ga0070679_100344255 3300005530 Bacteria 1439
9 Ga0068853_100175402 3300005539 Unclassified 1941
10 Ga0070686_100083380 3300005544 Unclassified 2122
11 Ga0068855_100008226 3300005563 Bacteria 12611
12 Ga0068855_100159107 3300005563 Bacteria 2565
13 Ga0068855_100180869 3300005563 Unclassified 2384
14 Ga0068855_100620263 3300005563 Bacteria 1164
15 Ga0068857_100001225 3300005577 Bacteria 20006
16 Ga0068856_100007136 3300005614 Bacteria 10899
17 Ga0068856_100075345 3300005614 Unclassified 3342
18 Ga0068856_100428844 3300005614 Unclassified 1342
19 Ga0068859_100137504 3300005617 Unclassified 2517
20 Ga0068859_100284116 3300005617 Archaea 1747
21 Ga0068864_100008919 3300005618 Bacteria 8265
22 Ga0068866_10132103 3300005718 Bacteria 1421
23 Ga0068858_100127531 3300005842 Bacteria 2384
24 Ga0097621_100048645 3300006237 Bacteria 3441
25 Ga0075431_100187917 3300006847 Bacteria 2118
26 Ga0097620_100137504 3300006931 Unclassified 2517
27 Ga0097620_100284117 3300006931 Archaea 1747
28 Ga0075435_100335045 3300007076 Bacteria 1296
29 Ga0105240_10072011 3300009093 Bacteria 4273
30 Ga0111539_10188274 3300009094 Bacteria 2409
31 Ga0111539_10214927 3300009094 Bacteria 2240
32 Ga0105245_10126327 3300009098 Bacteria 2395
33 Ga0105245_10241450 3300009098 Bacteria 1751
34 Ga0105242_10076887 3300009176 Bacteria 2784
35 Ga0105238_10010236 3300009551 Bacteria 9406
36 Ga0105238_10064171 3300009551 Bacteria 3673
37 Ga0105238_10224368 3300009551 Bacteria 1856
38 Ga0105246_10413942 3300011119 Bacteria 1123
39 Ga0157369_10151809 3300013105 Bacteria 2448
40 Ga0157372_10561324 3300013307 Bacteria 1331
41 Ga0157375_10000083 3300013308 Bacteria 94512
42 Ga0163163_10000059 3300014325 Bacteria 123393
43 Ga0163163_10378424 3300014325 Bacteria 1473
44 Ga0207680_10049842 3300025903 Bacteria 2495
45 Ga0207707_10167776 3300025912 Bacteria 1918
46 Ga0207695_10078188 3300025913 Bacteria 3357
47 Ga0207694_10002498 3300025924 Bacteria 14951
48 Ga0207694_10014996 3300025924 Bacteria 5844
49 Ga0207700_10049170 3300025928 Bacteria 3136
50 Ga0207670_10035314 3300025936 Bacteria 3240
51 Ga0207667_10015959 3300025949 Bacteria 8505
52 Ga0207667_10063979 3300025949 Bacteria 3842
53 Ga0207667_10176593 3300025949 Unclassified 2194
54 Ga0207668_10337100 3300025972 Bacteria 1257
55 Ga0207639_10116546 3300026041 Unclassified 2187
56 Ga0207702_10005334 3300026078 Bacteria 11273
57 Ga0207702_10101842 3300026078 Bacteria 2537
58 Ga0207702_10157038 3300026078 Bacteria 2074
59 Ga0207641_10118905 3300026088 Unclassified 2355
60 Ga0207676_10193907 3300026095 Unclassified 1790
61 Ga0207674_10022814 3300026116 Bacteria 6715
62 Ga0265337_1003219 3300028556 Bacteria 7147
63 Ga0265337_1014341 3300028556 Bacteria 2629
64 Ga0265334_10060134 3300028573 Unclassified 1434
65 Ga0265323_10061244 3300028653 Unclassified 1308
66 Ga0265338_10001706 3300028800 Bacteria 34854
67 Ga0265338_10006293 3300028800 Bacteria 15174
68 Ga0265338_10015101 3300028800 Bacteria 8520
69 Ga0265338_10016008 3300028800 Bacteria 8194
70 Ga0265338_10083126 3300028800 Unclassified 2679
71 Ga0265338_10090490 3300028800 Bacteria 2532
72 Ga0265338_10146185 3300028800 Bacteria 1844
73 Ga0265324_10000930 3300029957 Bacteria 18409
74 Ga0265324_10044310 3300029957 Bacteria 1534
75 Ga0265320_10025353 3300031240 Unclassified 3118
76 Ga0265320_10134652 3300031240 Unclassified 1121
77 Ga0265325_10007647 3300031241 Bacteria 6458
78 Ga0265329_10002481 3300031242 Bacteria 8331
79 Ga0265339_10004266 3300031249 Bacteria 9779
