F206430

General Info

Members Datasets Scaffolds Average Seq Length
149 97 130 210

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10190543|Ga0265327_101905432
Length 222
Sequence LPGLISKSTNPWFRQMKKYISKFHYLTQDLPHRSHVEQAQIACSNGANWVQYRCLAKPDEELIVEINAIAEICDDWGATLILTDHYHLLNRVDAQGVHIEDLEADLSVIRNQIGEDKTLGTSATNINRLLQLQQAGVIDYCAYGPFAHTDTKPNDFALLGFEGYRQLAAYAFELPVIAVGGIQLNDVDHLLNTDIFGIAISASINLAIDPANALKEFYRKIY

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2738541284 Pedobacter sp. YR016 Isolate Unclassified
4 2738541302 Pedobacter sp. CF074 Isolate Unclassified
5 2738543023 Pedobacter sp. OK628 Isolate Unclassified
6 2739367651 Pedobacter sp. OK291 Isolate Unclassified
7 2739367656 Pedobacter sp. CF523 Isolate Unclassified
8 2739367663 Pedobacter sp. YR510 Isolate Unclassified
9 2818991437 Pedobacter terrae 518 Isolate Unclassified
10 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
11 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
12 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
13 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
14 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
15 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
16 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
17 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
18 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
19 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
22 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
23 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
24 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
25 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
26 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
27 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
28 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
31 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
50 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
51 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
52 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
57 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
58 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
84 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
85 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
86 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
93 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
94 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
95 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
96 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
97 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.25
Metatranscriptomes 0
Isolates 12.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.77
Nodule 0
Rhizoplane 0
Rhizosphere 71.14
Stem 0
Stem Tuber 0
Unclassified 14.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1001364 3300002772 Bacteria 5917
2 JGI25152J39213_1000043 3300002773 Bacteria 87508
3 JGI25150J39212_1000023 3300002774 Bacteria 130663
4 JGI25151J46595_10000082 3300003187 Bacteria 130832
5 JGI25165J46597_1001953 3300003214 Bacteria 8087
6 JGI25153J46596_10000060 3300003215 Bacteria 131744
7 rootH1_10221730 3300003323 Bacteria 3488
8 rootH1_10251518 3300003323 Unclassified 2565
9 rootH1_10298031 3300003323 Bacteria 4239
10 Ga0055536_1000002 3300003781 Bacteria 605605
11 Ga0055530_10002029 3300003791 Bacteria 13680
12 Ga0065714_10003052 3300005288 Bacteria 15344
13 Ga0065714_10005878 3300005288 Bacteria 5446
14 Ga0065714_10010468 3300005288 Bacteria 2929
15 Ga0065714_10064616 3300005288 Bacteria 28554
16 Ga0065714_10073894 3300005288 Bacteria 3113
17 Ga0065714_10103487 3300005288 Bacteria 1602
18 Ga0065714_10211836 3300005288 Bacteria 864
19 Ga0065704_10003126 3300005289 Bacteria 7031
20 Ga0065704_10074605 3300005289 Bacteria 6141
21 Ga0070683_100250313 3300005329 Bacteria 1685
22 Ga0070679_100128480 3300005530 Bacteria 2516
23 Ga0070684_100141298 3300005535 Bacteria 2177
24 Ga0068855_100000060 3300005563 Bacteria 133838
25 Ga0105244_10085940 3300009036 Bacteria 1552
26 Ga0105240_10149049 3300009093 Bacteria 2788
27 Ga0105237_10003060 3300009545 Bacteria 20171
28 Ga0105237_10029798 3300009545 Bacteria 5543
29 Ga0105238_10437723 3300009551 Bacteria 1303
30 Ga0105239_10003817 3300010375 Bacteria 18316
31 Ga0157373_10001629 3300013100 Bacteria 17142
32 Ga0157373_10001824 3300013100 Bacteria 16222
33 Ga0157373_10002256 3300013100 Bacteria 14605
34 Ga0157373_10005432 3300013100 Bacteria 9572
35 Ga0157371_10000025 3300013102 Bacteria 279746
