F208342

General Info

Members Datasets Scaffolds Average Seq Length
150 102 150 281

Family's Representative Sequence

Representative Sequence 3300005834|Ga0068851_10042875|Ga0068851_100428752
Length 307
Sequence LSAALAAPADEGVRRSTYNPRVPNDHRRGLLLIAFAALLWSTGGIGIKAISDAPLKVTFYRSLFAAIALVLLFGKRVLARRWRSTAVFAMAIVSYGTCLTTFVVATKWTTAANAIFLQYAGVVWVLLFSPLVVREPMRSRDVIAIAVAMCGMALFFVGRFEARGMAGNLMALTSSVFFAALILALRREHDAAESAITWGNAALALALLPSVSHDLALTPKSFGVLLFLGVFQIALAYVLFVRGLKFVTATQASLTGMLEPVSNPIWVLLFLGERPSAFAIAGAIVVLAAIAWHTLGGGPAAELPAPD

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
90 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
91 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
92 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
95 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
98 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
99 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
100 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.33
Stem 0
Stem Tuber 0
Unclassified 4.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10008907 3300005327 Bacteria 8064
2 Ga0070683_100000033 3300005329 Bacteria 135305
3 Ga0070683_100068407 3300005329 Bacteria 3309
4 Ga0070670_100001028 3300005331 Bacteria 22071
5 Ga0070670_100025865 3300005331 Bacteria 5049
6 Ga0068869_100045182 3300005334 Bacteria 3170
7 Ga0068869_100240270 3300005334 Bacteria 1443
8 Ga0070680_100323280 3300005336 Bacteria 1310
9 Ga0070682_100000036 3300005337 Bacteria 149965
10 Ga0068868_100000232 3300005338 Bacteria 38001
11 Ga0068868_100005382 3300005338 Bacteria 8994
12 Ga0070689_100097245 3300005340 Bacteria 2328
13 Ga0070687_100051961 3300005343 Bacteria 2125
14 Ga0070661_100200125 3300005344 Bacteria 1526
15 Ga0070692_10005858 3300005345 Bacteria 5286
16 Ga0070675_100000007 3300005354 Bacteria 263394
17 Ga0070675_100255039 3300005354 Bacteria 1536
18 Ga0070674_100127288 3300005356 Unclassified 1894
19 Ga0070673_100318232 3300005364 Bacteria 1374
20 Ga0070713_100001390 3300005436 Bacteria 15515
21 Ga0070701_10002176 3300005438 Bacteria 7467
22 Ga0070705_100329280 3300005440 Bacteria 1106
23 Ga0070708_100451434 3300005445 Bacteria 1213
24 Ga0070685_10040282 3300005466 Bacteria 2658
25 Ga0070706_100152083 3300005467 Bacteria 2160
26 Ga0070707_100002853 3300005468 Bacteria 16454
27 Ga0070707_100008991 3300005468 Bacteria 9265
28 Ga0070707_100124636 3300005468 Bacteria 2502
29 Ga0070707_100302650 3300005468 Bacteria 1554
30 Ga0070698_100346924 3300005471 Unclassified 1416
31 Ga0070699_100004708 3300005518 Bacteria 12068
32 Ga0070699_100019266 3300005518 Bacteria 5873
33 Ga0070699_100028051 3300005518 Bacteria 4855
34 Ga0070684_100000183 3300005535 Bacteria 43327
35 Ga0070697_100210101 3300005536 Unclassified 1657
36 Ga0070697_100281463 3300005536 Unclassified 1427
37 Ga0070672_100000075 3300005543 Bacteria 45961
38 Ga0070704_100302015 3300005549 Bacteria 1334
39 Ga0068854_100000841 3300005578 Bacteria 18383
40 Ga0068854_100120698 3300005578 Unclassified 1990
41 Ga0070702_100489392 3300005615 Bacteria 901
42 Ga0068864_100000349 3300005618 Bacteria 40495
43 Ga0068851_10042875 3300005834 Bacteria 2279
44 Ga0068870_10096548 3300005840 Bacteria 1662
45 Ga0068858_100000660 3300005842 Bacteria 36058
46 Ga0070717_10000064 3300006028 Bacteria 89273
47 Ga0070716_100065726 3300006173 Bacteria 2113
48 Ga0097621_100200532 3300006237 Unclassified 1732
49 Ga0075428_100069220 3300006844 Bacteria 3860
50 Ga0075431_100060793 3300006847 Unclassified 3899
51 Ga0075433_10009543 3300006852 Bacteria 7758
52 Ga0075434_100026771 3300006871 Bacteria 5655
53 Ga0068865_100028769 3300006881 Bacteria 3681
54 Ga0075436_100051203 3300006914 Bacteria 2850
55 Ga0075436_100096090 3300006914 Bacteria 2061
56 Ga0075435_100000385 3300007076 Bacteria 26933
57 Ga0075435_100032590 3300007076 Bacteria 4116
58 Ga0075435_100048021 3300007076 Bacteria 3428
59 Ga0111539_10000022 3300009094 Bacteria 240838
60 Ga0105245_10000052 3300009098 Bacteria 126402
61 Ga0105245_10000197 3300009098 Bacteria 57534
62 Ga0105245_10003320 3300009098 Bacteria 14452
63 Ga0105245_10320631 3300009098 Bacteria 1526
64 Ga0114129_10083868 3300009147 Bacteria 4425
65 Ga0105242_10003248 3300009176 Bacteria 12684
