F208380

General Info

Members Datasets Scaffolds Average Seq Length
150 92 150 527

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10028385|Ga0081538_100283854
Length 561
Sequence MPPRREQTPATSRRAPSAPADGTLSPVDNPQIADRLDAFATLVELADGNPHTVRAYRRAAETIRGAAVPVAELVRSGRARELRGVGPGIEARLGELVETGDIAELAELEREVSPDLVGFGRYLGLGAKRSVELARALDVHSADELREAAAAGRLRTVPGIGPKTEAQVLEALAHEAEPRPRHGLLLNRAWELVGGVAAALDGEAAGDVRRWRDSCELLAVVCAAGDPRSVLARFGALPQIVALVEESERRAVGVTVEGVPVELVAADPGRFGTALVRATGSPAYVAALEPLPDAPDEEAVFRALDLPWCPPELREEPFRGEPPTLLKLDDIRGDLHCHTTWSDGRMSVEEMGRAARARGYAYLAICDHTPAVGAVRGLSPDDVRRQADEIAATNELLAPFRVLRGIECDILPDGRLDLPDDVLAELDWVQASVHGGQRMPRIEMTKRVEAALRNPYVRCLSHPKGRYINRRPENALDLERVFEIALEEGVALEVNGLPDRLDLRGEHVRDALRAGVQIVCSTDAHSVRGLENMALSVATARRGWATAADVLNTRPLDAILG

