F209522

General Info

Members Datasets Scaffolds Average Seq Length
150 95 149 207

Family's Representative Sequence

Representative Sequence 3300044684|Ga0466966_0072203|Ga0466966_0072203_421_1095
Length 224
Sequence MSRAPSIGVIDYGMGNRRSVQKGLERVGAVAPVSRDEAVLRRCQGLVLPGVGAFPLAMRNLRELGLDDLIRSRIADGVPLLGICLGMQLLFERSEELEPTPGLGALPGIVTRIEAPGLTIPHIGWNEVRWERDSPLTDGLPGGSSPFYHVHSYAARPAAQGDVVGTTEYGERFATVVERGAVFGVQFHPEKSSRHGLELLGNFVRLCADGGGEQVSTASLAARG

Samples

Sample ID Description Type Environment
1 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
30 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
58 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
59 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
65 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
66 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
67 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
68 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
74 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
86 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
92 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
93 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
94 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
95 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.33
Metatranscriptomes 0
Isolates 0.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.67
Nodule 0
Rhizoplane 1.33
Rhizosphere 85.33
Stem 0
Stem Tuber 0
Unclassified 12.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100228113 3300005329 Bacteria 1770
2 Ga0068868_100335323 3300005338 Bacteria 1292
3 Ga0070689_100073143 3300005340 Bacteria 2680
4 Ga0070668_100346693 3300005347 Bacteria 1256
5 Ga0070674_100056248 3300005356 Bacteria 2728
6 Ga0070714_100179411 3300005435 Bacteria 1926
7 Ga0070714_100258156 3300005435 Bacteria 1613
8 Ga0070714_100435516 3300005435 Bacteria 1243
9 Ga0070713_100364563 3300005436 Bacteria 1343
10 Ga0070710_10221408 3300005437 Bacteria 1204
11 Ga0070711_100649790 3300005439 Bacteria 884
12 Ga0070700_100034667 3300005441 Bacteria 3049
13 Ga0070662_100280692 3300005457 Bacteria 1348
14 Ga0070684_100072641 3300005535 Bacteria 3029
15 Ga0070684_100888792 3300005535 Bacteria 834
16 Ga0070665_100457903 3300005548 Bacteria 1286
17 Ga0070664_100179456 3300005564 Bacteria 1881
18 Ga0068856_100162843 3300005614 Bacteria 2242
19 Ga0068852_100420801 3300005616 Bacteria 1318
20 Ga0068861_100153857 3300005719 Bacteria 1890
21 Ga0068851_10288809 3300005834 Bacteria 940
22 Ga0068862_100510999 3300005844 Bacteria 1142
23 Ga0081455_10294839 3300005937 Bacteria 1166
24 Ga0075436_100160638 3300006914 Bacteria 1584
25 Ga0075435_101049539 3300007076 Bacteria 712
26 Ga0105245_10066571 3300009098 Bacteria 3261
27 Ga0105243_10468533 3300009148 Bacteria 1186
28 Ga0163162_10846053 3300013306 Bacteria 1030
29 Ga0163163_10652912 3300014325 Bacteria 1115
30 Ga0157380_10143041 3300014326 Bacteria 2058
31 Ga0157377_10549556 3300014745 Bacteria 815
32 Ga0213874_10000133 3300021377 Bacteria 12605
33 Ga0213876_10024394 3300021384 Bacteria 3193
34 Ga0213876_10035322 3300021384 Bacteria 2636
35 Ga0213876_10043842 3300021384 Bacteria 2364
36 Ga0213876_10053480 3300021384 Bacteria 2133
37 Ga0209784_102668 3300025224 Bacteria 1724
38 Ga0207660_10757058 3300025917 Bacteria 793
39 Ga0207662_10210898 3300025918 Bacteria 1261
40 Ga0207681_10152625 3300025923 Bacteria 1733
41 Ga0207650_10265635 3300025925 Bacteria 1393
42 Ga0207687_10069563 3300025927 Bacteria 2511
43 Ga0207706_10262018 3300025933 Bacteria 1509
44 Ga0207709_10295435 3300025935 Bacteria 1202
45 Ga0207669_10342048 3300025937 Bacteria 1153
46 Ga0207661_10371795 3300025944 Bacteria 1292
47 Ga0207661_10738797 3300025944 Bacteria 906
48 Ga0207677_10209305 3300026023 Bacteria 1556
49 Ga0207708_10011942 3300026075 Bacteria 6469
50 Ga0207702_10031262 3300026078 Bacteria 4437
51 Ga0207702_10644582 3300026078 Bacteria 1041
52 Ga0207648_10331086 3300026089 Bacteria 1370
53 Ga0207674_10491934 3300026116 Bacteria 1185
54 Ga0207675_100033107 3300026118 Bacteria 4816
55 Ga0207683_10362222 3300026121 Bacteria 1332
56 Ga0207698_10342103 3300026142 Bacteria 1409
57 Ga0268265_10204758 3300028380 Bacteria 1715
58 Ga0307407_10362164 3300031903 Bacteria 1030
