F198399

General Info

Members Datasets Scaffolds Average Seq Length
146 123 292 403

Family's Representative Sequence

Representative Sequence 3300046455|Ga0495603_0043931|Ga0495603_0043931_847_2175
Length 442
Sequence VCSRRCQSDSTSGWTRRTPATADQRSVRHDHAPSPENLQKAEAKAIDLNALRAHFPSLDHGLAFFDGPGGTQTPRPVAHAIVDTLTGPLSNRGVVSRSELNAERAVTDFRDAYADLLNVPAEGVVHGRSATQLTYDFSRHLAKGWNAGDEIVLSRLDHDSNVRPWVQAAERAGVTVRWIEIDGGSTELDLDSFERALSPRTRLVAVTAASNVLGTKPPLRHIADRAHEFGALVYVDGVHYAAHHLVDVPALGADLFVCSPYKFLGPHCGVLAAAPELLETIYPDKLAPSPDTVPERFEFGTLPYEILAGATAAVVFLAAIDPGTGGTRREWLAHSLGSLHEHERALRTRLEEGLRALGDAVTLHSKAADRTPTLLMTIEGRDAREAQVHLAARDVLAPAGSFYAYETFTALKLEHPALRVGLAPYNSAEDVDRFLDGLASFL

Samples

Sample ID Description Type Environment
1 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
5 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
8 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
9 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
10 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
11 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
12 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
13 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
14 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
18 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
19 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
20 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
21 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
22 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
23 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
24 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
25 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
26 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
27 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
28 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
29 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
30 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
31 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
32 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
33 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
34 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
35 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
36 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
37 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
38 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
39 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
40 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
41 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
42 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
43 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
44 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
45 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
46 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
47 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
48 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
49 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
50 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
51 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
52 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
53 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
54 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
55 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
56 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
57 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
58 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
59 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
60 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
61 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
62 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
63 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
64 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
65 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
66 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
67 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
68 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
69 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
70 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
71 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
72 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
78 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
79 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
80 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
81 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
82 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
83 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
84 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
85 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
86 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
87 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
88 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
89 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
90 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
91 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
92 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
93 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
94 2643221549 Agromyces sp. Root1464 Isolate Unclassified
95 2643221572 Leifsonia sp. Root60 Isolate Unclassified
96 2643221619 Agromyces sp. Root81 Isolate Unclassified
97 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
98 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
99 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