66 Ga0105238_10000002 3300009551 Bacteria 772711
67 Ga0157369_10007019 3300013105 Bacteria 12994
68 Ga0157374_10000005 3300013296 Bacteria 646767
69 Ga0157378_10000241 3300013297 Bacteria 53256
70 Ga0157378_10002521 3300013297 Bacteria 16293
71 Ga0157372_10340943 3300013307 Unclassified 1746
72 Ga0157375_10000029 3300013308 Bacteria 199310
73 Ga0157375_10000055 3300013308 Bacteria 126704
74 Ga0157375_10001680 3300013308 Bacteria 19044
75 Ga0157375_10259233 3300013308 Unclassified 1900
76 Ga0157377_10000001 3300014745 Bacteria 623098
77 Ga0157377_10000360 3300014745 Bacteria 20305
78 Ga0157376_10000003 3300014969 Bacteria 568634
79 Ga0213873_10000018 3300021358 Bacteria 123140
80 Ga0213873_10006940 3300021358 Unclassified 2248
81 Ga0213876_10000009 3300021384 Bacteria 496136
82 Ga0213876_10000058 3300021384 Bacteria 134080
83 Ga0213876_10001981 3300021384 Bacteria 12241
84 Ga0213876_10070557 3300021384 Unclassified 1845
85 Ga0207656_10057084 3300025321 Bacteria 1703
86 Ga0207645_10193457 3300025907 Unclassified 1337
87 Ga0207705_10088146 3300025909 Bacteria 2270
88 Ga0207684_10014200 3300025910 Bacteria 6874
89 Ga0207684_10200294 3300025910 Bacteria 1722
90 Ga0207684_10303340 3300025910 Bacteria 1377
91 Ga0207695_10004803 3300025913 Bacteria 18286
92 Ga0207646_10018421 3300025922 Bacteria 6513
93 Ga0207646_10145788 3300025922 Unclassified 2133
94 Ga0207646_10255993 3300025922 Bacteria 1582
95 Ga0207694_10000001 3300025924 Bacteria 4078485
96 Ga0207650_10000114 3300025925 Bacteria 105111
97 Ga0207650_10071148 3300025925 Bacteria 2616
98 Ga0207659_10000036 3300025926 Bacteria 103327
99 Ga0207659_10148520 3300025926 Bacteria 1828
100 Ga0207687_10000005 3300025927 Bacteria 770649
101 Ga0207687_10001881 3300025927 Bacteria 14454
102 Ga0207687_10002072 3300025927 Bacteria 13726
103 Ga0207700_10008464 3300025928 Bacteria 6377
104 Ga0207686_10010867 3300025934 Bacteria 4965
105 Ga0207670_10001398 3300025936 Bacteria 12697
106 Ga0207704_10008460 3300025938 Bacteria 4924
107 Ga0207665_10084239 3300025939 Bacteria 2194
108 Ga0207665_10106600 3300025939 Unclassified 1964
109 Ga0207691_10011324 3300025940 Bacteria 8558
110 Ga0207689_10003199 3300025942 Bacteria 15005
111 Ga0207689_10119759 3300025942 Bacteria 2166
112 Ga0207689_10171714 3300025942 Bacteria 1787
113 Ga0207661_10000006 3300025944 Bacteria 537727
114 Ga0207640_10000901 3300025981 Bacteria 16793
115 Ga0207640_10136602 3300025981 Unclassified 1781
116 Ga0207677_10000101 3300026023 Bacteria 70739
117 Ga0207677_10000141 3300026023 Bacteria 59003
118 Ga0207703_10000431 3300026035 Bacteria 44157
119 Ga0207639_10000118 3300026041 Bacteria 60793
120 Ga0207708_10000041 3300026075 Bacteria 126142
121 Ga0207676_10000023 3300026095 Bacteria 266848
122 Ga0207674_10052708 3300026116 Bacteria 4148
123 Ga0207698_10416789 3300026142 Bacteria 1288
124 Ga0207428_10000030 3300027907 Bacteria 240846
125 Ga0373932_0000547 3300035112 Bacteria 11529
126 Ga0436365_0464141 3300039437 Bacteria 46759
127 Ga0436365_0532810 3300039437 Bacteria 21559
128 Ga0436365_1703283 3300039437 Bacteria 22585
129 Ga0436362_0143084 3300039453 Unclassified 2293
130 Ga0436362_1069013 3300039453 Bacteria 90804
131 Ga0466960_0289015 3300044901 Bacteria 921
132 Ga0495580_0014592 3300046472 Bacteria 5956
133 Ga0495620_0001196 3300046515 Bacteria 15879
134 Ga0495647_0019377 3300046681 Bacteria 2432
135 Ga0495684_0028748 3300047471 Bacteria 4268
136 Ga0501073_0001495 3300049589 Bacteria 17301
137 Ga0501080_0023190 3300049742 Bacteria 5755
138 nmdc:mga09592_70104_c1 3300050508 Bacteria 2974
139 nmdc:mga06r32_6288_c1 3300050510 Bacteria 10666
140 nmdc:mga08y16_24_c1 3300050511 Bacteria 240846
141 nmdc:mga0n895_16285_c2 3300050512 Bacteria 5693
142 nmdc:mga0n895_567084_c1 3300050512 Unclassified 1140
143 nmdc:mga0rr50_18505_c1 3300050513 Bacteria 4681
144 nmdc:mga0rr50_88_c1 3300050513 Bacteria 52121
145 nmdc:mga08x19_102941_c1 3300050514 Bacteria 1896
146 nmdc:mga08x19_109604_c1 3300050514 Bacteria 1840
147 nmdc:mga08x19_2519_c1 3300050514 Bacteria 11128
148 nmdc:mga08x19_36954_c1 3300050514 Bacteria 3096
149 nmdc:mga0a205_8296_c1 3300050515 Bacteria 7788
150 Ga0495655_0000053 3300053083 Bacteria 24219