59 Ga0307409_100727653 3300031995 Bacteria 994
60 Ga0395900_0496930 3300037418 Bacteria 1171
61 Ga0395898_0002006 3300037466 Bacteria 25548
62 Ga0395898_0986390 3300037466 Bacteria 779
63 Ga0436364_0399660 3300037853 Bacteria 3791
64 Ga0436364_1235831 3300037853 Bacteria 2891
65 Ga0436364_1321688 3300037853 Bacteria 800
66 Ga0436365_0367556 3300039437 Bacteria 5407
67 Ga0436365_0404151 3300039437 Bacteria 4380
68 Ga0436365_0422673 3300039437 Bacteria 5482
69 Ga0436365_0591948 3300039437 Bacteria 1911
70 Ga0436365_1681994 3300039437 Bacteria 5002
71 Ga0436365_1702970 3300039437 Bacteria 5677
72 Ga0436363_0452637 3300039450 Bacteria 3231
73 Ga0436363_0530695 3300039450 Bacteria 8499
74 Ga0436363_1301125 3300039450 Bacteria 33245
75 Ga0436363_1713166 3300039450 Bacteria 4258
76 Ga0436362_0465062 3300039453 Bacteria 1838
77 Ga0466969_0026853 3300044656 Bacteria 2951
78 Ga0466965_0267189 3300044683 Unclassified 921
79 Ga0466966_0072203 3300044684 Bacteria 2162
80 Ga0466966_0072841 3300044684 Bacteria 2150
81 Ga0466966_0079292 3300044684 Bacteria 2047
82 Ga0466966_0090855 3300044684 Bacteria 1896
83 Ga0466966_0107237 3300044684 Bacteria 1724
84 Ga0466966_0251314 3300044684 Bacteria 1065
85 Ga0466961_0067519 3300044693 Bacteria 2271
86 Ga0466961_0291049 3300044693 Bacteria 999
87 Ga0466963_0003247 3300044694 Bacteria 9262
88 Ga0466963_0066937 3300044694 Bacteria 2410
89 Ga0466963_0088668 3300044694 Bacteria 2104
90 Ga0466963_0120030 3300044694 Bacteria 1808
91 Ga0466963_0236288 3300044694 Bacteria 1281
92 Ga0466963_0251045 3300044694 Bacteria 1241
93 Ga0466963_0458461 3300044694 Bacteria 900
94 Ga0466964_0091450 3300044706 Bacteria 1325
95 Ga0466964_0124282 3300044706 Bacteria 1167
96 Ga0466964_0232366 3300044706 Bacteria 901
97 Ga0466971_0020737 3300044719 Bacteria 2921
98 Ga0466971_0042176 3300044719 Bacteria 2050
99 Ga0466971_0238879 3300044719 Bacteria 864
100 Ga0466971_0326039 3300044719 Bacteria 740
101 Ga0466968_0049762 3300044735 Bacteria 1786
102 Ga0466968_0096691 3300044735 Bacteria 1315
103 Ga0466968_0372396 3300044735 Bacteria 697
104 Ga0466970_0432919 3300044765 Bacteria 753
105 Ga0466957_0245781 3300044842 Bacteria 1188
106 Ga0466957_0356432 3300044842 Bacteria 993
107 Ga0466960_0216646 3300044901 Bacteria 1052
108 Ga0466960_0498807 3300044901 Bacteria 713
109 Ga0466959_0014287 3300045049 Bacteria 5763
110 Ga0466959_0040583 3300045049 Bacteria 3438
111 Ga0466959_0048907 3300045049 Bacteria 3107
112 Ga0466959_0117863 3300045049 Bacteria 1890
113 Ga0466959_0158914 3300045049 Bacteria 1589
114 Ga0466958_0004697 3300045836 Bacteria 7251
115 Ga0466958_0068185 3300045836 Bacteria 2174
116 Ga0466958_0137732 3300045836 Bacteria 1536
117 Ga0466958_0167229 3300045836 Bacteria 1392
118 Ga0466958_0204096 3300045836 Bacteria 1258
119 Ga0466967_0023219 3300045976 Bacteria 5079
120 Ga0466967_0031554 3300045976 Bacteria 4462
121 Ga0466967_0036059 3300045976 Bacteria 4219
122 Ga0466967_0097117 3300045976 Bacteria 2689
123 Ga0466967_0335681 3300045976 Bacteria 1460
124 Ga0466967_0398339 3300045976 Bacteria 1339
125 Ga0466967_0870688 3300045976 Bacteria 895
126 Ga0495629_0497085 3300046459 Bacteria 823
127 Ga0495608_0000007 3300046511 Bacteria 313495
128 Ga0495628_0001027 3300046516 Bacteria 25537
129 Ga0495602_0005656 3300048088 Bacteria 13105
130 Ga0496108_0719509 3300048911 Bacteria 865
131 Ga0496113_0187403 3300048916 Bacteria 1642
132 Ga0501032_0667174 3300049569 Bacteria 660
133 Ga0501036_0161191 3300049572 Bacteria 1891
134 Ga0501039_0016303 3300049575 Bacteria 5693
135 Ga0501041_0073997 3300049577 Bacteria 2093
136 Ga0501042_0092955 3300049578 Bacteria 2166
137 Ga0501046_0326820 3300049580 Bacteria 1117
138 Ga0501068_0272813 3300049584 Bacteria 1080
139 Ga0501071_0053674 3300049587 Bacteria 2907
140 Ga0501080_0461229 3300049742 Bacteria 1138
141 Ga0501035_0666396 3300049822 Bacteria 842
142 Ga0501044_0433574 3300049823 Bacteria 1223
143 Ga0501045_0271709 3300049824 Bacteria 1262
144 nmdc:mga08y16_184669_c1 3300050511 Bacteria 2164
145 nmdc:mga0rr50_976221_c1 3300050513 Bacteria 722
146 nmdc:mga08x19_85964_c1 3300050514 Bacteria 2070
147 Ga0495619_0506272 3300053085 Bacteria 830
148 Ga0466962_0009588 3300061719 Bacteria 4644
149 Ga0466962_0086446 3300061719 Bacteria 1501