100 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
101 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
102 2808606372 Agromyces sp. 23-23 Isolate Unclassified
103 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
104 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
105 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
106 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
107 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
108 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
109 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
110 2862574272 Streptomyces sp. AcE210 Isolate Nodule
111 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
112 2902582711 Micromonospora sp. AP08 Isolate Unclassified
113 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
114 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
115 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
116 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
117 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
118 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
119 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
120 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
121 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
122 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
123 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.4
Metatranscriptomes 0
Isolates 22.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.27
Nodule 2.05
Rhizoplane 0
Rhizosphere 65.07
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495603_0043931 3300046455 Bacteria 2667
2 Ga0055540_1003449 3300003792 Bacteria 7637
3 Ga0055540_1004113 3300003792 Bacteria 6730
4 Ga0070683_100022292 3300005329 Bacteria 5659
5 Ga0068862_100048872 3300005844 Bacteria 3612
6 Ga0075368_10003983 3300006042 Bacteria 4975
7 Ga0075367_10001579 3300006178 Bacteria 9870
8 Ga0075430_100112414 3300006846 Bacteria 2270
9 Ga0111539_10246733 3300009094 Bacteria 2079
10 Ga0105243_10063095 3300009148 Bacteria 2969
11 Ga0105243_10196776 3300009148 Bacteria 1765
12 Ga0157380_10003307 3300014326 Bacteria 11056
13 Ga0182008_10001657 3300014497 Bacteria 14682
14 Ga0182007_10003431 3300015262 Bacteria 7469
15 Ga0209051_1000765 3300025303 Bacteria 34214
16 Ga0209051_1002142 3300025303 Bacteria 14689
17 Ga0207688_10022167 3300025901 Bacteria 3474
18 Ga0207659_10195168 3300025926 Bacteria 1613
19 Ga0268265_10035724 3300028380 Bacteria 3634
20 Ga0307517_10001654 3300028786 Bacteria 36822
21 Ga0307517_10006734 3300028786 Bacteria 16910
22 Ga0307515_10000025 3300028794 Bacteria 390205
23 Ga0307511_10051691 3300030521 Bacteria 3290
24 Ga0307509_10024634 3300031507 Bacteria 6735
25 Ga0307509_10115655 3300031507 Bacteria 2674
26 Ga0307508_10113960 3300031616 Bacteria 2304
27 Ga0307514_10081095 3300031649 Bacteria 2398
28 Ga0307516_10008794 3300031730 Bacteria 11347
29 Ga0307518_10000363 3300031838 Bacteria 34524
30 Ga0307409_100096601 3300031995 Bacteria 2438
31 Ga0307510_10006299 3300033180 Bacteria 14155
32 Ga0307510_10041739 3300033180 Bacteria 5010
33 Ga0373951_0000201 3300035091 Bacteria 21706
34 Ga0373942_0000314 3300035207 Bacteria 13135
35 Ga0395899_0112843 3300037312 Bacteria 1953
36 Ga0395900_0137936 3300037418 Bacteria 2499
37 Ga0395905_0269456 3300037471 Bacteria 1589
38 Ga0451853_0968302 3300041512 Bacteria 5773
39 Ga0451853_2194026 3300041512 Bacteria 3130
40 Ga0466957_0070200 3300044842 Bacteria 2165
41 Ga0466960_0058409 3300044901 Bacteria 1884
42 Ga0495592_0038621 3300046454 Bacteria 3591
43 Ga0495603_0003272 3300046455 Bacteria 9645
44 Ga0495603_0073439 3300046455 Bacteria 2009
45 Ga0495629_0123880 3300046459 Bacteria 1800
46 Ga0495638_0013593 3300046460 Bacteria 5534
47 Ga0495638_0056518 3300046460 Bacteria 2435
48 Ga0495605_0026733 3300046474 Bacteria 2997
49 Ga0495662_0020207 3300046476 Bacteria 3221
50 Ga0495664_0085337 3300046477 Bacteria 1896
51 Ga0495594_0025816 3300046499 Bacteria 3159
52 Ga0495594_0085906 3300046499 Bacteria 1760
53 Ga0495620_0007058 3300046515 Bacteria 6127
54 Ga0495620_0057890 3300046515 Bacteria 1624
55 Ga0495628_0005668 3300046516 Bacteria 10935
56 Ga0495628_0022790 3300046516 Bacteria 5143
57 Ga0495631_0004809 3300046518 Bacteria 7117
58 Ga0495632_0053866 3300046519 Bacteria 1974
59 Ga0495643_0011041 3300046522 Bacteria 5522
60 Ga0495648_0032612 3300046524 Bacteria 3415
61 Ga0495652_0001213 3300046529 Bacteria 28883
62 Ga0495640_0039636 3300046533 Bacteria 3303
63 Ga0495609_0035276 3300046538 Bacteria 2264
64 Ga0495597_0015310 3300046542 Bacteria 3632
65 Ga0495645_0057758 3300046543 Bacteria 2815
66 Ga0495611_0019029 3300046648 Bacteria 2948
67 Ga0495625_0062555 3300046660 Bacteria 2630
68 Ga0495635_0005063 3300046663 Bacteria 9167
69 Ga0495635_0044306 3300046663 Bacteria 3070
70 Ga0495670_0129285 3300046691 Bacteria 1316
71 Ga0495649_0014810 3300046694 Bacteria 4456
72 Ga0495589_0002054 3300046794 Bacteria 11393
73 Ga0495600_0032531 3300046809 Bacteria 3385
74 Ga0495660_0097996 3300046810 Bacteria 1513
75 Ga0495604_0088896 3300047317 Bacteria 2297
76 Ga0495636_0038571 3300047318 Bacteria 1977
77 Ga0495672_0070680 3300047320 Bacteria 1977
78 Ga0495676_0028225 3300047321 Bacteria 4796
79 Ga0495676_0043964 3300047321 Bacteria 3650
80 Ga0495676_0045933 3300047321 Bacteria 3550
81 Ga0495680_0012311 3300047322 Bacteria 7537
82 Ga0495687_014799 3300047443 Bacteria 3993
83 Ga0495675_0027838 3300047444 Bacteria 3603
84 Ga0495685_005864 3300047447 Bacteria 4012
85 Ga0495685_006092 3300047447 Bacteria 3945
86 Ga0495614_0004669 3300048089 Bacteria 6171
87 Ga0495626_0071033 3300048091 Bacteria 1565
88 Ga0496125_0170757 3300048928 Bacteria 1462
