F199286

General Info

Members Datasets Scaffolds Average Seq Length
147 75 294 129

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10009487|Ga0070658_100094873
Length 132
Sequence MASAQKQAQQLARQLFRLSVVNGELSAERVGGVLQYIEKHSPRHQHAVLNAYHRLVAAEVARGQALVEHAGPVNAQTVSDIAAKMSTRYGRKITAVTKRNDALLAGVRVRIGDDVYESSVADRLQSLATATS

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
5 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
10 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
16 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
17 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
18 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
19 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
29 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
30 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
31 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
32 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
33 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
34 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
38 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
39 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
40 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
41 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
42 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
43 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
44 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
45 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
49 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
50 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
51 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
52 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
57 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
58 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
65 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
66 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.92
Metatranscriptomes 3.4
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.64
Stem 0
Stem Tuber 0
Unclassified 6.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10009487 3300005327 Bacteria 7821
2 rootH1_10061497 3300003323 Bacteria 2623
3 Ga0068869_100021926 3300005334 Bacteria 4396
4 Ga0070678_100893192 3300005456 Unclassified 812
5 Ga0068867_100005201 3300005459 Bacteria 9182
6 Ga0070679_100010360 3300005530 Bacteria 8842
7 Ga0070684_101174127 3300005535 Unclassified 722
8 Ga0068853_100953378 3300005539 Bacteria 825
9 Ga0070693_101228229 3300005547 Bacteria 577
10 Ga0068866_10038279 3300005718 Bacteria 2360
11 Ga0070717_10000231 3300006028 Bacteria 38509
12 Ga0097621_100517748 3300006237 Bacteria 1082
13 Ga0068871_100055490 3300006358 Bacteria 3216
14 Ga0068871_100244517 3300006358 Bacteria 1561
15 Ga0068865_100003383 3300006881 Bacteria 9550
16 Ga0068865_100465824 3300006881 Bacteria 1048
17 Ga0068865_100515283 3300006881 Bacteria 999
18 Ga0105245_11199884 3300009098 Bacteria 807
19 Ga0157374_10593645 3300013296 Bacteria 1117
20 Ga0157374_11548009 3300013296 Bacteria 687
21 Ga0157375_10356901 3300013308 Bacteria 1628
22 Ga0157377_10997934 3300014745 Bacteria 634
23 Ga0207642_10075652 3300025899 Bacteria 1618
24 Ga0207652_10006022 3300025921 Bacteria 9818
25 Ga0207687_11153611 3300025927 Bacteria 666
26 Ga0207704_10004112 3300025938 Bacteria 6628
27 Ga0207704_10603397 3300025938 Bacteria 899
28 Ga0207689_10000690 3300025942 Bacteria 32310
29 Ga0207677_10108721 3300026023 Bacteria 2060
30 Ga0207639_10908577 3300026041 Unclassified 823
31 Ga0207648_10088489 3300026089 Bacteria 2704
32 Ga0207683_10536261 3300026121 Bacteria 1082
33 Ga0265337_1001734 3300028556 Bacteria 10544
34 Ga0265337_1005483 3300028556 Bacteria 5033
35 Ga0265337_1050134 3300028556 Bacteria 1177
36 Ga0265337_1110429 3300028556 Bacteria 747
37 Ga0265326_10035872 3300028558 Bacteria 1410
38 Ga0265326_10053157 3300028558 Bacteria 1146
39 Ga0265319_1000484 3300028563 Bacteria 27992
40 Ga0265319_1002958 3300028563 Bacteria 9049
41 Ga0265319_1003272 3300028563 Bacteria 8523
42 Ga0265319_1006974 3300028563 Bacteria 5148
43 Ga0265319_1008211 3300028563 Bacteria 4600
