F188097

General Info

Members Datasets Scaffolds Average Seq Length
143 103 286 626

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100125129|Ga0070707_1001251292
Length 641
Sequence MCGICGIYHYASDEPVSETTLRRMTSVIAHRGPDDDGFYRTERVGLGHRRLSIIDVAGGHQPIFNEDGTVAIIFNGEIYNYRELAALVEGRGHQLRTRSDTETIVHLYEEFGEACVEMLRGMFAFALWDGRRRIMLLARDRLGKKPLYYADHAGRFVFGSELKSILEDPGIPQALDAEALADYFSFQYIPAPKSIFRHARKLRPAHYLVVNSHGVREQEYWDLDFSQTEERSEQEWRELLLDAYREAVGLRLMSEVPLGAFLSSGVDSSSVVALMSEITRRPVVTASIGFTAEKYSEAEDARRFAQSLGADHHERIVAPDAVAVAEKLAWHYDEPFADSSAVPTYYVSQVAREFVTVALSGDGGDENFAGYRRYRFDAAENRVRALVPAALRRSLFGTLAAVYPKADWLPQPLRAKATLRNLSLDPAQGYFNSVYGAMANERSGLMGGDFTAQLDGYNPFDHFRYYFDRARTRDPLSRVQYVDIKTYLTDDILAKVDRASMAVSLEVRCPLLDHRLMELAARMPSHLKLRGQEGKYIFKRAVGRLLPAEILARRKQGFVIPLAEWFRGELREVAESALFDREAQDELLNRATIAQIWQQHQSGRRDYGRPLWAIFMFRMWQRNFSAARPPSADVSAQPERS

