F193273

General Info

Members Datasets Scaffolds Average Seq Length
144 133 288 636

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8055066027|8055067223
Length 714
Sequence LTVAASVAASLLVALPTYAAPATAPGVPVPAAGSLHAAVPGAPAFPAAPADPANSAVPATPASPAAPTAARQAAFKVAAGRYGVPESVLLGVSYLESRWDANRGVPSVTAGYGPMHLTDARAALPGTPHHSEGAEDPRGDDARPAKPASSPPASTASAAPPASGSASAAPVTSGNTGAAPPVDGAQTVDEAARLSGLPAERLVTDPDANLLGGAALLARYQKDLADAKDPGLAASRDPADWYGAVARYSGADDVQTARQFADEVFSVLREGASRTTDDGQQVSLPAGPEIAPRMDQVDRLGLREAEARNTECPKRLACEWFPAPYQKLSEDPGDYGNHDLSDRPHNQRIQYIVLHDTEETYDRTLKLVADPTYVSWHYTIRSADGHIAQHVKARDVAWHAGNWYVNAKSIGIEHEGFLAKAGSWYTEAMYRSSARLVGYLAKRYDIPLDRAHILGHDNVPGTVPGTVAGMHVDPGPYWDWGHYFALLHRPFKSTGGAHGGLVTIRTDYAHYRPRYTGCDQAGVDCPPHGSASVWLHTEPSDSAPLVKDIGRRPGGESTYDVSDHGARATTGQQYALAGREGDWTAIWYLGQLAWFRNPREAPTAVNATGLIVTPKPGRGPVPVYGRAYPEPEAYPAGVPVQAITPLQYVIPQGQRYSVGLVARGEYYYAVTFDPATHTVVRGRTLYYQIQLGHRVAFVKADDVNILPSAVRAPR

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
13 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
14 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
15 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
16 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
17 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
18 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
25 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
28 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
29 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
30 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
31 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
32 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
33 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
34 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
35 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
36 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
37 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
38 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
39 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
40 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
41 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
42 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
43 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
44 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
45 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
46 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
47 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
48 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
50 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
51 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
52 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
54 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
55 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
56 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
57 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
59 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
60 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
61 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
62 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
63 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
64 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
65 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
66 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
67 2643221714 Streptomyces sp. Root264 Isolate Unclassified
68 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
69 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
70 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
71 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
72 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
73 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
74 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
75 2808606448 Streptomyces sp. 193411 Isolate Unclassified
76 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
77 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
78 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
79 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
80 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
81 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
82 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
83 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
84 2858882152 Micromonospora noduli MED15 Isolate Nodule
85 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
86 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
87 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
88 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
89 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
90 2867428634 Streptomyces sp. RP5T Isolate Unclassified
91 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
92 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
93 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
94 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
95 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
96 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
97 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
98 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
99 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
100 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
101 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
102 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
103 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
104 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
105 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
106 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
107 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
108 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
109 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
110 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
111 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
112 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
113 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
114 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
115 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
116 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
117 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
118 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
119 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
120 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
121 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
122 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
123 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
124 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
125 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
126 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
127 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
128 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
129 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
130 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
131 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
132 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
133 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 47.22
Metatranscriptomes 2.78
Isolates 50

