F197025

General Info

Members Datasets Scaffolds Average Seq Length
146 109 292 363

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100022857|Ga0070665_1000228573
Length 392
Sequence MTTSDQDTHWMHRALDLARRGTGLVSPNPAVGCVILDRNGELIGEGWHEHDLLDHAEVAALKRARQDANEDHLKGATAYVTLEPCNHTGRTGPCTQALIDAGVSRVVAATADPNPNVAGRGIQTLAAAGIKTETGICQNEARRLNEGFAKWIQHKRPFVLMKVAMSLDGRIAPLADSRTNREPYWITSQESRDAVQKLRHQADAVLTGVGTVLADDPLLTDRSGLRRRRPLLRVVLDSTLRIPLDSKIVSSAQNDLIIYTICEDRSRANALRDRGARVEVLPADEGDGVLDDKSSSLGEKNRVPLPAVLDHLGSEGILGLLTETGSRLNAVLLMENLVDRVQFFVSPQVMGADAIAAFGELPSPRSFSDVEIEKVGGDFALTSLLHDPWRSS

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
72 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
86 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
87 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
88 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
104 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
105 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
108 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
109 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.95
Metatranscriptomes 0
Isolates 2.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 0
Rhizoplane 1.37
Rhizosphere 92.47
Stem 0
Stem Tuber 0
Unclassified 2.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100022857 3300005548 Bacteria 6296
2 Ga0065715_10091147 3300005293 Bacteria 6055
3 Ga0070676_10022619 3300005328 Bacteria 3527
4 Ga0070670_100168799 3300005331 Bacteria 1898
5 Ga0070670_100191936 3300005331 Bacteria 1774
6 Ga0068868_100139315 3300005338 Bacteria 1990
7 Ga0068868_100242497 3300005338 Bacteria 1515
8 Ga0070661_100014913 3300005344 Bacteria 5480
9 Ga0070668_100006141 3300005347 Bacteria 8905
10 Ga0070668_100357211 3300005347 Bacteria 1238
11 Ga0070669_100292039 3300005353 Bacteria 1309
12 Ga0070675_100269142 3300005354 Unclassified 1495
13 Ga0070673_100091168 3300005364 Bacteria 2491
14 Ga0070688_100060810 3300005365 Bacteria 2386
15 Ga0070667_100134146 3300005367 Bacteria 2164
16 Ga0070663_100078520 3300005455 Unclassified 2420
17 Ga0070685_10055321 3300005466 Bacteria 2305
18 Ga0070684_100329605 3300005535 Bacteria 1403
19 Ga0068853_100020224 3300005539 Bacteria 5534
20 Ga0068853_100053620 3300005539 Bacteria 3472
21 Ga0068855_100003334 3300005563 Bacteria 19648
22 Ga0068855_100103014 3300005563 Bacteria 3284
23 Ga0070664_100230231 3300005564 Bacteria 1661
24 Ga0068857_100028140 3300005577 Bacteria 4958
25 Ga0068856_100025757 3300005614 Bacteria 5735
26 Ga0068852_100000020 3300005616 Bacteria 126369
27 Ga0068859_100045211 3300005617 Bacteria 4424
28 Ga0068859_100160117 3300005617 Bacteria 2330
29 Ga0068863_100190154 3300005841 Bacteria 1972
30 Ga0068863_100317529 3300005841 Bacteria 1513
31 Ga0068858_100001937 3300005842 Bacteria 21103
32 Ga0068858_100092030 3300005842 Bacteria 2822
33 Ga0068860_100185109 3300005843 Bacteria 2014
34 Ga0068862_100109255 3300005844 Bacteria 2426
35 Ga0068862_100210225 3300005844 Bacteria 1758
36 Ga0081539_10001842 3300005985 Bacteria 33429
37 Ga0081539_10011312 3300005985 Bacteria 7084
38 Ga0070717_10234385 3300006028 Bacteria 1617
39 Ga0097621_100091775 3300006237 Bacteria 2542
40 Ga0075431_100011058 3300006847 Bacteria 9082
41 Ga0097620_100045212 3300006931 Bacteria 4424
42 Ga0097620_100160120 3300006931 Bacteria 2330
43 Ga0105240_10007803 3300009093 Bacteria 15461
44 Ga0105240_10022639 3300009093 Bacteria 8325
45 Ga0105240_10093738 3300009093 Bacteria 3664
46 Ga0111539_10202424 3300009094 Bacteria 2315
47 Ga0105241_10000021 3300009174 Bacteria 143251
48 Ga0105248_10035609 3300009177 Bacteria 5569
49 Ga0105238_10009510 3300009551 Bacteria 9728
50 Ga0105238_10044545 3300009551 Bacteria 4485
51 Ga0105238_10141821 3300009551 Bacteria 2379
52 Ga0105239_10000725 3300010375 Bacteria 46872
53 Ga0105239_10213979 3300010375 Bacteria 2160
54 Ga0157369_10003992 3300013105 Bacteria 17499
