F186196

General Info

Members Datasets Scaffolds Average Seq Length
142 122 284 967

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10000095|Ga0307508_1000009511
Length 1126
Sequence VPSERVVQAYARACDAPVDEAMDLWKQARRDEHYGSASGRPAPSPVYVNGIDNLKTGLQELYAWAGRPTVREMEQRAGGLGRLPHSTAHRIVQGQTVPRDEHQLIGFLIACGVSETDHPRWIDAWRRVLGHAPREAAPHAGRTVFPAPPAQARASGLPEQRRAGSSAEPEAVRFGVLGPVRARRGEEQIGTGSPQQRALLAALLLREGRMATAGELIDALWGEESPSQALAAVRTYASRLRKVLGPGVLVSESGGYAVRGLAEGALDLAVAQDLAAEAEKARGAGNLGHAREVLGRALALWDGEALAGVPGPYAEAQRVRLEEWRLQLLESRLDMDLEQGCHAEAVSELTALAAAHPLRERLRELLMLALYRSGRQAEALAVYADTRRLLADELGVDPRTGLKELHQRILQADPGLAQPSTPVAESAAVLVCPAQLPATVPDFTGRAAFVSGLSEVLALTEGRVMAVSSLAVHVAHEARAAFPDGQLYVDLQGAGARVAEPETVLGSFLRALGTTDSAIPDSLEERSALYRAVLAGRRVLVLLDNAHDAAQVRPLLPGTEGCAALVTSRVRMVDLAGAHLVDLDVMSPDEALSLFTKIVGAERVASERGAALDVVAACGFLPLAIRIAASRLAARRTWTVSVLAAKLGDERRRLDELQAGDLAVKATYELGYGALEPAQARAFRLLGLADGPDISLAAAAALLDLPVDETEDLLESLVDTSLVESAAPGRYRYHDLVRLYARACAERDEQPPSERDAAMSRLLDFYLATAAAVYAIERPGDRLVDDLESTVCPGLRFAGASAALDWLYSEASCLLACVRQNAGMDRLRRAIDLLWAAKDLSESGAISHQYETTTRAMCDAARASGDGRAEGRARTILADVLLDSGHIEQAEKQAQLAAELVASAHDDTAISWVLANHRGLIRLHQGQHADAKAFFDQAINGFRMLGNRPFEATSLGNLAQAHLGLGDTANAVEIAQRGLAVHAEFGRTVRLANGHYVVGIILTKAGRYTEALAQFDEALSVFRDHRQRLWEGTTYFRIAKAHLAARRPAWAAQYAEQALALRCIGGDPMRANVLTLLGHALAALGQAGRAKACWHEALDLFEQTGSTGAAELRGFIERGSEPPECP

