F191277

General Info

Members Datasets Scaffolds Average Seq Length
144 108 288 193

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10014304|Ga0081455_100143042
Length 227
Sequence MPYSQPARTTTRRIRIRGTRVAGLLVVIAAIAAALGYQSLASSSSTAASPIDGLHREHRAPAEADGALRLRSERRGALGEADGAVPDGTTVFDDEIPGVANLDPALLGALRRAASDAAGDGVEFVVDSGWRSPAYQERLLHEAVSEYGSEQEAARWVATPNTSAHVSGDAVDLGSAATAWLSERGAAYGLCQIYGNEPWHYELRPEASDHGCPPVYADPTHDPRMQQ

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
71 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
76 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
77 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
78 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
79 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
83 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
97 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
100 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
103 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
104 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
108 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.92
Metatranscriptomes 0.69
Isolates 1.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.86
Nodule 0
Rhizoplane 16.67
Rhizosphere 75.69
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10014304 3300005937 Bacteria 7786
2 JGI24740J21852_10019736 3300001979 Bacteria 2368
3 JGI24737J22298_10005928 3300001990 Bacteria 4202
4 rootL2_10226542 3300003322 Bacteria 1318
5 Ga0070676_10434472 3300005328 Bacteria 920
6 Ga0070670_100000747 3300005331 Bacteria 25245
7 Ga0070670_100563565 3300005331 Bacteria 1017
8 Ga0070680_100234067 3300005336 Bacteria 1552
9 Ga0068868_100009175 3300005338 Bacteria 7105
10 Ga0070674_100119945 3300005356 Bacteria 1946
11 Ga0070674_100140527 3300005356 Bacteria 1812
12 Ga0070667_100116653 3300005367 Bacteria 2319
13 Ga0070700_100200165 3300005441 Bacteria 1402
14 Ga0070662_100216990 3300005457 Bacteria 1525
15 Ga0068853_100059151 3300005539 Bacteria 3310
16 Ga0070672_100005086 3300005543 Bacteria 8677
17 Ga0070695_100206370 3300005545 Bacteria 1407
18 Ga0068855_100142040 3300005563 Bacteria 2735
19 Ga0068857_100157010 3300005577 Bacteria 2063
20 Ga0068854_100002294 3300005578 Bacteria 11775
21 Ga0068856_100708567 3300005614 Bacteria 1027
22 Ga0068864_100521005 3300005618 Bacteria 1146
23 Ga0068870_10012389 3300005840 Bacteria 3985
24 Ga0081455_10046834 3300005937 Bacteria 3748
25 Ga0081539_10094273 3300005985 Bacteria 1540
26 Ga0075365_10881667 3300006038 Bacteria 631
27 Ga0075363_100012359 3300006048 Bacteria 4114
28 Ga0075366_10315768 3300006195 Bacteria 957
29 Ga0075428_100183562 3300006844 Bacteria 2264
30 Ga0075430_100010161 3300006846 Bacteria 7969
31 Ga0075431_100085626 3300006847 Bacteria 3253
32 Ga0075434_100295802 3300006871 Bacteria 1639
33 Ga0068865_100034997 3300006881 Bacteria 3374
34 Ga0111539_12780630 3300009094 Bacteria 567
35 Ga0105245_10667624 3300009098 Bacteria 1071
36 Ga0105245_10683581 3300009098 Bacteria 1058
37 Ga0105245_11160985 3300009098 Bacteria 819
38 Ga0114129_10024270 3300009147 Bacteria 8590
39 Ga0114129_10153525 3300009147 Bacteria 3150
40 Ga0114129_10573507 3300009147 Bacteria 1465
41 Ga0105243_10033739 3300009148 Bacteria 3958
42 Ga0105243_10573083 3300009148 Bacteria 1082
43 Ga0105241_10633139 3300009174 Bacteria 970
44 Ga0105242_10016923 3300009176 Bacteria 5674
45 Ga0105242_10132891 3300009176 Bacteria 2150
46 Ga0105238_10233983 3300009551 Bacteria 1814
47 Ga0105239_10137460 3300010375 Bacteria 2721
48 Ga0105239_11509581 3300010375 Bacteria 776
49 Ga0105246_10117094 3300011119 Bacteria 1968
50 Ga0105246_10564457 3300011119 Bacteria 977
51 Ga0157371_10102262 3300013102 Bacteria 2033
52 Ga0157372_10979267 3300013307 Bacteria 980
53 Ga0157372_11330286 3300013307 Bacteria 829
54 Ga0157377_10139173 3300014745 Bacteria 1490