80 Ga0265316_10001971 3300031344 Bacteria 21592
81 Ga0265316_10100968 3300031344 Bacteria 2193
82 Ga0265316_10120414 3300031344 Bacteria 1982
83 Ga0265313_10005066 3300031595 Bacteria 9817
84 Ga0265314_10000234 3300031711 Bacteria 82654
85 Ga0373930_0000554 3300034816 Bacteria 5144
86 Ga0373928_0000015 3300035084 Bacteria 30043
87 Ga0373929_0000295 3300035085 Bacteria 9279
88 Ga0373944_0000327 3300035089 Bacteria 10684
89 Ga0373951_0005622 3300035091 Bacteria 2902
90 Ga0373932_0000002 3300035112 Bacteria 711821
91 Ga0373962_0000053 3300035242 Bacteria 25615
92 Ga0316574_0134778 3300035398 Bacteria 1590
93 Ga0373931_0000015 3300035691 Bacteria 236539
94 Ga0373935_0075272 3300035692 Bacteria 2184
95 Ga0373927_0115717 3300035695 Unclassified 1748
96 Ga0316584_0188111 3300036712 Bacteria 1527
97 Ga0373925_0000306 3300037068 Bacteria 51383
98 Ga0373925_0223603 3300037068 Bacteria 1503
99 Ga0451577_0000730 3300042876 Bacteria 50897
100 Ga0451577_0006160 3300042876 Bacteria 12052
101 Ga0451577_0006971 3300042876 Bacteria 11163
102 Ga0451577_0022724 3300042876 Bacteria 5726
103 Ga0453684_0003488 3300044712 Bacteria 35324
104 Ga0453684_0007299 3300044712 Bacteria 20444
105 Ga0453684_0009249 3300044712 Bacteria 17304
106 Ga0453684_0372420 3300044712 Bacteria 1605
107 Ga0451576_0007044 3300045051 Bacteria 13584
108 Ga0451576_0080740 3300045051 Bacteria 3383
109 Ga0451576_0149812 3300045051 Bacteria 2433
110 Ga0451576_0182480 3300045051 Bacteria 2191
111 Ga0466967_0540118 3300045976 Bacteria 1147
112 Ga0495592_0000035 3300046454 Bacteria 125802
113 Ga0495641_0043088 3300046461 Bacteria 2088
114 Ga0495662_0009652 3300046476 Bacteria 4733
115 Ga0495662_0097508 3300046476 Unclassified 1437
116 Ga0495618_0000902 3300046514 Bacteria 20410
117 Ga0495618_0103283 3300046514 Bacteria 1825
118 Ga0495628_0000789 3300046516 Bacteria 29129
119 Ga0495630_0000077 3300046517 Bacteria 76692
120 Ga0495630_0020186 3300046517 Bacteria 4910
121 Ga0495665_0167048 3300046531 Unclassified 1146
122 Ga0495586_0000044 3300046535 Bacteria 74379
123 Ga0495586_0001534 3300046535 Bacteria 12745
124 Ga0495586_0025838 3300046535 Bacteria 3142
125 Ga0495586_0112099 3300046535 Bacteria 1519
126 Ga0495645_0064746 3300046543 Bacteria 2645
127 Ga0495634_0054976 3300046642 Bacteria 2663
128 Ga0495647_0023479 3300046681 Bacteria 2236
129 Ga0495658_0031165 3300046683 Unclassified 2902
130 Ga0495658_0087664 3300046683 Bacteria 1838
131 Ga0495624_0067003 3300046690 Bacteria 2241
132 Ga0495600_0143134 3300046809 Unclassified 1551
133 Ga0495674_0000586 3300047319 Bacteria 34088
134 Ga0495676_0031670 3300047321 Bacteria 4469
135 Ga0495684_0340540 3300047471 Unclassified 1067
136 Ga0501031_0139697 3300049568 Unclassified 1583
137 Ga0501032_0054377 3300049569 Unclassified 2694
138 Ga0501033_0000687 3300049570 Bacteria 31338
139 Ga0501033_0005314 3300049570 Bacteria 10207
140 Ga0501039_0422581 3300049575 Unclassified 1047
141 Ga0501046_0158149 3300049580 Bacteria 1706
142 Ga0501047_0117991 3300049581 Bacteria 2535
143 Ga0501083_0074551 3300049744 Bacteria 2254
144 Ga0501035_0004936 3300049822 Bacteria 12654
145 Ga0501035_0204793 3300049822 Unclassified 1690
146 Ga0501044_0000060 3300049823 Bacteria 133279
147 Ga0501044_0047304 3300049823 Unclassified 4449
148 nmdc:mga08y16_152203_c1 3300050511 Bacteria 2404
149 nmdc:mga08y16_191508_c1 3300050511 Bacteria 2121
150 nmdc:mga0n895_366078_c1 3300050512 Bacteria 1459
151 Ga0500556_0003886 3300053104 Bacteria 4319

