F187483

General Info

Members Datasets Scaffolds Average Seq Length
143 102 144 97

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10138485|rootH1_101384851
Length 111
Sequence VVALLLLFWYSYTNMVDLTRDDVLKLARLARLTITDEEVEKYRTELSEILKYVEQLKNVDVTGLEPTTQVTGLKNVMREDKVVDYGVTPDDLLRGAPQKEDRLIKVKRMIA

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
67 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
72 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
73 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
74 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
75 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
78 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
79 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
80 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
84 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
85 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
86 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
87 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
90 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
91 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
92 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
93 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
94 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
95 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
96 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
97 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
98 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
99 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
100 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
101 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
102 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.67
Nodule 0
Rhizoplane 2.1
Rhizosphere 66.43
Stem 0
Stem Tuber 0
Unclassified 2.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10095771 3300001979 Bacteria 761
2 rootH1_10025986 3300003316 Unclassified 2287
3 rootH1_10138485 3300003316 Bacteria 4001
4 rootH1_10138485 3300003323 Unclassified 2664
5 rootL2_10061467 3300003322 Bacteria 1835
6 rootL2_10083314 3300003322 Bacteria 7698
7 Ga0070658_11687652 3300005327 Unclassified 548
8 Ga0070676_10007438 3300005328 Bacteria 5881
9 Ga0070683_100000140 3300005329 Bacteria 46747
10 Ga0070683_100521595 3300005329 Bacteria 1135
11 Ga0070683_100995599 3300005329 Bacteria 805
12 Ga0070690_100000285 3300005330 Bacteria 25922
13 Ga0068869_100709696 3300005334 Unclassified 858
14 Ga0070680_100122401 3300005336 Bacteria 2172
15 Ga0070682_101386639 3300005337 Unclassified 600
16 Ga0070689_101433873 3300005340 Unclassified 624
17 Ga0070687_100100365 3300005343 Bacteria 1619
18 Ga0070700_100122394 3300005441 Unclassified 1745
19 Ga0070663_100593931 3300005455 Bacteria 930
20 Ga0070678_100017389 3300005456 Bacteria 4629
21 Ga0070684_100001211 3300005535 Bacteria 18536
22 Ga0070684_100210224 3300005535 Bacteria 1773
23 Ga0070684_101486797 3300005535 Unclassified 638
24 Ga0070686_100013524 3300005544 Bacteria 4677
25 Ga0070696_101670590 3300005546 Unclassified 548
26 Ga0070665_101609293 3300005548 Unclassified 657
27 Ga0068855_100021272 3300005563 Bacteria 7778
28 Ga0068857_100955595 3300005577 Bacteria 823
29 Ga0068857_100958047 3300005577 Unclassified 822
30 Ga0068856_100000001 3300005614 Bacteria 565602
31 Ga0068856_101235002 3300005614 Unclassified 763
32 Ga0068859_100760444 3300005617 Bacteria 1058
33 Ga0068859_101087048 3300005617 Bacteria 880
34 Ga0068862_101716251 3300005844 Unclassified 636
35 Ga0075365_10000020 3300006038 Bacteria 64494
36 Ga0075365_10818176 3300006038 Unclassified 657
37 Ga0075368_10000877 3300006042 Bacteria 9320
38 Ga0075363_100000016 3300006048 Bacteria 38279
39 Ga0075364_10001104 3300006051 Bacteria 14430
40 Ga0075364_10039757 3300006051 Bacteria 3050
41 Ga0075364_10951766 3300006051 Unclassified 584
42 Ga0075364_11187972 3300006051 Unclassified 517
43 Ga0075367_10009426 3300006178 Bacteria 5103
44 Ga0075367_10105708 3300006178 Bacteria 1724
45 Ga0075369_10148121 3300006186 Unclassified 1072
46 Ga0075366_10000044 3300006195 Bacteria 45021
47 Ga0097621_100000370 3300006237 Bacteria 31223
48 Ga0097621_100633899 3300006237 Unclassified 979
49 Ga0075370_10007056 3300006353 Bacteria 5700
50 Ga0075370_10042662 3300006353 Bacteria 2563
51 Ga0068871_100000156 3300006358 Bacteria 45103
52 Ga0097620_100760460 3300006931 Bacteria 1058
53 Ga0097620_101087010 3300006931 Bacteria 880
