F193064

General Info

Members Datasets Scaffolds Average Seq Length
144 101 288 396

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_174559_c1|nmdc:mga0n895_174559_c1_63_1511
Length 482
Sequence VSAVRNATSARNFAALAGRARADGVLSAGAAPVSVAPTIDVPLTPDRRFVDASRGPCIGLWGLRLIAGSARSARPSLNSKERHTMRKIREAVVVESQRTGLAKSFRGSFNQTRPDDLAAHCVKAVLAKVPQLDVKEIDDVVMGTGFPEGPQGFNVGRNVAVLSGLPHQIAGGTVSRFCSSGLNAVAVAAHMVENEGADAVMAGGLESITMMQNDFSKHLLFNPWLTEHYKQIYMPMGLTAEVVAERYKISREAQDEYALASQQRTAAFQKSGKDTEEITPMTVTMEVADKATGAKSQKQVTVAHDECNRPDTTIEGLRKLPGAFNPNGSVTAGNSSQFSDGASATLIMSAERAKALGIKPLGFFRGTVFAGCEADEMGIGPVFAVPKLLSRAGLKIDDIDIVELNEAFASQVVYCRDKLGIPMEKLNLNGGSIAIGHPYGMTGSRMVGTLLRELQRRKKRWGIVTMCIGGGMGAAGLFEAAL