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
9 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
22 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
27 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
43 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
44 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
45 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
46 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
47 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
48 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
51 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
52 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
57 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
58 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
59 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
60 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
61 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
62 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
63 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
66 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
67 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
68 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
69 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
70 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
71 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
75 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
76 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
77 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
78 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
79 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
80 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
81 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
87 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
88 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
91 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
92 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 18
Rhizosphere 71.33
Stem 0
Stem Tuber 0
Unclassified 10.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10001009 3300003373 Bacteria 6135
2 Ga0070683_100002529 3300005329 Bacteria 14582
3 Ga0070682_100040031 3300005337 Bacteria 2883
4 Ga0070678_100024265 3300005456 Bacteria 4057
5 Ga0070679_100003676 3300005530 Bacteria 14049
6 Ga0070684_100093805 3300005535 Bacteria 2672
7 Ga0068853_100086708 3300005539 Bacteria 2746
8 Ga0070693_100028241 3300005547 Bacteria 3049
9 Ga0070704_100064450 3300005549 Bacteria 2634
10 Ga0068856_100110221 3300005614 Bacteria 2749
11 Ga0070702_100009468 3300005615 Bacteria 4769
12 Ga0068861_100121398 3300005719 Bacteria 2108
13 Ga0081538_10000098 3300005981 Bacteria 84863
14 Ga0081538_10000150 3300005981 Bacteria 72682
15 Ga0081538_10000190 3300005981 Bacteria 67602
16 Ga0081538_10000329 3300005981 Bacteria 54226
17 Ga0081538_10000887 3300005981 Bacteria 32365
18 Ga0081538_10003822 3300005981 Bacteria 14067
19 Ga0081538_10017649 3300005981 Bacteria 5406
20 Ga0081538_10018807 3300005981 Bacteria 5167
21 Ga0081538_10028385 3300005981 Unclassified 3850
22 Ga0081538_10031774 3300005981 Bacteria 3552
23 Ga0081538_10044423 3300005981 Bacteria 2771
24 Ga0081539_10002904 3300005985 Bacteria 22668
25 Ga0081539_10039308 3300005985 Bacteria 2793
26 Ga0075431_100006195 3300006847 Bacteria 11874
27 Ga0075434_100001727 3300006871 Bacteria 18751
28 Ga0075434_100012844 3300006871 Bacteria 7952
29 Ga0075434_100182187 3300006871 Bacteria 2121
30 Ga0075429_100030608 3300006880 Bacteria 4676
31 Ga0111539_10010821 3300009094 Bacteria 11487
32 Ga0111539_10018365 3300009094 Bacteria 8662
33 Ga0111539_10023785 3300009094 Bacteria 7528
34 Ga0105245_10011931 3300009098 Bacteria 7555
35 Ga0105245_10013133 3300009098 Bacteria 7217
36 Ga0114129_10000894 3300009147 Bacteria 38837
37 Ga0114129_10004612 3300009147 Bacteria 19451
38 Ga0114129_10012078 3300009147 Bacteria 12293
39 Ga0105249_10000408 3300009553 Bacteria 41235
40 Ga0157374_10030896 3300013296 Bacteria 4865
41 Ga0157378_10092405 3300013297 Bacteria 2753
42 Ga0157372_10190647 3300013307 Bacteria 2375
43 Ga0163163_10057385 3300014325 Bacteria 3850
44 Ga0213876_10002583 3300021384 Bacteria 10580
45 Ga0213876_10006794 3300021384 Bacteria 6249
46 Ga0213876_10027573 3300021384 Bacteria 2997
47 Ga0207688_10009070 3300025901 Bacteria 5414
48 Ga0207699_10055993 3300025906 Bacteria 2349
49 Ga0207707_10034756 3300025912 Bacteria 4410
50 Ga0207693_10065086 3300025915 Unclassified 2855
51 Ga0207693_10090853 3300025915 Bacteria 2394
52 Ga0207687_10013846 3300025927 Bacteria 5268