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005436 Ga0070713_100364563 Ga0070713_1003645632 179
2 3300039437 Ga0436365_0404151 Ga0436365_0404151_2666_3274 190
3 3300044683 Ga0466965_0267189 Ga0466965_0267189_293_898 190
4 3300044693 Ga0466961_0067519 Ga0466961_0067519_698_1303 190
5 3300045049 Ga0466959_0014287 Ga0466959_0014287_962_1567 190
6 3300005435 Ga0070714_100258156 Ga0070714_1002581562 192
7 3300005435 Ga0070714_100435516 Ga0070714_1004355162 192
8 3300005437 Ga0070710_10221408 Ga0070710_102214081 192
9 3300006914 Ga0075436_100160638 Ga0075436_1001606382 192
10 3300050514 nmdc:mga08x19_85964_c1 nmdc:mga08x19_85964_c1_869_1462 192
11 iso_pu_bacteria 2929206907 2929207192 193
12 3300049569 Ga0501032_0667174 Ga0501032_0667174_39_644 195
13 3300049572 Ga0501036_0161191 Ga0501036_0161191_498_1097 195
14 3300049575 Ga0501039_0016303 Ga0501039_0016303_277_876 195
15 3300049577 Ga0501041_0073997 Ga0501041_0073997_1001_1600 195
16 3300049578 Ga0501042_0092955 Ga0501042_0092955_763_1362 195
17 3300049580 Ga0501046_0326820 Ga0501046_0326820_31_630 195
18 3300049584 Ga0501068_0272813 Ga0501068_0272813_36_641 195
19 3300049587 Ga0501071_0053674 Ga0501071_0053674_424_1023 195
20 3300049742 Ga0501080_0461229 Ga0501080_0461229_478_1077 195
21 3300049822 Ga0501035_0666396 Ga0501035_0666396_93_692 195
22 3300049823 Ga0501044_0433574 Ga0501044_0433574_149_748 195
23 3300049824 Ga0501045_0271709 Ga0501045_0271709_243_842 195
24 3300005340 Ga0070689_100073143 Ga0070689_1000731432 197
25 3300005356 Ga0070674_100056248 Ga0070674_1000562483 197
26 3300005548 Ga0070665_100457903 Ga0070665_1004579032 197
27 3300005937 Ga0081455_10294839 Ga0081455_102948392 197
28 3300025224 Ga0209784_102668 Ga0209784_1026682 197
29 3300044735 Ga0466968_0096691 Ga0466968_0096691_491_1123 197
30 3300045049 Ga0466959_0048907 Ga0466959_0048907_1962_2594 197
31 3300046511 Ga0495608_0000007 Ga0495608_0000007_8785_9417 197
32 3300046516 Ga0495628_0001027 Ga0495628_0001027_17205_17831 197
33 3300048088 Ga0495602_0005656 Ga0495602_0005656_6416_7042 197
34 3300005329 Ga0070683_100228113 Ga0070683_1002281133 198
35 3300005338 Ga0068868_100335323 Ga0068868_1003353232 198
36 3300005347 Ga0070668_100346693 Ga0070668_1003466932 198
37 3300005435 Ga0070714_100179411 Ga0070714_1001794113 198
38 3300005439 Ga0070711_100649790 Ga0070711_1006497902 198
39 3300005441 Ga0070700_100034667 Ga0070700_1000346673 198
40 3300005457 Ga0070662_100280692 Ga0070662_1002806922 198
41 3300005535 Ga0070684_100072641 Ga0070684_1000726415 198
42 3300005535 Ga0070684_100888792 Ga0070684_1008887922 198
43 3300005564 Ga0070664_100179456 Ga0070664_1001794562 198
44 3300005614 Ga0068856_100162843 Ga0068856_1001628433 198
45 3300005616 Ga0068852_100420801 Ga0068852_1004208012 198
46 3300005719 Ga0068861_100153857 Ga0068861_1001538572 198
47 3300005834 Ga0068851_10288809 Ga0068851_102888091 198
48 3300005844 Ga0068862_100510999 Ga0068862_1005109992 198
49 3300007076 Ga0075435_101049539 Ga0075435_1010495391 198
50 3300009098 Ga0105245_10066571 Ga0105245_100665713 198