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
59 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
79 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
80 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
81 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
82 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
83 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
84 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
85 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
88 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
102 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
103 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.6
Metatranscriptomes 1.4
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.6
Stem 0
Stem Tuber 0
Unclassified 8.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100125129 3300005468 Bacteria 2497
2 Ga0058862_10104198 3300004803 Bacteria 6230
3 Ga0065712_10072072 3300005290 Bacteria 4918
4 Ga0070680_100008434 3300005336 Bacteria 7891
5 Ga0068868_100035572 3300005338 Bacteria 3851
6 Ga0070703_10003742 3300005406 Bacteria 4303
7 Ga0070709_10023631 3300005434 Bacteria 3613
8 Ga0070694_100010832 3300005444 Bacteria 5641
9 Ga0070708_100000476 3300005445 Bacteria 30340
10 Ga0070706_100000590 3300005467 Bacteria 42069
11 Ga0070707_100000138 3300005468 Bacteria 68485
12 Ga0070707_100000175 3300005468 Bacteria 62727
13 Ga0070679_100011095 3300005530 Bacteria 8574
14 Ga0070679_100031865 3300005530 Bacteria 5212
15 Ga0070697_100000061 3300005536 Bacteria 85209
16 Ga0070695_100000055 3300005545 Bacteria 45989
17 Ga0070696_100000270 3300005546 Bacteria 31101
18 Ga0070693_100000026 3300005547 Bacteria 57942
19 Ga0070704_100000281 3300005549 Bacteria 22411
20 Ga0068864_100028003 3300005618 Bacteria 4762
21 Ga0068858_100047475 3300005842 Bacteria 3980
22 Ga0081455_10006942 3300005937 Bacteria 12038
23 Ga0081540_1006337 3300005983 Bacteria 8643
24 Ga0081539_10000232 3300005985 Bacteria 131067
25 Ga0081539_10000892 3300005985 Bacteria 57085
26 Ga0081539_10009702 3300005985 Bacteria 7971
27 Ga0097621_100101413 3300006237 Bacteria 2422
28 Ga0075434_100108663 3300006871 Bacteria 2784
29 Ga0068865_100069920 3300006881 Bacteria 2486
30 Ga0075436_100001450 3300006914 Bacteria 16112
31 Ga0075436_100010107 3300006914 Bacteria 6459
32 Ga0075436_100013826 3300006914 Bacteria 5527
33 Ga0075436_100052107 3300006914 Bacteria 2824
34 Ga0075435_100134608 3300007076 Bacteria 2069
35 Ga0099794_10000644 3300007265 Bacteria 11632
36 Ga0099794_10006201 3300007265 Bacteria 4828
37 Ga0105240_10007248 3300009093 Bacteria 16145
38 Ga0105240_10127456 3300009093 Bacteria 3057
39 Ga0105245_10000339 3300009098 Bacteria 44160
40 Ga0105245_10000799 3300009098 Bacteria 28575
41 Ga0105245_10061179 3300009098 Bacteria 3393
42 Ga0105247_10007791 3300009101 Bacteria 6552
43 Ga0114129_10015247 3300009147 Bacteria 10938
44 Ga0114129_10082982 3300009147 Unclassified 4453
45 Ga0105242_10005725 3300009176 Bacteria 9581
46 Ga0105242_10012338 3300009176 Bacteria 6575
47 Ga0105248_10000201 3300009177 Bacteria 69110
48 Ga0105248_10025594 3300009177 Bacteria 6562
49 Ga0105248_10065541 3300009177 Bacteria 4078
50 Ga0105248_10181103 3300009177 Bacteria 2374
51 Ga0105248_10201871 3300009177 Bacteria 2240
52 Ga0105238_10000568 3300009551 Bacteria 38752
53 Ga0105249_10001618 3300009553 Bacteria 19727
54 Ga0105249_10014336 3300009553 Bacteria 7009
55 Ga0105246_10029027 3300011119 Unclassified 3638
56 Ga0105246_10068074 3300011119 Bacteria 2496
57 Ga0157373_10072247 3300013100 Bacteria 2435
58 Ga0157369_10056604 3300013105 Unclassified 4231
59 Ga0157369_10141070 3300013105 Bacteria 2550
60 Ga0157378_10032407 3300013297 Unclassified 4618
61 Ga0163162_10033908 3300013306 Bacteria 5077
62 Ga0157372_10078359 3300013307 Unclassified 3734
63 Ga0157375_10002883 3300013308 Bacteria 14915
64 Ga0157375_10122523 3300013308 Bacteria 2712
65 Ga0163163_10081256 3300014325 Bacteria 3242
66 Ga0157376_10014165 3300014969 Bacteria 5974
67 Ga0182007_10013354 3300015262 Bacteria 3133
68 Ga0207653_10004622 3300025885 Bacteria 4314
69 Ga0207707_10110261 3300025912 Bacteria 2405
70 Ga0207663_10024055 3300025916 Bacteria 3505
71 Ga0207663_10065794 3300025916 Bacteria 2318
72 Ga0207652_10014382 3300025921 Bacteria 6411
73 Ga0207646_10000084 3300025922 Bacteria 125911
74 Ga0207646_10002947 3300025922 Bacteria 19727
75 Ga0207646_10111690 3300025922 Bacteria 2453
76 Ga0207694_10002014 3300025924 Bacteria 16825
77 Ga0207687_10000102 3300025927 Bacteria 62098
78 Ga0207687_10001752 3300025927 Bacteria 14922
79 Ga0207686_10003960 3300025934 Bacteria 7945
80 Ga0207686_10057499 3300025934 Bacteria 2448
81 Ga0207711_10000175 3300025941 Bacteria 69179
82 Ga0207711_10082269 3300025941 Bacteria 2814
83 Ga0207711_10111973 3300025941 Bacteria 2428
84 Ga0207712_10001033 3300025961 Bacteria 19728
85 Ga0207703_10089737 3300026035 Unclassified 2582
86 Ga0209588_1005697 3300027671 Bacteria 3581
87 Ga0265354_1000075 3300028016 Bacteria 16656
88 Ga0265357_1000086 3300028023 Bacteria 3455
89 Ga0268266_10056436 3300028379 Bacteria 3379
90 Ga0265760_10003215 3300031090 Unclassified 4784
91 Ga0373937_0117202 3300036401 Bacteria 2481
92 Ga0373937_0186369 3300036401 Bacteria 1949
93 Ga0373925_0054408 3300037068 Bacteria 2994
94 Ga0395898_0031168 3300037466 Bacteria 5331
95 Ga0400483_157367 3300039062 Unclassified 3123
96 Ga0436365_0382870 3300039437 Bacteria 3318
97 Ga0451577_0005714 3300042876 Bacteria 12621
98 Ga0451577_0011760 3300042876 Bacteria 8260
99 Ga0453683_0007015 3300044673 Bacteria 7677