Samples

Sample ID Description Type Environment
1 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
2 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
56 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
57 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
58 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
64 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
65 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
66 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
67 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
69 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
72 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
92 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
93 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
101 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.61
Metatranscriptomes 0
Isolates 1.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.69
Nodule 0
Rhizoplane 0.69
Rhizosphere 91.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0n895_174559_c1 3300050512 Bacteria 2180
2 Ga0070669_100034984 3300005353 Bacteria 3638
3 Ga0070709_10162963 3300005434 Bacteria 1552
4 Ga0070694_100004021 3300005444 Bacteria 8806
5 Ga0070708_100039920 3300005445 Bacteria 4109
6 Ga0070708_100072607 3300005445 Bacteria 3100
7 Ga0070708_100206327 3300005445 Bacteria 1841
8 Ga0070706_100001869 3300005467 Bacteria 21738
9 Ga0070707_100006489 3300005468 Bacteria 10866
10 Ga0070707_100084627 3300005468 Bacteria 3064
11 Ga0070698_100003055 3300005471 Bacteria 18451
12 Ga0070698_100008490 3300005471 Bacteria 11095
13 Ga0070698_100009133 3300005471 Bacteria 10643
14 Ga0070698_100011112 3300005471 Bacteria 9567
15 Ga0070699_100000018 3300005518 Bacteria 190128
16 Ga0070699_100002591 3300005518 Bacteria 16208
17 Ga0070699_100021434 3300005518 Bacteria 5573
18 Ga0070699_100048953 3300005518 Bacteria 3658
19 Ga0070697_100005277 3300005536 Bacteria 9921
20 Ga0070697_100087969 3300005536 Bacteria 2565
21 Ga0070697_100135927 3300005536 Bacteria 2064
22 Ga0070696_100000011 3300005546 Bacteria 82210
23 Ga0068863_100059950 3300005841 Bacteria 3600
24 Ga0068862_100126920 3300005844 Bacteria 2253
25 Ga0068862_100238112 3300005844 Bacteria 1654
26 Ga0081455_10006437 3300005937 Bacteria 12587
27 Ga0081455_10028532 3300005937 Bacteria 5098
28 Ga0070717_10007199 3300006028 Bacteria 8250
29 Ga0070715_10044785 3300006163 Bacteria 1873
30 Ga0075431_100132889 3300006847 Bacteria 2566
31 Ga0075433_10000423 3300006852 Bacteria 27086
32 Ga0075434_100062650 3300006871 Bacteria 3702
33 Ga0068865_100112293 3300006881 Bacteria 2013
34 Ga0075436_100044201 3300006914 Bacteria 3071
35 Ga0075435_100058284 3300007076 Bacteria 3127
36 Ga0075435_100077789 3300007076 Bacteria 2720
37 Ga0105240_10137545 3300009093 Bacteria 2924
38 Ga0111539_10049307 3300009094 Bacteria 5022
39 Ga0105245_10011679 3300009098 Bacteria 7643
40 Ga0114129_10100285 3300009147 Bacteria 4007
41 Ga0105248_10458619 3300009177 Bacteria 1437
42 Ga0105246_10091753 3300011119 Bacteria 2190
43 Ga0157378_10062646 3300013297 Bacteria 3321
44 Ga0157378_10179700 3300013297 Bacteria 1990
45 Ga0163162_10037846 3300013306 Bacteria 4815
46 Ga0157372_10305356 3300013307 Bacteria 1851
47 Ga0157375_10000083 3300013308 Bacteria 94512
48 Ga0163163_10000060 3300014325 Bacteria 121560
49 Ga0157380_10410754 3300014326 Bacteria 1287
50 Ga0213876_10002476 3300021384 Bacteria 10841
51 Ga0213875_10000006 3300021388 Bacteria 579005
52 Ga0213875_10014466 3300021388 Bacteria 3849
53 Ga0207642_10120589 3300025899 Bacteria 1352
54 Ga0207699_10113888 3300025906 Bacteria 1738
55 Ga0207684_10000137 3300025910 Bacteria 132561
56 Ga0207684_10032876 3300025910 Bacteria 4411
57 Ga0207684_10182719 3300025910 Bacteria 1808
58 Ga0207695_10101282 3300025913 Bacteria 2875
59 Ga0207646_10003063 3300025922 Bacteria 19239
60 Ga0207646_10102028 3300025922 Bacteria 2572
61 Ga0207646_10174620 3300025922 Bacteria 1941
62 Ga0207694_10051702 3300025924 Bacteria 3185
63 Ga0207687_10074972 3300025927 Bacteria 2426
64 Ga0207664_10071107 3300025929 Bacteria 2802
65 Ga0207670_10052596 3300025936 Bacteria 2739
66 Ga0207670_10269900 3300025936 Bacteria 1322
67 Ga0207665_10006625 3300025939 Bacteria 7684
68 Ga0207665_10091118 3300025939 Bacteria 2114
69 Ga0207679_10174485 3300025945 Bacteria 1773
70 Ga0207712_10120790 3300025961 Bacteria 1982
71 Ga0207641_10097437 3300026088 Bacteria 2585
72 Ga0207648_10171106 3300026089 Bacteria 1920
73 Ga0207428_10001506 3300027907 Bacteria 24366
74 Ga0207428_10142238 3300027907 Bacteria 1830
75 Ga0268266_10244840 3300028379 Bacteria 1656
76 Ga0268265_10171654 3300028380 Bacteria 1854
77 Ga0265318_10034758 3300028577 Bacteria 1941
78 Ga0265330_10020056 3300031235 Bacteria 3056
79 Ga0265332_10000600 3300031238 Bacteria 23614
80 Ga0265332_10018176 3300031238 Bacteria 3101
81 Ga0265320_10012224 3300031240 Bacteria 5010
82 Ga0265339_10000152 3300031249 Bacteria 57034
83 Ga0265339_10103939 3300031249 Bacteria 1475
84 Ga0265331_10000034 3300031250 Bacteria 200155
85 Ga0265331_10004955 3300031250 Bacteria 8178
86 Ga0265316_10000150 3300031344 Bacteria 76744
87 Ga0307509_10000070 3300031507 Bacteria 141228
88 Ga0265314_10000243 3300031711 Bacteria 80390
89 Ga0265314_10003123 3300031711 Bacteria 16286
90 Ga0373926_0024728 3300035083 Bacteria 2093
91 Ga0373954_0014480 3300035118 Bacteria 3516
92 Ga0373956_0024439 3300035119 Bacteria 2603
93 Ga0373955_0021747 3300035172 Bacteria 3243
94 Ga0373924_0071783 3300035410 Bacteria 1461
95 Ga0373931_0041954 3300035691 Bacteria 2405
96 Ga0373935_0040810 3300035692 Bacteria 2913