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300011119 Ga0105246_10413942 Ga0105246_104139422 296
2 3300028800 Ga0265338_10016008 Ga0265338_100160082 296
3 3300042876 Ga0451577_0000730 Ga0451577_0000730_20237_21127 296
4 3300044712 Ga0453684_0007299 Ga0453684_0007299_6902_7792 296
5 3300049575 Ga0501039_0422581 Ga0501039_0422581_110_1030 306
6 3300045976 Ga0466967_0540118 Ga0466967_0540118_13_1011 320
7 3300046543 Ga0495645_0064746 Ga0495645_0064746_1621_2610 321
8 3300047471 Ga0495684_0340540 Ga0495684_0340540_23_1012 321
9 3300049580 Ga0501046_0158149 Ga0501046_0158149_359_1348 329
10 3300005563 Ga0068855_100620263 Ga0068855_1006202631 334
11 3300005617 Ga0068859_100137504 Ga0068859_1001375042 334
12 3300006931 Ga0097620_100137504 Ga0097620_1001375042 334
13 3300025936 Ga0207670_10035314 Ga0207670_100353143 334
14 3300046514 Ga0495618_0103283 Ga0495618_0103283_771_1808 345
15 3300046809 Ga0495600_0143134 Ga0495600_0143134_37_1107 348
16 3300042876 Ga0451577_0006160 Ga0451577_0006160_1511_2578 355
17 3300044712 Ga0453684_0003488 Ga0453684_0003488_24515_25582 355
18 3300003322 rootL2_10104036 rootL2_101040364 356
19 3300005330 Ga0070690_100221434 Ga0070690_1002214341 356
20 3300005335 Ga0070666_10062651 Ga0070666_100626511 356
21 3300005340 Ga0070689_100186129 Ga0070689_1001861291 356
22 3300005436 Ga0070713_100257096 Ga0070713_1002570962 356
23 3300005458 Ga0070681_10068306 Ga0070681_100683063 356
24 3300005530 Ga0070679_100344255 Ga0070679_1003442552 356
25 3300005539 Ga0068853_100175402 Ga0068853_1001754021 356
26 3300005544 Ga0070686_100083380 Ga0070686_1000833802 356
27 3300005563 Ga0068855_100008226 Ga0068855_1000082269 356
28 3300005563 Ga0068855_100159107 Ga0068855_1001591072 356
29 3300005563 Ga0068855_100180869 Ga0068855_1001808692 356
30 3300005577 Ga0068857_100001225 Ga0068857_1000012258 356
31 3300005614 Ga0068856_100007136 Ga0068856_1000071362 356
32 3300005614 Ga0068856_100075345 Ga0068856_1000753452 356
33 3300005614 Ga0068856_100428844 Ga0068856_1004288441 356
34 3300005617 Ga0068859_100284116 Ga0068859_1002841161 356
35 3300005618 Ga0068864_100008919 Ga0068864_1000089193 356
36 3300005718 Ga0068866_10132103 Ga0068866_101321031 356
37 3300005842 Ga0068858_100127531 Ga0068858_1001275313 356
38 3300006237 Ga0097621_100048645 Ga0097621_1000486452 356
39 3300006847 Ga0075431_100187917 Ga0075431_1001879173 356
40 3300006931 Ga0097620_100284117 Ga0097620_1002841171 356
41 3300007076 Ga0075435_100335045 Ga0075435_1003350451 356
42 3300009093 Ga0105240_10072011 Ga0105240_100720111 356
43 3300009094 Ga0111539_10188274 Ga0111539_101882741 356
44 3300009094 Ga0111539_10214927 Ga0111539_102149272 356
45 3300009098 Ga0105245_10126327 Ga0105245_101263271 356
46 3300009098 Ga0105245_10241450 Ga0105245_102414502 356
47 3300009176 Ga0105242_10076887 Ga0105242_100768872 356
48 3300009551 Ga0105238_10010236 Ga0105238_100102366 356
49 3300009551 Ga0105238_10064171 Ga0105238_100641713 356
50 3300009551 Ga0105238_10224368 Ga0105238_102243683 356
51 3300013105 Ga0157369_10151809 Ga0157369_101518093 356