44 Ga0265319_1008262 3300028563 Bacteria 4582
45 Ga0265319_1011813 3300028563 Bacteria 3556
46 Ga0265319_1039352 3300028563 Bacteria 1603
47 Ga0265319_1046410 3300028563 Unclassified 1448
48 Ga0265334_10047532 3300028573 Bacteria 1655
49 Ga0265334_10088159 3300028573 Unclassified 1135
50 Ga0265318_10001286 3300028577 Bacteria 15107
51 Ga0265318_10002002 3300028577 Bacteria 11299
52 Ga0265318_10003339 3300028577 Bacteria 8116
53 Ga0265318_10004718 3300028577 Bacteria 6535
54 Ga0265318_10033303 3300028577 Bacteria 1990
55 Ga0265318_10039039 3300028577 Bacteria 1813
56 Ga0265323_10001861 3300028653 Bacteria 9980
57 Ga0265323_10009135 3300028653 Bacteria 4066
58 Ga0265323_10036927 3300028653 Bacteria 1794
59 Ga0265323_10057831 3300028653 Unclassified 1355
60 Ga0265322_10005105 3300028654 Bacteria 3883
61 Ga0265322_10081276 3300028654 Bacteria 920
62 Ga0265322_10169516 3300028654 Unclassified 625
63 Ga0265338_10000098 3300028800 Bacteria 159918
64 Ga0265338_10092944 3300028800 Bacteria 2487
65 Ga0265338_10241746 3300028800 Bacteria 1336
66 Ga0265338_10335657 3300028800 Bacteria 1090
67 Ga0265324_10016736 3300029957 Bacteria 2671
68 Ga0265324_10017249 3300029957 Bacteria 2628
69 Ga0265330_10008163 3300031235 Bacteria 5054
70 Ga0265330_10115733 3300031235 Bacteria 1143
71 Ga0265332_10020778 3300031238 Bacteria 2900
72 Ga0265332_10053369 3300031238 Bacteria 1735
73 Ga0265332_10236996 3300031238 Bacteria 756
74 Ga0265328_10018746 3300031239 Bacteria 2665
75 Ga0265328_10111084 3300031239 Bacteria 1019
76 Ga0265320_10000295 3300031240 Bacteria 40537
77 Ga0265320_10000459 3300031240 Bacteria 32009
78 Ga0265320_10006165 3300031240 Bacteria 7589
79 Ga0265320_10027946 3300031240 Bacteria 2934
80 Ga0265320_10033213 3300031240 Bacteria 2635
81 Ga0265320_10041815 3300031240 Bacteria 2277
82 Ga0265320_10045246 3300031240 Bacteria 2163
83 Ga0265320_10047185 3300031240 Bacteria 2107
84 Ga0265320_10053441 3300031240 Bacteria 1953
85 Ga0265325_10001728 3300031241 Bacteria 15164
86 Ga0265329_10012325 3300031242 Bacteria 3075
87 Ga0265340_10045771 3300031247 Bacteria 2135
88 Ga0265340_10201877 3300031247 Bacteria 894
89 Ga0265339_10043755 3300031249 Bacteria 2473
90 Ga0265339_10133952 3300031249 Bacteria 1265
91 Ga0265339_10222299 3300031249 Unclassified 923
92 Ga0265331_10026978 3300031250 Bacteria 2883
93 Ga0265331_10068464 3300031250 Bacteria 1664
94 Ga0265327_10044182 3300031251 Bacteria 2378
95 Ga0265316_10066699 3300031344 Bacteria 2784
96 Ga0265316_10069067 3300031344 Bacteria 2727
97 Ga0265316_10084042 3300031344 Bacteria 2438
98 Ga0265316_10117268 3300031344 Bacteria 2013
99 Ga0265316_10166195 3300031344 Bacteria 1648
100 Ga0265316_10684600 3300031344 Bacteria 724
101 Ga0265313_10000456 3300031595 Bacteria 43250
102 Ga0265313_10000581 3300031595 Bacteria 38060
103 Ga0265313_10009404 3300031595 Bacteria 6348
104 Ga0265314_10072063 3300031711 Bacteria 2309
105 Ga0265314_10089427 3300031711 Bacteria 2009
106 Ga0265314_10098640 3300031711 Bacteria 1884
107 Ga0265314_10128461 3300031711 Bacteria 1584
108 Ga0265342_10012577 3300031712 Bacteria 5727
109 Ga0265342_10025832 3300031712 Unclassified 3687
110 Ga0265342_10033885 3300031712 Bacteria 3136
111 Ga0265342_10037202 3300031712 Bacteria 2969
112 Ga0265342_10039015 3300031712 Bacteria 2888
113 Ga0265342_10067041 3300031712 Bacteria 2101
114 Ga0265342_10138796 3300031712 Unclassified 1357
115 Ga0265342_10200947 3300031712 Bacteria 1083
116 Ga0307405_10054613 3300031731 Bacteria 2495
117 Ga0307413_10126621 3300031824 Bacteria 1741
118 Ga0307412_10007575 3300031911 Bacteria 6165
119 Ga0307409_100001057 3300031995 Bacteria 12917
120 Ga0307416_100003911 3300032002 Bacteria 8869
121 Ga0373951_0037500 3300035091 Bacteria 1159
122 Ga0373931_0187932 3300035691 Bacteria 1227
123 Ga0439444_0090267 3300042437 Bacteria 682
124 Ga0451577_0000017 3300042876 Bacteria 523453
125 Ga0451577_0156702 3300042876 Bacteria 2050
126 Ga0451577_0512248 3300042876 Bacteria 1089
127 Ga0451577_1855654 3300042876 Bacteria 528
128 Ga0466969_0074122 3300044656 Bacteria 1633
129 Ga0453684_0019972 3300044712 Bacteria 10155
130 Ga0466959_0179387 3300045049 Bacteria 1482