36 Ga0157371_10005932 3300013102 Bacteria 10197
37 Ga0157371_10011303 3300013102 Bacteria 6891
38 Ga0157371_10115077 3300013102 Bacteria 1910
39 Ga0157371_10288153 3300013102 Bacteria 1187
40 Ga0157370_10001766 3300013104 Bacteria 26676
41 Ga0157370_10025515 3300013104 Bacteria 5851
42 Ga0157370_10032232 3300013104 Bacteria 5118
43 Ga0157370_10065282 3300013104 Bacteria 3444
44 Ga0157370_10110088 3300013104 Bacteria 2575
45 Ga0157370_10135594 3300013104 Bacteria 2294
46 Ga0157370_10188063 3300013104 Bacteria 1917
47 Ga0157370_10203654 3300013104 Bacteria 1835
48 Ga0157370_10845561 3300013104 Bacteria 832
49 Ga0157369_10000038 3300013105 Bacteria 189078
50 Ga0157369_10014801 3300013105 Bacteria 8803
51 Ga0157369_10598474 3300013105 Bacteria 1138
52 Ga0157374_10378098 3300013296 Unclassified 1411
53 Ga0157378_10034984 3300013297 Bacteria 4442
54 Ga0163162_10000102 3300013306 Bacteria 76836
55 Ga0157372_10061910 3300013307 Bacteria 4191
56 Ga0157375_10059958 3300013308 Bacteria 3772
57 Ga0157375_10193844 3300013308 Bacteria 2187
58 Ga0182008_10000002 3300014497 Bacteria 480216
59 Ga0182008_10000309 3300014497 Bacteria 38347
60 Ga0182008_10000458 3300014497 Bacteria 31101
61 Ga0182008_10022129 3300014497 Bacteria 3256
62 Ga0182006_1000076 3300015261 Bacteria 127435
63 Ga0182006_1000131 3300015261 Bacteria 80570
64 Ga0182006_1000334 3300015261 Bacteria 40253
65 Ga0182006_1002342 3300015261 Bacteria 10406
66 Ga0182007_10000059 3300015262 Bacteria 88462
67 Ga0183373_1002 3300015682 Bacteria 990153
68 Ga0163161_10001426 3300017792 Bacteria 17622
69 Ga0163161_10003856 3300017792 Bacteria 10514
70 Ga0163161_10011583 3300017792 Bacteria 6121
71 Ga0163161_10017427 3300017792 Bacteria 5027
72 Ga0163161_10018202 3300017792 Bacteria 4925
73 Ga0163161_10050777 3300017792 Bacteria 3003
74 Ga0163161_10086585 3300017792 Bacteria 2313
75 Ga0207427_100091 3300025231 Bacteria 133410
76 Ga0209437_100026 3300025233 Bacteria 542698
77 Ga0207425_1000051 3300025245 Bacteria 166795
78 Ga0209026_1000486 3300025250 Bacteria 29341
79 Ga0209129_1000121 3300025258 Bacteria 135404
80 Ga0209233_1000111 3300025261 Bacteria 260262
81 Ga0209233_1028937 3300025261 Bacteria 1323
82 Ga0209676_1000022 3300025292 Bacteria 605659
83 Ga0209025_1000160 3300025294 Bacteria 166795
84 Ga0209758_1000147 3300025297 Bacteria 166795
85 Ga0209050_1000020 3300025298 Bacteria 605671
86 Ga0207655_1133108 3300025728 Bacteria 807
87 Ga0207671_10011251 3300025914 Bacteria 7301
88 Ga0207671_10080749 3300025914 Bacteria 2438
89 Ga0207667_10000033 3300025949 Bacteria 314353
90 Ga0307517_10000255 3300028786 Bacteria 91028
91 Ga0307515_10000077 3300028794 Bacteria 228162
92 Ga0265327_10190543 3300031251 Unclassified 933
93 Ga0307509_10282260 3300031507 Bacteria 1421
94 Ga0307405_10000011 3300031731 Bacteria 241071
95 Ga0307407_10000011 3300031903 Bacteria 174454
96 Ga0307412_10000001 3300031911 Bacteria 822691
97 Ga0307409_100019982 3300031995 Bacteria 4551
98 Ga0307416_100000005 3300032002 Bacteria 477728
99 Ga0307414_10000779 3300032004 Bacteria 16295
100 Ga0307414_10001507 3300032004 Bacteria 12096
101 Ga0307414_10007426 3300032004 Bacteria 6155
102 Ga0307414_10033197 3300032004 Bacteria 3409
103 Ga0307414_10099936 3300032004 Bacteria 2181
104 Ga0307414_10108714 3300032004 Bacteria 2104
105 Ga0307411_10172983 3300032005 Bacteria 1631
106 Ga0307411_10238528 3300032005 Bacteria 1422
107 Ga0395899_0000034 3300037312 Bacteria 302623
108 Ga0466959_0091139 3300045049 Bacteria 2189
109 Ga0495627_047343 3300046453 Bacteria 1304
110 Ga0495585_0000235 3300046492 Bacteria 57308
111 Ga0495607_0131953 3300046501 Bacteria 1299
112 Ga0495606_0059483 3300046507 Bacteria 2451
113 Ga0495606_0118936 3300046507 Bacteria 1583
114 Ga0495610_0000037 3300046512 Bacteria 186354
115 Ga0495610_0000049 3300046512 Bacteria 149009
116 Ga0495637_0064735 3300046520 Bacteria 1490
117 Ga0495633_0036307 3300046558 Bacteria 2362
118 Ga0495625_0000641 3300046660 Bacteria 50345
119 Ga0495625_0032885 3300046660 Bacteria 3840
120 Ga0495625_0076753 3300046660 Bacteria 2335
121 Ga0495658_0037550 3300046683 Bacteria 2678
122 Ga0495670_0419880 3300046691 Unclassified 723
123 Ga0495614_0023281 3300048089 Bacteria 2672
124 Ga0496122_0003323 3300048925 Bacteria 21246
125 Ga0496123_0024483 3300048926 Bacteria 4586
126 Ga0496125_0024490 3300048928 Bacteria 5550
127 nmdc:mga0k408_3876_c1 3300050493 Bacteria 7927
128 Ga0500651_0010980 3300053093 Bacteria 5446
129 Ga0500614_012446 3300053123 Bacteria 1857
130 Ga0500561_0082318 3300053137 Bacteria 940