Samples

Sample ID Description Type Environment
1 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
2 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
3 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
4 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
5 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
6 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
7 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
8 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
9 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
10 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
12 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
13 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
14 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
15 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
16 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
17 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
18 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
19 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
20 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
21 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
22 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
23 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
24 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
25 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
26 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
27 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
28 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
29 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
30 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
31 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
32 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
33 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
34 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
35 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
36 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
37 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
38 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
39 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
40 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
41 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
42 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
43 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
44 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
45 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
46 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
47 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
48 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
49 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
50 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
51 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
52 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
53 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
54 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
55 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
56 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
57 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
58 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
65 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
66 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
67 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
68 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
69 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
70 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
71 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
72 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
73 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
74 2643221670 Streptomyces sp. Root431 Isolate Unclassified
75 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
76 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
77 2643221714 Streptomyces sp. Root264 Isolate Unclassified
78 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
79 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
80 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
81 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
82 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
83 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
84 2808606448 Streptomyces sp. 193411 Isolate Unclassified
85 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
86 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
87 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
88 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
89 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
90 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
91 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
92 2862574272 Streptomyces sp. AcE210 Isolate Nodule
93 2867475112 Streptomyces sp. TM32 Isolate Unclassified
94 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
95 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
96 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
97 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
98 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
99 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
100 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
101 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
102 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
103 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
104 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
105 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
106 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
107 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
108 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
109 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
110 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
111 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
112 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
113 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
114 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
115 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
116 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
117 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
118 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
119 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
120 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
121 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
122 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 61.97
Metatranscriptomes 0
Isolates 38.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.34
Nodule 0.7
Rhizoplane 0.7
Rhizosphere 61.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307508_10000095 3300031616 Bacteria 103944
2 Ga0068855_100043538 3300005563 Bacteria 5318
3 Ga0075368_10001053 3300006042 Bacteria 8641
4 Ga0075363_100013688 3300006048 Bacteria 3943
5 Ga0075367_10005370 3300006178 Bacteria 6355
6 Ga0105251_10004265 3300009011 Bacteria 9850
7 Ga0105246_10004991 3300011119 Bacteria 8078
8 Ga0183367_1005 3300015688 Bacteria 652063
9 Ga0209758_1011728 3300025297 Bacteria 5028
10 Ga0207687_10016916 3300025927 Bacteria 4794
11 Ga0209813_10000980 3300027866 Bacteria 6391
12 Ga0307517_10005931 3300028786 Bacteria 18226
13 Ga0307515_10001178 3300028794 Bacteria 59820
14 Ga0307515_10036930 3300028794 Bacteria 7880
15 Ga0307511_10000674 3300030521 Bacteria 36372
16 Ga0307511_10034808 3300030521 Bacteria 4413
17 Ga0307512_10010795 3300030522 Bacteria 8685
18 Ga0307513_10003846 3300031456 Bacteria 20205
19 Ga0307513_10034446 3300031456 Bacteria 5683
20 Ga0307509_10002991 3300031507 Bacteria 26457
21 Ga0307509_10016504 3300031507 Bacteria 8541
22 Ga0307509_10085110 3300031507 Bacteria 3255
23 Ga0307508_10003510 3300031616 Bacteria 15798
24 Ga0307508_10007528 3300031616 Bacteria 10123
25 Ga0307508_10020266 3300031616 Bacteria 6039
