F187321

General Info

Members Datasets Scaffolds Average Seq Length
142 108 284 446

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2977264416|2977267061
Length 501
Sequence DRGGEQSPEEEFQELMRRLMSGDTSGIDPEMLSRLSGMQIDPAMLQAVMNQLQGAFAGTQEGVDWSLTERQALHIANQDGLGVTTGQKTDIDQAFTLAALWLGAATTISDLPRPPRAVTRGAWVTATLPVWQELAEPVATSIADALTAALGQQAPEDMQEMIAGAGRLMRTVGGSLFATQLGHVVGRLSTEVVGGGDVGIPIMPEGDAAILPQNFADFGRDLEIPEDQLALYLATRELAHARLFRHARWLRLHVISQVRDFAHGIRVDTDALEELASRFDPSQPDELRGALESGALLPERSPEQTAALTRLENLLATIEGWVDVVTEDATSRLPSAGRIAEAVRRRRAVGGPAEQALGALVGLELRPRRMREAAAMWRAVTDAVGIEGRDALWDYPDLMPSSEDIDDPAALIARVTAASRGEAAPADEMDDALAQLLAEEAEGGRDSGADAEESGETPGSGDASGEGLLRRDLREGRSDDASGDGAGEGDEDGAPGDQRPV

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
13 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
14 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
15 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
16 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
17 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
18 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
19 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
20 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
24 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
25 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
26 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
27 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
28 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
29 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
30 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
31 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
32 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
33 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
34 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
35 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
36 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
37 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
38 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
39 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
40 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
41 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
42 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
43 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
44 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
45 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
46 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
47 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
48 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
49 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
50 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
51 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
52 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
53 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
54 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
55 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
56 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
58 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
59 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
60 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
61 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
62 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
63 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
64 2643221553 Microbacterium sp. Root553 Isolate Unclassified
65 2643221566 Microbacterium sp. Root166 Isolate Unclassified
66 2643221575 Microbacterium sp. Root61 Isolate Unclassified
67 2643221597 Microbacterium sp. Root180 Isolate Unclassified
68 2643221630 Microbacterium sp. Root322 Isolate Unclassified
69 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
70 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
71 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
72 2773857759 Microbacterium sp. 1294 Isolate Unclassified
73 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
74 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
75 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
76 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
77 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
78 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
79 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
80 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
81 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
82 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
83 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
84 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
85 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
86 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
87 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
88 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
89 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
90 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
91 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
92 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
93 2919069694 Microbacterium sp. 1154 Isolate Unclassified
94 2919395869 Microbacterium resistens 2980 Isolate Unclassified
95 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
96 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
97 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
98 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
99 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
100 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
101 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
102 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
103 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
104 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
105 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
106 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
107 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
108 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 64.79
Metatranscriptomes 1.41
Isolates 33.8