55 Ga0157379_10000516 3300014968 Bacteria 31318
56 Ga0206353_10241654 3300020082 Bacteria 818
57 Ga0207688_10004375 3300025901 Bacteria 7693
58 Ga0207643_10001214 3300025908 Bacteria 15220
59 Ga0207660_10467647 3300025917 Bacteria 1021
60 Ga0207657_10048325 3300025919 Bacteria 3715
61 Ga0207650_10162337 3300025925 Bacteria 1771
62 Ga0207650_10583264 3300025925 Bacteria 939
63 Ga0207690_10113211 3300025932 Bacteria 1958
64 Ga0207709_10585283 3300025935 Bacteria 882
65 Ga0207704_10171555 3300025938 Bacteria 1556
66 Ga0207661_10090680 3300025944 Bacteria 2545
67 Ga0207661_10310604 3300025944 Bacteria 1415
68 Ga0207661_11059764 3300025944 Bacteria 747
69 Ga0207651_10043325 3300025960 Bacteria 3003
70 Ga0207640_10020184 3300025981 Bacteria 3953
71 Ga0207658_10121817 3300025986 Bacteria 2081
72 Ga0207678_10040490 3300026067 Bacteria 4041
73 Ga0207678_10160267 3300026067 Bacteria 1921
74 Ga0207708_10118000 3300026075 Bacteria 2065
75 Ga0207674_10147645 3300026116 Bacteria 2309
76 Ga0207675_100595113 3300026118 Bacteria 1108
77 Ga0207683_10244480 3300026121 Bacteria 1637
78 Ga0307515_10031181 3300028794 Bacteria 8901
79 Ga0307406_10086926 3300031901 Bacteria 2095
80 Ga0307416_100181475 3300032002 Bacteria 1973
81 Ga0307416_100730215 3300032002 Bacteria 1082
82 Ga0307411_11402866 3300032005 Bacteria 639
83 Ga0395899_0027752 3300037312 Bacteria 4265
84 Ga0395900_0148296 3300037418 Bacteria 2398
85 Ga0395898_0082815 3300037466 Bacteria 3092
86 Ga0395901_0033629 3300038443 Bacteria 5294
87 Ga0395901_0036330 3300038443 Bacteria 5091
88 Ga0395901_0889484 3300038443 Bacteria 873
89 Ga0439439_0079001 3300041406 Bacteria 888
90 Ga0451853_0475990 3300041512 Bacteria 966
91 Ga0466965_0040888 3300044683 Bacteria 2283
92 Ga0466957_0462913 3300044842 Bacteria 875
93 Ga0466967_0031564 3300045976 Bacteria 4461
94 Ga0466967_0324612 3300045976 Bacteria 1485
95 Ga0466967_0336128 3300045976 Bacteria 1460
96 Ga0495674_0439900 3300047319 Bacteria 1049
97 Ga0495672_0004851 3300047320 Bacteria 10836
98 Ga0495680_0304155 3300047322 Bacteria 1119
99 Ga0496100_0068766 3300048903 Bacteria 2356
100 Ga0496101_0042214 3300048904 Bacteria 3255
101 Ga0496102_0031314 3300048905 Bacteria 4771
102 Ga0496102_0152096 3300048905 Bacteria 2175
103 Ga0496104_0003303 3300048907 Bacteria 13922
104 Ga0496104_0010068 3300048907 Bacteria 8439
105 Ga0496104_0055100 3300048907 Bacteria 3759
106 Ga0496105_0005635 3300048908 Bacteria 9528
107 Ga0496105_0034918 3300048908 Bacteria 4137
108 Ga0496105_0067360 3300048908 Bacteria 2956
109 Ga0496108_0005939 3300048911 Bacteria 9889
110 Ga0496108_0009830 3300048911 Bacteria 7751
111 Ga0496108_0362972 3300048911 Bacteria 1264
112 Ga0496109_0003685 3300048912 Bacteria 12804
113 Ga0496109_0009280 3300048912 Bacteria 8381
114 Ga0496109_0034485 3300048912 Bacteria 4558
115 Ga0496110_0024438 3300048913 Bacteria 5149
116 Ga0496111_0016173 3300048914 Bacteria 5138
117 Ga0496112_0036996 3300048915 Bacteria 4763
118 Ga0496112_0045743 3300048915 Bacteria 4291
119 Ga0496113_0101336 3300048916 Bacteria 2232
120 Ga0496113_0390494 3300048916 Bacteria 1117
121 Ga0496113_1026700 3300048916 Bacteria 649
122 Ga0496114_0163430 3300048917 Bacteria 1937
123 Ga0501038_0270152 3300049574 Bacteria 1341
124 Ga0501046_0337754 3300049580 Bacteria 1095
125 Ga0501067_0229297 3300049583 Bacteria 1034
126 Ga0501074_0501736 3300049590 Bacteria 860
127 Ga0501079_0018815 3300049741 Bacteria 5279
128 Ga0501080_0093019 3300049742 Bacteria 2800
129 Ga0501045_0081212 3300049824 Bacteria 2390
130 nmdc:mga03n38_6476_c1 3300050490 Bacteria 4071
131 nmdc:mga0yw44_528617_c1 3300050492 Bacteria 801
132 nmdc:mga0k408_104554_c1 3300050493 Bacteria 1671
133 nmdc:mga06z11_6669_c1 3300050494 Bacteria 4719
134 nmdc:mga05p37_10123_c2 3300050507 Bacteria 9095