26 Ga0307514_10003322 3300031649 Bacteria 15587
27 Ga0307507_10060344 3300033179 Bacteria 3542
28 Ga0307510_10004474 3300033180 Bacteria 16443
29 Ga0307510_10045183 3300033180 Bacteria 4759
30 Ga0307510_10061825 3300033180 Bacteria 3833
31 Ga0395898_0004783 3300037466 Bacteria 14732
32 Ga0395898_0101172 3300037466 Bacteria 2768
33 Ga0439436_0001307 3300041404 Bacteria 7133
34 Ga0451853_0994651 3300041512 Bacteria 5321
35 Ga0439433_0000203 3300041999 Bacteria 9634
36 Ga0439457_000411 3300042014 Bacteria 12260
37 Ga0450894_000069 3300042131 Bacteria 16165
38 Ga0450898_000590 3300042134 Bacteria 4327
39 Ga0466972_0002822 3300044658 Bacteria 8611
40 Ga0466966_0004230 3300044684 Bacteria 9474
41 Ga0466963_0008250 3300044694 Bacteria 6242
42 Ga0466970_0013127 3300044765 Bacteria 4245
43 Ga0466967_0033435 3300045976 Bacteria 4353
44 Ga0495603_0013583 3300046455 Bacteria 4926
45 Ga0495629_0006562 3300046459 Bacteria 8618
46 Ga0495629_0010342 3300046459 Bacteria 6792
47 Ga0495651_0015059 3300046462 Bacteria 5978
48 Ga0495662_0001016 3300046476 Bacteria 13762
49 Ga0495664_0000596 3300046477 Bacteria 18302
50 Ga0495594_0004113 3300046499 Bacteria 7484
51 Ga0495594_0006266 3300046499 Bacteria 6116
52 Ga0495618_0005328 3300046514 Bacteria 7850
53 Ga0495628_0042598 3300046516 Bacteria 3621
54 Ga0495652_0036816 3300046529 Bacteria 4250
55 Ga0495587_0006139 3300046536 Bacteria 7839
56 Ga0495588_0001939 3300046674 Bacteria 8835
57 Ga0495646_0005698 3300046680 Bacteria 7891
58 Ga0495658_0015249 3300046683 Bacteria 3941
59 Ga0495613_0000281 3300046689 Bacteria 47256
60 Ga0495589_0004303 3300046794 Bacteria 7609
61 Ga0495581_0024299 3300047315 Bacteria 3512
62 Ga0495636_0002009 3300047318 Bacteria 7792
63 Ga0495636_0002459 3300047318 Bacteria 7102
64 Ga0495676_0020140 3300047321 Bacteria 5862
65 Ga0495687_001308 3300047443 Bacteria 23349
66 Ga0495687_006663 3300047443 Bacteria 7015
67 Ga0495685_003895 3300047447 Bacteria 4793
68 Ga0495685_005159 3300047447 Bacteria 4254
69 Ga0495681_0000958 3300047470 Bacteria 22103
70 Ga0495686_0011133 3300047472 Bacteria 6352
71 Ga0495593_0000541 3300047673 Bacteria 21383
72 Ga0495602_0025231 3300048088 Bacteria 5753
73 Ga0495614_0001097 3300048089 Bacteria 11577
74 Ga0495614_0004274 3300048089 Bacteria 6434
75 Ga0501033_0005595 3300049570 Bacteria 9926
76 Ga0501033_0031488 3300049570 Bacteria 3985
77 Ga0501036_0048955 3300049572 Bacteria 3579
78 Ga0501038_0016728 3300049574 Bacteria 6643
79 Ga0501046_0013751 3300049580 Bacteria 6843
80 Ga0501046_0038753 3300049580 Bacteria 3822
81 Ga0501047_0051157 3300049581 Bacteria 3990
82 Ga0501035_0011106 3300049822 Bacteria 8339
83 Ga0501044_0036465 3300049823 Bacteria 5145
84 nmdc:mga06z11_2763_c1 3300050494 Bacteria 6726
85 nmdc:mga04h51_1039_c1 3300050495 Bacteria 6392
86 Ga0495619_0024540 3300053085 Bacteria 3868
87 Ga0500640_001443 3300053095 Bacteria 7212
88 Ga0500624_001670 3300053157 Bacteria 3315
89 2547408078 2547132111 Bacteria 8013147
90 2585313427 2582581314 Bacteria 11452267
91 2616695133 2616644814 Bacteria 11555299
92 2643943481 2643221587 Bacteria 7586415
93 2644388654 2643221670 Bacteria 6497041
94 2644429868 2643221677 Bacteria 7584031
95 2644437106 2643221678 Bacteria 9540101
96 2644626312 2643221714 Bacteria 9015452
97 2644628842 2643221714 Bacteria 9015452
98 2676493591 2675903060 Bacteria 10051191
99 2784588534 2784132148 Bacteria 8627943
100 2793976485 2791355406 Bacteria 11364898
101 2804847096 2802429296 Bacteria 7227771
102 2808842002 2808606359 Bacteria 9866990
103 2808920522 2808606375 Bacteria 9466072
104 2809232144 2808606448 Bacteria 8656184
105 2811848968 2808606982 Bacteria 7791042
106 2812358171 2811994879 Bacteria 9313447
107 2812480557 2811994917 Bacteria 7761064
108 2852636734 2852635781 Bacteria 8251373
109 2862181883 2862178590 Bacteria 8583590
110 2862285592 2862281513 Bacteria 9621493
111 2862513959 2862507626 Bacteria 9425308
112 2862579311 2862574272 Bacteria 10567477
113 2867475480 2867475112 Bacteria 6909112
114 2875395900 2875391855 Bacteria 7600475
115 2884704273 2884693830 Bacteria 11273186
116 2895434293 2895427314 Bacteria 13147766
117 2895448418 2895442618 Bacteria 11027144
118 2912720041 2912715099 Bacteria 9460473
119 2912724376 2912723979 Bacteria 8557534
120 2912760742 2912757875 Bacteria 7940295
121 2918504458 2918501144 Bacteria 8668083
122 2919469572 2919468124 Bacteria 9133025
123 2935393923 2935390628 Bacteria 7043367
124 2946067678 2946064051 Bacteria 8957905
125 2946075859 2946072368 Bacteria 8999607
126 2947229319 2947224130 Bacteria 9938529
127 2954007514 2954002825 Bacteria 9173742
128 2997458336 2997451912 Bacteria 8492419
129 2997601457 2997600082 Bacteria 9896405
130 3006325066 3006321560 Bacteria 8247479
131 3006488438 3006486233 Bacteria 8157040
132 3006500725 3006493962 Bacteria 8825450
133 8008578927 8008574985 Bacteria 7815457
134 8023626271 8023623736 Bacteria 8593882
135 8025414428 8025413630 Bacteria 7014048
136 8025534637 8025530807 Bacteria 8495698
137 8047902778 8047893842 Bacteria 11723082
138 8048370575 8048369669 Bacteria 11666822
139 8048388847 8048379754 Bacteria 11877923
140 8056450353 8056447290 Bacteria 7680491
141 8056668442 8056667051 Bacteria 6953971
142 8056831757 8056829672 Bacteria 9045328
143 Ga0307508_10000095
144 Ga0068855_100043538
145 Ga0075368_10001053
146 Ga0075363_100013688
147 Ga0075367_10005370
148 Ga0105251_10004265
149 Ga0105246_10004991
150 Ga0183367_1005
151 Ga0209758_1011728
152 Ga0207687_10016916
153 Ga0209813_10000980
154 Ga0307517_10005931
155 Ga0307515_10001178
156 Ga0307515_10036930
157 Ga0307511_10000674
158 Ga0307511_10034808
159 Ga0307512_10010795
160 Ga0307513_10003846
161 Ga0307513_10034446
162 Ga0307509_10002991
163 Ga0307509_10016504
164 Ga0307509_10085110
165 Ga0307508_10003510
166 Ga0307508_10007528
167 Ga0307508_10020266
168 Ga0307514_10003322
169 Ga0307507_10060344
170 Ga0307510_10004474
171 Ga0307510_10045183
172 Ga0307510_10061825
173 Ga0395898_0004783
174 Ga0395898_0101172
175 Ga0439436_0001307
176 Ga0451853_0994651
177 Ga0439433_0000203
178 Ga0439457_000411
179 Ga0450894_000069
180 Ga0450898_000590
181 Ga0466972_0002822
182 Ga0466966_0004230
183 Ga0466963_0008250
184 Ga0466970_0013127
185 Ga0466967_0033435
186 Ga0495603_0013583
187 Ga0495629_0006562
188 Ga0495629_0010342
189 Ga0495651_0015059
190 Ga0495662_0001016
191 Ga0495664_0000596
192 Ga0495594_0004113
193 Ga0495594_0006266
194 Ga0495618_0005328
195 Ga0495628_0042598
196 Ga0495652_0036816
197 Ga0495587_0006139
198 Ga0495588_0001939
199 Ga0495646_0005698
200 Ga0495658_0015249
201 Ga0495613_0000281
202 Ga0495589_0004303
203 Ga0495581_0024299
204 Ga0495636_0002009
205 Ga0495636_0002459
206 Ga0495676_0020140
207 Ga0495687_001308
208 Ga0495687_006663
209 Ga0495685_003895
210 Ga0495685_005159
211 Ga0495681_0000958
212 Ga0495686_0011133
213 Ga0495593_0000541
214 Ga0495602_0025231
215 Ga0495614_0001097
216 Ga0495614_0004274
217 Ga0501033_0005595
218 Ga0501033_0031488
219 Ga0501036_0048955
220 Ga0501038_0016728
221 Ga0501046_0013751
222 Ga0501046_0038753
223 Ga0501047_0051157
224 Ga0501035_0011106
225 Ga0501044_0036465
226 nmdc:mga06z11_2763_c1
227 nmdc:mga04h51_1039_c1
228 Ga0495619_0024540
229 Ga0500640_001443
230 Ga0500624_001670
231 2547408078
232 2585313427
233 2616695133
234 2643943481
235 2644388654
236 2644429868
237 2644437106
238 2644626312
239 2644628842
240 2676493591
241 2784588534
242 2793976485
243 2804847096
244 2808842002
245 2808920522
246 2809232144
247 2811848968
248 2812358171
249 2812480557
250 2852636734
251 2862181883
252 2862285592
253 2862513959
254 2862579311
255 2867475480
256 2875395900
257 2884704273
258 2895434293
259 2895448418
260 2912720041
261 2912724376
262 2912760742
263 2918504458
264 2919469572
265 2935393923
266 2946067678
267 2946075859
268 2947229319
269 2954007514
270 2997458336
271 2997601457
272 3006325066
273 3006488438
274 3006500725
275 8008578927
276 8023626271
277 8025414428
278 8025534637
279 8047902778
280 8048370575
281 8048388847
282 8056450353
283 8056668442
284 8056831757

