F187313

General Info

Members Datasets Scaffolds Average Seq Length
142 117 284 367

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2939657138|2939657756
Length 389
Sequence LLAGGGTAGHVNPLLATADRIRERHPDATVLVIGTREGLEARLVPERGYELLTVARLPFPRRLGRAAVRFPVALRDAVADTRQMIRDRGVDVVVGFGGYASAPAYLAAWREKVPLVVHEANAKPGIANRLGSRITKYVGVAFSSTRLAHATLVGMPLRSEVERLDRRAERAAAIAYFDLDPSKPTLLVTGGSSGARHINETVSNAIALILGAGWQVVHIAGEKSQITDPGLAGYRLLPYCNRMELAIAVADLAVSRAGSATVSEFSAIGVPAVYIPYPVGNGEQRFNAKDAVAAGGALLVSDAEFTPDWVLQSLVPLLQDRALIAEMAARVTGVGVLDGADRMVDLVDRAVAETPVTATTEEPASTDASEHSNDTGHPDDPEHPHDTER

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
12 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
13 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
14 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
15 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
16 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
17 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
18 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
19 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
20 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
21 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
29 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
30 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
31 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
32 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
33 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
36 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
37 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
38 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
39 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
40 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
41 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
42 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
43 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
44 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
45 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
46 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
47 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
48 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
49 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
50 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
51 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
52 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
53 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
54 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
55 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
56 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
57 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
58 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
59 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
60 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
61 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
62 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
63 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
75 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
76 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
77 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
78 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
79 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
80 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
81 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
87 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
88 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
89 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
90 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
91 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
92 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
93 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
94 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
95 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
97 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
98 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
99 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
100 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
101 2643221711 Terrabacter sp. Root85 Isolate Unclassified
102 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
103 2808606372 Agromyces sp. 23-23 Isolate Unclassified
104 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
105 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
106 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
107 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
108 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
109 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
110 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
111 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
112 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
113 2919395869 Microbacterium resistens 2980 Isolate Unclassified
