F203298

General Info

Members Datasets Scaffolds Average Seq Length
148 102 296 361

Family's Representative Sequence

Representative Sequence 3300025229|Ga0209147_104571|Ga0209147_1045713
Length 375
Sequence MAEMIRSFRSKMILLFGLSMLFSGSITYSLYKILQMYYHTTKYEDPLTKVRFFMREVGDINCFLLIFIPLSVLFFFLLTKRYAMYFHEISNGIYQLANGDFNSRIYIPTNDEFGDIARDINLASEKLKQAVERGDFAETSKEQLILNLAHDLRTPLTSVLGYLDFILKDDQLSQEQVQHYTSIAFTKSQRLEKLIDELFEVTRMNYGKLTIEMNPLDLSELLSQMNEELYPLFEKNNLITRLEVAPGLNIRGDGDMLARVFENLLTNAVRYGKDGKFIDIIGHKEEKEVVVQVVNYGDPVPSDELPHIFDMFYTGDKARTHQEGSTGLGLFIAKNIVVKHHGTISAQSSLIRTLFEVRLPAEGSASGPKANSRQE

Samples

Sample ID Description Type Environment
1 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
5 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
6 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
7 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
8 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
9 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
10 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
11 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
12 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
13 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
14 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
15 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
16 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
17 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
21 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
22 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
23 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
24 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
25 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
26 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
27 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
28 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
29 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
30 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
31 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
32 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
33 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
34 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
35 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
36 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
37 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
38 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
39 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
40 2643221729 Bacillus sp. Root11 Isolate Unclassified
41 2643221730 Bacillus sp. Root131 Isolate Unclassified
42 2671180694 Paenibacillus sp. A3 Isolate Unclassified
43 2684622632 Bacillus cereus 905 Isolate Unclassified
44 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
45 2738541358 Bacillus sp. OV752 Isolate Unclassified
46 2738543006 Bacillus sp. OK077 Isolate Unclassified
47 2738543017 Bacillus sp. OV186 Isolate Unclassified
48 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
49 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
50 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
51 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
52 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
53 2818991441 Niallia circulans 3243 Isolate Rhizosphere
54 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
55 2818991459 Paenibacillus sp. 597 Isolate Unclassified
56 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
57 2842682962 Bacillus sp. R-72492 Isolate Unclassified
58 2849139964 Bacillus sp. R-71875 Isolate Unclassified
59 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
60 2857581216 Bacillus sp. R-71922 Isolate Unclassified
61 2857586860 Bacillus sp. R-71935 Isolate Unclassified
62 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
63 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
64 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
65 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
66 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
67 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
68 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
69 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
70 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
71 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
72 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
73 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
74 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
75 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
76 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
77 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
78 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
79 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
80 2938917290 Bacillus sp. CR71 Isolate Unclassified
81 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
82 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
83 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
84 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
85 2965761152 Bacillus sp. COPE52 Isolate Unclassified
86 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
87 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
88 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
89 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
90 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
91 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
92 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
93 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
94 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
95 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
96 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
97 8023438354 Bacillus sp. BH2 Isolate Unclassified
98 8023444577 Bacillus sp. BH32 Isolate Unclassified
99 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
100 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
101 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
102 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 50
Metatranscriptomes 0
Isolates 50