131 Ga0451576_0000379 3300045051 Bacteria 104282
132 Ga0451576_0018656 3300045051 Bacteria 7591
133 Ga0451576_1520195 3300045051 Bacteria 695
134 Ga0495630_0323734 3300046517 Bacteria 1179
135 Ga0495645_0603048 3300046543 Bacteria 675
136 Ga0501308_006424 3300049128 Bacteria 1204
137 Ga0501310_013457 3300049130 Bacteria 949
138 Ga0501305_000079 3300049161 Bacteria 5640
139 Ga0501305_027996 3300049161 Bacteria 866
140 Ga0501312_000077 3300049528 Bacteria 5689
141 Ga0501033_0334764 3300049570 Bacteria 1062
142 Ga0501046_0002269 3300049580 Bacteria 18142
143 Ga0501047_0030410 3300049581 Bacteria 5207
144 Ga0501047_0303843 3300049581 Bacteria 1437
145 Ga0501083_0085508 3300049744 Bacteria 2086
146 Ga0501035_0064292 3300049822 Bacteria 3261
147 2788436261 2786546940 Bacteria 6396474
148 Ga0070658_10009487
149 rootH1_10061497
150 Ga0068869_100021926
151 Ga0070678_100893192
152 Ga0068867_100005201
153 Ga0070679_100010360
154 Ga0070684_101174127
155 Ga0068853_100953378
156 Ga0070693_101228229
157 Ga0068866_10038279
158 Ga0070717_10000231
159 Ga0097621_100517748
160 Ga0068871_100055490
161 Ga0068871_100244517
162 Ga0068865_100003383
163 Ga0068865_100465824
164 Ga0068865_100515283
165 Ga0105245_11199884
166 Ga0157374_10593645
167 Ga0157374_11548009
168 Ga0157375_10356901
169 Ga0157377_10997934
170 Ga0207642_10075652
171 Ga0207652_10006022
172 Ga0207687_11153611
173 Ga0207704_10004112
174 Ga0207704_10603397
175 Ga0207689_10000690
176 Ga0207677_10108721
177 Ga0207639_10908577
178 Ga0207648_10088489
179 Ga0207683_10536261
180 Ga0265337_1001734
181 Ga0265337_1005483
182 Ga0265337_1050134
183 Ga0265337_1110429
184 Ga0265326_10035872
185 Ga0265326_10053157
186 Ga0265319_1000484
187 Ga0265319_1002958
188 Ga0265319_1003272
189 Ga0265319_1006974
190 Ga0265319_1008211
191 Ga0265319_1008262
192 Ga0265319_1011813
193 Ga0265319_1039352
194 Ga0265319_1046410
195 Ga0265334_10047532
196 Ga0265334_10088159
197 Ga0265318_10001286
198 Ga0265318_10002002
199 Ga0265318_10003339
200 Ga0265318_10004718
201 Ga0265318_10033303
202 Ga0265318_10039039
203 Ga0265323_10001861
204 Ga0265323_10009135
205 Ga0265323_10036927
206 Ga0265323_10057831
207 Ga0265322_10005105
208 Ga0265322_10081276
209 Ga0265322_10169516
210 Ga0265338_10000098
211 Ga0265338_10092944
212 Ga0265338_10241746
213 Ga0265338_10335657
214 Ga0265324_10016736
215 Ga0265324_10017249
216 Ga0265330_10008163
217 Ga0265330_10115733
218 Ga0265332_10020778
219 Ga0265332_10053369
220 Ga0265332_10236996
221 Ga0265328_10018746
222 Ga0265328_10111084
223 Ga0265320_10000295
224 Ga0265320_10000459
225 Ga0265320_10006165
226 Ga0265320_10027946
227 Ga0265320_10033213
228 Ga0265320_10041815
229 Ga0265320_10045246
230 Ga0265320_10047185
231 Ga0265320_10053441
232 Ga0265325_10001728
233 Ga0265329_10012325
234 Ga0265340_10045771
235 Ga0265340_10201877
236 Ga0265339_10043755
237 Ga0265339_10133952
238 Ga0265339_10222299
239 Ga0265331_10026978
240 Ga0265331_10068464
241 Ga0265327_10044182
242 Ga0265316_10066699
243 Ga0265316_10069067
244 Ga0265316_10084042
245 Ga0265316_10117268
246 Ga0265316_10166195
247 Ga0265316_10684600
248 Ga0265313_10000456
249 Ga0265313_10000581
250 Ga0265313_10009404
251 Ga0265314_10072063
252 Ga0265314_10089427
253 Ga0265314_10098640
254 Ga0265314_10128461
255 Ga0265342_10012577
256 Ga0265342_10025832
257 Ga0265342_10033885
258 Ga0265342_10037202
259 Ga0265342_10039015
260 Ga0265342_10067041
261 Ga0265342_10138796
262 Ga0265342_10200947
263 Ga0307405_10054613
264 Ga0307413_10126621
265 Ga0307412_10007575
266 Ga0307409_100001057
267 Ga0307416_100003911
268 Ga0373951_0037500
269 Ga0373931_0187932
270 Ga0439444_0090267
271 Ga0451577_0000017
272 Ga0451577_0156702
273 Ga0451577_0512248
274 Ga0451577_1855654
275 Ga0466969_0074122
276 Ga0453684_0019972
277 Ga0466959_0179387
278 Ga0451576_0000379
279 Ga0451576_0018656
280 Ga0451576_1520195
281 Ga0495630_0323734
282 Ga0495645_0603048
283 Ga0501308_006424
284 Ga0501310_013457
285 Ga0501305_000079
286 Ga0501305_027996
287 Ga0501312_000077
288 Ga0501033_0334764
289 Ga0501046_0002269
290 Ga0501047_0030410
291 Ga0501047_0303843
292 Ga0501083_0085508
293 Ga0501035_0064292
294 2788436261