100 Ga0453684_0002360 3300044712 Bacteria 46149
101 Ga0453684_0010570 3300044712 Bacteria 15755
102 Ga0451576_0005220 3300045051 Bacteria 16407
103 Ga0495592_0041380 3300046454 Bacteria 3454
104 Ga0495651_0003104 3300046462 Bacteria 12824
105 Ga0495582_0001508 3300046473 Bacteria 13131
106 Ga0495664_0001655 3300046477 Bacteria 11838
107 Ga0495618_0021541 3300046514 Bacteria 3975
108 Ga0495628_0010595 3300046516 Bacteria 7824
109 Ga0495630_0020537 3300046517 Bacteria 4870
110 Ga0495652_0007705 3300046529 Bacteria 9918
111 Ga0495640_0013595 3300046533 Bacteria 6188
112 Ga0495587_0023296 3300046536 Bacteria 3805
113 Ga0495645_0003178 3300046543 Bacteria 11135
114 Ga0495667_0005345 3300046559 Bacteria 8677
115 Ga0495634_0030425 3300046642 Bacteria 3728
116 Ga0495635_0008536 3300046663 Bacteria 7156
117 Ga0495659_0000792 3300046664 Bacteria 11331
118 Ga0495599_0005160 3300046678 Bacteria 7783
119 Ga0495623_0002577 3300046679 Bacteria 11980
120 Ga0495623_0049238 3300046679 Bacteria 2671
121 Ga0495646_0035525 3300046680 Bacteria 3091
122 Ga0495658_0000916 3300046683 Bacteria 15755
123 Ga0495613_0047163 3300046689 Unclassified 3183
124 Ga0495600_0000909 3300046809 Bacteria 15879
125 Ga0495604_0002501 3300047317 Bacteria 14678
126 Ga0495674_0003700 3300047319 Bacteria 14867
127 Ga0495674_0008933 3300047319 Bacteria 9528
128 Ga0495680_0003436 3300047322 Bacteria 15635
129 Ga0495675_0012278 3300047444 Bacteria 5391
130 Ga0495684_0001529 3300047471 Bacteria 18536
131 Ga0495684_0005778 3300047471 Bacteria 9625
132 Ga0495602_0023965 3300048088 Bacteria 5932
133 nmdc:mga05p37_19223_c1 3300050507 Bacteria 8264
134 nmdc:mga05p37_92846_c1 3300050507 Unclassified 3719
135 nmdc:mga06r32_183861_c1 3300050510 Bacteria 2076
136 nmdc:mga06r32_71652_c1 3300050510 Unclassified 3353
137 nmdc:mga06r32_99791_c1 3300050510 Bacteria 2848
138 nmdc:mga0n895_36703_c1 3300050512 Unclassified 4734
139 nmdc:mga0rr50_87523_c1 3300050513 Bacteria 2418
140 nmdc:mga08x19_2333_c1 3300050514 Bacteria 11515
141 nmdc:mga08x19_29284_c1 3300050514 Bacteria 3453
142 nmdc:mga08x19_50277_c1 3300050514 Bacteria 2675
143 nmdc:mga0a205_54606_c1 3300050515 Bacteria 3857
144 Ga0070707_100125129
145 Ga0058862_10104198
146 Ga0065712_10072072
147 Ga0070680_100008434
148 Ga0068868_100035572
149 Ga0070703_10003742
150 Ga0070709_10023631
151 Ga0070694_100010832
152 Ga0070708_100000476
153 Ga0070706_100000590
154 Ga0070707_100000138
155 Ga0070707_100000175
156 Ga0070679_100011095
157 Ga0070679_100031865
158 Ga0070697_100000061
159 Ga0070695_100000055
160 Ga0070696_100000270
161 Ga0070693_100000026
162 Ga0070704_100000281
163 Ga0068864_100028003
164 Ga0068858_100047475
165 Ga0081455_10006942
166 Ga0081540_1006337
167 Ga0081539_10000232
168 Ga0081539_10000892
169 Ga0081539_10009702
170 Ga0097621_100101413
171 Ga0075434_100108663
172 Ga0068865_100069920
173 Ga0075436_100001450
174 Ga0075436_100010107
175 Ga0075436_100013826
176 Ga0075436_100052107
177 Ga0075435_100134608
178 Ga0099794_10000644
179 Ga0099794_10006201
180 Ga0105240_10007248
181 Ga0105240_10127456
182 Ga0105245_10000339
183 Ga0105245_10000799
184 Ga0105245_10061179
185 Ga0105247_10007791
186 Ga0114129_10015247
187 Ga0114129_10082982
188 Ga0105242_10005725
189 Ga0105242_10012338
190 Ga0105248_10000201
191 Ga0105248_10025594
192 Ga0105248_10065541
193 Ga0105248_10181103
194 Ga0105248_10201871
195 Ga0105238_10000568
196 Ga0105249_10001618
197 Ga0105249_10014336
198 Ga0105246_10029027
199 Ga0105246_10068074
200 Ga0157373_10072247
201 Ga0157369_10056604
202 Ga0157369_10141070
203 Ga0157378_10032407
204 Ga0163162_10033908
205 Ga0157372_10078359
206 Ga0157375_10002883
207 Ga0157375_10122523
208 Ga0163163_10081256
209 Ga0157376_10014165
210 Ga0182007_10013354
211 Ga0207653_10004622
212 Ga0207707_10110261
213 Ga0207663_10024055
214 Ga0207663_10065794
215 Ga0207652_10014382
216 Ga0207646_10000084
217 Ga0207646_10002947
218 Ga0207646_10111690
219 Ga0207694_10002014
220 Ga0207687_10000102
221 Ga0207687_10001752
222 Ga0207686_10003960
223 Ga0207686_10057499
224 Ga0207711_10000175
225 Ga0207711_10082269
226 Ga0207711_10111973
227 Ga0207712_10001033
228 Ga0207703_10089737
229 Ga0209588_1005697
230 Ga0265354_1000075
231 Ga0265357_1000086
232 Ga0268266_10056436
233 Ga0265760_10003215
234 Ga0373937_0117202
235 Ga0373937_0186369
236 Ga0373925_0054408
237 Ga0395898_0031168
238 Ga0400483_157367
239 Ga0436365_0382870
240 Ga0451577_0005714
241 Ga0451577_0011760
242 Ga0453683_0007015
243 Ga0453684_0002360
244 Ga0453684_0010570
245 Ga0451576_0005220
246 Ga0495592_0041380
247 Ga0495651_0003104
248 Ga0495582_0001508
249 Ga0495664_0001655
250 Ga0495618_0021541
251 Ga0495628_0010595
252 Ga0495630_0020537
253 Ga0495652_0007705
254 Ga0495640_0013595
255 Ga0495587_0023296
256 Ga0495645_0003178
257 Ga0495667_0005345
258 Ga0495634_0030425
259 Ga0495635_0008536
260 Ga0495659_0000792
261 Ga0495599_0005160
262 Ga0495623_0002577
263 Ga0495623_0049238
264 Ga0495646_0035525
265 Ga0495658_0000916
266 Ga0495613_0047163
267 Ga0495600_0000909
268 Ga0495604_0002501
269 Ga0495674_0003700
270 Ga0495674_0008933
271 Ga0495680_0003436
272 Ga0495675_0012278
273 Ga0495684_0001529
274 Ga0495684_0005778
275 Ga0495602_0023965
276 nmdc:mga05p37_19223_c1
277 nmdc:mga05p37_92846_c1
278 nmdc:mga06r32_183861_c1
279 nmdc:mga06r32_71652_c1
280 nmdc:mga06r32_99791_c1
281 nmdc:mga0n895_36703_c1
282 nmdc:mga0rr50_87523_c1
283 nmdc:mga08x19_2333_c1
284 nmdc:mga08x19_29284_c1
285 nmdc:mga08x19_50277_c1
286 nmdc:mga0a205_54606_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13522