Biome Distribution

Category Percentage (%)
Aerial Root 1.41
Bulb 0
Endosphere 5.63
Nodule 0
Rhizoplane 9.86
Rhizosphere 40.14
Stem 0
Stem Tuber 0.7
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003657 3300003203 Bacteria 7210
2 Ga0006562J51391_1035460 3300003578 Bacteria 8333
3 Ga0006562J51391_1035464 3300003578 Bacteria 3230
4 Ga0070674_100076611 3300005356 Bacteria 2378
5 Ga0070659_100187327 3300005366 Bacteria 1700
6 Ga0070667_100174071 3300005367 Bacteria 1901
7 Ga0070665_100166820 3300005548 Bacteria 2204
8 Ga0068856_100152304 3300005614 Bacteria 2322
9 Ga0068852_100014924 3300005616 Bacteria 6004
10 Ga0081455_10000234 3300005937 Bacteria 71945
11 Ga0081539_10003610 3300005985 Bacteria 18697
12 Ga0075365_10036013 3300006038 Bacteria 3205
13 Ga0075365_10053014 3300006038 Bacteria 2685
14 Ga0075364_10039025 3300006051 Bacteria 3077
15 Ga0075369_10003857 3300006186 Bacteria 5497
16 Ga0075369_10019318 3300006186 Bacteria 2782
17 Ga0105244_10042258 3300009036 Bacteria 2358
18 Ga0105244_10042264 3300009036 Bacteria 2358
19 Ga0105237_10137577 3300009545 Bacteria 2437
20 Ga0171462_1003 3300013250 Bacteria 853796
21 Ga0163162_10057395 3300013306 Bacteria 3921
22 Ga0157372_10065654 3300013307 Bacteria 4075
23 Ga0157372_10191981 3300013307 Bacteria 2365
24 Ga0209646_1000092 3300025246 Bacteria 185930
25 Ga0207655_1005261 3300025728 Bacteria 8875
26 Ga0207655_1032821 3300025728 Bacteria 2366
27 Ga0207692_10002348 3300025898 Bacteria 7256
28 Ga0207669_10132788 3300025937 Bacteria 1714
29 Ga0316177_1080547 3300030731 Bacteria 3145
30 Ga0307413_10001741 3300031824 Bacteria 8505
31 Ga0307406_10000018 3300031901 Bacteria 101770
32 Ga0307406_10014567 3300031901 Bacteria 4528
33 Ga0307406_10097171 3300031901 Bacteria 1997
34 Ga0307406_10119276 3300031901 Bacteria 1831
35 Ga0307416_100086465 3300032002 Bacteria 2673
36 Ga0439449_0011381 3300042007 Bacteria 3348
37 Ga0466969_0005026 3300044656 Bacteria 7037
38 Ga0466972_0002792 3300044658 Bacteria 8658
39 Ga0466965_0021099 3300044683 Bacteria 3134
40 Ga0466966_0001922 3300044684 Bacteria 13449
41 Ga0466961_0003420 3300044693 Bacteria 9898
42 Ga0466970_0000869 3300044765 Bacteria 14599
43 Ga0466960_0016869 3300044901 Bacteria 3175
44 Ga0466959_0011142 3300045049 Bacteria 6452
45 Ga0495627_001144 3300046453 Bacteria 17131
46 Ga0495654_0038686 3300046530 Bacteria 2384
47 Ga0495645_0031561 3300046543 Bacteria 3861
48 Ga0496101_0045113 3300048904 Bacteria 3156
49 Ga0496103_0004982 3300048906 Bacteria 8011
50 Ga0496104_0104174 3300048907 Bacteria 2718
51 Ga0496105_0048629 3300048908 Bacteria 3500
52 Ga0496105_0164461 3300048908 Bacteria 1821
53 Ga0496107_0054068 3300048910 Bacteria 2897
54 Ga0496108_0017015 3300048911 Bacteria 5943
55 Ga0496108_0145424 3300048911 Bacteria 2044
56 Ga0496109_0025987 3300048912 Bacteria 5218
57 Ga0496109_0159654 3300048912 Bacteria 2112
58 Ga0496114_0007825 3300048917 Bacteria 8455
59 Ga0496114_0016031 3300048917 Bacteria 6029
60 Ga0496114_0040280 3300048917 Bacteria 3867
61 Ga0496114_0045098 3300048917 Bacteria 3661
62 Ga0496117_0000585 3300048920 Bacteria 60104
63 Ga0496117_0001216 3300048920 Bacteria 38595
64 Ga0496117_0001746 3300048920 Bacteria 29948
65 Ga0496118_0034878 3300048921 Bacteria 4097
66 Ga0496119_0000945 3300048922 Bacteria 37393
67 Ga0496119_0002840 3300048922 Bacteria 18497
68 Ga0496119_0009513 3300048922 Bacteria 8325
69 Ga0496119_0035395 3300048922 Bacteria 3273
70 Ga0496120_0001325 3300048923 Bacteria 30524
71 Ga0496120_0002582 3300048923 Bacteria 18037
72 Ga0496122_0000036 3300048925 Bacteria 312598
73 Ga0496122_0001174 3300048925 Bacteria 44774
74 Ga0496122_0012192 3300048925 Bacteria 8598
75 Ga0496122_0014550 3300048925 Bacteria 7597
76 Ga0496122_0077752 3300048925 Bacteria 2328
77 Ga0496123_0000011 3300048926 Bacteria 493925
78 Ga0496123_0020875 3300048926 Bacteria 5107
79 Ga0496123_0048211 3300048926 Bacteria 2868
80 Ga0496124_0002456 3300048927 Bacteria 24239
81 Ga0496124_0115616 3300048927 Bacteria 2152
82 Ga0496125_0000077 3300048928 Bacteria 232629
83 Ga0496125_0004641 3300048928 Bacteria 15689
84 Ga0496125_0011477 3300048928 Bacteria 8858
85 Ga0496125_0031694 3300048928 Bacteria 4707
86 Ga0496125_0032188 3300048928 Bacteria 4661
87 Ga0496125_0115608 3300048928 Bacteria 1929
88 Ga0496126_0006013 3300048929 Bacteria 13629
89 Ga0496126_0190753 3300048929 Bacteria 1736
90 Ga0501034_0001286 3300049571 Bacteria 33921
91 Ga0501038_0101173 3300049574 Bacteria 2400
92 nmdc:mga00v17_16101_c1 3300050491 Bacteria 4210
93 nmdc:mga07m45_29908_c1 3300050496 Bacteria 3015
94 nmdc:mga0sz30_5090_c1 3300050516 Bacteria 4808
95 2977267061 2977264416 Bacteria 3750737
96 2588108813 2585428157 Bacteria 3018951
97 2643732023 2643221542 Bacteria 3563959
98 2643785217 2643221553 Bacteria 3544260