53 Ga0207690_10068318 3300025932 Bacteria 2441
54 Ga0207706_10000575 3300025933 Bacteria 39106
55 Ga0207691_10159969 3300025940 Bacteria 1976
56 Ga0207661_10002704 3300025944 Bacteria 12197
57 Ga0207668_10003780 3300025972 Bacteria 8918
58 Ga0207677_10107644 3300026023 Bacteria 2068
59 Ga0207708_10002801 3300026075 Bacteria 12820
60 Ga0207708_10017315 3300026075 Bacteria 5425
61 Ga0207702_10127795 3300026078 Bacteria 2284
62 Ga0207675_100002676 3300026118 Bacteria 17573
63 Ga0207683_10026372 3300026121 Bacteria 5015
64 Ga0207683_10036955 3300026121 Bacteria 4252
65 Ga0373931_0004133 3300035691 Bacteria 6588
66 Ga0373947_0007848 3300035725 Bacteria 6164
67 Ga0373937_0105420 3300036401 Bacteria 2619
68 Ga0436364_0007345 3300037853 Bacteria 2786
69 Ga0436364_0493172 3300037853 Bacteria 4037
70 Ga0436364_0648428 3300037853 Bacteria 15392
71 Ga0436364_0704193 3300037853 Bacteria 18367
72 Ga0436364_0765826 3300037853 Archaea 2019
73 Ga0436365_0538032 3300039437 Bacteria 3660
74 Ga0436365_1097146 3300039437 Bacteria 2938
75 Ga0436365_1264524 3300039437 Bacteria 5185
76 Ga0436365_1302487 3300039437 Bacteria 7769
77 Ga0436365_1837010 3300039437 Bacteria 19470
78 Ga0436363_0074906 3300039450 Bacteria 7801
79 Ga0436363_1227349 3300039450 Bacteria 10928
80 Ga0436363_1432490 3300039450 Bacteria 9830
81 Ga0436362_0038064 3300039453 Bacteria 2381
82 Ga0466966_0014981 3300044684 Bacteria 5129
83 Ga0466966_0033369 3300044684 Bacteria 3333
84 Ga0466963_0002362 3300044694 Bacteria 10537
85 Ga0466963_0107626 3300044694 Bacteria 1912
86 Ga0466971_0026886 3300044719 Bacteria 2575
87 Ga0466968_0006751 3300044735 Archaea 4339
88 Ga0466968_0033306 3300044735 Bacteria 2147
89 Ga0466957_0008156 3300044842 Bacteria 5946
90 Ga0466960_0020676 3300044901 Unclassified 2919
91 Ga0466959_0013677 3300045049 Bacteria 5889
92 Ga0466958_0000974 3300045836 Bacteria 12927
93 Ga0466958_0002740 3300045836 Bacteria 8942
94 Ga0466967_0006721 3300045976 Bacteria 8182
95 Ga0466967_0013286 3300045976 Bacteria 6354
96 Ga0466967_0020043 3300045976 Bacteria 5393
97 Ga0466967_0087115 3300045976 Bacteria 2830
98 Ga0466967_0249354 3300045976 Bacteria 1696
99 Ga0495651_0002678 3300046462 Bacteria 13813
100 Ga0495608_0000811 3300046511 Bacteria 21888
101 Ga0495640_0015754 3300046533 Bacteria 5675
102 Ga0495635_0034281 3300046663 Bacteria 3521
103 Ga0495646_0060586 3300046680 Unclassified 2257
104 Ga0495647_0005190 3300046681 Bacteria 4267
105 Ga0495613_0051396 3300046689 Archaea 3037
106 Ga0495604_0043379 3300047317 Bacteria 3521
107 Ga0495674_0062574 3300047319 Bacteria 3239
108 Ga0495680_0005418 3300047322 Bacteria 12020
109 Ga0495684_0058567 3300047471 Bacteria 2934
110 Ga0495602_0037305 3300048088 Bacteria 4513
111 Ga0496101_0046907 3300048904 Bacteria 3100
112 Ga0496102_0045509 3300048905 Bacteria 3985
113 Ga0496104_0001043 3300048907 Bacteria 23668
114 Ga0496104_0006878 3300048907 Bacteria 10029
115 Ga0496105_0000125 3300048908 Bacteria 51796
116 Ga0496105_0027676 3300048908 Bacteria 4634
117 Ga0496106_0025044 3300048909 Bacteria 4439
118 Ga0496107_0019631 3300048910 Bacteria 4768
119 Ga0496107_0175620 3300048910 Unclassified 1590
120 Ga0496108_0009497 3300048911 Bacteria 7876
121 Ga0496108_0063647 3300048911 Bacteria 3106
122 Ga0496108_0068512 3300048911 Bacteria 2994
123 Ga0496109_0001529 3300048912 Bacteria 19241
124 Ga0496109_0019467 3300048912 Bacteria 5988
125 Ga0496110_0000329 3300048913 Bacteria 31635
126 Ga0496110_0000501 3300048913 Bacteria 26592
127 Ga0496110_0004324 3300048913 Bacteria 10992
128 Ga0496110_0118856 3300048913 Bacteria 2380
129 Ga0496111_0000465 3300048914 Bacteria 20624
130 Ga0496111_0002023 3300048914 Bacteria 12071
131 Ga0496112_0013664 3300048915 Bacteria 7502
132 Ga0496112_0022443 3300048915 Bacteria 6015
133 Ga0496113_0003619 3300048916 Bacteria 9288
134 Ga0496113_0005349 3300048916 Bacteria 8001
135 Ga0496114_0000252 3300048917 Bacteria 38765
136 Ga0496114_0008356 3300048917 Bacteria 8200
137 Ga0496114_0199302 3300048917 Bacteria 1753
138 Ga0501071_0038008 3300049587 Bacteria 3439
139 nmdc:mga05p37_1672_c1 3300050507 Bacteria 25774
140 nmdc:mga05p37_3384_c1 3300050507 Bacteria 18615
141 nmdc:mga09592_20007_c1 3300050508 Bacteria 5498
142 nmdc:mga06r32_16347_c1 3300050510 Bacteria 6760
143 nmdc:mga08y16_17849_c1 3300050511 Bacteria 7474
144 nmdc:mga08y16_35144_c1 3300050511 Bacteria 5264
145 nmdc:mga0n895_18660_c1 3300050512 Bacteria 6424
146 nmdc:mga0n895_21358_c1 3300050512 Bacteria 6052
147 nmdc:mga0a205_12239_c1 3300050515 Bacteria 7933
148 Ga0495595_0007669 3300053084 Bacteria 4421
149 Ga0501084_0058603 3300054114 Bacteria 3222
150 Ga0530510_0047260 3300061734 Bacteria 3110

