F195178

General Info

Members Datasets Scaffolds Average Seq Length
145 27 145 326

Family's Representative Sequence

Representative Sequence 3300033529|Ga0316587_1010838|Ga0316587_10108382
Length 355
Sequence LRRRCRLRTMPDEKNIGDDVMASLKARYMGIDLDNPLVVSSSGITGRTSSIARCADAGAGAVVLRSLFEEAIVAQSNDLNDQLFSTAAGRPEVYDYVHGDIGMHLGPLSYLEFIEKVRKKVALPVIASINCTSSRWWVPYARRIESSGADGLELNISHFPGSGKEDSRTLERQYAEIVHDVTSAVSIPVSAKIGFYFTSLGDVMEDMVAAGAKALVLFNRYHAIDVDLDNGRLVPAIKFSSPEELTLPLRWVAFAAQRLKCDIAASTGVHDSESILKMLMVGATAVQVCSTLYRNGPDHIKKLLTGLSSWLDDNGYGSVDEIRGLALKDSGGEQALLTRLQYVKALEEASEFYKY

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
4 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
5 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
6 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
7 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
8 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
9 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
10 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
15 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
16 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
17 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
18 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
19 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
20 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
21 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
22 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
23 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
24 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
25 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
26 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
27 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.48
Metatranscriptomes 5.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.69
Rhizosphere 96.55
Stem 0
Stem Tuber 0
Unclassified 2.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10015635 3300005327 Bacteria 6070
2 Ga0070683_100139403 3300005329 Bacteria 2297
3 Ga0075429_100043999 3300006880 Bacteria 3884
4 Ga0207705_10025103 3300025909 Unclassified 4254
5 Ga0316576_10032195 3300031727 Bacteria 3726
6 Ga0316576_10053352 3300031727 Unclassified 2946
7 Ga0316576_10057809 3300031727 Unclassified 2835
8 Ga0316578_10052588 3300031728 Bacteria 2387
9 Ga0316578_10105401 3300031728 Unclassified 1692
10 Ga0316578_10211207 3300031728 Unclassified 1167
11 Ga0316577_10007652 3300031733 Bacteria 5766
12 Ga0316577_10045548 3300031733 Bacteria 2451
13 Ga0316577_10087928 3300031733 Bacteria 1739
14 Ga0316585_10044348 3300032137 Unclassified 1421
15 Ga0316580_10006480 3300032139 Bacteria 3460
16 Ga0316580_10019453 3300032139 Bacteria 2090
17 Ga0316592_1022022 3300033524 Unclassified 1360
18 Ga0316588_1016633 3300033528 Bacteria 1632
19 Ga0316588_1023509 3300033528 Bacteria 1415
20 Ga0316588_1044980 3300033528 Unclassified 1061
21 Ga0316587_1010838 3300033529 Unclassified 1462
22 Ga0316587_1013456 3300033529 Unclassified 1340
23 Ga0316587_1014403 3300033529 Bacteria 1304
24 Ga0316596_1031216 3300033541 Unclassified 1383
25 Ga0316582_0022041 3300036647 Bacteria 3775
26 Ga0316582_0023498 3300036647 Bacteria 3676
27 Ga0316582_0039434 3300036647 Bacteria 2941
28 Ga0316582_0051213 3300036647 Bacteria 2619
29 Ga0316584_0002814 3300036712 Bacteria 11151
30 Ga0316584_0083880 3300036712 Bacteria 2387
31 Ga0316584_0084033 3300036712 Bacteria 2384
32 Ga0316584_0089260 3300036712 Bacteria 2308
33 Ga0316584_0096265 3300036712 Bacteria 2216
34 Ga0316584_0148271 3300036712 Unclassified 1747
35 Ga0400483_002676 3300039062 Bacteria 1328
36 Ga0400483_177125 3300039062 Bacteria 1383
37 Ga0400489_61775 3300039093 Unclassified 2346
38 Ga0451855_1852269 3300041511 Bacteria 2688
39 Ga0451577_0000034 3300042876 Bacteria 376183
40 Ga0451577_0000130 3300042876 Bacteria 167763
41 Ga0451577_0005180 3300042876 Bacteria 13414
42 Ga0451577_0011583 3300042876 Bacteria 8333
43 Ga0451577_0023561 3300042876 Bacteria 5612
44 Ga0451577_0024017 3300042876 Bacteria 5551
45 Ga0451577_0030843 3300042876 Bacteria 4841
46 Ga0451577_0045821 3300042876 Bacteria 3914
47 Ga0451577_0059067 3300042876 Bacteria 3420
48 Ga0451577_0102118 3300042876 Bacteria 2562
49 Ga0451577_0129824 3300042876 Bacteria 2260
50 Ga0451577_0134360 3300042876 Bacteria 2220
51 Ga0451577_0163491 3300042876 Bacteria 2005
52 Ga0451577_0170210 3300042876 Bacteria 1963