GATase_6

Glutamine amidotransferase domain

33

161

0.98

PF13537

GATase_7

Glutamine amidotransferase domain

48

167

0.98

PF00733

Asn_synthase

Asparagine synthase

239

622

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ct9-assembly2.cif.gz_C crystal structure of asparagine synthetase b from escherichia coli 0.8436 2 614
1ct9-assembly2.cif.gz_C crystal structure of asparagine synthetase b from escherichia coli 0.8178 2 614
7ylz-assembly1.cif.gz_A unliganded form of hydroxyamidotransferase tsnb9 0.8119 10 611
7ylz-assembly2.cif.gz_B unliganded form of hydroxyamidotransferase tsnb9 0.8111 10 611
1ct9-assembly1.cif.gz_D crystal structure of asparagine synthetase b from escherichia coli 0.803 2 614
ID Description Score Start End Superfamily
af_Q86A01_14_228_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.925 9 202 3.60.20.10
af_P49090_1_193_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9003 14 213 3.60.20.10
af_Q58456_3_201_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.8938 8 174 3.60.20.10
af_Q7KTW9_18_204_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.885 12 209 3.60.20.10
af_Q58516_3_191_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.8808 6 158 3.60.20.10
ID Description Score Start End GO Terms
AF-A0A2V6THV8-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9703 297 613 GO:0004066
GO:0005829
GO:0006529
AF-A0A3B0SUI9-F1-model_v4 Asparagine synthetase [glutamine-hydrolyzing] AsnH (EC 6.3.5.4) 0.9692 5 612 GO:0004066
GO:0005524
GO:0005829
GO:0006529
AF-A0A1E3Y7A7-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9641 2 611 GO:0004066
GO:0005524
GO:0005829
GO:0006529
AF-A0A7V9BK19-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.964 5 213 GO:0005829
AF-A0A3C1WMX6-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.963 36 174 GO:0005829

Map