55 Ga0157369_10004534 3300013105 Bacteria 16345
56 Ga0157374_10001525 3300013296 Bacteria 19503
57 Ga0157374_10111406 3300013296 Bacteria 2633
58 Ga0157372_10000659 3300013307 Bacteria 37935
59 Ga0163163_10344150 3300014325 Bacteria 1547
60 Ga0157380_10006755 3300014326 Bacteria 8108
61 Ga0157379_10238897 3300014968 Bacteria 1648
62 Ga0157376_10023893 3300014969 Bacteria 4793
63 Ga0163161_10052195 3300017792 Bacteria 2963
64 Ga0207654_10000053 3300025911 Bacteria 83591
65 Ga0207695_10000035 3300025913 Bacteria 486590
66 Ga0207695_10000047 3300025913 Bacteria 422459
67 Ga0207695_10023122 3300025913 Bacteria 7034
68 Ga0207695_10025680 3300025913 Bacteria 6589
69 Ga0207681_10262638 3300025923 Bacteria 1352
70 Ga0207694_10009282 3300025924 Bacteria 7422
71 Ga0207694_10042777 3300025924 Bacteria 3495
72 Ga0207650_10021734 3300025925 Bacteria 4537
73 Ga0207650_10165713 3300025925 Bacteria 1753
74 Ga0207650_10233673 3300025925 Bacteria 1484
75 Ga0207650_10335282 3300025925 Bacteria 1241
76 Ga0207700_10235710 3300025928 Bacteria 1558
77 Ga0207644_10056639 3300025931 Bacteria 2829
78 Ga0207669_10046274 3300025937 Bacteria 2570
79 Ga0207711_10032159 3300025941 Bacteria 4435
80 Ga0207661_10037476 3300025944 Bacteria 3793
81 Ga0207661_10205530 3300025944 Bacteria 1733
82 Ga0207679_10147444 3300025945 Bacteria 1911
83 Ga0207667_10005832 3300025949 Bacteria 15009
84 Ga0207667_10020778 3300025949 Bacteria 7293
85 Ga0207668_10001583 3300025972 Bacteria 13306
86 Ga0207677_10134823 3300026023 Bacteria 1881
87 Ga0207703_10003901 3300026035 Bacteria 12382
88 Ga0207703_10028724 3300026035 Bacteria 4387
89 Ga0207639_10008813 3300026041 Bacteria 6934
90 Ga0207639_10273926 3300026041 Bacteria 1481
91 Ga0207678_10049263 3300026067 Bacteria 3641
92 Ga0207678_10066230 3300026067 Bacteria 3102
93 Ga0207678_10079753 3300026067 Bacteria 2803
94 Ga0207702_10012110 3300026078 Bacteria 7175
95 Ga0207702_10018691 3300026078 Bacteria 5733
96 Ga0207641_10200440 3300026088 Bacteria 1840
97 Ga0207676_10253485 3300026095 Bacteria 1585
98 Ga0207674_10001977 3300026116 Bacteria 25960
99 Ga0207675_100074095 3300026118 Bacteria 3186
100 Ga0207675_100226149 3300026118 Bacteria 1804
101 Ga0207683_10075658 3300026121 Bacteria 2980
102 Ga0268266_10013494 3300028379 Bacteria 7033
103 Ga0268265_10127592 3300028380 Bacteria 2108
104 Ga0307512_10100264 3300030522 Bacteria 1966
105 Ga0265340_10011286 3300031247 Bacteria 4754
106 Ga0307513_10010282 3300031456 Bacteria 11746
107 Ga0307509_10007679 3300031507 Bacteria 14014
108 Ga0307508_10003436 3300031616 Bacteria 16014
109 Ga0307516_10103500 3300031730 Bacteria 2660
110 Ga0307405_10026564 3300031731 Bacteria 3342
111 Ga0307413_10000067 3300031824 Bacteria 25867
112 Ga0307410_10007486 3300031852 Bacteria 5980
113 Ga0307406_10020262 3300031901 Bacteria 3914
114 Ga0307407_10002622 3300031903 Bacteria 7109
115 Ga0307409_100001605 3300031995 Bacteria 11313
116 Ga0307411_10239250 3300032005 Bacteria 1420
117 Ga0307415_100062706 3300032126 Unclassified 2580
118 Ga0307415_100227030 3300032126 Bacteria 1501
119 Ga0307415_100273574 3300032126 Bacteria 1385
120 Ga0373950_0006429 3300034818 Bacteria 1792
121 Ga0373951_0000546 3300035091 Bacteria 10585
122 Ga0373941_0001453 3300035115 Bacteria 5006
123 Ga0373942_0000028 3300035207 Bacteria 26905
124 Ga0373935_0037662 3300035692 Bacteria 3027
125 Ga0373937_0047105 3300036401 Bacteria 3944
126 Ga0373937_0221804 3300036401 Bacteria 1780
127 Ga0436364_0520855 3300037853 Bacteria 1522
128 Ga0400483_029989 3300039062 Bacteria 58053
129 Ga0400483_242281 3300039062 Bacteria 55044
130 Ga0466963_0000573 3300044694 Bacteria 17417
131 Ga0466967_0126690 3300045976 Bacteria 2366
132 Ga0495608_0014836 3300046511 Bacteria 5406
133 Ga0495667_0002634 3300046559 Bacteria 11984
134 Ga0495668_0001722 3300046616 Bacteria 20164
135 Ga0495657_0002235 3300046675 Bacteria 16391