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006852 Ga0075433_10009543 Ga0075433_100095437 254
2 3300006871 Ga0075434_100026771 Ga0075434_1000267713 254
3 3300007076 Ga0075435_100048021 Ga0075435_1000480214 254
4 3300050512 nmdc:mga0n895_16285_c2 nmdc:mga0n895_16285_c2_1834_2604 254
5 3300050515 nmdc:mga0a205_8296_c1 nmdc:mga0a205_8296_c1_1796_2566 254
6 3300050514 nmdc:mga08x19_109604_c1 nmdc:mga08x19_109604_c1_400_1245 259
7 3300035112 Ga0373932_0000547 Ga0373932_0000547_7517_8365 262
8 3300025910 Ga0207684_10200294 Ga0207684_102002941 265
9 3300005440 Ga0070705_100329280 Ga0070705_1003292802 266
10 3300005471 Ga0070698_100346924 Ga0070698_1003469242 266
11 3300009147 Ga0114129_10083868 Ga0114129_100838684 266
12 3300025939 Ga0207665_10106600 Ga0207665_101066003 270
13 3300009551 Ga0105238_10000002 Ga0105238_10000002545 271
14 3300013308 Ga0157375_10001680 Ga0157375_1000168015 271
15 3300025924 Ga0207694_10000001 Ga0207694_10000001544 271
16 3300005329 Ga0070683_100000033 Ga0070683_10000003356 272
17 3300005331 Ga0070670_100001028 Ga0070670_10000102820 272
18 3300005338 Ga0068868_100000232 Ga0068868_10000023231 272
19 3300005468 Ga0070707_100302650 Ga0070707_1003026502 272
20 3300005535 Ga0070684_100000183 Ga0070684_10000018311 272
21 3300005578 Ga0068854_100000841 Ga0068854_10000084110 272
22 3300005578 Ga0068854_100120698 Ga0068854_1001206982 272
23 3300013105 Ga0157369_10007019 Ga0157369_100070191 272
24 3300013296 Ga0157374_10000005 Ga0157374_10000005525 272
25 3300014745 Ga0157377_10000001 Ga0157377_1000000147 272
26 3300014969 Ga0157376_10000003 Ga0157376_10000003278 272
27 3300025925 Ga0207650_10000114 Ga0207650_1000011433 272
28 3300025944 Ga0207661_10000006 Ga0207661_10000006422 272
29 3300025981 Ga0207640_10000901 Ga0207640_1000090112 272
30 3300025981 Ga0207640_10136602 Ga0207640_101366022 272
31 3300026023 Ga0207677_10000101 Ga0207677_1000010131 272
32 3300005329 Ga0070683_100068407 Ga0070683_1000684071 275
33 3300005331 Ga0070670_100025865 Ga0070670_1000258658 275
34 3300005345 Ga0070692_10005858 Ga0070692_100058584 275
35 3300009098 Ga0105245_10000052 Ga0105245_1000005254 275
36 3300013307 Ga0157372_10340943 Ga0157372_103409433 275
37 3300013308 Ga0157375_10259233 Ga0157375_102592332 275
38 3300021358 Ga0213873_10006940 Ga0213873_100069402 275
39 3300021384 Ga0213876_10000009 Ga0213876_10000009260 275
40 3300025927 Ga0207687_10000005 Ga0207687_1000000563 275
41 3300039437 Ga0436365_1703283 Ga0436365_1703283_3667_4527 275
42 3300039453 Ga0436362_0143084 Ga0436362_0143084_483_1343 275
43 3300005549 Ga0070704_100302015 Ga0070704_1003020152 277
44 3300050512 nmdc:mga0n895_567084_c1 nmdc:mga0n895_567084_c1_262_1098 277
45 3300005543 Ga0070672_100000075 Ga0070672_10000007525 278
46 3300025940 Ga0207691_10011324 Ga0207691_100113247 278
47 3300021384 Ga0213876_10001981 Ga0213876_100019812 280
48 3300039437 Ga0436365_0532810 Ga0436365_0532810_13729_14574 280
49 3300046472 Ga0495580_0014592 Ga0495580_0014592_898_1746 280
50 3300046681 Ga0495647_0019377 Ga0495647_0019377_891_1739 280