97 Ga0373935_0081236 3300035692 Bacteria 2107
98 Ga0373927_0025362 3300035695 Bacteria 3875
99 Ga0373933_0053308 3300035724 Bacteria 2422
100 Ga0373947_0048304 3300035725 Bacteria 2553
101 Ga0373937_0013516 3300036401 Bacteria 7192
102 Ga0373937_0032865 3300036401 Bacteria 4707
103 Ga0373937_0068201 3300036401 Bacteria 3279
104 Ga0373925_0133859 3300037068 Bacteria 1935
105 Ga0436364_0195622 3300037853 Bacteria 5065
106 Ga0436364_0578709 3300037853 Bacteria 2421
107 Ga0436364_0942448 3300037853 Bacteria 4875
108 Ga0436364_0998134 3300037853 Bacteria 1723
109 Ga0436365_1847227 3300039437 Bacteria 10331
110 Ga0466969_0023038 3300044656 Bacteria 3211
111 Ga0451576_0037762 3300045051 Bacteria 5114
112 Ga0451576_0111886 3300045051 Bacteria 2842
113 Ga0495650_0000063 3300046471 Bacteria 277841
114 Ga0495580_0000423 3300046472 Bacteria 35086
115 Ga0495628_0219780 3300046516 Bacteria 1427
116 Ga0495667_0071641 3300046559 Bacteria 2260
117 Ga0495613_0169963 3300046689 Bacteria 1548
118 Ga0495674_0171362 3300047319 Bacteria 1811
119 Ga0496109_0000026 3300048912 Bacteria 171405
120 Ga0501034_0049949 3300049571 Bacteria 4219
121 Ga0501034_0177887 3300049571 Bacteria 2093
122 Ga0501043_0069598 3300049579 Bacteria 2764
123 Ga0501046_0036373 3300049580 Bacteria 3962
124 Ga0501046_0079157 3300049580 Bacteria 2541
125 Ga0501047_0003535 3300049581 Bacteria 14758
126 Ga0501047_0043517 3300049581 Bacteria 4338
127 Ga0501070_0000734 3300049586 Bacteria 29974
128 Ga0501072_0197937 3300049588 Bacteria 1602
129 Ga0501075_0209091 3300049591 Bacteria 1488
130 Ga0501075_0216363 3300049591 Bacteria 1461
131 Ga0501081_0222331 3300049743 Bacteria 1373
132 Ga0501044_0043201 3300049823 Bacteria 4684
133 Ga0501044_0121379 3300049823 Bacteria 2614
134 nmdc:mga09592_192666_c1 3300050508 Bacteria 1764
135 nmdc:mga08y16_51578_c1 3300050511 Bacteria 4304
136 nmdc:mga08y16_9190_c1 3300050511 Bacteria 10374
137 nmdc:mga0n895_24644_c1 3300050512 Bacteria 5673
138 nmdc:mga0n895_293957_c1 3300050512 Bacteria 1647
139 nmdc:mga0a205_136304_c1 3300050515 Bacteria 2355
140 nmdc:mga0a205_167547_c1 3300050515 Bacteria 2093
141 Ga0500566_0000338 3300053094 Bacteria 25497
142 Ga0501082_0133288 3300060353 Bacteria 2156
143 2857597093 2857591370 Bacteria 6569758
144 2936340758 2936340661 Bacteria 5139038
145 nmdc:mga0n895_174559_c1
146 Ga0070669_100034984
147 Ga0070709_10162963
148 Ga0070694_100004021
149 Ga0070708_100039920
150 Ga0070708_100072607
151 Ga0070708_100206327
152 Ga0070706_100001869
153 Ga0070707_100006489
154 Ga0070707_100084627
155 Ga0070698_100003055
156 Ga0070698_100008490
157 Ga0070698_100009133
158 Ga0070698_100011112
159 Ga0070699_100000018
160 Ga0070699_100002591
161 Ga0070699_100021434
162 Ga0070699_100048953
163 Ga0070697_100005277
164 Ga0070697_100087969
165 Ga0070697_100135927
166 Ga0070696_100000011
167 Ga0068863_100059950
168 Ga0068862_100126920
169 Ga0068862_100238112
170 Ga0081455_10006437
171 Ga0081455_10028532
172 Ga0070717_10007199
173 Ga0070715_10044785
174 Ga0075431_100132889
175 Ga0075433_10000423
176 Ga0075434_100062650
177 Ga0068865_100112293
178 Ga0075436_100044201
179 Ga0075435_100058284
180 Ga0075435_100077789
181 Ga0105240_10137545
182 Ga0111539_10049307
183 Ga0105245_10011679
184 Ga0114129_10100285
185 Ga0105248_10458619
186 Ga0105246_10091753
187 Ga0157378_10062646
188 Ga0157378_10179700
189 Ga0163162_10037846
190 Ga0157372_10305356
191 Ga0157375_10000083
192 Ga0163163_10000060
193 Ga0157380_10410754
194 Ga0213876_10002476
195 Ga0213875_10000006
196 Ga0213875_10014466
197 Ga0207642_10120589
198 Ga0207699_10113888
199 Ga0207684_10000137
200 Ga0207684_10032876
201 Ga0207684_10182719
202 Ga0207695_10101282
203 Ga0207646_10003063
204 Ga0207646_10102028
205 Ga0207646_10174620
206 Ga0207694_10051702
207 Ga0207687_10074972
208 Ga0207664_10071107
209 Ga0207670_10052596
210 Ga0207670_10269900
211 Ga0207665_10006625
212 Ga0207665_10091118
213 Ga0207679_10174485
214 Ga0207712_10120790
215 Ga0207641_10097437
216 Ga0207648_10171106
217 Ga0207428_10001506
218 Ga0207428_10142238
219 Ga0268266_10244840
220 Ga0268265_10171654
221 Ga0265318_10034758
222 Ga0265330_10020056
223 Ga0265332_10000600
224 Ga0265332_10018176
225 Ga0265320_10012224
226 Ga0265339_10000152
227 Ga0265339_10103939
228 Ga0265331_10000034
229 Ga0265331_10004955
230 Ga0265316_10000150
231 Ga0307509_10000070
232 Ga0265314_10000243
233 Ga0265314_10003123
234 Ga0373926_0024728
235 Ga0373954_0014480
236 Ga0373956_0024439
237 Ga0373955_0021747
238 Ga0373924_0071783
239 Ga0373931_0041954
240 Ga0373935_0040810
241 Ga0373935_0081236
242 Ga0373927_0025362
243 Ga0373933_0053308
244 Ga0373947_0048304
245 Ga0373937_0013516
246 Ga0373937_0032865
247 Ga0373937_0068201
248 Ga0373925_0133859
249 Ga0436364_0195622
250 Ga0436364_0578709
251 Ga0436364_0942448
252 Ga0436364_0998134
253 Ga0436365_1847227
254 Ga0466969_0023038
255 Ga0451576_0037762
256 Ga0451576_0111886
257 Ga0495650_0000063
258 Ga0495580_0000423
259 Ga0495628_0219780
260 Ga0495667_0071641
261 Ga0495613_0169963
262 Ga0495674_0171362
263 Ga0496109_0000026
264 Ga0501034_0049949
265 Ga0501034_0177887
266 Ga0501043_0069598
267 Ga0501046_0036373
268 Ga0501046_0079157
269 Ga0501047_0003535
270 Ga0501047_0043517
271 Ga0501070_0000734
272 Ga0501072_0197937
273 Ga0501075_0209091
274 Ga0501075_0216363
275 Ga0501081_0222331
276 Ga0501044_0043201
277 Ga0501044_0121379
278 nmdc:mga09592_192666_c1
279 nmdc:mga08y16_51578_c1
280 nmdc:mga08y16_9190_c1
281 nmdc:mga0n895_24644_c1
282 nmdc:mga0n895_293957_c1
283 nmdc:mga0a205_136304_c1
284 nmdc:mga0a205_167547_c1
285 Ga0500566_0000338
286 Ga0501082_0133288
287 2857597093
288 2936340758