99 2643848754 2643221566 Bacteria 3460379
100 2643885887 2643221575 Bacteria 4022601
101 2643997648 2643221597 Bacteria 3347721
102 2644170839 2643221630 Bacteria 3601215
103 2747951924 2747842429 Bacteria 3914386
104 2758226463 2757320536 Bacteria 3629334
105 2774380048 2773857758 Bacteria 3592392
106 2774384157 2773857759 Bacteria 2963774
107 2774399069 2773857763 Bacteria 4180068
108 2791914883 2791354901 Bacteria 8322202
109 2795787497 2795385470 Bacteria 8317180
110 2795797135 2795385472 Bacteria 6627535
111 2808630842 2808606306 Bacteria 3608896
112 2808885948 2808606368 Bacteria 3174172
113 2809227731 2808606447 Bacteria 3572005
114 2812323653 2811994872 Bacteria 4121241
115 2821270362 2821268502 Bacteria 3750023
116 2833711330 2833709550 Bacteria 4008291
117 2852634486 2852632344 Bacteria 3463163
118 2852664626 2852663356 Bacteria 4090475
119 2857720353 2857720070 Bacteria 3189373
120 2857723245 2857723135 Bacteria 4217853
121 2870630690 2870628048 Bacteria 3696012
122 2870729292 2870721527 Bacteria 9689237
123 2891327518 2891326441 Bacteria 6439512
124 2899374305 2899370129 Bacteria 6781179
125 2904511662 2904509784 Bacteria 3520416
126 2908680588 2908678064 Bacteria 3482747
127 2919071855 2919069694 Bacteria 3622919
128 2919395971 2919395869 Bacteria 3704152
129 2928091810 2928090899 Bacteria 3158267
130 2946034347 2946033335 Bacteria 3835514
131 2946043563 2946041624 Bacteria 4191385
132 2974297515 2974294766 Bacteria 3767688
133 2974326248 2974324384 Bacteria 3750535
134 2977231747 2977228692 Bacteria 3450105
135 2977237102 2977236895 Bacteria 3569373
136 2977254328 2977251589 Bacteria 2952848
137 2984545106 2984542743 Bacteria 3569378
138 2984581429 2984580707 Bacteria 3351387
139 8004185905 8004182704 Bacteria 3391155
140 8004213788 8004212874 Bacteria 2861420
141 8016257221 8016254467 Bacteria 3797036
142 8045831953 8045830549 Bacteria 4444727
143 JGI25406J46586_10003657
144 Ga0006562J51391_1035460
145 Ga0006562J51391_1035464
146 Ga0070674_100076611
147 Ga0070659_100187327
148 Ga0070667_100174071
149 Ga0070665_100166820
150 Ga0068856_100152304
151 Ga0068852_100014924
152 Ga0081455_10000234
153 Ga0081539_10003610
154 Ga0075365_10036013
155 Ga0075365_10053014
156 Ga0075364_10039025
157 Ga0075369_10003857
158 Ga0075369_10019318
159 Ga0105244_10042258
160 Ga0105244_10042264
161 Ga0105237_10137577
162 Ga0171462_1003
163 Ga0163162_10057395
164 Ga0157372_10065654
165 Ga0157372_10191981
166 Ga0209646_1000092
167 Ga0207655_1005261
168 Ga0207655_1032821
169 Ga0207692_10002348
170 Ga0207669_10132788
171 Ga0316177_1080547
172 Ga0307413_10001741
173 Ga0307406_10000018
174 Ga0307406_10014567
175 Ga0307406_10097171
176 Ga0307406_10119276
177 Ga0307416_100086465
178 Ga0439449_0011381
179 Ga0466969_0005026
180 Ga0466972_0002792
181 Ga0466965_0021099
182 Ga0466966_0001922
183 Ga0466961_0003420
184 Ga0466970_0000869
185 Ga0466960_0016869
186 Ga0466959_0011142
187 Ga0495627_001144
188 Ga0495654_0038686
189 Ga0495645_0031561
190 Ga0496101_0045113
191 Ga0496103_0004982
192 Ga0496104_0104174
193 Ga0496105_0048629
194 Ga0496105_0164461
195 Ga0496107_0054068
196 Ga0496108_0017015
197 Ga0496108_0145424
198 Ga0496109_0025987
199 Ga0496109_0159654
200 Ga0496114_0007825
201 Ga0496114_0016031
202 Ga0496114_0040280
203 Ga0496114_0045098
204 Ga0496117_0000585
205 Ga0496117_0001216
206 Ga0496117_0001746
207 Ga0496118_0034878
208 Ga0496119_0000945
209 Ga0496119_0002840
210 Ga0496119_0009513
211 Ga0496119_0035395
212 Ga0496120_0001325
213 Ga0496120_0002582
214 Ga0496122_0000036
215 Ga0496122_0001174
216 Ga0496122_0012192
217 Ga0496122_0014550
218 Ga0496122_0077752
219 Ga0496123_0000011
220 Ga0496123_0020875
221 Ga0496123_0048211
222 Ga0496124_0002456
223 Ga0496124_0115616
224 Ga0496125_0000077
225 Ga0496125_0004641
226 Ga0496125_0011477
227 Ga0496125_0031694
228 Ga0496125_0032188
229 Ga0496125_0115608
230 Ga0496126_0006013
231 Ga0496126_0190753
232 Ga0501034_0001286
233 Ga0501038_0101173
234 nmdc:mga00v17_16101_c1
235 nmdc:mga07m45_29908_c1
236 nmdc:mga0sz30_5090_c1
237 2977267061
238 2588108813
239 2643732023
240 2643785217
241 2643848754
242 2643885887
243 2643997648
244 2644170839
245 2747951924
246 2758226463
247 2774380048
248 2774384157
249 2774399069
250 2791914883
251 2795787497
252 2795797135
253 2808630842
254 2808885948
255 2809227731
256 2812323653
257 2821270362
258 2833711330
259 2852634486
260 2852664626
261 2857720353
262 2857723245
263 2870630690
264 2870729292
265 2891327518
266 2899374305
267 2904511662
268 2908680588
269 2919071855
270 2919395971
271 2928091810
272 2946034347
273 2946043563
274 2974297515
275 2974326248
276 2977231747
277 2977237102
278 2977254328
279 2984545106
280 2984581429
281 8004185905
282 8004213788
283 8016257221
284 8045831953