51 3300047471 Ga0495684_0028748 Ga0495684_0028748_2174_3022 280
52 3300049589 Ga0501073_0001495 Ga0501073_0001495_5968_6810 280
53 3300049742 Ga0501080_0023190 Ga0501080_0023190_1498_2340 280
54 3300005337 Ga0070682_100000036 Ga0070682_10000003667 281
55 3300005445 Ga0070708_100451434 Ga0070708_1004514342 281
56 3300005518 Ga0070699_100019266 Ga0070699_1000192662 281
57 3300005518 Ga0070699_100028051 Ga0070699_1000280513 281
58 3300005536 Ga0070697_100210101 Ga0070697_1002101011 281
59 3300005536 Ga0070697_100281463 Ga0070697_1002814631 281
60 3300006914 Ga0075436_100096090 Ga0075436_1000960902 281
61 3300050514 nmdc:mga08x19_102941_c1 nmdc:mga08x19_102941_c1_929_1786 281
62 3300050514 nmdc:mga08x19_36954_c1 nmdc:mga08x19_36954_c1_1437_2294 281
63 3300005354 Ga0070675_100000007 Ga0070675_100000007232 282
64 3300005438 Ga0070701_10002176 Ga0070701_100021761 282
65 3300006847 Ga0075431_100060793 Ga0075431_1000607932 282
66 3300009176 Ga0105242_10003248 Ga0105242_100032487 282
67 3300021358 Ga0213873_10000018 Ga0213873_1000001862 282
68 3300021384 Ga0213876_10000058 Ga0213876_1000005867 282
69 3300025926 Ga0207659_10000036 Ga0207659_1000003673 282
70 3300025934 Ga0207686_10010867 Ga0207686_100108674 282
71 3300026075 Ga0207708_10000041 Ga0207708_1000004173 282
72 3300039437 Ga0436365_0464141 Ga0436365_0464141_25655_26506 282
73 3300039453 Ga0436362_1069013 Ga0436362_1069013_69081_69932 282
74 3300046515 Ga0495620_0001196 Ga0495620_0001196_13596_14444 282
75 3300050510 nmdc:mga06r32_6288_c1 nmdc:mga06r32_6288_c1_6926_7774 282
76 3300005340 Ga0070689_100097245 Ga0070689_1000972452 283
77 3300005343 Ga0070687_100051961 Ga0070687_1000519612 283
78 3300005364 Ga0070673_100318232 Ga0070673_1003182322 283
79 3300005466 Ga0070685_10040282 Ga0070685_100402822 283
80 3300009094 Ga0111539_10000022 Ga0111539_10000022106 283
81 3300027907 Ga0207428_10000030 Ga0207428_10000030105 283
82 3300050508 nmdc:mga09592_70104_c1 nmdc:mga09592_70104_c1_1446_2300 283
83 3300050511 nmdc:mga08y16_24_c1 nmdc:mga08y16_24_c1_99530_100381 283
84 3300005338 Ga0068868_100005382 Ga0068868_1000053823 284
85 3300006844 Ga0075428_100069220 Ga0075428_1000692203 284
86 3300026023 Ga0207677_10000141 Ga0207677_100001413 284
87 3300005334 Ga0068869_100240270 Ga0068869_1002402702 285
88 3300005354 Ga0070675_100255039 Ga0070675_1002550392 285
89 3300005436 Ga0070713_100001390 Ga0070713_10000139015 285
90 3300005468 Ga0070707_100002853 Ga0070707_10000285311 285
91 3300005615 Ga0070702_100489392 Ga0070702_1004893921 285
92 3300005618 Ga0068864_100000349 Ga0068864_10000034950 285
93 3300005834 Ga0068851_10042875 Ga0068851_100428752 285
94 3300006028 Ga0070717_10000064 Ga0070717_1000006430 285
95 3300006173 Ga0070716_100065726 Ga0070716_1000657262 285
96 3300006914 Ga0075436_100051203 Ga0075436_1000512033 285
97 3300007076 Ga0075435_100000385 Ga0075435_1000003852 285
98 3300009098 Ga0105245_10003320 Ga0105245_100033204 285
99 3300009098 Ga0105245_10320631 Ga0105245_103206312 285
