F199381

General Info

Members Datasets Scaffolds Average Seq Length
147 109 294 519

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100001945|Ga0070690_1000019458
Length 560
Sequence MRPVVEVCNAKLLVCVRADKPRSPNHPIRKLTVCATLFMIFRGPFPNVSIPEVPLTEFVLARARELGDKPALIEGPTGRIITYSELARAIPRAAAGLAQRGFKQHDVLGIISSNTPEYAICFHAVASLGGINTPINPLYTEHEIAHQLKDAGAKFLVAGPTFLDKARAAADEAGITEFFVFGEAEGAIPFSSLLENDGEAPYVRINPVEDLVALPYSSGTTGLPKGVMLTHHNLVSNLRQMEGLDYFTENDTLLCVLPLFHIYGLVVILNMGLYMGATIVMMPRFDLEQFLKSVTQYRVTLAHLVPPIVLALSKNPIVDDYDLSSLKAIFSGAAPLDENLTRACNQRLNLSIRQGYGMTETSPVTHSSPADPASVKYGSVGFAAPNTECKIIDLETGEPLKPNKEGELCVRGPQIMKGYLNRPDATAATIDSERWLHTGDIAYVDEDGHFFIVDRAKELIKYKGFQVPPAELEALLLTHHSVADAAVIPCPDEEAGEVPKAFVVLREEATAEELMDFVEQRVAPHKKLRFLEFTDKIPKSASGKILRRMLVQAEREKRNN