Biome Distribution

Category Percentage (%)
Aerial Root 1.35
Bulb 0
Endosphere 28.38
Nodule 2.03
Rhizoplane 2.7
Rhizosphere 29.05
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209147_104571 3300025229 Bacteria 2266
2 JGI25162J39368_1007276 3300002737 Bacteria 1752
3 JGI25151J46595_10002165 3300003187 Bacteria 12176
4 JGI25151J46595_10002827 3300003187 Bacteria 10024
5 JGI25151J46595_10009514 3300003187 Bacteria 4594
6 JGI25151J46595_10012868 3300003187 Bacteria 3785
7 JGI25151J46595_10015857 3300003187 Bacteria 3308
8 JGI25151J46595_10021966 3300003187 Bacteria 2658
9 JGI25151J46595_10054323 3300003187 Bacteria 1329
10 JGI25151J46595_10058413 3300003187 Bacteria 1249
11 JGI25151J46595_10060058 3300003187 Bacteria 1219
12 Ga0055535_1003822 3300003761 Bacteria 3993
13 Ga0055541_1001229 3300003841 Bacteria 5671
14 Ga0055541_1004451 3300003841 Bacteria 2540
15 Ga0105251_10099027 3300009011 Bacteria 1333
16 Ga0105244_10007460 3300009036 Bacteria 6953
17 Ga0105244_10013302 3300009036 Bacteria 4816
18 Ga0105244_10024579 3300009036 Bacteria 3286
19 Ga0105250_10005652 3300009092 Bacteria 5584
20 Ga0105250_10020967 3300009092 Bacteria 2639
21 Ga0105250_10106680 3300009092 Bacteria 1145
22 Ga0105246_10001680 3300011119 Bacteria 13179
23 Ga0105246_10085353 3300011119 Bacteria 2261
24 Ga0209566_100022 3300025225 Bacteria 403259
25 Ga0209566_100052 3300025225 Bacteria 231848
26 Ga0209566_100103 3300025225 Bacteria 130803
27 Ga0209147_100020 3300025229 Bacteria 474055
28 Ga0209437_100875 3300025233 Bacteria 12280
29 Ga0209258_103778 3300025242 Bacteria 3115
30 Ga0209130_1000908 3300025284 Bacteria 23899
31 Ga0209130_1003217 3300025284 Bacteria 7185
32 Ga0209675_1015092 3300025291 Bacteria 2313
33 Ga0209676_1000274 3300025292 Bacteria 107505
34 Ga0209676_1011008 3300025292 Bacteria 3698
35 Ga0209025_1000156 3300025294 Bacteria 168932
36 Ga0209025_1000465 3300025294 Bacteria 79330
37 Ga0209025_1000851 3300025294 Bacteria 48307
38 Ga0209025_1001029 3300025294 Bacteria 40908
39 Ga0209025_1002412 3300025294 Bacteria 19909
40 Ga0209025_1004945 3300025294 Bacteria 11185
41 Ga0209025_1008830 3300025294 Bacteria 7158
42 Ga0209025_1009022 3300025294 Bacteria 7038
43 Ga0209025_1010524 3300025294 Bacteria 6255
44 Ga0209025_1010574 3300025294 Bacteria 6235
45 Ga0209025_1010864 3300025294 Bacteria 6102
46 Ga0209025_1012438 3300025294 Bacteria 5452
47 Ga0209025_1012894 3300025294 Bacteria 5313
48 Ga0209025_1018358 3300025294 Bacteria 3971
49 Ga0209025_1027549 3300025294 Bacteria 2815
50 Ga0209025_1031005 3300025294 Bacteria 2541
51 Ga0209025_1036934 3300025294 Bacteria 2177
52 Ga0207696_1000583 3300025711 Bacteria 28351
53 Ga0207696_1003331 3300025711 Bacteria 7389
54 Ga0207696_1008140 3300025711 Bacteria 4042
55 Ga0207696_1050998 3300025711 Bacteria 1183
56 Ga0207655_1001501 3300025728 Bacteria 21321
57 Ga0207655_1011380 3300025728 Bacteria 5301
58 Ga0207655_1018683 3300025728 Bacteria 3662
59 Ga0207713_1007927 3300025735 Bacteria 6189
60 Ga0237817_10320 3300030083 Bacteria 9632
61 Ga0237819_00060 3300038705 Bacteria 38240
62 Ga0237819_00422 3300038705 Bacteria 14548
63 Ga0466967_0012491 3300045976 Bacteria 6500
64 Ga0495590_0067809 3300046457 Bacteria 1250
65 Ga0495660_0141437 3300046810 Bacteria 1197
66 Ga0495626_0038679 3300048091 Bacteria 2261
67 Ga0496103_0111894 3300048906 Bacteria 1735
68 Ga0496110_0005627 3300048913 Bacteria 9830
69 Ga0496111_0071247 3300048914 Bacteria 2530
70 Ga0496116_0007582 3300048919 Bacteria 9590
71 Ga0496122_0034374 3300048925 Bacteria 4149
72 Ga0496122_0099017 3300048925 Bacteria 1956
73 Ga0496124_0074058 3300048927 Bacteria 2816
74 Ga0496125_0006400 3300048928 Bacteria 12755
75 2512636193 2512564013 Bacteria 6286191
76 2512637413 2512564013 Bacteria 6286191
77 2524187418 2524023129 Bacteria 6762600
78 2553397114 2551306519 Bacteria 5465154
79 2595090229 2593339131 Bacteria 5116855
80 2595315718 2593339198 Bacteria 7267884
81 2643738559 2643221543 Bacteria 6628015
82 2644424131 2643221676 Bacteria 8119172
83 2644706157 2643221729 Bacteria 6621700
84 2644712839 2643221730 Bacteria 6523787
85 2673820262 2671180694 Bacteria 7506943
86 2685152833 2684622632 Bacteria 5380049
87 2698320341 2695420987 Bacteria 6152737
88 2739157389 2738541358 Bacteria 5932299
89 2739209482 2738543006 Bacteria 5904091
90 2739270485 2738543017 Bacteria 4271950
91 2745167665 2744054657 Bacteria 5016802
92 2757567455 2757320391 Bacteria 4746095
93 2777836661 2775507192 Bacteria 4622234
94 2816864831 2816332186 Bacteria 5331395
95 2817618963 2816332336 Bacteria 5207640
96 2819569231 2818991441 Bacteria 5062707
97 2819581745 2818991443 Bacteria 6598732
98 2819673857 2818991459 Bacteria 8736032
99 2821118106 2821111986 Bacteria 6894338
100 2842683682 2842682962 Bacteria 5589973
101 2849142248 2849139964 Bacteria 5613304