100 3300013308 Ga0157375_10000055 Ga0157375_1000005540 285
101 3300025321 Ga0207656_10057084 Ga0207656_100570842 285
102 3300025922 Ga0207646_10018421 Ga0207646_100184213 285
103 3300025926 Ga0207659_10148520 Ga0207659_101485202 285
104 3300025927 Ga0207687_10001881 Ga0207687_1000188114 285
105 3300025928 Ga0207700_10008464 Ga0207700_100084647 285
106 3300025939 Ga0207665_10084239 Ga0207665_100842393 285
107 3300025942 Ga0207689_10171714 Ga0207689_101717142 285
108 3300026095 Ga0207676_10000023 Ga0207676_10000023128 285
109 3300026142 Ga0207698_10416789 Ga0207698_104167892 285
110 3300044901 Ga0466960_0289015 Ga0466960_0289015_50_907 285
111 3300050513 nmdc:mga0rr50_88_c1 nmdc:mga0rr50_88_c1_26719_27615 285
112 3300050514 nmdc:mga08x19_2519_c1 nmdc:mga08x19_2519_c1_1920_2816 285
113 3300053083 Ga0495655_0000053 Ga0495655_0000053_19398_20255 285
114 3300005327 Ga0070658_10008907 Ga0070658_100089075 286
115 3300005334 Ga0068869_100045182 Ga0068869_1000451824 286
116 3300005336 Ga0070680_100323280 Ga0070680_1003232802 286
117 3300005344 Ga0070661_100200125 Ga0070661_1002001251 286
118 3300005356 Ga0070674_100127288 Ga0070674_1001272882 286
119 3300005467 Ga0070706_100152083 Ga0070706_1001520832 286
120 3300005468 Ga0070707_100008991 Ga0070707_1000089918 286
121 3300005468 Ga0070707_100124636 Ga0070707_1001246362 286
122 3300005518 Ga0070699_100004708 Ga0070699_1000047084 286
123 3300005840 Ga0068870_10096548 Ga0068870_100965482 286
124 3300005842 Ga0068858_100000660 Ga0068858_10000066035 286
125 3300006237 Ga0097621_100200532 Ga0097621_1002005322 286
126 3300006881 Ga0068865_100028769 Ga0068865_1000287693 286
127 3300007076 Ga0075435_100032590 Ga0075435_1000325903 286
128 3300009098 Ga0105245_10000197 Ga0105245_1000019741 286
129 3300013297 Ga0157378_10000241 Ga0157378_1000024122 286
130 3300013297 Ga0157378_10002521 Ga0157378_1000252113 286
131 3300013308 Ga0157375_10000029 Ga0157375_100000298 286
132 3300014745 Ga0157377_10000360 Ga0157377_1000036015 286
133 3300021384 Ga0213876_10070557 Ga0213876_100705572 286
134 3300025907 Ga0207645_10193457 Ga0207645_101934571 286
135 3300025909 Ga0207705_10088146 Ga0207705_100881462 286
136 3300025910 Ga0207684_10014200 Ga0207684_100142003 286
137 3300025910 Ga0207684_10303340 Ga0207684_103033402 286
138 3300025913 Ga0207695_10004803 Ga0207695_1000480311 286
139 3300025922 Ga0207646_10145788 Ga0207646_101457883 286
140 3300025922 Ga0207646_10255993 Ga0207646_102559932 286
141 3300025925 Ga0207650_10071148 Ga0207650_100711482 286
142 3300025927 Ga0207687_10002072 Ga0207687_100020726 286
143 3300025936 Ga0207670_10001398 Ga0207670_100013986 286
144 3300025938 Ga0207704_10008460 Ga0207704_100084603 286
145 3300025942 Ga0207689_10003199 Ga0207689_1000319915 286
146 3300025942 Ga0207689_10119759 Ga0207689_101197591 286
147 3300026035 Ga0207703_10000431 Ga0207703_1000043114 286
148 3300026041 Ga0207639_10000118 Ga0207639_1000011825 286
149 3300026116 Ga0207674_10052708 Ga0207674_100527085 286
150 3300050513 nmdc:mga0rr50_18505_c1 nmdc:mga0rr50_18505_c1_3471_4331 286