53 Ga0451577_0190788 3300042876 Bacteria 1848
54 Ga0451577_0211916 3300042876 Unclassified 1750
55 Ga0451577_0213738 3300042876 Bacteria 1742
56 Ga0451577_0234974 3300042876 Bacteria 1658
57 Ga0451577_0243345 3300042876 Bacteria 1628
58 Ga0451577_0328457 3300042876 Bacteria 1387
59 Ga0453683_0000016 3300044673 Bacteria 310845
60 Ga0453683_0000995 3300044673 Bacteria 26734
61 Ga0453683_0001107 3300044673 Bacteria 24654
62 Ga0453683_0002586 3300044673 Bacteria 13891
63 Ga0453683_0023165 3300044673 Bacteria 3958
64 Ga0453683_0046577 3300044673 Bacteria 2719
65 Ga0453683_0057309 3300044673 Bacteria 2437
66 Ga0453683_0059231 3300044673 Bacteria 2394
67 Ga0453683_0079143 3300044673 Bacteria 2058
68 Ga0453683_0114826 3300044673 Bacteria 1694
69 Ga0453683_0169854 3300044673 Bacteria 1381
70 Ga0453683_0191496 3300044673 Bacteria 1298
71 Ga0453683_0202174 3300044673 Bacteria 1261
72 Ga0453684_0000098 3300044712 Bacteria 376183
73 Ga0453684_0000301 3300044712 Bacteria 207812
74 Ga0453684_0000529 3300044712 Bacteria 145936
75 Ga0453684_0000610 3300044712 Bacteria 131386
76 Ga0453684_0000771 3300044712 Bacteria 110664
77 Ga0453684_0000800 3300044712 Bacteria 107265
78 Ga0453684_0002109 3300044712 Bacteria 50197
79 Ga0453684_0002121 3300044712 Bacteria 49974
80 Ga0453684_0002243 3300044712 Bacteria 47957
81 Ga0453684_0002510 3300044712 Bacteria 44256
82 Ga0453684_0003237 3300044712 Bacteria 37251
83 Ga0453684_0004834 3300044712 Bacteria 27663
84 Ga0453684_0005743 3300044712 Bacteria 24242
85 Ga0453684_0005904 3300044712 Bacteria 23738
86 Ga0453684_0006931 3300044712 Bacteria 21230
87 Ga0453684_0009320 3300044712 Bacteria 17224
88 Ga0453684_0016731 3300044712 Bacteria 11433
89 Ga0453684_0029416 3300044712 Bacteria 7799
90 Ga0453684_0030441 3300044712 Bacteria 7626
91 Ga0453684_0031971 3300044712 Bacteria 7378
92 Ga0453684_0037636 3300044712 Bacteria 6637
93 Ga0453684_0041516 3300044712 Bacteria 6220
94 Ga0453684_0045382 3300044712 Bacteria 5863
95 Ga0453684_0062731 3300044712 Bacteria 4758
96 Ga0453684_0070841 3300044712 Bacteria 4412
97 Ga0453684_0077692 3300044712 Bacteria 4158
98 Ga0453684_0080911 3300044712 Bacteria 4054
99 Ga0453684_0087187 3300044712 Bacteria 3869
100 Ga0453684_0091096 3300044712 Bacteria 3765
101 Ga0453684_0111592 3300044712 Bacteria 3321
102 Ga0453684_0126587 3300044712 Unclassified 3073
103 Ga0453684_0186914 3300044712 Bacteria 2427
104 Ga0453684_0272971 3300044712 Bacteria 1931
105 Ga0453684_0275912 3300044712 Unclassified 1919
106 Ga0453684_0354473 3300044712 Unclassified 1653
107 Ga0453684_0401390 3300044712 Bacteria 1535
108 Ga0453684_0451216 3300044712 Bacteria 1431
109 Ga0453684_0493259 3300044712 Bacteria 1357
110 Ga0453684_0540028 3300044712 Bacteria 1285
111 Ga0453684_0563497 3300044712 Bacteria 1253
112 Ga0453684_0669567 3300044712 Bacteria 1131
113 Ga0453684_0681117 3300044712 Bacteria 1119
114 Ga0451576_0000011 3300045051 Bacteria 676436
115 Ga0451576_0000036 3300045051 Bacteria 376183
116 Ga0451576_0000193 3300045051 Bacteria 154108
117 Ga0451576_0001037 3300045051 Bacteria 51291
118 Ga0451576_0001769 3300045051 Bacteria 35409
119 Ga0451576_0002558 3300045051 Bacteria 26853
120 Ga0451576_0003773 3300045051 Bacteria 20436
121 Ga0451576_0008711 3300045051 Bacteria 11872
122 Ga0451576_0016334 3300045051 Bacteria 8197
123 Ga0451576_0028693 3300045051 Bacteria 5958
124 Ga0451576_0035768 3300045051 Bacteria 5267
125 Ga0451576_0045471 3300045051 Bacteria 4623
126 Ga0451576_0060115 3300045051 Unclassified 3965
127 Ga0451576_0111551 3300045051 Bacteria 2846
128 Ga0451576_0136405 3300045051 Unclassified 2559
129 Ga0451576_0147887 3300045051 Bacteria 2450
130 Ga0451576_0158991 3300045051 Bacteria 2357
131 Ga0451576_0168398 3300045051 Bacteria 2286
132 Ga0451576_0202237 3300045051 Bacteria 2074
133 Ga0451576_0223146 3300045051 Bacteria 1968
134 Ga0451576_0228568 3300045051 Bacteria 1943
135 Ga0451576_0279603 3300045051 Bacteria 1745
136 Ga0451576_0288149 3300045051 Bacteria 1717
137 Ga0451576_0398776 3300045051 Bacteria 1442
138 Ga0451576_0398822 3300045051 Bacteria 1442
139 Ga0451576_0446592 3300045051 Bacteria 1357
140 Ga0451576_0690170 3300045051 Bacteria 1073
141 Ga0496110_0225986 3300048913 Bacteria 1702
142 Ga0501031_0195580 3300049568 Bacteria 1320
143 Ga0501076_0119702 3300049592 Bacteria 2132
144 Ga0501045_0078161 3300049824 Bacteria 2439
145 Ga0530510_0015969 3300061734 Bacteria 5306