135 nmdc:mga05p37_21595_c1 3300050507 Bacteria 7799
136 nmdc:mga05p37_247733_c1 3300050507 Bacteria 2138
137 nmdc:mga0qj67_5632_c1 3300050509 Bacteria 9160
138 nmdc:mga06r32_56605_c1 3300050510 Bacteria 3765
139 nmdc:mga0n895_1054442_c1 3300050512 Bacteria 792
140 nmdc:mga0n895_395710_c1 3300050512 Bacteria 1397
141 nmdc:mga0a205_196306_c1 3300050515 Bacteria 1909
142 Ga0501084_0000257 3300054114 Bacteria 40244
143 2552112913 2551306166 Bacteria 9731570
144 8055070944 8055066027 Bacteria 9479577
145 Ga0081455_10014304
146 JGI24740J21852_10019736
147 JGI24737J22298_10005928
148 rootL2_10226542
149 Ga0070676_10434472
150 Ga0070670_100000747
151 Ga0070670_100563565
152 Ga0070680_100234067
153 Ga0068868_100009175
154 Ga0070674_100119945
155 Ga0070674_100140527
156 Ga0070667_100116653
157 Ga0070700_100200165
158 Ga0070662_100216990
159 Ga0068853_100059151
160 Ga0070672_100005086
161 Ga0070695_100206370
162 Ga0068855_100142040
163 Ga0068857_100157010
164 Ga0068854_100002294
165 Ga0068856_100708567
166 Ga0068864_100521005
167 Ga0068870_10012389
168 Ga0081455_10046834
169 Ga0081539_10094273
170 Ga0075365_10881667
171 Ga0075363_100012359
172 Ga0075366_10315768
173 Ga0075428_100183562
174 Ga0075430_100010161
175 Ga0075431_100085626
176 Ga0075434_100295802
177 Ga0068865_100034997
178 Ga0111539_12780630
179 Ga0105245_10667624
180 Ga0105245_10683581
181 Ga0105245_11160985
182 Ga0114129_10024270
183 Ga0114129_10153525
184 Ga0114129_10573507
185 Ga0105243_10033739
186 Ga0105243_10573083
187 Ga0105241_10633139
188 Ga0105242_10016923
189 Ga0105242_10132891
190 Ga0105238_10233983
191 Ga0105239_10137460
192 Ga0105239_11509581
193 Ga0105246_10117094
194 Ga0105246_10564457
195 Ga0157371_10102262
196 Ga0157372_10979267
197 Ga0157372_11330286
198 Ga0157377_10139173
199 Ga0157379_10000516
200 Ga0206353_10241654
201 Ga0207688_10004375
202 Ga0207643_10001214
203 Ga0207660_10467647
204 Ga0207657_10048325
205 Ga0207650_10162337
206 Ga0207650_10583264
207 Ga0207690_10113211
208 Ga0207709_10585283
209 Ga0207704_10171555
210 Ga0207661_10090680
211 Ga0207661_10310604
212 Ga0207661_11059764
213 Ga0207651_10043325
214 Ga0207640_10020184
215 Ga0207658_10121817
216 Ga0207678_10040490
217 Ga0207678_10160267
218 Ga0207708_10118000
219 Ga0207674_10147645
220 Ga0207675_100595113
221 Ga0207683_10244480
222 Ga0307515_10031181
223 Ga0307406_10086926
224 Ga0307416_100181475
225 Ga0307416_100730215
226 Ga0307411_11402866
227 Ga0395899_0027752
228 Ga0395900_0148296
229 Ga0395898_0082815
230 Ga0395901_0033629
231 Ga0395901_0036330
232 Ga0395901_0889484
233 Ga0439439_0079001
234 Ga0451853_0475990
235 Ga0466965_0040888
236 Ga0466957_0462913
237 Ga0466967_0031564
238 Ga0466967_0324612
239 Ga0466967_0336128
240 Ga0495674_0439900
241 Ga0495672_0004851
242 Ga0495680_0304155
243 Ga0496100_0068766
244 Ga0496101_0042214
245 Ga0496102_0031314
246 Ga0496102_0152096
247 Ga0496104_0003303
248 Ga0496104_0010068
249 Ga0496104_0055100
250 Ga0496105_0005635
251 Ga0496105_0034918
252 Ga0496105_0067360
253 Ga0496108_0005939
254 Ga0496108_0009830
255 Ga0496108_0362972
256 Ga0496109_0003685
257 Ga0496109_0009280
258 Ga0496109_0034485
259 Ga0496110_0024438
260 Ga0496111_0016173
261 Ga0496112_0036996
262 Ga0496112_0045743
263 Ga0496113_0101336
264 Ga0496113_0390494
265 Ga0496113_1026700
266 Ga0496114_0163430
267 Ga0501038_0270152
268 Ga0501046_0337754
269 Ga0501067_0229297
270 Ga0501074_0501736
271 Ga0501079_0018815
272 Ga0501080_0093019
273 Ga0501045_0081212
274 nmdc:mga03n38_6476_c1
275 nmdc:mga0yw44_528617_c1
276 nmdc:mga0k408_104554_c1
277 nmdc:mga06z11_6669_c1
278 nmdc:mga05p37_10123_c2
279 nmdc:mga05p37_21595_c1
280 nmdc:mga05p37_247733_c1
281 nmdc:mga0qj67_5632_c1
282 nmdc:mga06r32_56605_c1
283 nmdc:mga0n895_1054442_c1
284 nmdc:mga0n895_395710_c1
285 nmdc:mga0a205_196306_c1
286 Ga0501084_0000257
287 2552112913
288 8055070944