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
55 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
56 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
62 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
63 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
64 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
65 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
66 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
67 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
70 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
71 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
72 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
73 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
81 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
82 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
83 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
103 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
104 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.32
Metatranscriptomes 0.68
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.08
Rhizosphere 86.39
Stem 0
Stem Tuber 0
Unclassified 4.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100001945 3300005330 Bacteria 10988
2 JGI25406J46586_10001048 3300003203 Bacteria 12951
3 Ga0070683_100010264 3300005329 Bacteria 8050
4 Ga0068869_100079822 3300005334 Bacteria 2439
5 Ga0070669_100038990 3300005353 Unclassified 3451
6 Ga0070671_100000780 3300005355 Bacteria 22917
7 Ga0070714_100026567 3300005435 Bacteria 4785
8 Ga0070713_100116775 3300005436 Bacteria 2334
9 Ga0070710_10027761 3300005437 Bacteria 3022
10 Ga0070708_100016410 3300005445 Bacteria 6144
11 Ga0070708_100052805 3300005445 Bacteria 3605
12 Ga0070706_100010383 3300005467 Bacteria 8649
13 Ga0070706_100043838 3300005467 Bacteria 4132
14 Ga0070706_100073921 3300005467 Bacteria 3156
15 Ga0070699_100015656 3300005518 Bacteria 6513
16 Ga0070699_100131858 3300005518 Bacteria 2203
17 Ga0070684_100033781 3300005535 Bacteria 4370
18 Ga0070697_100000118 3300005536 Bacteria 62151
19 Ga0070697_100148491 3300005536 Bacteria 1975
20 Ga0070695_100006759 3300005545 Bacteria 6789
21 Ga0070664_100017565 3300005564 Bacteria 5875
22 Ga0068870_10074192 3300005840 Bacteria 1863
23 Ga0081455_10057024 3300005937 Bacteria 3313
24 Ga0081538_10006034 3300005981 Bacteria 10768
25 Ga0081538_10006372 3300005981 Bacteria 10411
26 Ga0081540_1014822 3300005983 Bacteria 4966
27 Ga0081539_10000165 3300005985 Bacteria 153824
28 Ga0070717_10018919 3300006028 Bacteria 5390
29 Ga0070712_100008433 3300006175 Bacteria 6485
30 Ga0075428_100081936 3300006844 Bacteria 3520
31 Ga0075428_100144182 3300006844 Bacteria 2589
32 Ga0075430_100003953 3300006846 Bacteria 12499
33 Ga0075430_100029343 3300006846 Bacteria 4668
34 Ga0075431_100002392 3300006847 Bacteria 18042
35 Ga0075431_100052495 3300006847 Bacteria 4205
36 Ga0075433_10002253 3300006852 Bacteria 14647
37 Ga0075433_10006542 3300006852 Bacteria 9218
38 Ga0075434_100027118 3300006871 Bacteria 5622
39 Ga0075434_100184223 3300006871 Bacteria 2109
40 Ga0114129_10027729 3300009147 Bacteria 8019
41 Ga0114129_10040316 3300009147 Bacteria 6583
42 Ga0114129_10285453 3300009147 Bacteria 2204
43 Ga0105249_10013978 3300009553 Bacteria 7096
44 Ga0105249_10024931 3300009553 Bacteria 5381
45 Ga0157369_10014155 3300013105 Bacteria 9013
46 Ga0157378_10213939 3300013297 Unclassified 1829
47 Ga0163163_10021118 3300014325 Bacteria 6142
48 Ga0157380_10004728 3300014326 Bacteria 9478
49 Ga0157380_10014485 3300014326 Bacteria 5769
50 Ga0213876_10010424 3300021384 Bacteria 4987
51 Ga0213876_10010538 3300021384 Bacteria 4955
52 Ga0213876_10073034 3300021384 Bacteria 1811
53 Ga0224712_10004829 3300022467 Bacteria 3682
54 Ga0207693_10015811 3300025915 Bacteria 6045
55 Ga0207663_10038610 3300025916 Bacteria 2888
56 Ga0207660_10125180 3300025917 Bacteria 1951
57 Ga0207646_10108362 3300025922 Bacteria 2492
58 Ga0207700_10109018 3300025928 Bacteria 2224
59 Ga0207664_10100759 3300025929 Bacteria 2385
60 Ga0207689_10080339 3300025942 Bacteria 2680
61 Ga0207712_10039951 3300025961 Unclassified 3217
62 Ga0207678_10044180 3300026067 Bacteria 3855
63 Ga0207702_10056740 3300026078 Bacteria 3326
64 Ga0207674_10001881 3300026116 Bacteria 26738
65 Ga0307408_100059891 3300031548 Bacteria 2773
66 Ga0307405_10022164 3300031731 Bacteria 3586
67 Ga0307413_10018403 3300031824 Bacteria 3665
68 Ga0307410_10027587 3300031852 Bacteria 3590
69 Ga0307409_100047510 3300031995 Bacteria 3258
70 Ga0307416_100010643 3300032002 Bacteria 6090
71 Ga0307416_100061219 3300032002 Bacteria 3070
72 Ga0307416_100066087 3300032002 Bacteria 2976
73 Ga0307411_10020479 3300032005 Bacteria 3848
74 Ga0373961_0001291 3300035241 Bacteria 7632
75 Ga0373935_0000981 3300035692 Bacteria 15494
76 Ga0373937_0002198 3300036401 Bacteria 16294
77 Ga0436364_0266465 3300037853 Bacteria 31259
78 Ga0436364_0516308 3300037853 Bacteria 7233
79 Ga0436364_1358833 3300037853 Bacteria 6092
80 Ga0395901_0048973 3300038443 Bacteria 4389
81 Ga0436365_0032912 3300039437 Bacteria 5655
82 Ga0436365_0908272 3300039437 Bacteria 14846
83 Ga0436365_1262337 3300039437 Bacteria 30999
84 Ga0436363_0642699 3300039450 Bacteria 3124
85 Ga0436363_0705575 3300039450 Bacteria 3521
86 Ga0436363_1103592 3300039450 Bacteria 3707
87 Ga0436363_1362132 3300039450 Bacteria 5007
88 Ga0436363_1663746 3300039450 Bacteria 7346
89 Ga0436362_0295297 3300039453 Bacteria 2625
90 Ga0439451_004995 3300042009 Bacteria 2699
91 Ga0439454_002392 3300042011 Bacteria 1971
92 Ga0439464_0005016 3300042439 Bacteria 3404
93 Ga0439440_0003696 3300042993 Bacteria 2970
94 Ga0466970_0073746 3300044765 Bacteria 1837
95 Ga0466967_0005705 3300045976 Bacteria 8681
96 Ga0495651_0005043 3300046462 Bacteria 10085
97 Ga0495608_0001629 3300046511 Bacteria 16110