114 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
115 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
116 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
117 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.51
Metatranscriptomes 1.41
Isolates 14.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.75
Nodule 0
Rhizoplane 18.31
Rhizosphere 60.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1020074 3300003578 Bacteria 4250
2 Ga0006562J51391_1020080 3300003578 Bacteria 1620
3 Ga0070658_10000616 3300005327 Bacteria 30727
4 Ga0070683_100078020 3300005329 Bacteria 3098
5 Ga0070660_100136569 3300005339 Bacteria 1965
6 Ga0070668_100017981 3300005347 Bacteria 5303
7 Ga0070659_100030070 3300005366 Bacteria 4202
8 Ga0070667_100061366 3300005367 Bacteria 3183
9 Ga0070705_100004953 3300005440 Bacteria 6487
10 Ga0068855_100034288 3300005563 Bacteria 6055
11 Ga0068857_100183678 3300005577 Bacteria 1903
12 Ga0070702_100001571 3300005615 Bacteria 9415
13 Ga0105243_10030116 3300009148 Bacteria 4177
14 Ga0105242_10007807 3300009176 Bacteria 8234
15 Ga0105242_10088947 3300009176 Bacteria 2595
16 Ga0157371_10007540 3300013102 Bacteria 8797
17 Ga0157370_10013706 3300013104 Bacteria 8334
18 Ga0157369_10004048 3300013105 Bacteria 17368
19 Ga0157378_10026130 3300013297 Bacteria 5147
20 Ga0163162_10116699 3300013306 Bacteria 2770
21 Ga0157375_10005391 3300013308 Bacteria 11116
22 Ga0157380_10054542 3300014326 Bacteria 3172
23 Ga0207705_10000006 3300025909 Bacteria 657147
24 Ga0207707_10341046 3300025912 Bacteria 1292
25 Ga0207690_10034246 3300025932 Bacteria 3271
26 Ga0207661_10097144 3300025944 Bacteria 2466
27 Ga0207661_10101714 3300025944 Bacteria 2415
28 Ga0207658_10038770 3300025986 Bacteria 3435
29 Ga0207674_10183854 3300026116 Bacteria 2041
30 Ga0307515_10219841 3300028794 Bacteria 1721
31 Ga0316578_10002169 3300031728 Bacteria 8468
32 Ga0307410_10015026 3300031852 Bacteria 4578
33 Ga0307407_10058588 3300031903 Bacteria 2239
34 Ga0307409_100021102 3300031995 Bacteria 4457
35 Ga0307416_100468987 3300032002 Bacteria 1316
36 Ga0316585_10013598 3300032137 Bacteria 2424
37 Ga0316574_0006676 3300035398 Bacteria 6262
38 Ga0316582_0040622 3300036647 Bacteria 2904
39 Ga0316584_0040193 3300036712 Bacteria 3484
40 Ga0395898_0014168 3300037466 Bacteria 8199
41 Ga0395898_0041364 3300037466 Bacteria 4553
42 Ga0395901_0078233 3300038443 Bacteria 3453
43 Ga0395901_0260148 3300038443 Bacteria 1806
44 Ga0451793_0964644 3300041452 Bacteria 1571
45 Ga0451793_1282477 3300041452 Bacteria 2081
46 Ga0451793_1860220 3300041452 Bacteria 2476
47 Ga0466963_0255225 3300044694 Bacteria 1231
48 Ga0466970_0039963 3300044765 Bacteria 2490
49 Ga0466960_0147043 3300044901 Bacteria 1256
50 Ga0495608_0154035 3300046511 Bacteria 1464
51 Ga0495628_0200482 3300046516 Bacteria 1504
52 Ga0495667_0104861 3300046559 Bacteria 1828
53 Ga0495602_0185671 3300048088 Bacteria 1599
54 Ga0496100_0009793 3300048903 Bacteria 5398
55 Ga0496100_0070463 3300048903 Bacteria 2332
56 Ga0496100_0093203 3300048903 Bacteria 2060
57 Ga0496101_0006205 3300048904 Bacteria 7686
58 Ga0496102_0001197 3300048905 Bacteria 23545
59 Ga0496102_0023942 3300048905 Bacteria 5427
60 Ga0496102_0287387 3300048905 Bacteria 1550
61 Ga0496103_0077737 3300048906 Bacteria 2084
62 Ga0496104_0040615 3300048907 Bacteria 4361
63 Ga0496104_0116905 3300048907 Bacteria 2559
64 Ga0496105_0007943 3300048908 Bacteria 8245
65 Ga0496105_0047108 3300048908 Bacteria 3557
66 Ga0496105_0190278 3300048908 Bacteria 1678
67 Ga0496106_0245932 3300048909 Bacteria 1429
68 Ga0496107_0041428 3300048910 Bacteria 3306
69 Ga0496108_0055041 3300048911 Bacteria 3340
70 Ga0496109_0114732 3300048912 Bacteria 2506
71 Ga0496110_0016533 3300048913 Bacteria 6160
72 Ga0496110_0051341 3300048913 Bacteria 3623
73 Ga0496111_0061422 3300048914 Bacteria 2724
74 Ga0496111_0070238 3300048914 Bacteria 2547
75 Ga0496114_0006302 3300048917 Bacteria 9337
76 Ga0496114_0014019 3300048917 Bacteria 6425
77 Ga0496117_0000601 3300048920 Bacteria 59032
78 Ga0496122_0002503 3300048925 Bacteria 25953
79 Ga0496122_0007640 3300048925 Bacteria 11940
80 Ga0496123_0008284 3300048926 Bacteria 9577
81 Ga0496123_0032540 3300048926 Bacteria 3773
82 Ga0501031_0008868 3300049568 Bacteria 6536
83 Ga0501036_0023542 3300049572 Bacteria 5189
84 Ga0501037_0009009 3300049573 Bacteria 7311
85 Ga0501038_0022653 3300049574 Bacteria 5624
86 Ga0501039_0009234 3300049575 Bacteria 7515
87 Ga0501040_0006105 3300049576 Bacteria 7814
88 Ga0501041_0002642 3300049577 Bacteria 10217
89 Ga0501041_0023247 3300049577 Bacteria 3717
90 Ga0501042_0005812 3300049578 Bacteria 7968
91 Ga0501042_0262519 3300049578 Bacteria 1247
92 Ga0501043_0131452 3300049579 Bacteria 1962
93 Ga0501046_0007506 3300049580 Bacteria 9570
94 Ga0501048_0019969 3300049582 Bacteria 4912
95 Ga0501068_0040878 3300049584 Bacteria 2785
96 Ga0501071_0002725 3300049587 Bacteria 10825
97 Ga0501072_0021800 3300049588 Bacteria 4968
98 Ga0501074_0005079 3300049590 Bacteria 9447
99 Ga0501075_0001094 3300049591 Bacteria 17459