52 3300013307 Ga0157372_10561324 Ga0157372_105613241 356
53 3300013308 Ga0157375_10000083 Ga0157375_1000008372 356
54 3300014325 Ga0163163_10000059 Ga0163163_1000005976 356
55 3300014325 Ga0163163_10378424 Ga0163163_103784242 356
56 3300025903 Ga0207680_10049842 Ga0207680_100498421 356
57 3300025912 Ga0207707_10167776 Ga0207707_101677761 356
58 3300025913 Ga0207695_10078188 Ga0207695_100781883 356
59 3300025924 Ga0207694_10002498 Ga0207694_1000249810 356
60 3300025924 Ga0207694_10014996 Ga0207694_100149966 356
61 3300025928 Ga0207700_10049170 Ga0207700_100491704 356
62 3300025949 Ga0207667_10015959 Ga0207667_100159596 356
63 3300025949 Ga0207667_10063979 Ga0207667_100639792 356
64 3300025949 Ga0207667_10176593 Ga0207667_101765932 356
65 3300025972 Ga0207668_10337100 Ga0207668_103371001 356
66 3300026041 Ga0207639_10116546 Ga0207639_101165463 356
67 3300026078 Ga0207702_10005334 Ga0207702_100053342 356
68 3300026078 Ga0207702_10101842 Ga0207702_101018422 356
69 3300026078 Ga0207702_10157038 Ga0207702_101570382 356
70 3300026088 Ga0207641_10118905 Ga0207641_101189053 356
71 3300026095 Ga0207676_10193907 Ga0207676_101939071 356
72 3300026116 Ga0207674_10022814 Ga0207674_100228148 356
73 3300028556 Ga0265337_1003219 Ga0265337_10032192 356
74 3300028556 Ga0265337_1014341 Ga0265337_10143413 356
75 3300028573 Ga0265334_10060134 Ga0265334_100601341 356
76 3300028653 Ga0265323_10061244 Ga0265323_100612441 356
77 3300028800 Ga0265338_10001706 Ga0265338_1000170611 356
78 3300028800 Ga0265338_10006293 Ga0265338_100062934 356
79 3300028800 Ga0265338_10015101 Ga0265338_100151014 356
80 3300028800 Ga0265338_10083126 Ga0265338_100831262 356
81 3300028800 Ga0265338_10090490 Ga0265338_100904902 356
82 3300028800 Ga0265338_10146185 Ga0265338_101461852 356
83 3300029957 Ga0265324_10000930 Ga0265324_100009304 356
84 3300029957 Ga0265324_10044310 Ga0265324_100443102 356
85 3300031240 Ga0265320_10025353 Ga0265320_100253533 356
86 3300031240 Ga0265320_10134652 Ga0265320_101346521 356
87 3300031241 Ga0265325_10007647 Ga0265325_100076473 356
88 3300031242 Ga0265329_10002481 Ga0265329_100024812 356
89 3300031249 Ga0265339_10004266 Ga0265339_100042663 356
90 3300031344 Ga0265316_10001971 Ga0265316_100019717 356
91 3300031344 Ga0265316_10100968 Ga0265316_101009682 356
92 3300031344 Ga0265316_10120414 Ga0265316_101204143 356
93 3300031595 Ga0265313_10005066 Ga0265313_100050663 356
94 3300031711 Ga0265314_10000234 Ga0265314_1000023410 356
95 3300034816 Ga0373930_0000554 Ga0373930_0000554_2142_3212 356
96 3300035084 Ga0373928_0000015 Ga0373928_0000015_19533_20603 356
97 3300035085 Ga0373929_0000295 Ga0373929_0000295_3693_4763 356
98 3300035089 Ga0373944_0000327 Ga0373944_0000327_7083_8153 356
99 3300035091 Ga0373951_0005622 Ga0373951_0005622_56_1126 356
100 3300035112 Ga0373932_0000002 Ga0373932_0000002_364124_365194 356
101 3300035242 Ga0373962_0000053 Ga0373962_0000053_17553_18623 356
102 3300035398 Ga0316574_0134778 Ga0316574_0134778_39_1109 356
103 3300035691 Ga0373931_0000015 Ga0373931_0000015_96535_97605 356
104 3300035692 Ga0373935_0075272 Ga0373935_0075272_294_1364 356