89 Ga0501033_0007299 3300049570 Bacteria 8622
90 Ga0501034_0091687 3300049571 Bacteria 3036
91 Ga0501034_0118636 3300049571 Bacteria 2633
92 Ga0501034_0152594 3300049571 Bacteria 2285
93 Ga0501034_0154079 3300049571 Bacteria 2273
94 Ga0501037_0048512 3300049573 Bacteria 3111
95 Ga0501037_0051149 3300049573 Bacteria 3022
96 Ga0501043_0014970 3300049579 Bacteria 6076
97 Ga0501047_0004541 3300049581 Bacteria 13047
98 Ga0501069_0069475 3300049585 Bacteria 1972
99 Ga0501073_0011473 3300049589 Bacteria 6482
100 Ga0501080_0000179 3300049742 Bacteria 46276
101 nmdc:mga06z11_1065_c1 3300050494 Bacteria 9984
102 nmdc:mga04h51_7560_c1 3300050495 Bacteria 2873
103 nmdc:mga0qj67_14484_c1 3300050509 Bacteria 5962
104 Ga0495601_0004390 3300053077 Bacteria 8150
105 Ga0495601_0016853 3300053077 Bacteria 4431
106 Ga0495612_0046871 3300053078 Bacteria 1770
107 Ga0500553_050710 3300053101 Bacteria 1991
108 Ga0500560_007886 3300053107 Bacteria 2534
109 Ga0500560_027631 3300053107 Bacteria 1686
110 Ga0500652_014578 3300053131 Bacteria 2815
111 Ga0500568_0000949 3300053139 Bacteria 19941
112 Ga0500627_0000901 3300053158 Bacteria 7971
113 Ga0500645_006592 3300053730 Bacteria 4123
114 2585313911 2582581314 Bacteria 11452267
115 2586059342 2585427649 Bacteria 9053857
116 2616697923 2616644814 Bacteria 11555299
117 2643766960 2643221549 Bacteria 4042819
118 2643877279 2643221572 Bacteria 3614809
119 2644113118 2643221619 Bacteria 4158469
120 2644384334 2643221669 Bacteria 3611286
121 2644442673 2643221678 Bacteria 9540101
122 2644490177 2643221687 Bacteria 6500351
123 2723640205 2721755702 Bacteria 4373124
124 2808844857 2808606359 Bacteria 9866990
125 2808899705 2808606372 Bacteria 4649509
126 2809591900 2808606522 Bacteria 9488490
127 2810364376 2808606700 Bacteria 3482157
128 2857733211 2857729791 Bacteria 4040535
129 2857739356 2857737099 Bacteria 3104305
130 2862292864 2862290372 Bacteria 7471434
131 2862386995 2862382967 Bacteria 10317375
132 2862515713 2862507626 Bacteria 9425308
133 2862574342 2862574272 Bacteria 10567477
134 2863409439 2863404153 Bacteria 9672205
135 2902582794 2902582711 Bacteria 6187705
136 2902839011 2902837492 Bacteria 6697721
137 2912764956 2912757875 Bacteria 7940295
138 2915773387 2915768154 Bacteria 8424322
139 2919472661 2919468124 Bacteria 9133025
140 2928121913 2928121344 Bacteria 3972376
141 2935412649 2935409751 Bacteria 4179611
142 2946004642 2946003308 Bacteria 3857229
143 2946078496 2946072368 Bacteria 8999607
144 2990090050 2990088156 Bacteria 6657676
145 8008565107 8008558824 Bacteria 10610750
146 8056832638 8056829672 Bacteria 9045328
147 Ga0495603_0043931
148 Ga0055540_1003449
149 Ga0055540_1004113
150 Ga0070683_100022292
151 Ga0068862_100048872
152 Ga0075368_10003983
153 Ga0075367_10001579
154 Ga0075430_100112414
155 Ga0111539_10246733
156 Ga0105243_10063095
157 Ga0105243_10196776
158 Ga0157380_10003307
159 Ga0182008_10001657
160 Ga0182007_10003431
161 Ga0209051_1000765
162 Ga0209051_1002142
163 Ga0207688_10022167
164 Ga0207659_10195168
165 Ga0268265_10035724
166 Ga0307517_10001654
167 Ga0307517_10006734
168 Ga0307515_10000025
169 Ga0307511_10051691
170 Ga0307509_10024634
171 Ga0307509_10115655
172 Ga0307508_10113960
173 Ga0307514_10081095
174 Ga0307516_10008794
175 Ga0307518_10000363
176 Ga0307409_100096601
177 Ga0307510_10006299
178 Ga0307510_10041739
179 Ga0373951_0000201
180 Ga0373942_0000314
181 Ga0395899_0112843
182 Ga0395900_0137936
183 Ga0395905_0269456
184 Ga0451853_0968302
185 Ga0451853_2194026
186 Ga0466957_0070200
187 Ga0466960_0058409
188 Ga0495592_0038621
189 Ga0495603_0003272
190 Ga0495603_0073439
191 Ga0495629_0123880
192 Ga0495638_0013593
193 Ga0495638_0056518
194 Ga0495605_0026733
195 Ga0495662_0020207
196 Ga0495664_0085337
197 Ga0495594_0025816
198 Ga0495594_0085906
199 Ga0495620_0007058
200 Ga0495620_0057890
201 Ga0495628_0005668
202 Ga0495628_0022790
203 Ga0495631_0004809
204 Ga0495632_0053866
205 Ga0495643_0011041
206 Ga0495648_0032612
207 Ga0495652_0001213
208 Ga0495640_0039636
209 Ga0495609_0035276
210 Ga0495597_0015310
211 Ga0495645_0057758
212 Ga0495611_0019029
213 Ga0495625_0062555
214 Ga0495635_0005063
215 Ga0495635_0044306
216 Ga0495670_0129285
217 Ga0495649_0014810
218 Ga0495589_0002054
219 Ga0495600_0032531
220 Ga0495660_0097996
221 Ga0495604_0088896
222 Ga0495636_0038571
223 Ga0495672_0070680
224 Ga0495676_0028225
225 Ga0495676_0043964
226 Ga0495676_0045933
227 Ga0495680_0012311
228 Ga0495687_014799
229 Ga0495675_0027838
230 Ga0495685_005864
231 Ga0495685_006092
232 Ga0495614_0004669
233 Ga0495626_0071033
234 Ga0496125_0170757
235 Ga0501033_0007299
236 Ga0501034_0091687
237 Ga0501034_0118636
238 Ga0501034_0152594
239 Ga0501034_0154079
240 Ga0501037_0048512
241 Ga0501037_0051149
242 Ga0501043_0014970
243 Ga0501047_0004541
244 Ga0501069_0069475
245 Ga0501073_0011473
246 Ga0501080_0000179
247 nmdc:mga06z11_1065_c1
248 nmdc:mga04h51_7560_c1
249 nmdc:mga0qj67_14484_c1
250 Ga0495601_0004390
251 Ga0495601_0016853
252 Ga0495612_0046871
253 Ga0500553_050710
254 Ga0500560_007886
255 Ga0500560_027631
256 Ga0500652_014578
257 Ga0500568_0000949
258 Ga0500627_0000901
259 Ga0500645_006592
260 2585313911
261 2586059342
262 2616697923
263 2643766960
264 2643877279
265 2644113118
266 2644384334
267 2644442673
268 2644490177
269 2723640205
270 2808844857
271 2808899705
272 2809591900
273 2810364376
274 2857733211
275 2857739356
276 2862292864
277 2862386995
278 2862515713
279 2862574342
280 2863409439
281 2902582794
282 2902839011
283 2912764956
284 2915773387
285 2919472661
286 2928121913
287 2935412649
288 2946004642
289 2946078496
290 2990090050
291 8008565107
292 8056832638