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0563497 Ga0453684_0563497_10_813 260
2 3300044673 Ga0453683_0059231 Ga0453683_0059231_932_1759 268
3 3300039062 Ga0400483_002676 Ga0400483_002676_468_1298 269
4 3300039093 Ga0400489_61775 Ga0400489_61775_1330_2307 299
5 3300045051 Ga0451576_0690170 Ga0451576_0690170_125_1063 306
6 3300044712 Ga0453684_0080911 Ga0453684_0080911_2500_3483 310
7 3300005329 Ga0070683_100139403 Ga0070683_1001394031 311
8 3300044712 Ga0453684_0275912 Ga0453684_0275912_133_1089 312
9 3300045051 Ga0451576_0003773 Ga0451576_0003773_11628_12584 312
10 3300044712 Ga0453684_0004834 Ga0453684_0004834_6206_7168 314
11 3300031728 Ga0316578_10105401 Ga0316578_101054011 315
12 3300044712 Ga0453684_0681117 Ga0453684_0681117_142_1104 315
13 3300045051 Ga0451576_0008711 Ga0451576_0008711_4190_5191 317
14 3300031727 Ga0316576_10032195 Ga0316576_100321954 318
15 3300031727 Ga0316576_10057809 Ga0316576_100578092 318
16 3300031728 Ga0316578_10052588 Ga0316578_100525882 318
17 3300031728 Ga0316578_10211207 Ga0316578_102112072 318
18 3300031733 Ga0316577_10007652 Ga0316577_100076524 318
19 3300032137 Ga0316585_10044348 Ga0316585_100443482 318
20 3300032139 Ga0316580_10006480 Ga0316580_100064804 318
21 3300032139 Ga0316580_10019453 Ga0316580_100194532 318
22 3300036647 Ga0316582_0039434 Ga0316582_0039434_1573_2550 318
23 3300036712 Ga0316584_0002814 Ga0316584_0002814_4784_5764 318
24 3300036712 Ga0316584_0084033 Ga0316584_0084033_997_1974 318
25 3300036712 Ga0316584_0089260 Ga0316584_0089260_840_1817 318
26 3300036712 Ga0316584_0148271 Ga0316584_0148271_620_1597 318
27 3300042876 Ga0451577_0059067 Ga0451577_0059067_1093_2070 318
28 3300042876 Ga0451577_0102118 Ga0451577_0102118_1473_2450 318
29 3300044673 Ga0453683_0057309 Ga0453683_0057309_509_1486 318
30 3300044673 Ga0453683_0079143 Ga0453683_0079143_925_1902 318
31 3300044673 Ga0453683_0191496 Ga0453683_0191496_251_1225 318
32 3300044712 Ga0453684_0000529 Ga0453684_0000529_24192_25166 318
33 3300044712 Ga0453684_0000771 Ga0453684_0000771_47588_48565 318
34 3300044712 Ga0453684_0000800 Ga0453684_0000800_45383_46360 318
35 3300044712 Ga0453684_0030441 Ga0453684_0030441_936_1913 318
36 3300044712 Ga0453684_0077692 Ga0453684_0077692_482_1459 318
37 3300044712 Ga0453684_0111592 Ga0453684_0111592_1153_2130 318
38 3300044712 Ga0453684_0126587 Ga0453684_0126587_820_1797 318
39 3300044712 Ga0453684_0186914 Ga0453684_0186914_1025_2002 318
40 3300044712 Ga0453684_0451216 Ga0453684_0451216_312_1358 318
41 3300045051 Ga0451576_0060115 Ga0451576_0060115_2276_3250 318
42 3300045051 Ga0451576_0147887 Ga0451576_0147887_615_1592 318
43 3300045051 Ga0451576_0223146 Ga0451576_0223146_949_1926 318
44 3300045051 Ga0451576_0228568 Ga0451576_0228568_37_1014 318
45 3300045051 Ga0451576_0279603 Ga0451576_0279603_694_1671 318
46 3300036647 Ga0316582_0051213 Ga0316582_0051213_234_1220 319
47 3300041511 Ga0451855_1852269 Ga0451855_1852269_911_1891 319
48 3300044712 Ga0453684_0354473 Ga0453684_0354473_531_1508 319
49 3300045051 Ga0451576_0136405 Ga0451576_0136405_364_1341 319