105 3300035695 Ga0373927_0115717 Ga0373927_0115717_476_1546 356
106 3300036712 Ga0316584_0188111 Ga0316584_0188111_438_1508 356
107 3300037068 Ga0373925_0000306 Ga0373925_0000306_15744_16814 356
108 3300037068 Ga0373925_0223603 Ga0373925_0223603_371_1441 356
109 3300042876 Ga0451577_0006971 Ga0451577_0006971_3796_4866 356
110 3300042876 Ga0451577_0022724 Ga0451577_0022724_4378_5448 356
111 3300044712 Ga0453684_0009249 Ga0453684_0009249_7518_8588 356
112 3300044712 Ga0453684_0372420 Ga0453684_0372420_397_1467 356
113 3300045051 Ga0451576_0007044 Ga0451576_0007044_4249_5328 356
114 3300045051 Ga0451576_0080740 Ga0451576_0080740_433_1506 356
115 3300045051 Ga0451576_0149812 Ga0451576_0149812_741_1811 356
116 3300045051 Ga0451576_0182480 Ga0451576_0182480_820_1890 356
117 3300046454 Ga0495592_0000035 Ga0495592_0000035_32829_33899 356
118 3300046461 Ga0495641_0043088 Ga0495641_0043088_855_1925 356
119 3300046476 Ga0495662_0009652 Ga0495662_0009652_3561_4631 356
120 3300046476 Ga0495662_0097508 Ga0495662_0097508_262_1332 356
121 3300046514 Ga0495618_0000902 Ga0495618_0000902_15830_16900 356
122 3300046516 Ga0495628_0000789 Ga0495628_0000789_2428_3498 356
123 3300046517 Ga0495630_0000077 Ga0495630_0000077_32074_33144 356
124 3300046517 Ga0495630_0020186 Ga0495630_0020186_2072_3142 356
125 3300046531 Ga0495665_0167048 Ga0495665_0167048_35_1105 356
126 3300046535 Ga0495586_0000044 Ga0495586_0000044_29714_30784 356
127 3300046535 Ga0495586_0001534 Ga0495586_0001534_7686_8756 356
128 3300046535 Ga0495586_0025838 Ga0495586_0025838_30_1100 356
129 3300046535 Ga0495586_0112099 Ga0495586_0112099_33_1103 356
130 3300046642 Ga0495634_0054976 Ga0495634_0054976_344_1414 356
131 3300046681 Ga0495647_0023479 Ga0495647_0023479_235_1305 356
132 3300046683 Ga0495658_0031165 Ga0495658_0031165_1469_2539 356
133 3300046683 Ga0495658_0087664 Ga0495658_0087664_591_1661 356
134 3300046690 Ga0495624_0067003 Ga0495624_0067003_226_1296 356
135 3300047319 Ga0495674_0000586 Ga0495674_0000586_27833_28903 356
136 3300047321 Ga0495676_0031670 Ga0495676_0031670_1790_2860 356
137 3300049568 Ga0501031_0139697 Ga0501031_0139697_251_1321 356
138 3300049569 Ga0501032_0054377 Ga0501032_0054377_237_1307 356
139 3300049570 Ga0501033_0000687 Ga0501033_0000687_6644_7714 356
140 3300049570 Ga0501033_0005314 Ga0501033_0005314_1890_2960 356
141 3300049581 Ga0501047_0117991 Ga0501047_0117991_824_1894 356
142 3300049744 Ga0501083_0074551 Ga0501083_0074551_291_1361 356
143 3300049822 Ga0501035_0004936 Ga0501035_0004936_8055_9125 356
144 3300049822 Ga0501035_0204793 Ga0501035_0204793_265_1335 356
145 3300049823 Ga0501044_0000060 Ga0501044_0000060_13124_14194 356
146 3300049823 Ga0501044_0047304 Ga0501044_0047304_93_1163 356
147 3300050511 nmdc:mga08y16_152203_c1 nmdc:mga08y16_152203_c1_913_1983 356
148 3300050511 nmdc:mga08y16_191508_c1 nmdc:mga08y16_191508_c1_681_1751 356
149 3300050512 nmdc:mga0n895_366078_c1 nmdc:mga0n895_366078_c1_154_1224 356
150 3300003322 rootL2_10041577 rootL2_100415771 357
151 3300053104 Ga0500556_0003886 Ga0500556_0003886_2810_3883 357