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

132

274

0.92

PF00266

Aminotran_5

Aminotransferase class-V

63

434

0.9

PF00155

Aminotran_1_2

Aminotransferase class I and II

68

244

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cai-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis rv3778c protein 0.9587 26 418
3cai-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis rv3778c protein 0.9492 26 418
6c9e-assembly1.cif.gz_A crystal structure of cysteine desulfurase from legionella pneumophila philadelphia 1 0.9233 25 420
5vpr-assembly1.cif.gz_A crystal structure of cysteine desulfurase from elizabethkingia anophelis with covalently bound pyridoxal phosphate 0.9228 26 420
4w91-assembly3.cif.gz_E crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9186 26 420
ID Description Score Start End Superfamily
af_P9WQ67_32_395_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9632 56 417 3.40.640.10
3caiA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9564 53 306 3.40.640.10
af_P9WQ67_32_395_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9555 56 417 3.40.640.10
4w91I01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9489 320 420 3.90.1150.10
3caiA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.942 53 306 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A1V5IUW2-F1-model_v4 deleted 0.9854 80 421
AF-A0A2W6V6Y6-F1-model_v4 deleted 0.9829 182 421
AF-A0A526Z835-F1-model_v4 Cysteine desulfurase-like protein 0.9732 58 421
AF-A0A6B3I0U9-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9719 268 422 GO:0008483
AF-A0A559UU55-F1-model_v4 Cysteine desulfurase family protein (TIGR01976 family) 0.9707 62 421

Map