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03704

BTAD

Bacterial transcriptional activator domain

266

410

0.99

PF13424

TPR_12

Tetratricopeptide repeat

907

984

0.92

PF13424

TPR_12

Tetratricopeptide repeat

990

1063

0.92

PF00931

NB-ARC

NB-ARC domain

496

659

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hvr-assembly1.cif.gz_J cryo-em structure of afsr-dependent transcription activation complex with afss promoter 0.9638 18 266
3kd7-assembly5.cif.gz_E designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.947 815 921
2wqh-assembly1.cif.gz_A-2 crystal structure of ctpr3y3 0.9418 812 921
8hvr-assembly1.cif.gz_J cryo-em structure of afsr-dependent transcription activation complex with afss promoter 0.9414 18 266
4j8e-assembly1.cif.gz_A middle domain of hsc70-interacting protein, crystal form i 0.9339 809 921
ID Description Score Start End Superfamily
3kd7D00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9473 812 921 1.25.40.10
af_Q9D4H7_242_356_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9472 812 937 1.25.40.10
3kd7E00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.947 815 921 1.25.40.10
af_I1MVQ3_259_385_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9398 815 921 1.25.40.10
3kd7C00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.934 812 921 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A444ZH54-F1-model_v4 26S proteasome regulatory subunit Rpn6 N-terminal domain-containing protein 0.9196 786 926
AF-A0A4U8YQ37-F1-model_v4 Tetratricopeptide repeat 0.9193 687 939
AF-A0A6N9YFD4-F1-model_v4 deleted 0.9115 808 926
AF-A0A846A6S0-F1-model_v4 deleted 0.9112 768 926
AF-A0A5P1F112-F1-model_v4 Uncharacterized protein 0.91 812 928 GO:0015995
GO:0016020

Map