102 2857454330 2857453340 Bacteria 8090534
103 2857585801 2857581216 Bacteria 5522813
104 2857590704 2857586860 Bacteria 4354574
105 2857593826 2857591370 Bacteria 6569758
106 2864738511 2864733723 Bacteria 6770668
107 2881644641 2881644220 Bacteria 5302661
108 2885528502 2885526491 Bacteria 7164189
109 2889043203 2889042446 Bacteria 7618936
110 2889049760 2889049205 Bacteria 7524325
111 2904114373 2904113452 Bacteria 7796941
112 2904168419 2904162308 Bacteria 7086713
113 2904496790 2904490793 Bacteria 7046938
114 2907204006 2907202186 Bacteria 6632024
115 2915599134 2915597211 Bacteria 6475886
116 2919166074 2919160200 Bacteria 6929020
117 2929189720 2929183550 Bacteria 6377511
118 2929211697 2929206907 Bacteria 5918291
119 2929238538 2929233124 Bacteria 5948380
120 2931386663 2931384279 Bacteria 7299545
121 2936342461 2936340661 Bacteria 5139038
122 2936366371 2936361878 Bacteria 5632809
123 2938922736 2938917290 Bacteria 5914775
124 2939684916 2939679117 Bacteria 6921672
125 2945994727 2945991243 Bacteria 7008369
126 2946057522 2946053406 Bacteria 6978655
127 2947431610 2947426588 Bacteria 5357194
128 2965761658 2965761152 Bacteria 5806513
129 2965766034 2965761152 Bacteria 5806513
130 2971409618 2971403814 Bacteria 7370929
131 2971415281 2971410472 Bacteria 8311090
132 2979088525 2979083700 Bacteria 5894929
133 2984528055 2984527788 Bacteria 5288478
134 2984534165 2984532647 Bacteria 5288506
135 3001269711 3001267043 Bacteria 4823521
136 3001275056 3001272096 Bacteria 4729684
137 3006827835 3006826541 Bacteria 4678913
138 3006990813 3006988479 Bacteria 4767936
139 8002324306 8002317523 Bacteria 8051857
140 8022624794 8022621104 Bacteria 5241040
141 8023439255 8023438354 Bacteria 5779374
142 8023445743 8023444577 Bacteria 5661597
143 8046999204 8046991243 Bacteria 8497463
144 8054797701 8054795415 Bacteria 9785225
145 8054803290 8054795415 Bacteria 9785225
146 8055635265 8055632911 Bacteria 5283357
147 8055636272 8055632911 Bacteria 5283357
148 8056540657 8056533031 Bacteria 8964429
149 Ga0209147_104571
150 JGI25162J39368_1007276
151 JGI25151J46595_10002165
152 JGI25151J46595_10002827
153 JGI25151J46595_10009514
154 JGI25151J46595_10012868
155 JGI25151J46595_10015857
156 JGI25151J46595_10021966
157 JGI25151J46595_10054323
158 JGI25151J46595_10058413
159 JGI25151J46595_10060058
160 Ga0055535_1003822
161 Ga0055541_1001229
162 Ga0055541_1004451
163 Ga0105251_10099027
164 Ga0105244_10007460
165 Ga0105244_10013302
166 Ga0105244_10024579
167 Ga0105250_10005652
168 Ga0105250_10020967
169 Ga0105250_10106680
170 Ga0105246_10001680
171 Ga0105246_10085353
172 Ga0209566_100022
173 Ga0209566_100052
174 Ga0209566_100103
175 Ga0209147_100020
176 Ga0209437_100875
177 Ga0209258_103778
178 Ga0209130_1000908
179 Ga0209130_1003217
180 Ga0209675_1015092
181 Ga0209676_1000274
182 Ga0209676_1011008
183 Ga0209025_1000156
184 Ga0209025_1000465
185 Ga0209025_1000851
186 Ga0209025_1001029
187 Ga0209025_1002412
188 Ga0209025_1004945
189 Ga0209025_1008830
190 Ga0209025_1009022
191 Ga0209025_1010524
192 Ga0209025_1010574
193 Ga0209025_1010864
194 Ga0209025_1012438
195 Ga0209025_1012894
196 Ga0209025_1018358
197 Ga0209025_1027549
198 Ga0209025_1031005
199 Ga0209025_1036934
200 Ga0207696_1000583
201 Ga0207696_1003331
202 Ga0207696_1008140
203 Ga0207696_1050998
204 Ga0207655_1001501
205 Ga0207655_1011380
206 Ga0207655_1018683
207 Ga0207713_1007927
208 Ga0237817_10320
209 Ga0237819_00060
210 Ga0237819_00422
211 Ga0466967_0012491
212 Ga0495590_0067809
213 Ga0495660_0141437
214 Ga0495626_0038679
215 Ga0496103_0111894
216 Ga0496110_0005627
217 Ga0496111_0071247
218 Ga0496116_0007582
219 Ga0496122_0034374
220 Ga0496122_0099017
221 Ga0496124_0074058
222 Ga0496125_0006400
223 2512636193
224 2512637413
225 2524187418
226 2553397114
227 2595090229
228 2595315718
229 2643738559
230 2644424131
231 2644706157
232 2644712839
233 2673820262
234 2685152833
235 2698320341
236 2739157389
237 2739209482
238 2739270485
239 2745167665
240 2757567455
241 2777836661
242 2816864831
243 2817618963
244 2819569231
245 2819581745
246 2819673857
247 2821118106
248 2842683682
249 2849142248
250 2857454330
251 2857585801
252 2857590704
253 2857593826
254 2864738511
255 2881644641
256 2885528502
257 2889043203
258 2889049760
259 2904114373
260 2904168419
261 2904496790
262 2907204006
263 2915599134
264 2919166074
265 2929189720
266 2929211697
267 2929238538
268 2931386663
269 2936342461
270 2936366371
271 2938922736
272 2939684916
273 2945994727
274 2946057522
275 2947431610
276 2965761658
277 2965766034
278 2971409618
279 2971415281
280 2979088525
281 2984528055
282 2984534165
283 3001269711
284 3001275056
285 3006827835
286 3006990813
287 8002324306
288 8022624794
289 8023439255
290 8023445743
291 8046999204
292 8054797701
293 8054803290
294 8055635265
295 8055636272
296 8056540657