98 Ga0495663_0000321 3300046525 Bacteria 17952
99 Ga0495598_0000127 3300046537 Bacteria 12842
100 Ga0495621_0000325 3300046539 Bacteria 11598
101 Ga0495645_0105289 3300046543 Bacteria 2002
102 Ga0495667_0001407 3300046559 Bacteria 15817
103 Ga0495625_0102861 3300046660 Bacteria 1960
104 Ga0495657_0004624 3300046675 Bacteria 10989
105 Ga0495599_0083569 3300046678 Bacteria 1994
106 Ga0495600_0025745 3300046809 Bacteria 3792
107 Ga0495604_0002105 3300047317 Bacteria 16019
108 Ga0495674_0112133 3300047319 Bacteria 2311
109 Ga0495680_0003311 3300047322 Bacteria 15953
110 Ga0495602_0006882 3300048088 Bacteria 11950
111 Ga0496104_0016813 3300048907 Bacteria 6648
112 Ga0496105_0007583 3300048908 Bacteria 8409
113 Ga0496110_0189236 3300048913 Bacteria 1869
114 Ga0496110_0205909 3300048913 Bacteria 1788
115 Ga0496112_0038709 3300048915 Bacteria 4658
116 Ga0496114_0000017 3300048917 Bacteria 272402
117 Ga0501040_0136804 3300049576 Unclassified 1725
118 Ga0501041_0049041 3300049577 Unclassified 2572
119 Ga0501042_0092628 3300049578 Unclassified 2170
120 Ga0501047_0057873 3300049581 Bacteria 3747
121 Ga0501071_0113566 3300049587 Bacteria 2003
122 Ga0501075_0004038 3300049591 Bacteria 9901
123 Ga0501076_0085256 3300049592 Bacteria 2538
124 Ga0501076_0142859 3300049592 Bacteria 1945
125 Ga0501077_0011715 3300049593 Bacteria 5481
126 Ga0501079_0013536 3300049741 Bacteria 6222
127 Ga0501079_0099727 3300049741 Bacteria 2251
128 Ga0501083_0044034 3300049744 Bacteria 3022
129 Ga0501045_0031183 3300049824 Unclassified 3861
130 Ga0501045_0083069 3300049824 Bacteria 2362
131 nmdc:mga05p37_1096_c1 3300050507 Bacteria 31105
132 nmdc:mga05p37_31843_c1 3300050507 Bacteria 6445
133 nmdc:mga06r32_30290_c1 3300050510 Bacteria 5078
134 nmdc:mga06r32_70654_c1 3300050510 Bacteria 3377
135 nmdc:mga0n895_73940_c1 3300050512 Bacteria 3385
136 nmdc:mga0rr50_10794_c1 3300050513 Bacteria 5822
137 nmdc:mga0rr50_45997_c1 3300050513 Bacteria 3212
138 nmdc:mga0rr50_9741_c1 3300050513 Bacteria 6062
139 nmdc:mga08x19_3055_c1 3300050514 Bacteria 10059
140 nmdc:mga08x19_5832_c1 3300050514 Bacteria 7287
141 nmdc:mga0a205_6635_c1 3300050515 Bacteria 10478
142 nmdc:mga0a205_89031_c1 3300050515 Bacteria 2984
143 Ga0495595_0002738 3300053084 Bacteria 6916
144 Ga0495619_0008435 3300053085 Bacteria 6514
145 Ga0501084_0133792 3300054114 Bacteria 2087
146 Ga0530510_0003391 3300061734 Bacteria 10960
147 Ga0530510_0139476 3300061734 Bacteria 1786
148 Ga0070690_100001945
149 JGI25406J46586_10001048
150 Ga0070683_100010264
151 Ga0068869_100079822
152 Ga0070669_100038990
153 Ga0070671_100000780
154 Ga0070714_100026567
155 Ga0070713_100116775
156 Ga0070710_10027761
157 Ga0070708_100016410
158 Ga0070708_100052805
159 Ga0070706_100010383
160 Ga0070706_100043838
161 Ga0070706_100073921
162 Ga0070699_100015656
163 Ga0070699_100131858
164 Ga0070684_100033781
165 Ga0070697_100000118
166 Ga0070697_100148491
167 Ga0070695_100006759
168 Ga0070664_100017565
169 Ga0068870_10074192
170 Ga0081455_10057024
171 Ga0081538_10006034
172 Ga0081538_10006372
173 Ga0081540_1014822
174 Ga0081539_10000165
175 Ga0070717_10018919
176 Ga0070712_100008433
177 Ga0075428_100081936
178 Ga0075428_100144182
179 Ga0075430_100003953
180 Ga0075430_100029343
181 Ga0075431_100002392
182 Ga0075431_100052495
183 Ga0075433_10002253
184 Ga0075433_10006542
185 Ga0075434_100027118
186 Ga0075434_100184223
187 Ga0114129_10027729
188 Ga0114129_10040316
189 Ga0114129_10285453
190 Ga0105249_10013978
191 Ga0105249_10024931
192 Ga0157369_10014155
193 Ga0157378_10213939
194 Ga0163163_10021118
195 Ga0157380_10004728
196 Ga0157380_10014485
197 Ga0213876_10010424
198 Ga0213876_10010538
199 Ga0213876_10073034
200 Ga0224712_10004829
201 Ga0207693_10015811
202 Ga0207663_10038610
203 Ga0207660_10125180
204 Ga0207646_10108362
205 Ga0207700_10109018
206 Ga0207664_10100759
207 Ga0207689_10080339
208 Ga0207712_10039951
209 Ga0207678_10044180
210 Ga0207702_10056740
211 Ga0207674_10001881
212 Ga0307408_100059891
213 Ga0307405_10022164
214 Ga0307413_10018403
215 Ga0307410_10027587
216 Ga0307409_100047510
217 Ga0307416_100010643
218 Ga0307416_100061219
219 Ga0307416_100066087
220 Ga0307411_10020479
221 Ga0373961_0001291
222 Ga0373935_0000981
223 Ga0373937_0002198
224 Ga0436364_0266465
225 Ga0436364_0516308
226 Ga0436364_1358833
227 Ga0395901_0048973
228 Ga0436365_0032912
229 Ga0436365_0908272
230 Ga0436365_1262337
231 Ga0436363_0642699
232 Ga0436363_0705575
233 Ga0436363_1103592
234 Ga0436363_1362132
235 Ga0436363_1663746
236 Ga0436362_0295297
237 Ga0439451_004995
238 Ga0439454_002392
239 Ga0439464_0005016
240 Ga0439440_0003696
241 Ga0466970_0073746
242 Ga0466967_0005705
243 Ga0495651_0005043
244 Ga0495608_0001629
245 Ga0495663_0000321
246 Ga0495598_0000127
247 Ga0495621_0000325
248 Ga0495645_0105289
249 Ga0495667_0001407
250 Ga0495625_0102861
251 Ga0495657_0004624
252 Ga0495599_0083569
253 Ga0495600_0025745
254 Ga0495604_0002105
255 Ga0495674_0112133
256 Ga0495680_0003311
257 Ga0495602_0006882
258 Ga0496104_0016813
259 Ga0496105_0007583
260 Ga0496110_0189236
261 Ga0496110_0205909
262 Ga0496112_0038709
263 Ga0496114_0000017
264 Ga0501040_0136804
265 Ga0501041_0049041
266 Ga0501042_0092628
267 Ga0501047_0057873
268 Ga0501071_0113566
269 Ga0501075_0004038
270 Ga0501076_0085256
271 Ga0501076_0142859
272 Ga0501077_0011715
273 Ga0501079_0013536
274 Ga0501079_0099727
275 Ga0501083_0044034
276 Ga0501045_0031183
277 Ga0501045_0083069
278 nmdc:mga05p37_1096_c1
279 nmdc:mga05p37_31843_c1
280 nmdc:mga06r32_30290_c1
281 nmdc:mga06r32_70654_c1
282 nmdc:mga0n895_73940_c1
283 nmdc:mga0rr50_10794_c1
284 nmdc:mga0rr50_45997_c1
285 nmdc:mga0rr50_9741_c1
286 nmdc:mga08x19_3055_c1
287 nmdc:mga08x19_5832_c1
288 nmdc:mga0a205_6635_c1
289 nmdc:mga0a205_89031_c1
290 Ga0495595_0002738
291 Ga0495619_0008435
292 Ga0501084_0133792
293 Ga0530510_0003391
294 Ga0530510_0139476