100 Ga0501076_0004111 3300049592 Bacteria 10288
101 Ga0501077_0011738 3300049593 Bacteria 5477
102 Ga0501079_0015869 3300049741 Bacteria 5756
103 Ga0501080_0060192 3300049742 Bacteria 3534
104 Ga0501081_0009722 3300049743 Bacteria 6271
105 Ga0501035_0008904 3300049822 Bacteria 9340
106 Ga0501044_0067991 3300049823 Bacteria 3630
107 Ga0501045_0022557 3300049824 Bacteria 4508
108 Ga0495619_0136005 3300053085 Bacteria 1691
109 Ga0500643_000527 3300053087 Bacteria 26944
110 Ga0500556_0000001 3300053104 Bacteria 1135060
111 Ga0500559_0001171 3300053136 Bacteria 15721
112 Ga0500559_0013183 3300053136 Bacteria 3501
113 Ga0500559_0079554 3300053136 Bacteria 1488
114 Ga0500568_0000016 3300053139 Bacteria 217194
115 Ga0500573_0014946 3300053140 Bacteria 4395
116 Ga0500573_0030488 3300053140 Bacteria 3111
117 Ga0500573_0060680 3300053140 Bacteria 2166
118 Ga0500577_0026094 3300053142 Bacteria 1985
119 Ga0500616_0000076 3300053153 Bacteria 216836
120 Ga0501084_0005552 3300054114 Bacteria 10351
121 Ga0501082_0019564 3300060353 Bacteria 5839
122 Ga0530510_0021268 3300061734 Bacteria 4615
123 2939657756 2939657138 Bacteria 3740283
124 2643850551 2643221567 Bacteria 4163945
125 2644134309 2643221624 Bacteria 4384879
126 2644611608 2643221711 Bacteria 4865335
127 2808873710 2808606365 Bacteria 4301966
128 2808902381 2808606372 Bacteria 4649509
129 2812375247 2811994882 Bacteria 4688362
130 2819428016 2818991318 Bacteria 5266538
131 2819668457 2818991458 Bacteria 4794049
132 2819692285 2818991462 Bacteria 4320267
133 2819730041 2818991469 Bacteria 4644110
134 2852645329 2852643534 Bacteria 3013378
135 2857732503 2857729791 Bacteria 4040535
136 2857735495 2857733635 Bacteria 3532004
137 2870623322 2870622029 Bacteria 3643329
138 2919398292 2919395869 Bacteria 3704152
139 2919450744 2919446982 Bacteria 3994487
140 2928122845 2928121344 Bacteria 3972376
141 2966923336 2966921586 Bacteria 3092803
142 8057349061 8057345674 Bacteria 4160394
143 Ga0006562J51391_1020074
144 Ga0006562J51391_1020080
145 Ga0070658_10000616
146 Ga0070683_100078020
147 Ga0070660_100136569
148 Ga0070668_100017981
149 Ga0070659_100030070
150 Ga0070667_100061366
151 Ga0070705_100004953
152 Ga0068855_100034288
153 Ga0068857_100183678
154 Ga0070702_100001571
155 Ga0105243_10030116
156 Ga0105242_10007807
157 Ga0105242_10088947
158 Ga0157371_10007540
159 Ga0157370_10013706
160 Ga0157369_10004048
161 Ga0157378_10026130
162 Ga0163162_10116699
163 Ga0157375_10005391
164 Ga0157380_10054542
165 Ga0207705_10000006
166 Ga0207707_10341046
167 Ga0207690_10034246
168 Ga0207661_10097144
169 Ga0207661_10101714
170 Ga0207658_10038770
171 Ga0207674_10183854
172 Ga0307515_10219841
173 Ga0316578_10002169
174 Ga0307410_10015026
175 Ga0307407_10058588
176 Ga0307409_100021102
177 Ga0307416_100468987
178 Ga0316585_10013598
179 Ga0316574_0006676
180 Ga0316582_0040622
181 Ga0316584_0040193
182 Ga0395898_0014168
183 Ga0395898_0041364
184 Ga0395901_0078233
185 Ga0395901_0260148
186 Ga0451793_0964644
187 Ga0451793_1282477
188 Ga0451793_1860220
189 Ga0466963_0255225
190 Ga0466970_0039963
191 Ga0466960_0147043
192 Ga0495608_0154035
193 Ga0495628_0200482
194 Ga0495667_0104861
195 Ga0495602_0185671
196 Ga0496100_0009793
197 Ga0496100_0070463
198 Ga0496100_0093203
199 Ga0496101_0006205
200 Ga0496102_0001197
201 Ga0496102_0023942
202 Ga0496102_0287387
203 Ga0496103_0077737
204 Ga0496104_0040615
205 Ga0496104_0116905
206 Ga0496105_0007943
207 Ga0496105_0047108
208 Ga0496105_0190278
209 Ga0496106_0245932
210 Ga0496107_0041428
211 Ga0496108_0055041
212 Ga0496109_0114732
213 Ga0496110_0016533
214 Ga0496110_0051341
215 Ga0496111_0061422
216 Ga0496111_0070238
217 Ga0496114_0006302
218 Ga0496114_0014019
219 Ga0496117_0000601
220 Ga0496122_0002503
221 Ga0496122_0007640
222 Ga0496123_0008284
223 Ga0496123_0032540
224 Ga0501031_0008868
225 Ga0501036_0023542
226 Ga0501037_0009009
227 Ga0501038_0022653
228 Ga0501039_0009234
229 Ga0501040_0006105
230 Ga0501041_0002642
231 Ga0501041_0023247
232 Ga0501042_0005812
233 Ga0501042_0262519
234 Ga0501043_0131452
235 Ga0501046_0007506
236 Ga0501048_0019969
237 Ga0501068_0040878
238 Ga0501071_0002725
239 Ga0501072_0021800
240 Ga0501074_0005079
241 Ga0501075_0001094
242 Ga0501076_0004111
243 Ga0501077_0011738
244 Ga0501079_0015869
245 Ga0501080_0060192
246 Ga0501081_0009722
247 Ga0501035_0008904
248 Ga0501044_0067991
249 Ga0501045_0022557
250 Ga0495619_0136005
251 Ga0500643_000527
252 Ga0500556_0000001
253 Ga0500559_0001171
254 Ga0500559_0013183
255 Ga0500559_0079554
256 Ga0500568_0000016
257 Ga0500573_0014946
258 Ga0500573_0030488
259 Ga0500573_0060680
260 Ga0500577_0026094
261 Ga0500616_0000076
262 Ga0501084_0005552
263 Ga0501082_0019564
264 Ga0530510_0021268
265 2939657756
266 2643850551
267 2644134309
268 2644611608
269 2808873710
270 2808902381
271 2812375247
272 2819428016
273 2819668457
274 2819692285
275 2819730041
276 2852645329
277 2857732503
278 2857735495
279 2870623322
280 2919398292
281 2919450744
282 2928122845
283 2966923336
284 8057349061