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10103

Zincin_2

Zincin-like metallopeptidase

63

412

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cmn-assembly1.cif.gz_A crystal structure of a putative hydrolase with a novel fold from chloroflexus aurantiacus 0.8247 41 396
3cmn-assembly1.cif.gz_A crystal structure of a putative hydrolase with a novel fold from chloroflexus aurantiacus 0.8199 41 396
1xm5-assembly1.cif.gz_A crystal structure of metal-dependent hydrolase ybey from e. coli, pfam upf0054 0.6282 182 238
7cbc-assembly2.cif.gz_B crystal structure of a de novo designed switch protein caging a hemagglutinin binder 0.285 69 392
7wyu-assembly1.cif.gz_A cryo-em structure of na+,k+-atpase in the e2p state formed by atp 0.283 142 373
ID Description Score Start End Superfamily
af_O53341_85_215_1.20.150.30 Mainly Alpha;Up-down Bundle;Lysin;Zincin-like metallopeptidase, N-terminal domain 0.9133 41 172 1.20.150.30
af_O53341_85_215_1.20.150.30 Mainly Alpha;Up-down Bundle;Lysin;Zincin-like metallopeptidase, N-terminal domain 0.8936 41 172 1.20.150.30
1oz9A00 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.6134 182 239 3.40.390.30
af_Q2FY02_5_155_3.40.390.30 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.6128 182 239 3.40.390.30
1oz9A00 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.2621 182 239 3.40.390.30
ID Description Score Start End GO Terms
AF-A0A3E2D363-F1-model_v4 deleted 0.9344 275 378
AF-A0A7C6R9A9-F1-model_v4 Zinc-dependent metalloprotease 0.918 99 414 GO:0006508
GO:0008237
AF-A0A847CPC5-F1-model_v4 Zinc-dependent metalloprotease 0.9098 29 203 GO:0006508
GO:0008237
AF-A0A6L9SQE2-F1-model_v4 Hydrolase 0.9066 39 378 GO:0016787
AF-A0A086ZGJ8-F1-model_v4 Hydrolase 0.9062 39 378

Map