54 Ga0105245_10954589 3300009098 Bacteria 900
55 Ga0105245_11450377 3300009098 Unclassified 737
56 Ga0105243_10027623 3300009148 Bacteria 4349
57 Ga0105241_10000003 3300009174 Bacteria 839043
58 Ga0105241_10002716 3300009174 Bacteria 13249
59 Ga0105238_10324969 3300009551 Bacteria 1525
60 Ga0105238_10672581 3300009551 Bacteria 1046
61 Ga0105249_10003576 3300009553 Bacteria 13450
62 Ga0105033_119572 3300009986 Unclassified 614
63 Ga0157371_10000937 3300013102 Bacteria 32624
64 Ga0157369_10000261 3300013105 Bacteria 71207
65 Ga0157369_10081964 3300013105 Unclassified 3452
66 Ga0157369_12606628 3300013105 Unclassified 511
67 Ga0157374_10000031 3300013296 Bacteria 204840
68 Ga0157374_10002560 3300013296 Bacteria 15342
69 Ga0157374_10093081 3300013296 Bacteria 2877
70 Ga0157374_12414019 3300013296 Bacteria 553
71 Ga0157378_13243832 3300013297 Unclassified 505
72 Ga0157372_10000194 3300013307 Bacteria 66925
73 Ga0163163_10109441 3300014325 Bacteria 2790
74 Ga0157377_10618056 3300014745 Bacteria 775
75 Ga0207645_10001792 3300025907 Bacteria 17339
76 Ga0207654_10000002 3300025911 Bacteria 1460142
77 Ga0207654_10004434 3300025911 Bacteria 7082
78 Ga0207662_10839219 3300025918 Unclassified 649
79 Ga0207694_11091262 3300025924 Bacteria 675
80 Ga0207687_10000001 3300025927 Bacteria 1130810
81 Ga0207687_10809085 3300025927 Unclassified 799
82 Ga0207687_10922685 3300025927 Unclassified 747
83 Ga0207709_10014816 3300025935 Bacteria 4311
84 Ga0207670_11166659 3300025936 Unclassified 651
85 Ga0207689_10291925 3300025942 Unclassified 1351
86 Ga0207661_10000021 3300025944 Bacteria 205381
87 Ga0207661_10500611 3300025944 Unclassified 1110
88 Ga0207661_10551861 3300025944 Bacteria 1055
89 Ga0207667_10000008 3300025949 Bacteria 625138
90 Ga0207667_10223745 3300025949 Unclassified 1928
91 Ga0207712_10002267 3300025961 Bacteria 12484
92 Ga0207658_10022965 3300025986 Bacteria 4348
93 Ga0207678_10344032 3300026067 Bacteria 1285
94 Ga0207708_10165519 3300026075 Unclassified 1748
95 Ga0207702_10000001 3300026078 Bacteria 895738
96 Ga0207702_11227562 3300026078 Unclassified 744
97 Ga0207674_10826817 3300026116 Bacteria 894
98 Ga0207683_10016483 3300026121 Bacteria 6289
99 Ga0209813_10000004 3300027866 Bacteria 139340
100 Ga0265337_1000001 3300028556 Bacteria 140973
101 Ga0265338_10029039 3300028800 Bacteria 5496
102 Ga0395900_0507139 3300037418 Bacteria 1156
103 Ga0395901_0207363 3300038443 Bacteria 2052
104 Ga0451800_0975537 3300041459 Unclassified 917
105 Ga0451807_2214151 3300041486 Unclassified 692
106 Ga0495587_0257213 3300046536 Bacteria 981
107 Ga0495622_0000082 3300046557 Bacteria 85266
108 Ga0495634_0643266 3300046642 Bacteria 613
109 Ga0495658_0002154 3300046683 Bacteria 9967
110 Ga0495600_0007672 3300046809 Bacteria 6612
111 Ga0495681_0098884 3300047470 Bacteria 1278
112 Ga0495593_0160293 3300047673 Bacteria 1136
113 Ga0495602_0323661 3300048088 Bacteria 1121
114 Ga0495602_0780244 3300048088 Unclassified 643
115 Ga0496115_0429784 3300048918 Bacteria 1069
116 Ga0501046_0123233 3300049580 Bacteria 1971
117 Ga0501225_0350660 3300049705 Bacteria 511
118 Ga0501083_0088230 3300049744 Unclassified 2051
119 nmdc:mga03n38_22_c1 3300050490 Bacteria 38225
120 nmdc:mga00v17_19482_c1 3300050491 Bacteria 3874
121 nmdc:mga00v17_3576_c1 3300050491 Bacteria 8031
122 nmdc:mga00v17_610033_c1 3300050491 Bacteria 703
123 nmdc:mga0yw44_2_c1 3300050492 Bacteria 586884
124 nmdc:mga0yw44_50215_c1 3300050492 Bacteria 2521
125 nmdc:mga0yw44_637400_c1 3300050492 Unclassified 724
126 nmdc:mga0k408_114_c1 3300050493 Bacteria 39328
127 nmdc:mga06z11_108899_c1 3300050494 Bacteria 1531
128 nmdc:mga06z11_6_c1 3300050494 Bacteria 124054
129 nmdc:mga04h51_4_c1 3300050495 Bacteria 139342
130 nmdc:mga07m45_24272_c1 3300050496 Bacteria 2564
131 nmdc:mga07m45_4692_c1 3300050496 Bacteria 6709
132 nmdc:mga0sz30_174923_c1 3300050516 Bacteria 952
133 Ga0500610_0000001 3300053079 Bacteria 185468
134 Ga0500643_002381 3300053087 Bacteria 9797
135 Ga0500644_0000006 3300053088 Bacteria 143304
136 Ga0500644_0000651 3300053088 Bacteria 12870
137 Ga0500566_0000001 3300053094 Bacteria 1101031
138 Ga0500555_000001 3300053103 Bacteria 1353713
139 Ga0500555_000002 3300053103 Bacteria 1314346
140 Ga0500562_008017 3300053108 Bacteria 2666
141 Ga0500594_0000914 3300053118 Bacteria 6333
142 Ga0500628_000012 3300053129 Bacteria 106556
143 Ga0500652_000020 3300053131 Bacteria 119198
144 Ga0500559_0006658 3300053136 Bacteria 5195