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00213

OSCP

ATP synthase delta (OSCP) subunit

2

130

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zu5-assembly1.cif.gz_SH0 structure of the paranosema locustae ribosome in complex with lso2 0.7102 64 95
2xcz-assembly1.cif.gz_A crystal structure of macrophage migration inhibitory factor homologue from prochlorococcus marinus 0.6615 64 104
2wkb-assembly2.cif.gz_C crystal structure of macrophage migration inhibitory factor from plasmodium berghei 0.6449 64 103
3hde-assembly2.cif.gz_C crystal structure of full-length endolysin r21 from phage 21 0.6322 6 38
6rdf-assembly1.cif.gz_P cryoem structure of polytomella f-atp synthase, primary rotary state 3, monomer-masked refinement 0.6312 62 127
ID Description Score Start End Superfamily
af_Q57590_2_97_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.8541 66 98 3.30.460.10
af_P0ABA4_107_177_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.7659 64 130 3.30.2320.30
af_Q84R40_123_196_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.7435 64 127 3.30.2320.30
af_Q2FWE7_104_179_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.7315 63 130 3.30.2320.30
af_P0ABA4_107_177_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.7167 64 130 3.30.2320.30
ID Description Score Start End GO Terms
AF-A0A139SQ28-F1-model_v4 ATP synthase F0F1 subunit delta 0.8907 6 131 GO:0016020
GO:0046933
AF-A0A1J5S8W3-F1-model_v4 ATP synthase subunit delta 0.8806 1 131 GO:0016020
GO:0046933
AF-A0A3D4H9B3-F1-model_v4 Uncharacterized protein 0.8805 5 130 GO:0016020
GO:0046933
AF-A0A381WYX0-F1-model_v4 Uncharacterized protein 0.8683 6 104 GO:0016020
GO:0046933
AF-A0A354EBL0-F1-model_v4 deleted 0.8573 6 112

Map