50 3300031727 Ga0316576_10053352 Ga0316576_100533522 320
51 3300031733 Ga0316577_10087928 Ga0316577_100879282 320
52 3300033528 Ga0316588_1016633 Ga0316588_10166332 320
53 3300042876 Ga0451577_0005180 Ga0451577_0005180_4829_5812 320
54 3300042876 Ga0451577_0011583 Ga0451577_0011583_628_1617 320
55 3300042876 Ga0451577_0129824 Ga0451577_0129824_1083_2066 320
56 3300042876 Ga0451577_0170210 Ga0451577_0170210_45_1028 320
57 3300042876 Ga0451577_0211916 Ga0451577_0211916_72_1055 320
58 3300042876 Ga0451577_0234974 Ga0451577_0234974_271_1254 320
59 3300042876 Ga0451577_0328457 Ga0451577_0328457_151_1134 320
60 3300044673 Ga0453683_0169854 Ga0453683_0169854_36_1016 320
61 3300044712 Ga0453684_0000610 Ga0453684_0000610_76513_77496 320
62 3300044712 Ga0453684_0002109 Ga0453684_0002109_12756_13739 320
63 3300044712 Ga0453684_0002510 Ga0453684_0002510_5033_6013 320
64 3300044712 Ga0453684_0003237 Ga0453684_0003237_74_1057 320
65 3300044712 Ga0453684_0009320 Ga0453684_0009320_12599_13582 320
66 3300044712 Ga0453684_0037636 Ga0453684_0037636_406_1389 320
67 3300044712 Ga0453684_0041516 Ga0453684_0041516_95_1078 320
68 3300044712 Ga0453684_0540028 Ga0453684_0540028_74_1057 320
69 3300045051 Ga0451576_0000193 Ga0451576_0000193_76609_77592 320
70 3300045051 Ga0451576_0001037 Ga0451576_0001037_12800_13780 320
71 3300045051 Ga0451576_0002558 Ga0451576_0002558_3704_4687 320
72 3300036647 Ga0316582_0022041 Ga0316582_0022041_2722_3705 321
73 3300036647 Ga0316582_0023498 Ga0316582_0023498_573_1559 321
74 3300036712 Ga0316584_0083880 Ga0316584_0083880_1375_2358 321
75 3300036712 Ga0316584_0096265 Ga0316584_0096265_292_1275 321
76 3300042876 Ga0451577_0000034 Ga0451577_0000034_6016_7011 321
77 3300044673 Ga0453683_0000016 Ga0453683_0000016_215286_216272 321
78 3300044673 Ga0453683_0000995 Ga0453683_0000995_6016_7011 321
79 3300044712 Ga0453684_0000098 Ga0453684_0000098_6016_7011 321
80 3300044712 Ga0453684_0002121 Ga0453684_0002121_38842_39834 321
81 3300045051 Ga0451576_0000011 Ga0451576_0000011_585950_586936 321
82 3300045051 Ga0451576_0000036 Ga0451576_0000036_369173_370168 321
83 3300045051 Ga0451576_0288149 Ga0451576_0288149_98_1084 321
84 3300031733 Ga0316577_10045548 Ga0316577_100455483 322
85 3300042876 Ga0451577_0023561 Ga0451577_0023561_4389_5372 322
86 3300042876 Ga0451577_0243345 Ga0451577_0243345_46_1032 322
87 3300044673 Ga0453683_0202174 Ga0453683_0202174_42_1025 322
88 3300044712 Ga0453684_0272971 Ga0453684_0272971_798_1784 322
89 3300049568 Ga0501031_0195580 Ga0501031_0195580_317_1300 322
90 3300049592 Ga0501076_0119702 Ga0501076_0119702_822_1805 322
91 3300049824 Ga0501045_0078161 Ga0501045_0078161_499_1482 322
92 3300006880 Ga0075429_100043999 Ga0075429_1000439993 323
93 3300033524 Ga0316592_1022022 Ga0316592_10220221 323
94 3300033528 Ga0316588_1023509 Ga0316588_10235092 323
95 3300033528 Ga0316588_1044980 Ga0316588_10449801 323
96 3300033529 Ga0316587_1010838 Ga0316587_10108382 323
97 3300033529 Ga0316587_1013456 Ga0316587_10134562 323
98 3300033529 Ga0316587_1014403 Ga0316587_10144032 323