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046691 Ga0495670_0419880 Ga0495670_0419880_112_660 182
2 3300005530 Ga0070679_100128480 Ga0070679_1001284802 191
3 3300005535 Ga0070684_100141298 Ga0070684_1001412982 193
4 3300028794 Ga0307515_10000077 Ga0307515_1000007754 193
5 3300046660 Ga0495625_0076753 Ga0495625_0076753_23_604 193
6 iso_pu_bacteria 2739367656 2739614823 199
7 3300009093 Ga0105240_10149049 Ga0105240_101490492 201
8 iso_pu_bacteria 2585427687 2586208853 201
9 iso_pu_bacteria 2738541302 2738852574 201
10 iso_pu_bacteria 2739367651 2739591310 201
11 iso_pu_bacteria 2739367663 2739646049 201
12 iso_pu_bacteria 2842722452 2842727466 201
13 iso_pu_bacteria 2842909656 2842913863 201
14 iso_pu_bacteria 2849281842 2849283445 201
15 iso_pu_bacteria 2857627736 2857628266 201
16 iso_pu_bacteria 2904445276 2904447181 201
17 iso_pu_bacteria 2945997725 2945998220 201
18 iso_pu_bacteria 2954016120 2954020679 201
19 iso_pu_bacteria 2738541283 2738759202 202
20 iso_pu_bacteria 2738541284 2738761687 202
21 iso_pu_bacteria 2738543023 2739304295 202
22 iso_pu_bacteria 2852627209 2852627914 202
23 iso_pu_bacteria 2919186247 2919190860 202
24 iso_pu_bacteria 2939664404 2939668930 202
25 iso_pu_bacteria 2818991437 2819549688 203
26 3300017792 Ga0163161_10017427 Ga0163161_100174272 204
27 3300017792 Ga0163161_10086585 Ga0163161_100865852 204
28 3300002773 JGI25152J39213_1000043 JGI25152J39213_100004336 205
29 3300002774 JGI25150J39212_1000023 JGI25150J39212_100002390 205
30 3300003187 JGI25151J46595_10000082 JGI25151J46595_1000008290 205
31 3300003215 JGI25153J46596_10000060 JGI25153J46596_1000006091 205
32 3300003781 Ga0055536_1000002 Ga0055536_1000002386 205
33 3300003791 Ga0055530_10002029 Ga0055530_100020297 205
34 3300005288 Ga0065714_10010468 Ga0065714_100104683 205
35 3300005288 Ga0065714_10064616 Ga0065714_1006461620 205
36 3300009036 Ga0105244_10085940 Ga0105244_100859401 205
37 3300013102 Ga0157371_10000025 Ga0157371_10000025130 205
38 3300013102 Ga0157371_10288153 Ga0157371_102881532 205
39 3300013104 Ga0157370_10025515 Ga0157370_100255153 205
40 3300013104 Ga0157370_10032232 Ga0157370_100322322 205
41 3300013104 Ga0157370_10110088 Ga0157370_101100881 205
42 3300013104 Ga0157370_10845561 Ga0157370_108455611 205
43 3300013105 Ga0157369_10000038 Ga0157369_10000038137 205
44 3300013105 Ga0157369_10598474 Ga0157369_105984741 205
45 3300013306 Ga0163162_10000102 Ga0163162_1000010252 205
46 3300013308 Ga0157375_10193844 Ga0157375_101938442 205
47 3300014497 Ga0182008_10000309 Ga0182008_100003095 205
48 3300015261 Ga0182006_1000076 Ga0182006_100007687 205
49 3300015261 Ga0182006_1000131 Ga0182006_100013118 205
50 3300015262 Ga0182007_10000059 Ga0182007_1000005919 205
51 3300015682 Ga0183373_1002 Ga0183373_1002173 205
52 3300017792 Ga0163161_10001426 Ga0163161_100014268 205