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053103 Ga0500555_000001 Ga0500555_000001_693874_694167 90
2 3300013297 Ga0157378_13243832 Ga0157378_132438322 92
3 3300049705 Ga0501225_0350660 Ga0501225_0350660_67_438 96
4 3300001979 JGI24740J21852_10095771 JGI24740J21852_100957712 97
5 3300003316 rootH1_10025986 rootH1_100259862 97
6 3300003316 rootH1_10138485 rootH1_101384851 97
7 3300003322 rootL2_10061467 rootL2_100614673 97
8 3300003322 rootL2_10083314 rootL2_100833145 97
9 3300005327 Ga0070658_11687652 Ga0070658_116876522 97
10 3300005328 Ga0070676_10007438 Ga0070676_100074383 97
11 3300005329 Ga0070683_100000140 Ga0070683_1000001404 97
12 3300005329 Ga0070683_100521595 Ga0070683_1005215952 97
13 3300005329 Ga0070683_100995599 Ga0070683_1009955992 97
14 3300005330 Ga0070690_100000285 Ga0070690_1000002852 97
15 3300005334 Ga0068869_100709696 Ga0068869_1007096962 97
16 3300005336 Ga0070680_100122401 Ga0070680_1001224013 97
17 3300005337 Ga0070682_101386639 Ga0070682_1013866391 97
18 3300005340 Ga0070689_101433873 Ga0070689_1014338731 97
19 3300005343 Ga0070687_100100365 Ga0070687_1001003652 97
20 3300005441 Ga0070700_100122394 Ga0070700_1001223942 97
21 3300005455 Ga0070663_100593931 Ga0070663_1005939312 97
22 3300005456 Ga0070678_100017389 Ga0070678_1000173894 97
23 3300005535 Ga0070684_100001211 Ga0070684_10000121110 97
24 3300005535 Ga0070684_100210224 Ga0070684_1002102242 97
25 3300005535 Ga0070684_101486797 Ga0070684_1014867971 97
26 3300005544 Ga0070686_100013524 Ga0070686_1000135242 97
27 3300005546 Ga0070696_101670590 Ga0070696_1016705901 97
28 3300005548 Ga0070665_101609293 Ga0070665_1016092932 97
29 3300005563 Ga0068855_100021272 Ga0068855_1000212722 97
30 3300005577 Ga0068857_100955595 Ga0068857_1009555952 97
31 3300005577 Ga0068857_100958047 Ga0068857_1009580472 97
32 3300005614 Ga0068856_100000001 Ga0068856_100000001222 97
33 3300005614 Ga0068856_101235002 Ga0068856_1012350021 97
34 3300005617 Ga0068859_100760444 Ga0068859_1007604442 97
35 3300005617 Ga0068859_101087048 Ga0068859_1010870482 97
36 3300005844 Ga0068862_101716251 Ga0068862_1017162512 97
37 3300006038 Ga0075365_10000020 Ga0075365_100000202 97
38 3300006038 Ga0075365_10818176 Ga0075365_108181762 97
39 3300006042 Ga0075368_10000877 Ga0075368_100008776 97
40 3300006048 Ga0075363_100000016 Ga0075363_10000001644 97
41 3300006051 Ga0075364_10001104 Ga0075364_100011042 97
42 3300006051 Ga0075364_10039757 Ga0075364_100397572 97
43 3300006051 Ga0075364_10951766 Ga0075364_109517661 97
44 3300006051 Ga0075364_11187972 Ga0075364_111879721 97
45 3300006178 Ga0075367_10009426 Ga0075367_100094266 97
46 3300006178 Ga0075367_10105708 Ga0075367_101057082 97
47 3300006186 Ga0075369_10148121 Ga0075369_101481212 97
48 3300006195 Ga0075366_10000044 Ga0075366_1000004425 97
49 3300006237 Ga0097621_100000370 Ga0097621_10000037028 97
50 3300006237 Ga0097621_100633899 Ga0097621_1006338992 97
51 3300006353 Ga0075370_10007056 Ga0075370_100070568 97