51 3300009148 Ga0105243_10468533 Ga0105243_104685332 198
52 3300013306 Ga0163162_10846053 Ga0163162_108460532 198
53 3300014325 Ga0163163_10652912 Ga0163163_106529121 198
54 3300014326 Ga0157380_10143041 Ga0157380_101430413 198
55 3300014745 Ga0157377_10549556 Ga0157377_105495561 198
56 3300021377 Ga0213874_10000133 Ga0213874_100001334 198
57 3300021384 Ga0213876_10024394 Ga0213876_100243943 198
58 3300021384 Ga0213876_10035322 Ga0213876_100353221 198
59 3300021384 Ga0213876_10043842 Ga0213876_100438422 198
60 3300021384 Ga0213876_10053480 Ga0213876_100534802 198
61 3300025917 Ga0207660_10757058 Ga0207660_107570581 198
62 3300025918 Ga0207662_10210898 Ga0207662_102108982 198
63 3300025923 Ga0207681_10152625 Ga0207681_101526253 198
64 3300025925 Ga0207650_10265635 Ga0207650_102656352 198
65 3300025927 Ga0207687_10069563 Ga0207687_100695635 198
66 3300025933 Ga0207706_10262018 Ga0207706_102620182 198
67 3300025935 Ga0207709_10295435 Ga0207709_102954352 198
68 3300025937 Ga0207669_10342048 Ga0207669_103420482 198
69 3300025944 Ga0207661_10371795 Ga0207661_103717952 198
70 3300025944 Ga0207661_10738797 Ga0207661_107387972 198
71 3300026023 Ga0207677_10209305 Ga0207677_102093052 198
72 3300026075 Ga0207708_10011942 Ga0207708_100119428 198
73 3300026078 Ga0207702_10031262 Ga0207702_100312623 198
74 3300026078 Ga0207702_10644582 Ga0207702_106445822 198
75 3300026089 Ga0207648_10331086 Ga0207648_103310862 198
76 3300026116 Ga0207674_10491934 Ga0207674_104919342 198
77 3300026118 Ga0207675_100033107 Ga0207675_1000331072 198
78 3300026121 Ga0207683_10362222 Ga0207683_103622222 198
79 3300026142 Ga0207698_10342103 Ga0207698_103421032 198
80 3300028380 Ga0268265_10204758 Ga0268265_102047582 198
81 3300031903 Ga0307407_10362164 Ga0307407_103621642 198
82 3300031995 Ga0307409_100727653 Ga0307409_1007276532 198
83 3300037418 Ga0395900_0496930 Ga0395900_0496930_419_1024 198
84 3300037466 Ga0395898_0002006 Ga0395898_0002006_2439_3098 198
85 3300037466 Ga0395898_0986390 Ga0395898_0986390_43_648 198
86 3300037853 Ga0436364_0399660 Ga0436364_0399660_2074_2715 198
87 3300037853 Ga0436364_1235831 Ga0436364_1235831_1551_2189 198
88 3300037853 Ga0436364_1321688 Ga0436364_1321688_127_786 198
89 3300039437 Ga0436365_0367556 Ga0436365_0367556_1758_2408 198
90 3300039437 Ga0436365_0422673 Ga0436365_0422673_2754_3395 198
91 3300039437 Ga0436365_0591948 Ga0436365_0591948_435_1073 198
92 3300039437 Ga0436365_1681994 Ga0436365_1681994_3383_4045 198
93 3300039437 Ga0436365_1702970 Ga0436365_1702970_1500_2138 198
94 3300039450 Ga0436363_0452637 Ga0436363_0452637_1921_2559 198
95 3300039450 Ga0436363_0530695 Ga0436363_0530695_6764_7402 198
96 3300039450 Ga0436363_1301125 Ga0436363_1301125_21918_22580 198
97 3300039450 Ga0436363_1713166 Ga0436363_1713166_1277_1915 198
98 3300039453 Ga0436362_0465062 Ga0436362_0465062_105_767 198
99 3300044656 Ga0466969_0026853 Ga0466969_0026853_168_827 198
100 3300044684 Ga0466966_0072203 Ga0466966_0072203_421_1095 198
101 3300044684 Ga0466966_0072841 Ga0466966_0072841_648_1307 198
102 3300044684 Ga0466966_0079292 Ga0466966_0079292_1219_1869 198