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.39
Nodule 4.86
Rhizoplane 0.69
Rhizosphere 58.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10005164 3300001979 Bacteria 5538
2 JGI24739J22299_10005145 3300001989 Bacteria 4981
3 JGI24737J22298_10003410 3300001990 Bacteria 5619
4 JGI25406J46586_10010435 3300003203 Bacteria 4122
5 Ga0070658_10081719 3300005327 Bacteria 2654
6 Ga0070683_100000904 3300005329 Bacteria 22054
7 Ga0070667_100039582 3300005367 Bacteria 3952
8 Ga0070679_100021137 3300005530 Bacteria 6349
9 Ga0070684_100095962 3300005535 Bacteria 2642
10 Ga0068857_100012401 3300005577 Bacteria 7420
11 Ga0081539_10000124 3300005985 Bacteria 180973
12 Ga0081539_10000143 3300005985 Bacteria 165345
13 Ga0157369_10034087 3300013105 Bacteria 5589
14 Ga0157372_10016676 3300013307 Bacteria 7885
15 Ga0206350_11055426 3300020080 Bacteria 2019
16 Ga0206354_10002723 3300020081 Bacteria 2053
17 Ga0206353_11906752 3300020082 Bacteria 3457
18 Ga0224712_10023144 3300022467 Bacteria 2153
19 Ga0207647_10010148 3300025904 Bacteria 6658
20 Ga0207652_10025730 3300025921 Bacteria 4896
21 Ga0207690_10057858 3300025932 Bacteria 2621
22 Ga0207661_10003360 3300025944 Bacteria 11114
23 Ga0207661_10008354 3300025944 Bacteria 7393
24 Ga0207674_10023837 3300026116 Bacteria 6548
25 Ga0207674_10050399 3300026116 Bacteria 4253
26 Ga0268264_10153506 3300028381 Bacteria 2067
27 Ga0307517_10012877 3300028786 Bacteria 11423
28 Ga0307515_10000106 3300028794 Bacteria 197218
29 Ga0307515_10020086 3300028794 Bacteria 11957
30 Ga0307515_10100893 3300028794 Bacteria 3490
31 Ga0307511_10074121 3300030521 Bacteria 2456
32 Ga0307513_10026968 3300031456 Bacteria 6608
33 Ga0307513_10054783 3300031456 Bacteria 4273
34 Ga0307509_10014357 3300031507 Bacteria 9317
35 Ga0307514_10001574 3300031649 Bacteria 27012
36 Ga0307516_10006786 3300031730 Bacteria 13355
37 Ga0307518_10001238 3300031838 Bacteria 19162
38 Ga0395898_0077495 3300037466 Bacteria 3209
39 Ga0439439_0009610 3300041406 Bacteria 2304
40 Ga0439457_001824 3300042014 Bacteria 6293
41 Ga0450894_000175 3300042131 Bacteria 11408
42 Ga0466961_0006608 3300044693 Bacteria 7373
43 Ga0466960_0002721 3300044901 Bacteria 6683
44 Ga0495651_0070286 3300046462 Bacteria 2664
45 Ga0495625_0013671 3300046660 Bacteria 6509
46 Ga0495588_0004416 3300046674 Bacteria 6215
47 Ga0495671_0008849 3300046692 Bacteria 5653
48 Ga0495636_0027430 3300047318 Bacteria 2320
49 Ga0495685_008898 3300047447 Bacteria 3347
50 Ga0495681_0001335 3300047470 Bacteria 18612
51 Ga0495614_0004526 3300048089 Bacteria 6273
52 Ga0495614_0012424 3300048089 Bacteria 3736
53 Ga0496112_0176068 3300048915 Bacteria 2104
54 Ga0501033_0001100 3300049570 Bacteria 24510
55 Ga0501033_0020268 3300049570 Bacteria 5024
56 Ga0501034_0002133 3300049571 Bacteria 24572
57 Ga0501036_0000299 3300049572 Bacteria 34329
58 Ga0501036_0026274 3300049572 Bacteria 4913
59 Ga0501038_0039527 3300049574 Bacteria 4126
60 Ga0501042_0022404 3300049578 Bacteria 4413
61 Ga0501043_0001731 3300049579 Bacteria 18853
62 Ga0501047_0000103 3300049581 Bacteria 104053
63 Ga0501068_0051888 3300049584 Bacteria 2482
64 Ga0501070_0000250 3300049586 Bacteria 50587
65 Ga0501074_0020812 3300049590 Bacteria 4765
66 Ga0501035_0001274 3300049822 Bacteria 26045
67 Ga0501044_0000831 3300049823 Bacteria 37090
68 Ga0501044_0015305 3300049823 Bacteria 8262
69 Ga0501044_0119483 3300049823 Bacteria 2638
70 nmdc:mga06r32_512_c7 3300050510 Bacteria 2126
71 Ga0500646_0000190 3300053090 Bacteria 18563
72 Ga0500577_0003022 3300053142 Bacteria 4343
73 8055067223 8055066027 Bacteria 9479577
74 2547408860 2547132111 Bacteria 8013147
75 2585316357 2582581314 Bacteria 11452267
76 2586064471 2585427649 Bacteria 9053857
77 2644441867 2643221678 Bacteria 9540101
78 2644630769 2643221714 Bacteria 9015452
79 2676489018 2675903060 Bacteria 10051191
80 2772642738 2772190715 Bacteria 6959372
81 2784586037 2784132148 Bacteria 8627943
82 2785346895 2784746763 Bacteria 9783172
83 2786667265 2786546132 Bacteria 10419719
84 2795781503 2795385470 Bacteria 8317180
85 2808846883 2808606359 Bacteria 9866990
86 2809229537 2808606448 Bacteria 8656184
87 2809586305 2808606522 Bacteria 9488490
88 2811846456 2808606982 Bacteria 7791042
89 2812477218 2811994917 Bacteria 7761064
90 2816425222 2816332119 Bacteria 8120218
91 2855671920 2855670206 Bacteria 7120389
92 2855677005 2855676851 Bacteria 7063653
93 2857289537 2857288857 Bacteria 7189066
94 2858852567 2858848962 Bacteria 6963058
95 2858884495 2858882152 Bacteria 7230291
96 2858893051 2858888857 Bacteria 7060307
97 2858898658 2858895516 Bacteria 7378898
98 2858904813 2858902515 Bacteria 7086037
99 2862392602 2862382967 Bacteria 10317375