52 3300006353 Ga0075370_10042662 Ga0075370_100426622 97
53 3300006358 Ga0068871_100000156 Ga0068871_10000015616 97
54 3300006931 Ga0097620_100760460 Ga0097620_1007604602 97
55 3300006931 Ga0097620_101087010 Ga0097620_1010870102 97
56 3300009098 Ga0105245_10954589 Ga0105245_109545892 97
57 3300009098 Ga0105245_11450377 Ga0105245_114503772 97
58 3300009148 Ga0105243_10027623 Ga0105243_100276232 97
59 3300009174 Ga0105241_10000003 Ga0105241_10000003228 97
60 3300009174 Ga0105241_10002716 Ga0105241_100027169 97
61 3300009551 Ga0105238_10324969 Ga0105238_103249692 97
62 3300009551 Ga0105238_10672581 Ga0105238_106725812 97
63 3300009553 Ga0105249_10003576 Ga0105249_100035764 97
64 3300009986 Ga0105033_119572 Ga0105033_1195721 97
65 3300013102 Ga0157371_10000937 Ga0157371_1000093725 97
66 3300013105 Ga0157369_10000261 Ga0157369_1000026173 97
67 3300013105 Ga0157369_10081964 Ga0157369_100819642 97
68 3300013105 Ga0157369_12606628 Ga0157369_126066281 97
69 3300013296 Ga0157374_10000031 Ga0157374_10000031180 97
70 3300013296 Ga0157374_10002560 Ga0157374_100025602 97
71 3300013296 Ga0157374_10093081 Ga0157374_100930813 97
72 3300013296 Ga0157374_12414019 Ga0157374_124140192 97
73 3300013307 Ga0157372_10000194 Ga0157372_1000019482 97
74 3300014325 Ga0163163_10109441 Ga0163163_101094412 97
75 3300014745 Ga0157377_10618056 Ga0157377_106180561 97
76 3300025907 Ga0207645_10001792 Ga0207645_1000179218 97
77 3300025911 Ga0207654_10000002 Ga0207654_10000002981 97
78 3300025911 Ga0207654_10004434 Ga0207654_100044344 97
79 3300025918 Ga0207662_10839219 Ga0207662_108392191 97
80 3300025924 Ga0207694_11091262 Ga0207694_110912622 97
81 3300025927 Ga0207687_10000001 Ga0207687_100000011019 97
82 3300025927 Ga0207687_10809085 Ga0207687_108090852 97
83 3300025927 Ga0207687_10922685 Ga0207687_109226852 97
84 3300025935 Ga0207709_10014816 Ga0207709_100148162 97
85 3300025936 Ga0207670_11166659 Ga0207670_111666592 97
86 3300025942 Ga0207689_10291925 Ga0207689_102919251 97
87 3300025944 Ga0207661_10000021 Ga0207661_1000002187 97
88 3300025944 Ga0207661_10500611 Ga0207661_105006112 97
89 3300025944 Ga0207661_10551861 Ga0207661_105518612 97
90 3300025949 Ga0207667_10000008 Ga0207667_1000000873 97
91 3300025949 Ga0207667_10223745 Ga0207667_102237452 97
92 3300025961 Ga0207712_10002267 Ga0207712_1000226711 97
93 3300025986 Ga0207658_10022965 Ga0207658_100229655 97
94 3300026067 Ga0207678_10344032 Ga0207678_103440322 97
95 3300026075 Ga0207708_10165519 Ga0207708_101655192 97
96 3300026078 Ga0207702_10000001 Ga0207702_10000001771 97
97 3300026078 Ga0207702_11227562 Ga0207702_112275622 97
98 3300026116 Ga0207674_10826817 Ga0207674_108268172 97
99 3300026121 Ga0207683_10016483 Ga0207683_100164834 97
100 3300027866 Ga0209813_10000004 Ga0209813_10000004107 97
101 3300028556 Ga0265337_1000001 Ga0265337_1000001150 97
102 3300028800 Ga0265338_10029039 Ga0265338_100290396 97
103 3300037418 Ga0395900_0507139 Ga0395900_0507139_549_842 97
104 3300038443 Ga0395901_0207363 Ga0395901_0207363_1644_1937 97