103 3300044684 Ga0466966_0090855 Ga0466966_0090855_1004_1651 198
104 3300044684 Ga0466966_0107237 Ga0466966_0107237_839_1471 198
105 3300044684 Ga0466966_0251314 Ga0466966_0251314_207_854 198
106 3300044693 Ga0466961_0291049 Ga0466961_0291049_292_939 198
107 3300044694 Ga0466963_0003247 Ga0466963_0003247_2334_2975 198
108 3300044694 Ga0466963_0066937 Ga0466963_0066937_430_1035 198
109 3300044694 Ga0466963_0088668 Ga0466963_0088668_943_1548 198
110 3300044694 Ga0466963_0120030 Ga0466963_0120030_1047_1688 198
111 3300044694 Ga0466963_0236288 Ga0466963_0236288_296_949 198
112 3300044694 Ga0466963_0251045 Ga0466963_0251045_622_1227 198
113 3300044694 Ga0466963_0458461 Ga0466963_0458461_91_696 198
114 3300044706 Ga0466964_0091450 Ga0466964_0091450_55_660 198
115 3300044706 Ga0466964_0124282 Ga0466964_0124282_347_1000 198
116 3300044706 Ga0466964_0232366 Ga0466964_0232366_89_694 198
117 3300044719 Ga0466971_0020737 Ga0466971_0020737_715_1365 198
118 3300044719 Ga0466971_0042176 Ga0466971_0042176_1239_1844 198
119 3300044719 Ga0466971_0238879 Ga0466971_0238879_248_853 198
120 3300044719 Ga0466971_0326039 Ga0466971_0326039_73_678 198
121 3300044735 Ga0466968_0049762 Ga0466968_0049762_263_922 198
122 3300044735 Ga0466968_0372396 Ga0466968_0372396_57_662 198
123 3300044765 Ga0466970_0432919 Ga0466970_0432919_36_680 198
124 3300044842 Ga0466957_0245781 Ga0466957_0245781_166_837 198
125 3300044842 Ga0466957_0356432 Ga0466957_0356432_147_752 198
126 3300044901 Ga0466960_0216646 Ga0466960_0216646_363_968 198
127 3300044901 Ga0466960_0498807 Ga0466960_0498807_16_621 198
128 3300045049 Ga0466959_0040583 Ga0466959_0040583_2383_3030 198
129 3300045049 Ga0466959_0117863 Ga0466959_0117863_1194_1841 198
130 3300045049 Ga0466959_0158914 Ga0466959_0158914_880_1539 198
131 3300045836 Ga0466958_0004697 Ga0466958_0004697_926_1567 198
132 3300045836 Ga0466958_0068185 Ga0466958_0068185_1052_1657 198
133 3300045836 Ga0466958_0137732 Ga0466958_0137732_307_912 198
134 3300045836 Ga0466958_0167229 Ga0466958_0167229_322_927 198
135 3300045836 Ga0466958_0204096 Ga0466958_0204096_419_1078 198
136 3300045976 Ga0466967_0023219 Ga0466967_0023219_1185_1790 198
137 3300045976 Ga0466967_0031554 Ga0466967_0031554_1725_2378 198
138 3300045976 Ga0466967_0036059 Ga0466967_0036059_2215_2856 198
139 3300045976 Ga0466967_0097117 Ga0466967_0097117_520_1149 198
140 3300045976 Ga0466967_0335681 Ga0466967_0335681_115_720 198
141 3300045976 Ga0466967_0398339 Ga0466967_0398339_126_731 198
142 3300045976 Ga0466967_0870688 Ga0466967_0870688_36_641 198
143 3300046459 Ga0495629_0497085 Ga0495629_0497085_62_676 198
144 3300048911 Ga0496108_0719509 Ga0496108_0719509_183_782 198
145 3300048916 Ga0496113_0187403 Ga0496113_0187403_851_1456 198
146 3300050511 nmdc:mga08y16_184669_c1 nmdc:mga08y16_184669_c1_1414_2028 198
147 3300050513 nmdc:mga0rr50_976221_c1 nmdc:mga0rr50_976221_c1_88_687 198
148 3300053085 Ga0495619_0506272 Ga0495619_0506272_29_694 198
149 3300061719 Ga0466962_0009588 Ga0466962_0009588_234_884 198
150 3300061719 Ga0466962_0086446 Ga0466962_0086446_836_1441 198