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

471

544

0.96

PF00501

AMP-binding

AMP-binding enzyme

59

420

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.9624 1 517
3ni2-assembly1.cif.gz_A crystal structures and enzymatic mechanisms of a populus tomentosa 4-coumarate:coa ligase 0.9491 1 516
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.948 1 517
3tsy-assembly1.cif.gz_A-2 4-coumaroyl-coa ligase::stilbene synthase fusion protein 0.9453 2 420
5u95-assembly1.cif.gz_A structure of the open conformation of 4-coumarate-coa ligase from nicotiana tabacum 0.9445 1 419
ID Description Score Start End Superfamily
af_Q9VXZ8_496_596_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9926 420 516 3.30.300.30
5u95D03 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.9841 343 417 2.30.38.10
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9804 421 516 3.30.300.30
af_Q9VCC6_436_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9764 419 523 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9733 421 514 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9788 417 523 GO:0016405
AF-J1ZYK7-F1-model_v4 4-coumarate:CoA ligase 0.9785 429 520 GO:0016405
AF-A0A2K3LEK0-F1-model_v4 4-coumarate-CoA ligase 7-like protein 0.9717 429 523 GO:0016405
AF-I6Q2V6-F1-model_v4 4-coumarate--CoA ligase (EC 6.2.1.12) 0.9649 33 413 GO:0016405
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.9635 419 517 GO:0006631
GO:0031956

Map