100 2862512801 2862507626 Bacteria 9425308
101 2867432300 2867428634 Bacteria 9590268
102 2869053163 2869048445 Bacteria 6875584
103 2869064626 2869061728 Bacteria 7112407
104 2869074283 2869068681 Bacteria 7205615
105 2873152333 2873151551 Bacteria 8625867
106 2873321206 2873314349 Bacteria 8512634
107 2877684227 2877676314 Bacteria 9512378
108 2880494373 2880489317 Bacteria 7096270
109 2880497938 2880495981 Bacteria 7340502
110 2884702629 2884693830 Bacteria 11273186
111 2895429425 2895427314 Bacteria 13147766
112 2895452129 2895442618 Bacteria 11027144
113 2912723675 2912715099 Bacteria 9460473
114 2915769775 2915768154 Bacteria 8424322
115 2919473907 2919468124 Bacteria 9133025
116 2929226514 2929226422 Bacteria 7248583
117 2946073048 2946072368 Bacteria 8999607
118 2954008197 2954002825 Bacteria 9173742
119 2954389560 2954380949 Bacteria 10050426
120 2954682353 2954673503 Bacteria 9685905
121 2954690571 2954682443 Bacteria 9862841
122 2954700401 2954691527 Bacteria 10720516
123 2954701826 2954701450 Bacteria 10834262
124 2954719078 2954711539 Bacteria 10867210
125 2954729048 2954721474 Bacteria 10456478
126 2954732763 2954731030 Bacteria 10243860
127 2954747947 2954740390 Bacteria 10229294
128 2954751641 2954749733 Bacteria 10366972
129 2990066079 2990059506 Bacteria 9321252
130 2990093428 2990088156 Bacteria 6657676
131 2996228263 2996221748 Bacteria 6799777
132 3006498587 3006493962 Bacteria 8825450
133 8003873134 8003870546 Bacteria 7396674
134 8008487091 8008485437 Bacteria 7198341
135 8008560266 8008558824 Bacteria 10610750
136 8008581379 8008574985 Bacteria 7815457
137 8023631456 8023623736 Bacteria 8593882
138 8025525148 8025524527 Bacteria 7197316
139 8048414222 8048406513 Bacteria 8936924
140 8054710586 8054704163 Bacteria 7247792
141 8054729229 8054727385 Bacteria 7558670
142 8054737009 8054734606 Bacteria 6947278
143 8055174253 8055172936 Bacteria 9305943
144 8057569331 8057568493 Bacteria 7221719
145 JGI24740J21852_10005164
146 JGI24739J22299_10005145
147 JGI24737J22298_10003410
148 JGI25406J46586_10010435
149 Ga0070658_10081719
150 Ga0070683_100000904
151 Ga0070667_100039582
152 Ga0070679_100021137
153 Ga0070684_100095962
154 Ga0068857_100012401
155 Ga0081539_10000124
156 Ga0081539_10000143
157 Ga0157369_10034087
158 Ga0157372_10016676
159 Ga0206350_11055426
160 Ga0206354_10002723
161 Ga0206353_11906752
162 Ga0224712_10023144
163 Ga0207647_10010148
164 Ga0207652_10025730
165 Ga0207690_10057858
166 Ga0207661_10003360
167 Ga0207661_10008354
168 Ga0207674_10023837
169 Ga0207674_10050399
170 Ga0268264_10153506
171 Ga0307517_10012877
172 Ga0307515_10000106
173 Ga0307515_10020086
174 Ga0307515_10100893
175 Ga0307511_10074121
176 Ga0307513_10026968
177 Ga0307513_10054783
178 Ga0307509_10014357
179 Ga0307514_10001574
180 Ga0307516_10006786
181 Ga0307518_10001238
182 Ga0395898_0077495
183 Ga0439439_0009610
184 Ga0439457_001824
185 Ga0450894_000175
186 Ga0466961_0006608
187 Ga0466960_0002721
188 Ga0495651_0070286
189 Ga0495625_0013671
190 Ga0495588_0004416
191 Ga0495671_0008849
192 Ga0495636_0027430
193 Ga0495685_008898
194 Ga0495681_0001335
195 Ga0495614_0004526
196 Ga0495614_0012424
197 Ga0496112_0176068
198 Ga0501033_0001100
199 Ga0501033_0020268
200 Ga0501034_0002133
201 Ga0501036_0000299
202 Ga0501036_0026274
203 Ga0501038_0039527
204 Ga0501042_0022404
205 Ga0501043_0001731
206 Ga0501047_0000103
207 Ga0501068_0051888
208 Ga0501070_0000250
209 Ga0501074_0020812
210 Ga0501035_0001274
211 Ga0501044_0000831
212 Ga0501044_0015305
213 Ga0501044_0119483
214 nmdc:mga06r32_512_c7
215 Ga0500646_0000190
216 Ga0500577_0003022
217 8055067223
218 2547408860
219 2585316357
220 2586064471
221 2644441867
222 2644630769
223 2676489018
224 2772642738
225 2784586037
226 2785346895
227 2786667265
228 2795781503
229 2808846883
230 2809229537
231 2809586305
232 2811846456
233 2812477218
234 2816425222
235 2855671920
236 2855677005
237 2857289537
238 2858852567
239 2858884495
240 2858893051
241 2858898658
242 2858904813
243 2862392602
244 2862512801
245 2867432300
246 2869053163
247 2869064626
248 2869074283
249 2873152333
250 2873321206
251 2877684227
252 2880494373
253 2880497938
254 2884702629
255 2895429425
256 2895452129
257 2912723675
258 2915769775
259 2919473907
260 2929226514
261 2946073048
262 2954008197
263 2954389560
264 2954682353
265 2954690571
266 2954700401
267 2954701826
268 2954719078
269 2954729048
270 2954732763
271 2954747947
272 2954751641
273 2990066079
274 2990093428
275 2996228263
276 3006498587
277 8003873134
278 8008487091
279 8008560266
280 8008581379
281 8023631456
282 8025525148
283 8048414222
284 8054710586
285 8054729229
286 8054737009
287 8055174253
288 8057569331