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00117

GATase

Glutamine amidotransferase class-I

8

207

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gud-assembly1.cif.gz_A crystal structure of amidotransferase hish from vibrio cholerae 0.9486 2 193
4gud-assembly2.cif.gz_B crystal structure of amidotransferase hish from vibrio cholerae 0.9324 2 198
4gud-assembly2.cif.gz_B crystal structure of amidotransferase hish from vibrio cholerae 0.9233 2 198
4gud-assembly1.cif.gz_A crystal structure of amidotransferase hish from vibrio cholerae 0.9207 2 193
2wjz-assembly3.cif.gz_D crystal structure of (hish) k181a y138a mutant of imidazoleglycerolphosphate synthase (hish hisf) which displays constitutive glutaminase activity 0.907 2 193
ID Description Score Start End Superfamily
af_Q57929_1_195_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9536 1 193 3.40.50.880
af_P9WMM1_1_205_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9524 2 193 3.40.50.880
af_Q57929_1_195_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9393 1 193 3.40.50.880
af_A0A1D6H537_1_181_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9388 53 191 3.40.50.880
4gudA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9359 2 193 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A3D0UN48-F1-model_v4 Imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) (IGP synthase glutaminase subunit) (EC 3.5.1.2) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH) 0.985 1 193 GO:0000105
GO:0000107
GO:0004359
GO:0005737
GO:0006541
GO:0016829
AF-A0A1W1HS76-F1-model_v4 Imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) (IGP synthase glutaminase subunit) (EC 3.5.1.2) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH) 0.9845 2 193 GO:0000105
GO:0000107
GO:0004359
GO:0005737
GO:0006541
GO:0016829
AF-A0A4S4BGU3-F1-model_v4 Imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) (IGP synthase glutaminase subunit) (EC 3.5.1.2) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH) 0.9841 1 195 GO:0000105
GO:0000107
GO:0004359
GO:0005737
GO:0006541
GO:0016829
AF-A0A0S8BK47-F1-model_v4 Imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) (IGP synthase glutaminase subunit) (EC 3.5.1.2) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH) 0.9838 1 193 GO:0000105
GO:0000107
GO:0004359
GO:0005737
GO:0006541
GO:0016829
AF-Q97KI0-F1-model_v4 Imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) (IGP synthase glutaminase subunit) (EC 3.5.1.2) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH) 0.9829 2 195 GO:0000105
GO:0000107
GO:0004359
GO:0005737
GO:0016829

Feature Viewer

pLDDT pTM Quality
95.25 0.92 High
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Predicted Structure (AlphaFold2)

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