99 3300033541 Ga0316596_1031216 Ga0316596_10312162 323
100 3300039062 Ga0400483_177125 Ga0400483_177125_20_1018 323
101 3300042876 Ga0451577_0000130 Ga0451577_0000130_40656_41642 323
102 3300042876 Ga0451577_0024017 Ga0451577_0024017_2196_3182 323
103 3300042876 Ga0451577_0030843 Ga0451577_0030843_3560_4546 323
104 3300042876 Ga0451577_0045821 Ga0451577_0045821_428_1414 323
105 3300042876 Ga0451577_0134360 Ga0451577_0134360_19_1005 323
106 3300042876 Ga0451577_0163491 Ga0451577_0163491_16_1002 323
107 3300042876 Ga0451577_0190788 Ga0451577_0190788_756_1742 323
108 3300042876 Ga0451577_0213738 Ga0451577_0213738_306_1292 323
109 3300044673 Ga0453683_0001107 Ga0453683_0001107_12435_13421 323
110 3300044673 Ga0453683_0002586 Ga0453683_0002586_4132_5118 323
111 3300044673 Ga0453683_0023165 Ga0453683_0023165_2014_3000 323
112 3300044673 Ga0453683_0046577 Ga0453683_0046577_1235_2221 323
113 3300044673 Ga0453683_0114826 Ga0453683_0114826_543_1529 323
114 3300044712 Ga0453684_0000301 Ga0453684_0000301_61992_62978 323
115 3300044712 Ga0453684_0002243 Ga0453684_0002243_24600_25586 323
116 3300044712 Ga0453684_0005743 Ga0453684_0005743_2156_3142 323
117 3300044712 Ga0453684_0005904 Ga0453684_0005904_19399_20385 323
118 3300044712 Ga0453684_0006931 Ga0453684_0006931_6284_7270 323
119 3300044712 Ga0453684_0016731 Ga0453684_0016731_2554_3540 323
120 3300044712 Ga0453684_0029416 Ga0453684_0029416_3987_5021 323
121 3300044712 Ga0453684_0031971 Ga0453684_0031971_3110_4096 323
122 3300044712 Ga0453684_0045382 Ga0453684_0045382_1500_2534 323
123 3300044712 Ga0453684_0062731 Ga0453684_0062731_3586_4572 323
124 3300044712 Ga0453684_0070841 Ga0453684_0070841_1614_2603 323
125 3300044712 Ga0453684_0087187 Ga0453684_0087187_1040_2026 323
126 3300044712 Ga0453684_0091096 Ga0453684_0091096_2410_3396 323
127 3300044712 Ga0453684_0401390 Ga0453684_0401390_26_1012 323
128 3300044712 Ga0453684_0493259 Ga0453684_0493259_165_1151 323
129 3300044712 Ga0453684_0669567 Ga0453684_0669567_67_1053 323
130 3300045051 Ga0451576_0001769 Ga0451576_0001769_11669_12655 323
131 3300045051 Ga0451576_0016334 Ga0451576_0016334_5641_6675 323
132 3300045051 Ga0451576_0028693 Ga0451576_0028693_3843_4829 323
133 3300045051 Ga0451576_0045471 Ga0451576_0045471_2550_3536 323
134 3300045051 Ga0451576_0111551 Ga0451576_0111551_1503_2489 323
135 3300045051 Ga0451576_0158991 Ga0451576_0158991_71_1057 323
136 3300045051 Ga0451576_0168398 Ga0451576_0168398_242_1228 323
137 3300045051 Ga0451576_0202237 Ga0451576_0202237_751_1737 323
138 3300045051 Ga0451576_0398776 Ga0451576_0398776_371_1357 323
139 3300045051 Ga0451576_0398822 Ga0451576_0398822_340_1326 323
140 3300045051 Ga0451576_0446592 Ga0451576_0446592_11_997 323
141 3300048913 Ga0496110_0225986 Ga0496110_0225986_237_1223 323
142 3300061734 Ga0530510_0015969 Ga0530510_0015969_2289_3275 323
143 3300005327 Ga0070658_10015635 Ga0070658_100156353 328
144 3300025909 Ga0207705_10025103 Ga0207705_100251035 328
145 3300045051 Ga0451576_0035768 Ga0451576_0035768_1804_2790 328