136 Ga0496108_0000149 3300048911 Bacteria 67412
137 Ga0496112_0246144 3300048915 Bacteria 1740
138 Ga0501072_0007731 3300049588 Bacteria 8161
139 nmdc:mga05p37_216605_c1 3300050507 Bacteria 2312
140 nmdc:mga06r32_13641_c1 3300050510 Bacteria 7368
141 nmdc:mga08y16_22936_c1 3300050511 Bacteria 6589
142 Ga0500577_0029960 3300053142 Bacteria 1889
143 Ga0501084_0297927 3300054114 Unclassified 1362
144 2753268958 2751185782 Bacteria 11227053
145 2810363860 2808606700 Bacteria 3482157
146 2905930987 2905926851 Bacteria 4423176
147 Ga0070665_100022857
148 Ga0065715_10091147
149 Ga0070676_10022619
150 Ga0070670_100168799
151 Ga0070670_100191936
152 Ga0068868_100139315
153 Ga0068868_100242497
154 Ga0070661_100014913
155 Ga0070668_100006141
156 Ga0070668_100357211
157 Ga0070669_100292039
158 Ga0070675_100269142
159 Ga0070673_100091168
160 Ga0070688_100060810
161 Ga0070667_100134146
162 Ga0070663_100078520
163 Ga0070685_10055321
164 Ga0070684_100329605
165 Ga0068853_100020224
166 Ga0068853_100053620
167 Ga0068855_100003334
168 Ga0068855_100103014
169 Ga0070664_100230231
170 Ga0068857_100028140
171 Ga0068856_100025757
172 Ga0068852_100000020
173 Ga0068859_100045211
174 Ga0068859_100160117
175 Ga0068863_100190154
176 Ga0068863_100317529
177 Ga0068858_100001937
178 Ga0068858_100092030
179 Ga0068860_100185109
180 Ga0068862_100109255
181 Ga0068862_100210225
182 Ga0081539_10001842
183 Ga0081539_10011312
184 Ga0070717_10234385
185 Ga0097621_100091775
186 Ga0075431_100011058
187 Ga0097620_100045212
188 Ga0097620_100160120
189 Ga0105240_10007803
190 Ga0105240_10022639
191 Ga0105240_10093738
192 Ga0111539_10202424
193 Ga0105241_10000021
194 Ga0105248_10035609
195 Ga0105238_10009510
196 Ga0105238_10044545
197 Ga0105238_10141821
198 Ga0105239_10000725
199 Ga0105239_10213979
200 Ga0157369_10003992
201 Ga0157369_10004534
202 Ga0157374_10001525
203 Ga0157374_10111406
204 Ga0157372_10000659
205 Ga0163163_10344150
206 Ga0157380_10006755
207 Ga0157379_10238897
208 Ga0157376_10023893
209 Ga0163161_10052195
210 Ga0207654_10000053
211 Ga0207695_10000035
212 Ga0207695_10000047
213 Ga0207695_10023122
214 Ga0207695_10025680
215 Ga0207681_10262638
216 Ga0207694_10009282
217 Ga0207694_10042777
218 Ga0207650_10021734
219 Ga0207650_10165713
220 Ga0207650_10233673
221 Ga0207650_10335282
222 Ga0207700_10235710
223 Ga0207644_10056639
224 Ga0207669_10046274
225 Ga0207711_10032159
226 Ga0207661_10037476
227 Ga0207661_10205530
228 Ga0207679_10147444
229 Ga0207667_10005832
230 Ga0207667_10020778
231 Ga0207668_10001583
232 Ga0207677_10134823
233 Ga0207703_10003901
234 Ga0207703_10028724
235 Ga0207639_10008813
236 Ga0207639_10273926
237 Ga0207678_10049263
238 Ga0207678_10066230
239 Ga0207678_10079753
240 Ga0207702_10012110
241 Ga0207702_10018691
242 Ga0207641_10200440
243 Ga0207676_10253485
244 Ga0207674_10001977
245 Ga0207675_100074095
246 Ga0207675_100226149
247 Ga0207683_10075658
248 Ga0268266_10013494
249 Ga0268265_10127592
250 Ga0307512_10100264
251 Ga0265340_10011286
252 Ga0307513_10010282
253 Ga0307509_10007679
254 Ga0307508_10003436
255 Ga0307516_10103500
256 Ga0307405_10026564
257 Ga0307413_10000067
258 Ga0307410_10007486
259 Ga0307406_10020262
260 Ga0307407_10002622
261 Ga0307409_100001605
262 Ga0307411_10239250
263 Ga0307415_100062706
264 Ga0307415_100227030
265 Ga0307415_100273574
266 Ga0373950_0006429
267 Ga0373951_0000546
268 Ga0373941_0001453
269 Ga0373942_0000028
270 Ga0373935_0037662
271 Ga0373937_0047105
272 Ga0373937_0221804
273 Ga0436364_0520855
274 Ga0400483_029989
275 Ga0400483_242281
276 Ga0466963_0000573
277 Ga0466967_0126690
278 Ga0495608_0014836
279 Ga0495667_0002634
280 Ga0495668_0001722
281 Ga0495657_0002235
282 Ga0496108_0000149
283 Ga0496112_0246144
284 Ga0501072_0007731
285 nmdc:mga05p37_216605_c1
286 nmdc:mga06r32_13641_c1
287 nmdc:mga08y16_22936_c1
288 Ga0500577_0029960
289 Ga0501084_0297927
290 2753268958
291 2810363860
292 2905930987