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00672

HAMP

HAMP domain

85

129

0.93

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

252

363

0.9

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

140

207

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dx0-assembly2.cif.gz_B vansc ca domain 0.9197 203 351
8dwz-assembly1.cif.gz_A ca domain of vansa histidine kinase, 7 kev data 0.9188 203 351
8dwz-assembly1.cif.gz_A ca domain of vansa histidine kinase, 7 kev data 0.9122 203 351
3a0z-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.9109 201 350
8dx0-assembly2.cif.gz_B vansc ca domain 0.9071 203 351
ID Description Score Start End Superfamily
af_P9WGK5_228_381_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9494 201 352 3.30.565.10
af_P77485_332_480_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9478 201 349 3.30.565.10
af_Q2FXN7_398_551_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9472 201 351 3.30.565.10
af_Q2FVQ8_303_454_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9412 203 349 3.30.565.10
af_Q2FY80_429_583_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9361 200 352 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A158DRZ5-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9427 176 352 GO:0000155
AF-A0A534D1U0-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9316 181 352 GO:0000155
AF-A0A7Y1VUM9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9316 180 352 GO:0000155
GO:0003700
GO:0043565
AF-A0A4Q5ZHV8-F1-model_v4 deleted 0.9291 175 352
AF-A0A135L2W8-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9273 181 352 GO:0000155
GO:0005524
GO:0005886
GO:0009927

Map