105 3300041459 Ga0451800_0975537 Ga0451800_0975537_345_638 97
106 3300041486 Ga0451807_2214151 Ga0451807_2214151_225_518 97
107 3300046536 Ga0495587_0257213 Ga0495587_0257213_491_784 97
108 3300046557 Ga0495622_0000082 Ga0495622_0000082_35165_35458 97
109 3300046642 Ga0495634_0643266 Ga0495634_0643266_128_421 97
110 3300046683 Ga0495658_0002154 Ga0495658_0002154_3652_3945 97
111 3300046809 Ga0495600_0007672 Ga0495600_0007672_514_807 97
112 3300047470 Ga0495681_0098884 Ga0495681_0098884_523_816 97
113 3300047673 Ga0495593_0160293 Ga0495593_0160293_653_946 97
114 3300048088 Ga0495602_0323661 Ga0495602_0323661_512_805 97
115 3300048088 Ga0495602_0780244 Ga0495602_0780244_98_391 97
116 3300048918 Ga0496115_0429784 Ga0496115_0429784_306_599 97
117 3300049580 Ga0501046_0123233 Ga0501046_0123233_702_995 97
118 3300049744 Ga0501083_0088230 Ga0501083_0088230_210_503 97
119 3300050490 nmdc:mga03n38_22_c1 nmdc:mga03n38_22_c1_37748_38041 97
120 3300050491 nmdc:mga00v17_19482_c1 nmdc:mga00v17_19482_c1_2598_2891 97
121 3300050491 nmdc:mga00v17_3576_c1 nmdc:mga00v17_3576_c1_492_785 97
122 3300050491 nmdc:mga00v17_610033_c1 nmdc:mga00v17_610033_c1_93_386 97
123 3300050492 nmdc:mga0yw44_2_c1 nmdc:mga0yw44_2_c1_219217_219510 97
124 3300050492 nmdc:mga0yw44_50215_c1 nmdc:mga0yw44_50215_c1_1827_2120 97
125 3300050492 nmdc:mga0yw44_637400_c1 nmdc:mga0yw44_637400_c1_328_621 97
126 3300050493 nmdc:mga0k408_114_c1 nmdc:mga0k408_114_c1_26356_26649 97
127 3300050494 nmdc:mga06z11_108899_c1 nmdc:mga06z11_108899_c1_473_766 97
128 3300050494 nmdc:mga06z11_6_c1 nmdc:mga06z11_6_c1_14339_14632 97
129 3300050495 nmdc:mga04h51_4_c1 nmdc:mga04h51_4_c1_43581_43874 97
130 3300050496 nmdc:mga07m45_24272_c1 nmdc:mga07m45_24272_c1_135_428 97
131 3300050496 nmdc:mga07m45_4692_c1 nmdc:mga07m45_4692_c1_3808_4101 97
132 3300050516 nmdc:mga0sz30_174923_c1 nmdc:mga0sz30_174923_c1_571_864 97
133 3300053079 Ga0500610_0000001 Ga0500610_0000001_126346_126639 97
134 3300053087 Ga0500643_002381 Ga0500643_002381_5674_5967 97
135 3300053088 Ga0500644_0000006 Ga0500644_0000006_113995_114288 97
136 3300053088 Ga0500644_0000651 Ga0500644_0000651_6351_6644 97
137 3300053094 Ga0500566_0000001 Ga0500566_0000001_611025_611318 97
138 3300053103 Ga0500555_000002 Ga0500555_000002_543421_543714 97
139 3300053108 Ga0500562_008017 Ga0500562_008017_1234_1527 97
140 3300053118 Ga0500594_0000914 Ga0500594_0000914_5878_6171 97
141 3300053129 Ga0500628_000012 Ga0500628_000012_32895_33188 97
142 3300053131 Ga0500652_000020 Ga0500652_000020_31476_31769 97
143 3300053136 Ga0500559_0006658 Ga0500559_0006658_4233_4526 97

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02686

GatC

Glu-tRNAGln amidotransferase C subunit

34

106

0.95

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pLDDT pTM Quality
76.02 0.39 Low
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Predicted Structure (AlphaFold2)

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