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05343

Peptidase_M42

M42 glutamyl aminopeptidase

70

362

0.96

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

182

369

0.8

PF04389

Peptidase_M28

Peptidase family M28

187

359

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pe3-assembly1.cif.gz_A crystal structure of frv operon protein frvx (ph1821)from pyrococcus horikoshii ot3 0.921 6 351
4x8i-assembly1.cif.gz_B de novo crystal structure of the pyrococcus furiosus tet3 aminopeptidase 0.9136 1 351
4x8i-assembly1.cif.gz_A de novo crystal structure of the pyrococcus furiosus tet3 aminopeptidase 0.9128 1 354
2pe3-assembly1.cif.gz_B crystal structure of frv operon protein frvx (ph1821)from pyrococcus horikoshii ot3 0.9119 6 351
4x8i-assembly1.cif.gz_A de novo crystal structure of the pyrococcus furiosus tet3 aminopeptidase 0.9103 1 354
ID Description Score Start End Superfamily
af_P39366_72_164_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9694 71 160 3.40.630.10
2pe3C02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Peptidase M42, domain 2 0.9497 71 160 2.40.30.40
af_Q57975_67_159_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9491 71 160 3.40.630.10
2wyrC02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Peptidase M42, domain 2 0.9351 71 160 2.40.30.40
2fvgA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Peptidase M42, domain 2 0.9342 71 160 2.40.30.40
ID Description Score Start End GO Terms
AF-A0A535BZF2-F1-model_v4 M42 family metallopeptidase 0.9703 29 291 GO:0004177
GO:0006508
GO:0046872
AF-A0A2W6AIW5-F1-model_v4 M42 family peptidase 0.9571 1 354 GO:0004177
GO:0006508
GO:0046872
AF-A0A535IG36-F1-model_v4 M42 family metallopeptidase 0.9538 1 269 GO:0004177
GO:0006508
GO:0046872
AF-A0A349VIJ6-F1-model_v4 Hydrolase 0.9535 1 275 GO:0004177
GO:0006508
GO:0046872
AF-A0A0S7XLJ1-F1-model_v4 Hydrolase 0.9532 1 354 GO:0004177
GO:0006508
GO:0046872

Feature Viewer

pLDDT pTM Quality
86.84 0.89 High
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Predicted Structure (AlphaFold2)

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