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048910 Ga0496107_0175620 Ga0496107_0175620_107_1570 474
2 3300048913 Ga0496110_0118856 Ga0496110_0118856_125_1771 487
3 3300005981 Ga0081538_10018807 Ga0081538_100188075 491
4 3300044735 Ga0466968_0006751 Ga0466968_0006751_1065_2540 491
5 3300025915 Ga0207693_10090853 Ga0207693_100908533 493
6 3300005547 Ga0070693_100028241 Ga0070693_1000282412 501
7 3300009094 Ga0111539_10018365 Ga0111539_100183655 501
8 3300025912 Ga0207707_10034756 Ga0207707_100347562 501
9 3300048907 Ga0496104_0006878 Ga0496104_0006878_5323_6960 502
10 3300048911 Ga0496108_0009497 Ga0496108_0009497_1300_2937 502
11 3300048912 Ga0496109_0001529 Ga0496109_0001529_6090_7727 502
12 3300048913 Ga0496110_0000501 Ga0496110_0000501_402_2039 502
13 3300048914 Ga0496111_0000465 Ga0496111_0000465_13890_15527 502
14 3300048915 Ga0496112_0013664 Ga0496112_0013664_2845_4482 502
15 3300048916 Ga0496113_0005349 Ga0496113_0005349_775_2412 502
16 3300048910 Ga0496107_0019631 Ga0496107_0019631_1117_2763 504
17 3300026078 Ga0207702_10127795 Ga0207702_101277952 507
18 3300048907 Ga0496104_0001043 Ga0496104_0001043_3064_4710 507
19 3300048908 Ga0496105_0000125 Ga0496105_0000125_6028_7674 507
20 3300048911 Ga0496108_0063647 Ga0496108_0063647_57_1703 507
21 3300048912 Ga0496109_0019467 Ga0496109_0019467_930_2576 507
22 3300048913 Ga0496110_0000329 Ga0496110_0000329_28510_30156 507
23 3300048914 Ga0496111_0002023 Ga0496111_0002023_4106_5752 507
24 3300048917 Ga0496114_0008356 Ga0496114_0008356_657_2303 507
25 3300005329 Ga0070683_100002529 Ga0070683_1000025298 508
26 3300005456 Ga0070678_100024265 Ga0070678_1000242652 508
27 3300005530 Ga0070679_100003676 Ga0070679_1000036764 508
28 3300005535 Ga0070684_100093805 Ga0070684_1000938052 508
29 3300005549 Ga0070704_100064450 Ga0070704_1000644502 508
30 3300005614 Ga0068856_100110221 Ga0068856_1001102212 508
31 3300009098 Ga0105245_10013133 Ga0105245_100131338 508
32 3300025927 Ga0207687_10013846 Ga0207687_100138462 508
33 3300025944 Ga0207661_10002704 Ga0207661_100027046 508
34 3300026121 Ga0207683_10036955 Ga0207683_100369552 508
35 3300048905 Ga0496102_0045509 Ga0496102_0045509_198_1844 508
36 3300048917 Ga0496114_0000252 Ga0496114_0000252_33880_35526 508
37 3300045976 Ga0466967_0020043 Ga0466967_0020043_2052_3641 509
38 3300048904 Ga0496101_0046907 Ga0496101_0046907_866_2512 509
39 3300054114 Ga0501084_0058603 Ga0501084_0058603_1277_2893 510
40 3300061734 Ga0530510_0047260 Ga0530510_0047260_612_2270 511
41 3300005981 Ga0081538_10000190 Ga0081538_1000019053 512
42 3300035725 Ga0373947_0007848 Ga0373947_0007848_3324_4961 512
43 3300039437 Ga0436365_0538032 Ga0436365_0538032_2067_3650 512
44 3300044694 Ga0466963_0107626 Ga0466963_0107626_150_1811 512
45 3300046681 Ga0495647_0005190 Ga0495647_0005190_1427_3064 512
46 3300046689 Ga0495613_0051396 Ga0495613_0051396_477_2114 512
47 3300037853 Ga0436364_0704193 Ga0436364_0704193_1447_3057 513
48 3300048917 Ga0496114_0199302 Ga0496114_0199302_56_1702 513
49 3300025906 Ga0207699_10055993 Ga0207699_100559931 516
50 3300025915 Ga0207693_10065086 Ga0207693_100650863 516