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01510

Amidase_2

N-acetylmuramoyl-L-alanine amidase

345

476

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2krs-assembly1.cif.gz_A solution nmr structure of sh3 domain from cpf_0587 (fragment 415-479) from clostridium perfringens. northeast structural genomics consortium (nesg) target cpr74a. 0.8458 404 500
2kt8-assembly1.cif.gz_A solution nmr structure of the cpe1231(468-535) protein from clostridium perfringens, northeast structural genomics consortium target cpr82b 0.7883 403 500
7f5i-assembly1.cif.gz_A x-ray structure of clostridium perfringens-specific amidase endolysin 0.7523 220 356
6srt-assembly1.cif.gz_A endolysine n-acetylmuramoyl-l-alanine amidase lyscs from clostridium intestinale urnw 0.7222 221 362
6ssc-assembly1.cif.gz_A n-acetylmuramoyl-l-alanine amidase lysc from clostridium intestinale urnw 0.7094 220 362
ID Description Score Start End Superfamily
af_Q2FXU3_37_103_2.30.30.40 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8737 403 498 2.30.30.40
2krsA01 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.873 434 500 2.30.30.40
4r0kB02 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8439 403 511 2.30.30.40
2kt8A00 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.7883 403 500 2.30.30.40
4r0kB02 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.7482 403 511 2.30.30.40
ID Description Score Start End GO Terms
AF-A0A7K2L379-F1-model_v4 N-acetylmuramoyl-L-alanine amidase 0.9712 433 615
AF-A0A1Z1W4F1-F1-model_v4 Amidase 0.9668 468 617
AF-A0A2W6DB80-F1-model_v4 Uncharacterized protein 0.9655 413 614
AF-A0A7K2L379-F1-model_v4 N-acetylmuramoyl-L-alanine amidase 0.9607 433 615
AF-A0A6B1JNJ3-F1-model_v4 deleted 0.9594 409 617

Map