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01180

DHO_dh

Dihydroorotate dehydrogenase

23

311

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lju-assembly2.cif.gz_D porcine dihydropyrimidine dehydrogenase (dpd) crosslinked with 5-ethynyluracil (5eu) 0.8039 3 292
7m32-assembly1.cif.gz_B dihydropyrimidine dehydrogenase (dpd) c671a mutant soaked with uracil and nadph anaerobically 0.7977 3 292
7m31-assembly1.cif.gz_A dihydropyrimidine dehydrogenase (dpd) c671s mutant soaked with thymine and nadph anaerobically 0.7961 2 292
7m32-assembly1.cif.gz_A dihydropyrimidine dehydrogenase (dpd) c671a mutant soaked with uracil and nadph anaerobically 0.796 2 292
7m31-assembly1.cif.gz_B dihydropyrimidine dehydrogenase (dpd) c671s mutant soaked with thymine and nadph anaerobically 0.7956 2 292
ID Description Score Start End Superfamily
af_Q58070_5_305_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8218 4 304 3.20.20.70
af_Q58070_5_305_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8144 4 304 3.20.20.70
3c61A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8118 1 303 3.20.20.70
3c61A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.795 1 303 3.20.20.70
af_P25889_6_307_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7915 4 291 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A351HEX9-F1-model_v4 Dihydroorotate dehydrogenase-like protein 0.9728 150 324 GO:0004152
GO:0005737
GO:0006207
GO:0006221
AF-A0A644YA32-F1-model_v4 Dihydroorotate dehydrogenase (EC 1.3.-.-) 0.9712 118 323 GO:0004152
GO:0005737
GO:0006207
AF-A0A7C3IDN4-F1-model_v4 Dihydroorotate dehydrogenase catalytic domain-containing protein 0.969 119 323 GO:0004152
GO:0005737
GO:0006207
GO:0006221
AF-A0A497CTN5-F1-model_v4 Diguanylate cyclase 0.9688 134 322 GO:0004152
GO:0005737
GO:0006207
AF-A0A497D782-F1-model_v4 Dihydroorotate dehydrogenase-like protein 0.9683 140 303 GO:0004152
GO:0005737
GO:0006207

Feature Viewer

pLDDT pTM Quality
86.69 0.85 High
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Predicted Structure (AlphaFold2)

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