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02803

Thiolase_C

Thiolase, C-terminal domain

358

480

0.97

PF00108

Thiolase_N

Thiolase, N-terminal domain

91

351

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wdl-assembly1.cif.gz_C fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form ii (native4) 0.952 3 394
4ubt-assembly3.cif.gz_D structure of the c93s variant of the 3-ketoacyl-coa thiolase fada5 from m. tuberculosis in complex with a steroid and coa. 0.9484 1 394
2iik-assembly1.cif.gz_B crystal structure of human peroxisomal acetyl-coa acyl transferase 1 (acaa1) 0.9481 2 394
2iik-assembly1.cif.gz_A crystal structure of human peroxisomal acetyl-coa acyl transferase 1 (acaa1) 0.9473 2 394
4e1l-assembly1.cif.gz_D crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9465 1 392
ID Description Score Start End Superfamily
af_O53871_287_399_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9862 278 388 3.40.47.10
af_A0A096MJY8_281_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9837 278 388 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9737 266 394 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9664 266 394 3.40.47.10
1ulqE02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.962 127 394 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A561SZT7-F1-model_v4 Acetyl-CoA acetyltransferase family protein 0.9928 244 393 GO:0003988
GO:0006635
GO:0010124
GO:0017000
AF-A0A1F7L7J7-F1-model_v4 Thiolase C-terminal domain-containing protein 0.9926 283 394 GO:0003988
GO:0006635
GO:0010124
AF-A0A1K0JGL2-F1-model_v4 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.9889 261 394 GO:0003988
GO:0006635
GO:0010124
AF-A0A015KAP5-F1-model_v4 Acetyl-CoA C-acyltransferase 0.9855 263 394 GO:0003988
GO:0005777
GO:0006635
GO:0010124
GO:0016020
AF-A0A7Y8E982-F1-model_v4 Acetyl-CoA C-acyltransferase 0.9851 272 393 GO:0003988
GO:0006635
GO:0010124

Map