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

4

110

0.94

PF01872

RibD_C

RibD C-terminal domain

157

381

0.89

PF14437

MafB19-deam

MafB19-like deaminase

5

153

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6p8c-assembly1.cif.gz_B 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate reductase (mthred) from methanothermobacter thermautotrophicus 0.9173 151 367
2azn-assembly1.cif.gz_A x-ray structure of 2,5-diamino-6-ribosylamino-4(3h)-pyrimidinone 5-phosphate reductase 0.9121 151 367
2hxv-assembly1.cif.gz_A-2 crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828) from thermotoga maritima at 1.80 a resolution 0.9098 6 365
6p8c-assembly1.cif.gz_B 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate reductase (mthred) from methanothermobacter thermautotrophicus 0.9091 151 367
2azn-assembly1.cif.gz_A x-ray structure of 2,5-diamino-6-ribosylamino-4(3h)-pyrimidinone 5-phosphate reductase 0.9001 151 367
ID Description Score Start End Superfamily
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9762 4 140 3.40.140.10
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9692 4 140 3.40.140.10
af_Q8GWP5_63_211_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.962 2 144 3.40.140.10
af_Q2FXF9_2_122_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9392 23 144 3.40.140.10
af_Q9STY4_178_394_3.40.430.10 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.9391 144 364 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A2V2SEQ9-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9826 279 366 GO:0008703
GO:0009231
AF-A0A6J4MC96-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 0.9811 5 121 GO:0008270
GO:0008835
GO:0009231
GO:0016491
AF-A0A6D0ET81-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 0.9808 6 130 GO:0008270
GO:0008835
GO:0009231
GO:0016491
AF-A0A0K9TB55-F1-model_v4 deleted 0.9802 6 144
AF-A0A6L9ZCP5-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 0.9797 1 148 GO:0008270
GO:0008835
GO:0009231
GO:0016491

Map