53 3300017792 Ga0163161_10011583 Ga0163161_100115832 205
54 3300025245 Ga0207425_1000051 Ga0207425_1000051123 205
55 3300025258 Ga0209129_1000121 Ga0209129_100012190 205
56 3300025292 Ga0209676_1000022 Ga0209676_1000022151 205
57 3300025294 Ga0209025_1000160 Ga0209025_100016037 205
58 3300025297 Ga0209758_1000147 Ga0209758_100014737 205
59 3300025298 Ga0209050_1000020 Ga0209050_1000020389 205
60 3300025728 Ga0207655_1133108 Ga0207655_11331081 205
61 3300031731 Ga0307405_10000011 Ga0307405_10000011184 205
62 3300031903 Ga0307407_10000011 Ga0307407_1000001120 205
63 3300031995 Ga0307409_100019982 Ga0307409_1000199825 205
64 3300032002 Ga0307416_100000005 Ga0307416_100000005392 205
65 3300032004 Ga0307414_10001507 Ga0307414_100015072 205
66 3300032005 Ga0307411_10238528 Ga0307411_102385282 205
67 3300046453 Ga0495627_047343 Ga0495627_047343_435_1079 205
68 3300046507 Ga0495606_0059483 Ga0495606_0059483_716_1360 205
69 3300046512 Ga0495610_0000037 Ga0495610_0000037_154031_154675 205
70 3300046512 Ga0495610_0000049 Ga0495610_0000049_65041_65685 205
71 3300046520 Ga0495637_0064735 Ga0495637_0064735_209_853 205
72 3300046558 Ga0495633_0036307 Ga0495633_0036307_593_1237 205
73 3300003323 rootH1_10298031 rootH1_102980313 206
74 3300005288 Ga0065714_10003052 Ga0065714_100030523 206
75 3300005288 Ga0065714_10005878 Ga0065714_100058785 206
76 3300005288 Ga0065714_10073894 Ga0065714_100738942 206
77 3300005288 Ga0065714_10103487 Ga0065714_101034872 206
78 3300005288 Ga0065714_10211836 Ga0065714_102118361 206
79 3300005289 Ga0065704_10003126 Ga0065704_100031264 206
80 3300005289 Ga0065704_10074605 Ga0065704_100746052 206
81 3300009545 Ga0105237_10003060 Ga0105237_1000306015 206
82 3300013100 Ga0157373_10001629 Ga0157373_100016292 206
83 3300013100 Ga0157373_10002256 Ga0157373_100022562 206
84 3300013100 Ga0157373_10005432 Ga0157373_100054326 206
85 3300013102 Ga0157371_10005932 Ga0157371_1000593211 206
86 3300013102 Ga0157371_10011303 Ga0157371_100113032 206
87 3300013102 Ga0157371_10115077 Ga0157371_101150773 206
88 3300013104 Ga0157370_10001766 Ga0157370_100017663 206
89 3300013104 Ga0157370_10065282 Ga0157370_100652823 206
90 3300013104 Ga0157370_10135594 Ga0157370_101355942 206
91 3300013104 Ga0157370_10188063 Ga0157370_101880632 206
92 3300013104 Ga0157370_10203654 Ga0157370_102036541 206
93 3300013105 Ga0157369_10014801 Ga0157369_100148012 206
94 3300013308 Ga0157375_10059958 Ga0157375_100599582 206
95 3300014497 Ga0182008_10000002 Ga0182008_100000029 206
96 3300014497 Ga0182008_10000458 Ga0182008_100004588 206
97 3300014497 Ga0182008_10022129 Ga0182008_100221292 206
98 3300015261 Ga0182006_1000334 Ga0182006_100033431 206
99 3300015261 Ga0182006_1002342 Ga0182006_10023428 206
100 3300017792 Ga0163161_10003856 Ga0163161_100038567 206
101 3300017792 Ga0163161_10018202 Ga0163161_100182022 206
102 3300017792 Ga0163161_10050777 Ga0163161_100507771 206