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03033

Glyco_transf_28

Glycosyltransferase family 28 N-terminal domain

1

140

0.97

PF04101

Glyco_tran_28_C

Glycosyltransferase family 28 C-terminal domain

185

343

0.9

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

8

177

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.8802 9 363
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.8725 9 363
7d1i-assembly1.cif.gz_B-2 crystal structure of acinetobacter baumannii murg 0.8534 7 362
7d1i-assembly1.cif.gz_B-2 crystal structure of acinetobacter baumannii murg 0.8486 7 362
1nlm-assembly1.cif.gz_B crystal structure of murg:glcnac complex 0.846 9 364
ID Description Score Start End Superfamily
af_P9WJK9_38_202_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9848 11 166 3.40.50.2000
af_P9WJK9_36_221_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9809 9 183 3.65.10.10
3s2uA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9707 9 166 3.40.50.2000
af_P17443_6_162_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9637 9 167 3.40.50.2000
af_P17443_6_162_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9518 9 167 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A4Q4D5L1-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 0.9769 248 369 GO:0016758
AF-W7SQX9-F1-model_v4 UDP-N-acetylglucosamine-N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 0.9765 9 168 GO:0005975
GO:0016758
GO:0030259
GO:1901137
AF-A0A094RWS2-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) 0.9719 10 364 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555
AF-A0A354XR97-F1-model_v4 deleted 0.9656 8 360
AF-A0A7X9JTB6-F1-model_v4 deleted 0.9651 9 148

Map