51 3300036401 Ga0373937_0105420 Ga0373937_0105420_23_1633 516
52 3300046462 Ga0495651_0002678 Ga0495651_0002678_5214_6824 516
53 3300046511 Ga0495608_0000811 Ga0495608_0000811_11175_12785 516
54 3300046533 Ga0495640_0015754 Ga0495640_0015754_79_1689 516
55 3300046663 Ga0495635_0034281 Ga0495635_0034281_1238_2848 516
56 3300047317 Ga0495604_0043379 Ga0495604_0043379_171_1781 516
57 3300047319 Ga0495674_0062574 Ga0495674_0062574_1432_3042 516
58 3300047322 Ga0495680_0005418 Ga0495680_0005418_2628_4238 516
59 3300048088 Ga0495602_0037305 Ga0495602_0037305_351_1961 516
60 3300053084 Ga0495595_0007669 Ga0495595_0007669_101_1711 516
61 3300005981 Ga0081538_10003822 Ga0081538_100038224 517
62 3300046680 Ga0495646_0060586 Ga0495646_0060586_170_1780 517
63 3300047471 Ga0495684_0058567 Ga0495684_0058567_683_2293 517
64 3300006871 Ga0075434_100012844 Ga0075434_1000128446 519
65 3300009094 Ga0111539_10010821 Ga0111539_100108217 519
66 3300048911 Ga0496108_0068512 Ga0496108_0068512_1178_2794 519
67 3300050510 nmdc:mga06r32_16347_c1 nmdc:mga06r32_16347_c1_1736_3346 519
68 3300050512 nmdc:mga0n895_21358_c1 nmdc:mga0n895_21358_c1_3981_5591 519
69 3300050515 nmdc:mga0a205_12239_c1 nmdc:mga0a205_12239_c1_343_1953 519
70 3300005981 Ga0081538_10000329 Ga0081538_1000032947 522
71 3300006847 Ga0075431_100006195 Ga0075431_1000061952 523
72 3300009147 Ga0114129_10012078 Ga0114129_100120787 523
73 3300050511 nmdc:mga08y16_17849_c1 nmdc:mga08y16_17849_c1_4201_5841 523
74 3300005981 Ga0081538_10044423 Ga0081538_100444232 524
75 3300045976 Ga0466967_0013286 Ga0466967_0013286_2814_4421 524
76 3300025940 Ga0207691_10159969 Ga0207691_101599692 525
77 3300037853 Ga0436364_0007345 Ga0436364_0007345_572_2188 526
78 3300021384 Ga0213876_10027573 Ga0213876_100275732 527
79 3300039437 Ga0436365_1097146 Ga0436365_1097146_592_2214 527
80 3300039453 Ga0436362_0038064 Ga0436362_0038064_268_1908 527
81 3300005981 Ga0081538_10031774 Ga0081538_100317742 529
82 3300005985 Ga0081539_10002904 Ga0081539_100029042 529
83 3300013297 Ga0157378_10092405 Ga0157378_100924052 530
84 3300005981 Ga0081538_10017649 Ga0081538_100176493 531
85 3300045836 Ga0466958_0002740 Ga0466958_0002740_5392_7011 532
86 3300045976 Ga0466967_0087115 Ga0466967_0087115_1104_2735 532
87 3300006871 Ga0075434_100001727 Ga0075434_10000172711 533
88 3300009147 Ga0114129_10004612 Ga0114129_1000461212 533
89 3300050507 nmdc:mga05p37_1672_c1 nmdc:mga05p37_1672_c1_13398_15029 533
90 3300050512 nmdc:mga0n895_18660_c1 nmdc:mga0n895_18660_c1_2273_3904 533
91 3300005981 Ga0081538_10000887 Ga0081538_1000088721 535
92 3300005981 Ga0081538_10028385 Ga0081538_100283854 535
93 3300006880 Ga0075429_100030608 Ga0075429_1000306083 535
94 3300009147 Ga0114129_10000894 Ga0114129_1000089422 535
95 3300044684 Ga0466966_0014981 Ga0466966_0014981_3083_4690 535
96 3300045049 Ga0466959_0013677 Ga0466959_0013677_1800_3407 535
97 3300050507 nmdc:mga05p37_3384_c1 nmdc:mga05p37_3384_c1_158_1765 535
98 3300050508 nmdc:mga09592_20007_c1 nmdc:mga09592_20007_c1_2310_3917 535
99 3300005337 Ga0070682_100040031 Ga0070682_1000400312 536
100 3300005539 Ga0068853_100086708 Ga0068853_1000867082 536