103 3300025914 Ga0207671_10011251 Ga0207671_100112512 206
104 3300031911 Ga0307412_10000001 Ga0307412_10000001693 206
105 3300032004 Ga0307414_10000779 Ga0307414_100007798 206
106 3300032004 Ga0307414_10007426 Ga0307414_100074262 206
107 3300032004 Ga0307414_10033197 Ga0307414_100331974 206
108 3300032004 Ga0307414_10099936 Ga0307414_100999362 206
109 3300032004 Ga0307414_10108714 Ga0307414_101087142 206
110 3300032005 Ga0307411_10172983 Ga0307411_101729832 206
111 3300046501 Ga0495607_0131953 Ga0495607_0131953_133_765 206
112 3300048925 Ga0496122_0003323 Ga0496122_0003323_4581_5213 206
113 3300048926 Ga0496123_0024483 Ga0496123_0024483_3124_3756 206
114 3300048928 Ga0496125_0024490 Ga0496125_0024490_4322_4954 206
115 3300053093 Ga0500651_0010980 Ga0500651_0010980_2234_2866 206
116 3300003323 rootH1_10221730 rootH1_102217303 207
117 3300005329 Ga0070683_100250313 Ga0070683_1002503132 207
118 3300013100 Ga0157373_10001824 Ga0157373_100018246 207
119 3300013297 Ga0157378_10034984 Ga0157378_100349843 207
120 3300013307 Ga0157372_10061910 Ga0157372_100619103 207
121 3300025250 Ga0209026_1000486 Ga0209026_10004864 207
122 3300025261 Ga0209233_1028937 Ga0209233_10289371 207
123 3300028786 Ga0307517_10000255 Ga0307517_1000025543 207
124 3300031251 Ga0265327_10190543 Ga0265327_101905432 207
125 3300037312 Ga0395899_0000034 Ga0395899_0000034_156762_157385 207
126 3300045049 Ga0466959_0091139 Ga0466959_0091139_1241_1864 207
127 3300046492 Ga0495585_0000235 Ga0495585_0000235_13254_13877 207
128 3300046507 Ga0495606_0118936 Ga0495606_0118936_447_1073 207
129 3300046660 Ga0495625_0000641 Ga0495625_0000641_6643_7266 207
130 3300046660 Ga0495625_0032885 Ga0495625_0032885_3073_3696 207
131 3300046683 Ga0495658_0037550 Ga0495658_0037550_46_669 207
132 3300048089 Ga0495614_0023281 Ga0495614_0023281_1961_2584 207
133 3300050493 nmdc:mga0k408_3876_c1 nmdc:mga0k408_3876_c1_5139_5762 207
134 3300053123 Ga0500614_012446 Ga0500614_012446_923_1546 207
135 3300053137 Ga0500561_0082318 Ga0500561_0082318_118_741 207
136 3300002772 JGI25164J39214_1001364 JGI25164J39214_10013645 208
137 3300003214 JGI25165J46597_1001953 JGI25165J46597_10019535 208
138 3300003323 rootH1_10251518 rootH1_102515182 208
139 3300005563 Ga0068855_100000060 Ga0068855_100000060109 208
140 3300009545 Ga0105237_10029798 Ga0105237_100297984 208
141 3300009551 Ga0105238_10437723 Ga0105238_104377231 208
142 3300010375 Ga0105239_10003817 Ga0105239_100038173 208
143 3300013296 Ga0157374_10378098 Ga0157374_103780982 208
144 3300025231 Ga0207427_100091 Ga0207427_10009193 208
145 3300025233 Ga0209437_100026 Ga0209437_100026200 208
146 3300025261 Ga0209233_1000111 Ga0209233_100011194 208
147 3300025914 Ga0207671_10080749 Ga0207671_100807492 208
148 3300025949 Ga0207667_10000033 Ga0207667_10000033180 208
149 3300031507 Ga0307509_10282260 Ga0307509_102822602 208