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00892

EamA

EamA-like transporter family

27

157

0.89

PF00892

EamA

EamA-like transporter family

165

295

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7b0k-assembly1.cif.gz_A membrane protein structure 0.8309 5 270
5i20-assembly4.cif.gz_D crystal structure of protein 0.8185 7 276
7paf-assembly1.cif.gz_D streptococcus pneumoniae choline importer licb in lipid nanodiscs 0.8181 8 270
7b0k-assembly1.cif.gz_A membrane protein structure 0.8103 5 270
5i20-assembly3.cif.gz_C crystal structure of protein 0.8088 4 275
ID Description Score Start End Superfamily
af_A0A0P0YAS8_28_439_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7643 4 270 1.20.1740.10
af_A0A0P0YAS8_28_439_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7164 4 270 1.20.1740.10
af_Q20583_6_327_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7039 6 276 1.20.1740.10
af_A0A0P0WMA8_96_409_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6802 8 271 1.20.1740.10
af_Q20583_6_327_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6711 6 276 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A2V7W1M3-F1-model_v4 EamA family transporter 0.9826 1 286 GO:0016020
AF-A0A2V7W1M3-F1-model_v4 EamA family transporter 0.9792 1 286 GO:0016020
AF-A0A534TYT6-F1-model_v4 DMT family transporter 0.9657 1 283 GO:0005886
AF-A0A250JIN9-F1-model_v4 EamA domain-containing protein 0.9627 6 283 GO:0016020
AF-A0A7X7V191-F1-model_v4 EamA family transporter 0.961 1 275 GO:0016020

Feature Viewer

pLDDT pTM Quality
88.66 0.88 High
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Predicted Structure (AlphaFold2)

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