101 3300005615 Ga0070702_100009468 Ga0070702_1000094684 536
102 3300009098 Ga0105245_10011931 Ga0105245_1001193110 536
103 3300013296 Ga0157374_10030896 Ga0157374_100308965 536
104 3300013307 Ga0157372_10190647 Ga0157372_101906472 536
105 3300014325 Ga0163163_10057385 Ga0163163_100573852 536
106 3300025901 Ga0207688_10009070 Ga0207688_100090706 536
107 3300025932 Ga0207690_10068318 Ga0207690_100683182 536
108 3300026023 Ga0207677_10107644 Ga0207677_101076442 536
109 3300026075 Ga0207708_10002801 Ga0207708_1000280110 536
110 3300026121 Ga0207683_10026372 Ga0207683_100263726 536
111 3300045976 Ga0466967_0249354 Ga0466967_0249354_76_1686 536
112 3300048908 Ga0496105_0027676 Ga0496105_0027676_729_2339 536
113 3300048909 Ga0496106_0025044 Ga0496106_0025044_1801_3411 536
114 3300048913 Ga0496110_0004324 Ga0496110_0004324_3005_4615 536
115 3300048915 Ga0496112_0022443 Ga0496112_0022443_728_2338 536
116 3300048916 Ga0496113_0003619 Ga0496113_0003619_1272_2882 536
117 3300005981 Ga0081538_10000098 Ga0081538_1000009874 537
118 3300003373 JGI25407J50210_10001009 JGI25407J50210_100010097 538
119 3300005719 Ga0068861_100121398 Ga0068861_1001213982 538
120 3300005981 Ga0081538_10000150 Ga0081538_100001503 538
121 3300005985 Ga0081539_10039308 Ga0081539_100393082 538
122 3300006871 Ga0075434_100182187 Ga0075434_1001821872 538
123 3300009094 Ga0111539_10023785 Ga0111539_100237856 538
124 3300009553 Ga0105249_10000408 Ga0105249_1000040838 538
125 3300021384 Ga0213876_10002583 Ga0213876_1000258310 538
126 3300021384 Ga0213876_10006794 Ga0213876_100067944 538
127 3300025933 Ga0207706_10000575 Ga0207706_1000057522 538
128 3300025972 Ga0207668_10003780 Ga0207668_100037809 538
129 3300026075 Ga0207708_10017315 Ga0207708_100173154 538
130 3300026118 Ga0207675_100002676 Ga0207675_1000026765 538
131 3300035691 Ga0373931_0004133 Ga0373931_0004133_3485_5104 538
132 3300037853 Ga0436364_0493172 Ga0436364_0493172_2087_3706 538
133 3300037853 Ga0436364_0648428 Ga0436364_0648428_13157_14773 538
134 3300037853 Ga0436364_0765826 Ga0436364_0765826_190_1815 538
135 3300039437 Ga0436365_1264524 Ga0436365_1264524_1758_3377 538
136 3300039437 Ga0436365_1302487 Ga0436365_1302487_2509_4125 538
137 3300039437 Ga0436365_1837010 Ga0436365_1837010_1718_3334 538
138 3300039450 Ga0436363_0074906 Ga0436363_0074906_1639_3318 538
139 3300039450 Ga0436363_1227349 Ga0436363_1227349_4739_6355 538
140 3300039450 Ga0436363_1432490 Ga0436363_1432490_6995_8611 538
141 3300044684 Ga0466966_0033369 Ga0466966_0033369_997_2625 538
142 3300044694 Ga0466963_0002362 Ga0466963_0002362_4662_6287 538
143 3300044719 Ga0466971_0026886 Ga0466971_0026886_81_1700 538
144 3300044735 Ga0466968_0033306 Ga0466968_0033306_13_1644 538
145 3300044842 Ga0466957_0008156 Ga0466957_0008156_540_2165 538
146 3300044901 Ga0466960_0020676 Ga0466960_0020676_952_2568 538
147 3300045836 Ga0466958_0000974 Ga0466958_0000974_5172_6797 538
148 3300045976 Ga0466967_0006721 Ga0466967_0006721_5186_6811 538
149 3300049587 Ga0501071_0038008 Ga0501071_0038008_1747_3363 538
150 3300050511 nmdc:mga08y16_35144_c1 nmdc:mga08y16_35144_c1_1468_3087 538