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02581

TMP-TENI

Thiamine monophosphate synthase

25

204

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xi3-assembly1.cif.gz_B thiamine phosphate pyrophosphorylase from pyrococcus furiosus pfu-1255191-001 0.9251 7 207
1g4t-assembly1.cif.gz_A thiamin phosphate synthase 0.9116 7 207
1g4e-assembly1.cif.gz_A thiamin phosphate synthase 0.8964 7 207
3nl3-assembly1.cif.gz_A the crystal structure of candida glabrata thi6, a bifunctional enzyme involved in thiamin biosyhthesis of eukaryotes 0.8937 7 206
1g67-assembly1.cif.gz_A thiamin phosphate synthase 0.8913 1 207
ID Description Score Start End Superfamily
1xi3B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9251 7 207 3.20.20.70
af_A0A1D6MYJ2_339_548_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9061 8 207 3.20.20.70
af_P40386_1_220_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9008 1 208 3.20.20.70
af_Q5AEJ1_1_231_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8984 2 208 3.20.20.70
af_P40386_1_220_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8967 1 208 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A223NRQ4-F1-model_v4 Thiamine phosphate synthase 0.9989 1 208 GO:0004789
GO:0005737
GO:0009228
GO:0046872
AF-A0A316H6M5-F1-model_v4 Thiamine-phosphate pyrophosphorylase 0.9849 1 208 GO:0004789
GO:0005737
GO:0009228
GO:0046872
AF-A0A316H6M5-F1-model_v4 Thiamine-phosphate pyrophosphorylase 0.9803 1 208 GO:0004789
GO:0005737
GO:0009228
GO:0046872
AF-A0A1I2D357-F1-model_v4 Thiamine-phosphate diphosphorylase 0.978 1 208 GO:0004789
GO:0005737
GO:0009228
GO:0046872
AF-A0A1I2D357-F1-model_v4 Thiamine-phosphate diphosphorylase 0.9734 1 208 GO:0004789
GO:0005737
GO:0009228
GO:0046872

Feature Viewer

pLDDT pTM Quality
95.83 0.91 High
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Predicted Structure (AlphaFold2)

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