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02557

VanY

D-alanyl-D-alanine carboxypeptidase

100

206

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hnm-assembly3.cif.gz_C crystal structure of vancomycin resistance d,d-pentapeptidase vany e175a mutant from vanb-type resistance cassette in complex with zn(ii) 0.9255 71 173
5zhw-assembly2.cif.gz_B vanyb in complex with d-alanine-d-alanine 0.9047 71 181
4oak-assembly1.cif.gz_A crystal structure of vancomycin resistance d,d-dipeptidase/d,d-pentapeptidase vanxyc d59s mutant in complex with d-alanine-d-alanine and copper (ii) 0.838 71 177
4ox3-assembly1.cif.gz_A structure of the ldcb ld-carboxypeptidase reveals the molecular basis of peptidoglycan recognition 0.8316 71 177
4oxd-assembly1.cif.gz_A structure of the ldcb ld-carboxypeptidase reveals the molecular basis of peptidoglycan recognition 0.83 71 177
ID Description Score Start End Superfamily
5hnmD00 Alpha Beta;2-Layer Sandwich;Muramoyl-pentapeptide Carboxypeptidase; domain 2; 0.9156 71 180 3.30.1380.10
4murB00 Alpha Beta;2-Layer Sandwich;Muramoyl-pentapeptide Carboxypeptidase; domain 2; 0.8426 71 177 3.30.1380.10
4ox3A00 Alpha Beta;2-Layer Sandwich;Muramoyl-pentapeptide Carboxypeptidase; domain 2; 0.8316 71 177 3.30.1380.10
af_P77790_4_176_3.30.1380.10 Alpha Beta;2-Layer Sandwich;Muramoyl-pentapeptide Carboxypeptidase; domain 2; 0.7548 71 177 3.30.1380.10
4f78A02 Alpha Beta;2-Layer Sandwich;Muramoyl-pentapeptide Carboxypeptidase; domain 2; 0.7531 54 173 3.30.1380.10
ID Description Score Start End GO Terms
AF-F4GZ31-F1-model_v4 Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 1.001 48 197 GO:0004180
GO:0006508
AF-A0A561STP6-F1-model_v4 D-alanyl-D-alanine carboxypeptidase-like protein 0.9998 58 197 GO:0004180
GO:0006508
AF-A0A495XLT0-F1-model_v4 D-alanyl-D-alanine carboxypeptidase-like protein 0.9935 48 196 GO:0004180
GO:0006508
AF-A0A839XX47-F1-model_v4 Peptidase M15B domain-containing protein 0.9934 49 196 GO:0006508
GO:0008233
AF-A0A561STP6-F1-model_v4 D-alanyl-D-alanine carboxypeptidase-like protein 0.9927 58 197 GO:0004180
GO:0006508

Map