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14716

HHH_8

Helix-hairpin-helix domain

29

98

0.96

PF14520

HHH_5

Helix-hairpin-helix domain

123

174

0.92

PF02811

PHP

PHP domain

334

495

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1m65-assembly1.cif.gz_A ycdx protein 0.8602 304 535
6h5h-assembly1.cif.gz_A a computationally designed drp lyase domain reconstructed from two heterologous fragments 0.8238 3 74
1m65-assembly1.cif.gz_A ycdx protein 0.8188 304 535
1pb0-assembly1.cif.gz_A ycdx protein in autoinhibited state 0.7999 304 535
1pb0-assembly1.cif.gz_C ycdx protein in autoinhibited state 0.7988 304 535
ID Description Score Start End Superfamily
af_P96221_92_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9647 301 532 3.20.20.140
3au6A05 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9508 293 532 3.20.20.140
af_Q2FZD4_322_570_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9492 295 530 3.20.20.140
2w9mA05 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9458 293 532 3.20.20.140
3au6A05 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9319 293 532 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A537YJ63-F1-model_v4 Histidinol-phosphatase 0.9778 1 83
AF-A0A800D7F4-F1-model_v4 PHP domain-containing protein 0.9687 295 532 GO:0005829
GO:0008270
GO:0042578
AF-A0A524H6A4-F1-model_v4 PHP domain-containing protein 0.9682 295 531 GO:0005829
GO:0008270
GO:0042578
AF-A0A537TSD4-F1-model_v4 DNA polymerase/3'-5' exonuclease PolX 0.9679 195 534 GO:0004527
GO:0005829
GO:0008270
GO:0042578
AF-A0A6L6BHJ6-F1-model_v4 deleted 0.9675 307 531

Feature Viewer

pLDDT pTM Quality
88.93 0.83 High
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Predicted Structure (AlphaFold2)

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